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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
VSVDVLKQLLLDIGIAEQTLTEIEPGTRLRADLGLSSVETTDLEIQLRERFGVRINLWDK
ADYTMEQLAVGIREMPRLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6lk3-a1-m1-cB 79 79 1.0000 1.0000 1.0000 1.42e-51 6lk3-a1-m1-cA_6lk3-a1-m1-cB
2 6lk3-a1-m1-cA 72 72 0.9114 1.0000 1.0000 4.77e-46 6lk3-a1-m1-cA_6lk3-a1-m1-cB
3 7en2-a1-m1-cA 1321 40 0.1899 0.0114 0.3750 4.7 7en2-a1-m1-cA_7en2-a1-m1-cB
4 7en2-a1-m1-cB 1410 40 0.1899 0.0106 0.3750 4.8 7en2-a1-m1-cA_7en2-a1-m1-cB
5 6sy1-a1-m1-cB 861 32 0.1646 0.0151 0.4062 5.2 6sy1-a1-m1-cA_6sy1-a1-m1-cB
6 6sy1-a1-m1-cA 859 32 0.1646 0.0151 0.4062 5.2 6sy1-a1-m1-cA_6sy1-a1-m1-cB
7 3gzl-a1-m2-cA 81 38 0.1519 0.1481 0.3158 6.2 3gzl-a1-m1-cA_3gzl-a1-m2-cA
8 3gzl-a1-m1-cA 81 38 0.1519 0.1481 0.3158 6.2 3gzl-a1-m1-cA_3gzl-a1-m2-cA
9 3lmo-a1-m2-cA 94 35 0.1266 0.1064 0.2857 6.5 3lmo-a1-m1-cA_3lmo-a1-m2-cA
10 3lmo-a1-m1-cA 94 35 0.1266 0.1064 0.2857 6.5 3lmo-a1-m1-cA_3lmo-a1-m2-cA
11 1qpb-a1-m2-cB 555 52 0.2152 0.0306 0.3269 8.9 1qpb-a1-m1-cA_1qpb-a1-m2-cB, 1qpb-a1-m1-cB_1qpb-a1-m2-cB
12 1qpb-a1-m2-cA 555 52 0.2152 0.0306 0.3269 8.9 1qpb-a1-m1-cA_1qpb-a1-m2-cA
13 1qpb-a1-m1-cB 555 52 0.2152 0.0306 0.3269 8.9 1qpb-a1-m1-cB_1qpb-a1-m2-cB
14 1qpb-a1-m1-cA 555 52 0.2152 0.0306 0.3269 8.9 1qpb-a1-m1-cA_1qpb-a1-m2-cA, 1qpb-a1-m1-cA_1qpb-a1-m2-cB
15 4kms-a1-m2-cA 236 22 0.0759 0.0254 0.2727 9.2 4kms-a1-m2-cB_4kms-a1-m2-cA
16 4kms-a1-m2-cB 226 22 0.0759 0.0265 0.2727 9.6 4kms-a1-m1-cB_4kms-a1-m2-cB, 4kms-a1-m2-cB_4kms-a1-m2-cA
17 4kms-a1-m1-cB 226 22 0.0759 0.0265 0.2727 9.6 4kms-a1-m1-cB_4kms-a1-m2-cB
18 5huz-a1-m1-cB 44 43 0.2152 0.3864 0.3953 9.8 5huz-a1-m1-cA_5huz-a1-m1-cB
19 5huz-a1-m1-cA 44 43 0.2152 0.3864 0.3953 9.8 5huz-a1-m1-cA_5huz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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