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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
VTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7nb0-a2-m1-cB 57 55 1.0000 0.9649 1.0000 6.94e-35 7nb0-a2-m1-cD_7nb0-a2-m1-cB
2 7nb0-a2-m1-cD 55 55 1.0000 1.0000 1.0000 7.69e-35 7nb0-a2-m1-cD_7nb0-a2-m1-cB
3 5f28-a3-m2-cD 72 51 0.5273 0.4028 0.5686 3.44e-14 5f28-a3-m2-cC_5f28-a3-m2-cD
4 5f28-a3-m2-cC 72 51 0.5273 0.4028 0.5686 3.44e-14 5f28-a3-m2-cC_5f28-a3-m2-cD
5 1mnm-a1-m1-cB 81 42 0.3636 0.2469 0.4762 3.10e-09 1mnm-a1-m1-cB_1mnm-a1-m1-cA
6 1mnm-a1-m1-cA 85 42 0.3636 0.2353 0.4762 3.74e-09 1mnm-a1-m1-cB_1mnm-a1-m1-cA
7 1hbx-a1-m1-cB 86 41 0.3455 0.2209 0.4634 1.03e-08 1hbx-a1-m1-cB_1hbx-a1-m1-cA
8 1hbx-a1-m1-cA 87 41 0.3455 0.2184 0.4634 1.07e-08 1hbx-a1-m1-cB_1hbx-a1-m1-cA
9 3ek1-a2-m1-cG 482 32 0.2364 0.0270 0.4062 0.15 3ek1-a2-m1-cG_3ek1-a2-m1-cH
10 3ek1-a2-m1-cH 483 32 0.2364 0.0269 0.4062 0.15 3ek1-a2-m1-cE_3ek1-a2-m1-cH, 3ek1-a2-m1-cF_3ek1-a2-m1-cH, 3ek1-a2-m1-cG_3ek1-a2-m1-cH
11 3ek1-a2-m1-cF 483 32 0.2364 0.0269 0.4062 0.15 3ek1-a2-m1-cF_3ek1-a2-m1-cH
12 3ek1-a2-m1-cE 483 32 0.2364 0.0269 0.4062 0.15 3ek1-a2-m1-cE_3ek1-a2-m1-cH
13 2w8p-a3-m2-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a3-m1-cA_2w8p-a3-m2-cA
14 2w8p-a3-m1-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a3-m1-cA_2w8p-a3-m2-cA
15 2w8p-a2-m2-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a2-m13-cA_2w8p-a2-m2-cA, 2w8p-a2-m14-cA_2w8p-a2-m2-cA
16 2w8p-a2-m14-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a2-m14-cA_2w8p-a2-m2-cA
17 2w8p-a2-m13-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a2-m13-cA_2w8p-a2-m2-cA
18 2w8p-a1-m9-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a1-m7-cA_2w8p-a1-m9-cA
19 2w8p-a1-m7-cA 485 32 0.2364 0.0268 0.4062 2.2 2w8p-a1-m7-cA_2w8p-a1-m9-cA
20 5doc-a1-m1-cA 197 36 0.2727 0.0761 0.4167 2.5 5doc-a1-m1-cA_5doc-a1-m1-cB
21 5doc-a1-m1-cB 202 36 0.2727 0.0743 0.4167 2.6 5doc-a1-m1-cA_5doc-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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