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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
VSKQHKAFLRKLYLAHLDDARHNLLSLGKLTGPRRTLQDAIASFADIGIEVEFVQDGERH
NAGYYRIRTWGPISSAWDTHVDEVKSLLGVDDAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ke2-a2-m2-cC 94 94 1.0000 1.0000 1.0000 5.96e-66 3ke2-a2-m1-cC_3ke2-a2-m2-cC
2 3ke2-a2-m1-cC 94 94 1.0000 1.0000 1.0000 5.96e-66 3ke2-a2-m1-cC_3ke2-a2-m2-cC
3 6qv7-a1-m4-cA 316 21 0.0957 0.0285 0.4286 0.83 6qv7-a1-m1-cA_6qv7-a1-m4-cA, 6qv7-a1-m2-cA_6qv7-a1-m4-cA, 6qv7-a1-m3-cA_6qv7-a1-m4-cA
4 6qv7-a1-m3-cA 316 21 0.0957 0.0285 0.4286 0.83 6qv7-a1-m3-cA_6qv7-a1-m4-cA
5 6qv7-a1-m2-cA 316 21 0.0957 0.0285 0.4286 0.83 6qv7-a1-m2-cA_6qv7-a1-m4-cA
6 6qv7-a1-m1-cA 316 21 0.0957 0.0285 0.4286 0.83 6qv7-a1-m1-cA_6qv7-a1-m4-cA
7 1dqx-a2-m1-cD 267 33 0.1489 0.0524 0.4242 1.4 1dqx-a2-m1-cC_1dqx-a2-m1-cD
8 1dqx-a2-m1-cC 267 33 0.1489 0.0524 0.4242 1.4 1dqx-a2-m1-cC_1dqx-a2-m1-cD
9 3c2u-a3-m1-cD 537 51 0.1489 0.0261 0.2745 3.7 3c2u-a3-m1-cC_3c2u-a3-m1-cD
10 3c2u-a3-m1-cC 537 51 0.1489 0.0261 0.2745 3.7 3c2u-a3-m1-cC_3c2u-a3-m1-cD
11 3c2u-a1-m1-cD 537 51 0.1489 0.0261 0.2745 3.7 3c2u-a1-m1-cB_3c2u-a1-m1-cD
12 3c2u-a1-m1-cB 537 51 0.1489 0.0261 0.2745 3.7 3c2u-a1-m1-cB_3c2u-a1-m1-cD
13 5x15-a1-m2-cB 199 39 0.1702 0.0804 0.4103 8.4 5x15-a1-m2-cC_5x15-a1-m2-cB
14 5x15-a1-m1-cB 199 39 0.1702 0.0804 0.4103 8.4 5x15-a1-m2-cC_5x15-a1-m1-cB
15 5x15-a1-m2-cC 198 39 0.1702 0.0808 0.4103 8.7 5x15-a1-m2-cC_5x15-a1-m1-cB, 5x15-a1-m2-cC_5x15-a1-m2-cB
16 3g9g-a1-m2-cA 250 22 0.0851 0.0320 0.3636 8.9 3g9g-a1-m1-cA_3g9g-a1-m2-cA
17 3g9g-a1-m1-cA 250 22 0.0851 0.0320 0.3636 8.9 3g9g-a1-m1-cA_3g9g-a1-m2-cA
18 5mh6-a2-m1-cD 308 38 0.1170 0.0357 0.2895 9.8 5mh6-a2-m1-cC_5mh6-a2-m1-cD
19 5mh6-a2-m1-cC 308 38 0.1170 0.0357 0.2895 9.8 5mh6-a2-m1-cC_5mh6-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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