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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=30)
VSPGVLAGIVVGDLVLTVLIALAVYFLGRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2l35-a1-m1-cA 63 30 1.0000 0.4762 1.0000 6.81e-13 2l35-a1-m1-cB_2l35-a1-m1-cA
2 4wo1-a2-m1-cC 32 30 1.0000 0.9375 1.0000 6.96e-13 4wo1-a2-m1-cB_4wo1-a2-m1-cC
3 4wo1-a2-m1-cB 32 30 1.0000 0.9375 1.0000 6.96e-13 4wo1-a2-m1-cB_4wo1-a2-m1-cC
4 4wol-a1-m1-cC 30 30 1.0000 1.0000 1.0000 8.93e-13 4wol-a1-m1-cB_4wol-a1-m1-cC
5 4wol-a1-m1-cB 30 30 1.0000 1.0000 1.0000 8.93e-13 4wol-a1-m1-cB_4wol-a1-m1-cC
6 2l35-a1-m1-cB 32 29 0.9667 0.9062 1.0000 2.00e-12 2l35-a1-m1-cB_2l35-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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