Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=31)
VSKLSQLQTELLAALLESLSKEALIQALGEW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gyp-a3-m2-cB 31 31 1.0000 1.0000 1.0000 1.86e-13 2gyp-a3-m1-cA_2gyp-a3-m2-cB, 2gyp-a3-m1-cB_2gyp-a3-m2-cB
2 2gyp-a3-m1-cB 31 31 1.0000 1.0000 1.0000 1.86e-13 2gyp-a3-m1-cB_2gyp-a3-m2-cB
3 2gyp-a3-m1-cA 31 31 1.0000 1.0000 1.0000 1.86e-13 2gyp-a3-m1-cA_2gyp-a3-m2-cB
4 1g39-a4-m2-cD 30 30 0.9355 0.9667 0.9667 1.18e-09 1g39-a4-m2-cB_1g39-a4-m2-cD
5 1g39-a4-m2-cB 30 30 0.9355 0.9667 0.9667 1.18e-09 1g39-a4-m2-cB_1g39-a4-m2-cD
6 1f93-a2-m1-cG 27 27 0.8387 0.9630 0.9630 3.16e-07 1f93-a2-m1-cH_1f93-a2-m1-cG
7 1f93-a2-m1-cH 26 26 0.8065 0.9615 0.9615 1.85e-06 1f93-a2-m1-cH_1f93-a2-m1-cG
8 3tsy-a1-m2-cA 828 25 0.3226 0.0121 0.4000 0.89 3tsy-a1-m1-cA_3tsy-a1-m2-cA
9 3tsy-a1-m1-cA 828 25 0.3226 0.0121 0.4000 0.89 3tsy-a1-m1-cA_3tsy-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600