Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
VTKEQVEASLTSKLKPIHLEVIDISGGCGSSFEVEVVSEQFEGKRLLERHRMVNAALEEE
MKEIHALSIKKAQTPQQWKPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4puh-a1-m1-cB 81 81 1.0000 1.0000 1.0000 7.59e-55 4puh-a1-m1-cA_4puh-a1-m1-cB
2 4puh-a1-m1-cA 81 81 1.0000 1.0000 1.0000 7.59e-55 4puh-a1-m1-cA_4puh-a1-m1-cB
3 3o2e-a2-m2-cA 86 78 0.4938 0.4651 0.5128 9.47e-23 3o2e-a2-m1-cA_3o2e-a2-m2-cA
4 3o2e-a2-m1-cA 86 78 0.4938 0.4651 0.5128 9.47e-23 3o2e-a2-m1-cA_3o2e-a2-m2-cA
5 3tr3-a2-m1-cA 76 53 0.2840 0.3026 0.4340 7.84e-08 3tr3-a2-m1-cA_3tr3-a2-m2-cB
6 3tr3-a1-m1-cA 76 53 0.2840 0.3026 0.4340 7.84e-08 3tr3-a1-m1-cA_3tr3-a1-m1-cB
7 3tr3-a2-m2-cB 79 53 0.2840 0.2911 0.4340 8.46e-08 3tr3-a2-m1-cA_3tr3-a2-m2-cB
8 3tr3-a1-m1-cB 79 53 0.2840 0.2911 0.4340 8.46e-08 3tr3-a1-m1-cA_3tr3-a1-m1-cB
9 3ns6-a3-m1-cB 99 32 0.1235 0.1010 0.3125 1.9 3ns6-a3-m1-cA_3ns6-a3-m1-cB
10 3ns6-a3-m1-cA 99 32 0.1235 0.1010 0.3125 1.9 3ns6-a3-m1-cA_3ns6-a3-m1-cB
11 4jx2-a2-m2-cB 384 21 0.1111 0.0234 0.4286 5.1 4jx2-a2-m1-cB_4jx2-a2-m2-cB, 4jx2-a2-m2-cB_4jx2-a2-m1-cA, 4jx2-a2-m2-cB_4jx2-a2-m2-cA
12 4jx2-a2-m1-cB 384 21 0.1111 0.0234 0.4286 5.1 4jx2-a2-m1-cB_4jx2-a2-m2-cB
13 4jx2-a2-m2-cA 387 21 0.1111 0.0233 0.4286 5.1 4jx2-a2-m2-cB_4jx2-a2-m2-cA
14 4jx2-a2-m1-cA 387 21 0.1111 0.0233 0.4286 5.1 4jx2-a2-m2-cB_4jx2-a2-m1-cA
15 6mmp-a1-m1-cB 754 24 0.1235 0.0133 0.4167 7.3 6mmp-a1-m1-cB_6mmp-a1-m1-cD
16 6mmp-a1-m1-cD 756 24 0.1235 0.0132 0.4167 7.3 6mmp-a1-m1-cB_6mmp-a1-m1-cD
17 6mmi-a1-m1-cD 760 24 0.1235 0.0132 0.4167 7.3 6mmi-a1-m1-cB_6mmi-a1-m1-cD
18 6mmi-a1-m1-cB 760 24 0.1235 0.0132 0.4167 7.3 6mmi-a1-m1-cB_6mmi-a1-m1-cD
19 6fxw-a1-m4-cA 153 42 0.1358 0.0719 0.2619 8.1 6fxw-a1-m1-cA_6fxw-a1-m4-cA, 6fxw-a1-m2-cA_6fxw-a1-m4-cA, 6fxw-a1-m3-cA_6fxw-a1-m4-cA
20 6fxw-a1-m3-cA 153 42 0.1358 0.0719 0.2619 8.1 6fxw-a1-m3-cA_6fxw-a1-m4-cA
21 6fxw-a1-m2-cA 153 42 0.1358 0.0719 0.2619 8.1 6fxw-a1-m2-cA_6fxw-a1-m4-cA
22 6fxw-a1-m1-cA 153 42 0.1358 0.0719 0.2619 8.1 6fxw-a1-m1-cA_6fxw-a1-m4-cA
23 2oa2-a1-m2-cA 129 57 0.2222 0.1395 0.3158 9.0 2oa2-a1-m1-cA_2oa2-a1-m2-cA
24 2oa2-a1-m1-cA 129 57 0.2222 0.1395 0.3158 9.0 2oa2-a1-m1-cA_2oa2-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600