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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
VTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVHPGDLV
ILIAYATMDDARARTYQPRIVFVDAYNKPI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6p02-a1-m1-cH 90 90 1.0000 1.0000 1.0000 6.12e-60 6p02-a1-m1-cB_6p02-a1-m1-cH
2 6p02-a1-m1-cB 90 90 1.0000 1.0000 1.0000 6.12e-60 6p02-a1-m1-cB_6p02-a1-m1-cH
3 1vc3-a2-m4-cB 95 88 0.6444 0.6105 0.6591 1.30e-35 1vc3-a2-m3-cB_1vc3-a2-m4-cB
4 1vc3-a2-m3-cB 95 88 0.6444 0.6105 0.6591 1.30e-35 1vc3-a2-m3-cB_1vc3-a2-m4-cB
5 1aw8-a1-m2-cE 90 88 0.4444 0.4444 0.4545 3.85e-25 1aw8-a1-m2-cB_1aw8-a1-m2-cE
6 1aw8-a1-m2-cB 90 88 0.4444 0.4444 0.4545 3.85e-25 1aw8-a1-m2-cB_1aw8-a1-m2-cE
7 3plx-a1-m4-cB 100 87 0.4222 0.3800 0.4368 4.34e-23 3plx-a1-m2-cB_3plx-a1-m4-cB
8 3plx-a1-m2-cB 100 87 0.4222 0.3800 0.4368 4.34e-23 3plx-a1-m2-cB_3plx-a1-m4-cB
9 1uhe-a2-m8-cA 97 88 0.4667 0.4330 0.4773 3.41e-21 1uhe-a2-m6-cA_1uhe-a2-m8-cA
10 1uhe-a2-m6-cA 97 88 0.4667 0.4330 0.4773 3.41e-21 1uhe-a2-m6-cA_1uhe-a2-m8-cA
11 3oug-a3-m1-cI 105 81 0.3444 0.2952 0.3827 6.63e-15 3oug-a3-m1-cG_3oug-a3-m1-cI
12 3oug-a3-m1-cH 105 81 0.3444 0.2952 0.3827 6.63e-15 3oug-a3-m1-cB_3oug-a3-m1-cH
13 3oug-a3-m1-cG 105 81 0.3444 0.2952 0.3827 6.63e-15 3oug-a3-m1-cG_3oug-a3-m1-cI
14 3oug-a3-m1-cB 105 81 0.3444 0.2952 0.3827 6.63e-15 3oug-a3-m1-cB_3oug-a3-m1-cH
15 2z9x-a1-m2-cB 392 56 0.2000 0.0459 0.3214 0.78 2z9x-a1-m1-cB_2z9x-a1-m2-cB
16 2z9x-a1-m1-cB 392 56 0.2000 0.0459 0.3214 0.78 2z9x-a1-m1-cB_2z9x-a1-m2-cB
17 2z9w-a1-m2-cB 392 56 0.2000 0.0459 0.3214 0.78 2z9w-a1-m1-cA_2z9w-a1-m2-cB, 2z9w-a1-m2-cA_2z9w-a1-m2-cB
18 2z9w-a1-m2-cA 392 56 0.2000 0.0459 0.3214 0.78 2z9w-a1-m2-cA_2z9w-a1-m2-cB
19 2z9w-a1-m1-cA 392 56 0.2000 0.0459 0.3214 0.78 2z9w-a1-m1-cA_2z9w-a1-m2-cB
20 3aoe-a1-m1-cE 416 47 0.1889 0.0409 0.3617 1.6 3aoe-a1-m1-cE_3aoe-a1-m1-cF
21 3aoe-a1-m1-cD 416 47 0.1889 0.0409 0.3617 1.6 3aoe-a1-m1-cD_3aoe-a1-m1-cF
22 3aoe-a1-m1-cF 417 47 0.1889 0.0408 0.3617 1.6 3aoe-a1-m1-cD_3aoe-a1-m1-cF, 3aoe-a1-m1-cE_3aoe-a1-m1-cF
23 6c8q-a3-m1-cF 264 64 0.2333 0.0795 0.3281 4.2 6c8q-a3-m1-cD_6c8q-a3-m1-cF
24 6c8q-a3-m1-cD 264 64 0.2333 0.0795 0.3281 4.5 6c8q-a3-m1-cD_6c8q-a3-m1-cF
25 6pen-a1-m1-cE 288 61 0.1778 0.0556 0.2623 6.3 6pen-a1-m1-cF_6pen-a1-m1-cE
26 6pen-a1-m1-cC 288 61 0.1778 0.0556 0.2623 6.3 6pen-a1-m1-cC_6pen-a1-m1-cD
27 6pen-a1-m1-cD 293 61 0.1778 0.0546 0.2623 6.5 6pen-a1-m1-cC_6pen-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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