Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=59)
VTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1shf-a1-m2-cB 59 59 1.0000 1.0000 1.0000 1.51e-39 1shf-a1-m2-cA_1shf-a1-m2-cB
2 1shf-a1-m2-cA 59 59 1.0000 1.0000 1.0000 1.51e-39 1shf-a1-m2-cA_1shf-a1-m2-cB
3 2hda-a3-m3-cA 59 58 0.7627 0.7627 0.7759 2.52e-31 2hda-a3-m2-cA_2hda-a3-m3-cA
4 2hda-a3-m2-cA 59 58 0.7627 0.7627 0.7759 2.52e-31 2hda-a3-m2-cA_2hda-a3-m3-cA
5 2hda-a2-m6-cA 59 58 0.7627 0.7627 0.7759 2.52e-31 2hda-a2-m2-cA_2hda-a2-m6-cA
6 2hda-a2-m2-cA 59 58 0.7627 0.7627 0.7759 2.52e-31 2hda-a2-m2-cA_2hda-a2-m6-cA
7 7pvz-a1-m1-cB 60 57 0.7288 0.7167 0.7544 3.38e-27 7pvz-a1-m1-cA_7pvz-a1-m1-cB
8 7pvz-a1-m1-cA 60 57 0.7288 0.7167 0.7544 3.38e-27 7pvz-a1-m1-cA_7pvz-a1-m1-cB
9 4le9-a1-m2-cA 59 56 0.6780 0.6780 0.7143 3.97e-24 4le9-a1-m1-cA_4le9-a1-m2-cA
10 4le9-a1-m1-cA 59 56 0.6780 0.6780 0.7143 3.97e-24 4le9-a1-m1-cA_4le9-a1-m2-cA
11 1bu1-a1-m1-cE 57 58 0.5932 0.6140 0.6034 3.26e-19 1bu1-a1-m1-cC_1bu1-a1-m1-cE
12 1bu1-a1-m1-cC 56 57 0.5763 0.6071 0.5965 2.01e-18 1bu1-a1-m1-cC_1bu1-a1-m1-cE
13 4u5w-a1-m1-cD 160 57 0.5932 0.2188 0.6140 6.88e-18 4u5w-a1-m1-cD_4u5w-a1-m1-cB
14 4u5w-a1-m1-cB 163 57 0.5932 0.2147 0.6140 7.18e-18 4u5w-a1-m1-cD_4u5w-a1-m1-cB
15 2hck-a1-m1-cB 437 57 0.5932 0.0801 0.6140 6.25e-17 2hck-a1-m1-cA_2hck-a1-m1-cB
16 2hck-a1-m1-cA 437 57 0.5932 0.0801 0.6140 6.25e-17 2hck-a1-m1-cA_2hck-a1-m1-cB
17 2iim-a1-m2-cA 62 55 0.4915 0.4677 0.5273 1.34e-15 2iim-a1-m1-cA_2iim-a1-m2-cA
18 2iim-a1-m1-cA 62 55 0.4915 0.4677 0.5273 1.34e-15 2iim-a1-m1-cA_2iim-a1-m2-cA
19 1x27-a1-m1-cF 163 58 0.4915 0.1779 0.5000 1.10e-14 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
20 1x27-a1-m1-cD 163 58 0.4915 0.1779 0.5000 1.10e-14 1x27-a1-m1-cD_1x27-a1-m1-cF
21 1x27-a1-m1-cA 163 58 0.4915 0.1779 0.5000 1.10e-14 1x27-a1-m1-cA_1x27-a1-m1-cF
22 1abq-a1-m2-cA 56 58 0.4576 0.4821 0.4655 7.18e-12 1abq-a1-m1-cA_1abq-a1-m2-cA
23 1abq-a1-m1-cA 56 58 0.4576 0.4821 0.4655 7.18e-12 1abq-a1-m1-cA_1abq-a1-m2-cA
24 2d0n-a1-m1-cC 56 53 0.4237 0.4464 0.4717 2.50e-11 2d0n-a1-m1-cC_2d0n-a1-m1-cA
25 2d0n-a1-m1-cA 59 53 0.4237 0.4237 0.4717 3.03e-11 2d0n-a1-m1-cC_2d0n-a1-m1-cA
26 3eg1-a1-m1-cA 58 58 0.4407 0.4483 0.4483 6.23e-11 3eg1-a1-m1-cB_3eg1-a1-m1-cA
27 3eg1-a1-m1-cB 56 57 0.4407 0.4643 0.4561 1.25e-10 3eg1-a1-m1-cB_3eg1-a1-m1-cA
28 4xi2-a1-m2-cA 421 55 0.4407 0.0618 0.4727 2.16e-10 4xi2-a1-m1-cA_4xi2-a1-m2-cA
29 4xi2-a1-m1-cA 421 55 0.4407 0.0618 0.4727 2.16e-10 4xi2-a1-m1-cA_4xi2-a1-m2-cA
30 1opl-a3-m2-cA 451 58 0.4576 0.0599 0.4655 3.20e-10 1opl-a3-m1-cA_1opl-a3-m2-cA
31 1opl-a3-m1-cA 451 58 0.4576 0.0599 0.4655 3.20e-10 1opl-a3-m1-cA_1opl-a3-m2-cA
32 2oaw-a5-m4-cD 65 63 0.3729 0.3385 0.3492 1.89e-09 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
33 2oaw-a5-m3-cC 65 63 0.3729 0.3385 0.3492 1.89e-09 2oaw-a5-m3-cC_2oaw-a5-m4-cD
34 2oaw-a5-m1-cB 65 63 0.3729 0.3385 0.3492 1.89e-09 2oaw-a5-m1-cB_2oaw-a5-m4-cD
35 5sxp-a2-m1-cB 61 53 0.3729 0.3607 0.4151 2.68e-09 5sxp-a2-m1-cD_5sxp-a2-m1-cB
36 5sxp-a2-m1-cD 60 53 0.3729 0.3667 0.4151 2.73e-09 5sxp-a2-m1-cD_5sxp-a2-m1-cB
37 2p4r-a2-m2-cA 55 53 0.3559 0.3818 0.3962 4.77e-09 2p4r-a2-m1-cA_2p4r-a2-m2-cA
38 2p4r-a2-m1-cA 55 53 0.3559 0.3818 0.3962 4.77e-09 2p4r-a2-m1-cA_2p4r-a2-m2-cA
39 2esw-a3-m1-cB 57 53 0.3559 0.3684 0.3962 4.99e-09 2esw-a3-m1-cB_2esw-a3-m1-cA
40 2ak5-a1-m2-cA 60 53 0.3559 0.3500 0.3962 5.88e-09 2ak5-a1-m2-cA_2ak5-a1-m2-cB
41 2esw-a3-m1-cA 60 53 0.3559 0.3500 0.3962 6.08e-09 2esw-a3-m1-cB_2esw-a3-m1-cA
42 2ak5-a1-m2-cB 64 53 0.3559 0.3281 0.3962 6.58e-09 2ak5-a1-m2-cA_2ak5-a1-m2-cB
43 1z9z-a5-m5-cB 60 55 0.2881 0.2833 0.3091 7.24e-09 1z9z-a5-m1-cB_1z9z-a5-m5-cB
44 1z9z-a5-m1-cB 60 55 0.2881 0.2833 0.3091 7.24e-09 1z9z-a5-m1-cB_1z9z-a5-m5-cB
45 1z9z-a4-m4-cB 60 55 0.2881 0.2833 0.3091 7.24e-09 1z9z-a4-m1-cA_1z9z-a4-m4-cB
46 1z9z-a4-m1-cA 60 55 0.2881 0.2833 0.3091 7.24e-09 1z9z-a4-m1-cA_1z9z-a4-m4-cB
47 2sem-a1-m1-cB 59 57 0.3390 0.3390 0.3509 1.48e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
48 2sem-a1-m1-cA 58 57 0.3390 0.3448 0.3509 1.52e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
49 6a9c-a1-m1-cA 59 53 0.3729 0.3729 0.4151 3.02e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
50 5k26-a1-m1-cB 75 59 0.3390 0.2667 0.3390 3.04e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
51 6cq7-a2-m2-cA 73 59 0.3390 0.2740 0.3390 3.36e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
52 6cq7-a2-m1-cA 73 59 0.3390 0.2740 0.3390 3.36e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
53 5k26-a1-m1-cA 77 59 0.3390 0.2597 0.3390 3.46e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
54 6aqb-a1-m2-cB 70 59 0.3390 0.2857 0.3390 3.63e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
55 6aqb-a1-m1-cA 70 59 0.3390 0.2857 0.3390 3.63e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
56 6a9c-a1-m1-cB 66 53 0.3729 0.3333 0.4151 3.75e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
57 2d1x-a2-m1-cD 59 51 0.3220 0.3220 0.3725 4.75e-06 2d1x-a2-m1-cD_2d1x-a2-m1-cC
58 2d1x-a2-m1-cC 66 51 0.3220 0.2879 0.3725 6.69e-06 2d1x-a2-m1-cD_2d1x-a2-m1-cC
59 6gbu-a1-m1-cG 54 53 0.3898 0.4259 0.4340 7.80e-06 6gbu-a1-m1-cE_6gbu-a1-m1-cG
60 1jqq-a1-m1-cC 70 55 0.3390 0.2857 0.3636 7.63e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD
61 1jqq-a1-m1-cD 73 56 0.3390 0.2740 0.3571 9.02e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
62 1jqq-a1-m1-cB 82 56 0.3390 0.2439 0.3571 1.05e-04 1jqq-a1-m1-cA_1jqq-a1-m1-cB
63 1jqq-a1-m1-cA 79 56 0.3390 0.2532 0.3571 1.18e-04 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
64 1k9a-a7-m1-cC 438 55 0.3220 0.0434 0.3455 1.38e-04 1k9a-a7-m2-cD_1k9a-a7-m1-cC
65 1k9a-a7-m2-cD 433 55 0.3220 0.0439 0.3455 1.41e-04 1k9a-a7-m2-cD_1k9a-a7-m1-cC
66 1ov3-a2-m2-cB 127 56 0.2373 0.1102 0.2500 3.59e-04 1ov3-a2-m2-cB_1ov3-a2-m2-cA
67 1ov3-a2-m2-cB 127 52 0.2881 0.1339 0.3269 0.015 1ov3-a2-m2-cB_1ov3-a2-m2-cA
68 1ov3-a2-m2-cA 134 56 0.2373 0.1045 0.2500 4.09e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
69 1ov3-a2-m2-cA 134 52 0.2881 0.1269 0.3269 0.016 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
70 1ov3-a2-m1-cA 134 56 0.2373 0.1045 0.2500 4.09e-04 1ov3-a2-m1-cA_1ov3-a2-m2-cA
71 1ov3-a2-m1-cA 134 52 0.2881 0.1269 0.3269 0.016 1ov3-a2-m1-cA_1ov3-a2-m2-cA
72 6gbu-a1-m1-cE 42 47 0.3390 0.4762 0.4255 7.23e-04 6gbu-a1-m1-cE_6gbu-a1-m1-cG
73 2xkx-a1-m1-cB 718 58 0.3220 0.0265 0.3276 0.003 2xkx-a1-m1-cB_2xkx-a1-m1-cA
74 2xkx-a1-m1-cA 721 58 0.3220 0.0264 0.3276 0.003 2xkx-a1-m1-cB_2xkx-a1-m1-cA
75 1wyx-a1-m1-cA 68 56 0.3729 0.3235 0.3929 0.003 1wyx-a1-m1-cA_1wyx-a1-m1-cB
76 1wyx-a1-m1-cB 69 56 0.3729 0.3188 0.3929 0.004 1wyx-a1-m1-cA_1wyx-a1-m1-cB
77 6gbu-a1-m1-cH 63 52 0.2542 0.2381 0.2885 0.004 6gbu-a1-m1-cH_6gbu-a1-m1-cD
78 6gbu-a1-m1-cD 64 52 0.2542 0.2344 0.2885 0.005 6gbu-a1-m1-cH_6gbu-a1-m1-cD
79 3nmz-a1-m1-cD 84 55 0.2542 0.1786 0.2727 0.005 3nmz-a1-m1-cD_3nmz-a1-m1-cC
80 3nmz-a1-m1-cC 85 55 0.2542 0.1765 0.2727 0.005 3nmz-a1-m1-cD_3nmz-a1-m1-cC
81 4iim-a1-m1-cB 55 53 0.2542 0.2727 0.2830 0.006 4iim-a1-m1-cB_4iim-a1-m1-cA
82 4iim-a1-m1-cA 57 53 0.2542 0.2632 0.2830 0.007 4iim-a1-m1-cB_4iim-a1-m1-cA
83 7dpa-a1-m1-cD 1642 52 0.2881 0.0104 0.3269 0.021 7dpa-a1-m1-cA_7dpa-a1-m1-cD
84 7dpa-a1-m1-cA 1642 52 0.2881 0.0104 0.3269 0.021 7dpa-a1-m1-cA_7dpa-a1-m1-cD
85 1zuy-a1-m1-cB 58 56 0.2373 0.2414 0.2500 0.16 1zuy-a1-m1-cA_1zuy-a1-m1-cB
86 1zuy-a1-m1-cA 58 56 0.2373 0.2414 0.2500 0.16 1zuy-a1-m1-cA_1zuy-a1-m1-cB
87 7m4r-a1-m1-cA 360 22 0.1356 0.0222 0.3636 0.58 7m4r-a1-m1-cB_7m4r-a1-m1-cA
88 3tsw-a5-m1-cB 194 56 0.3051 0.0928 0.3214 0.63 3tsw-a5-m1-cB_3tsw-a5-m1-cD
89 3tsw-a5-m1-cD 199 56 0.3051 0.0905 0.3214 0.64 3tsw-a5-m1-cB_3tsw-a5-m1-cD
90 7m4r-a1-m1-cB 270 22 0.1356 0.0296 0.3636 0.67 7m4r-a1-m1-cB_7m4r-a1-m1-cA
91 4f1l-a6-m1-cC 187 21 0.1864 0.0588 0.5238 2.4 4f1l-a6-m1-cB_4f1l-a6-m1-cC
92 4f1l-a6-m1-cB 181 21 0.1864 0.0608 0.5238 2.4 4f1l-a6-m1-cB_4f1l-a6-m1-cC
93 4m28-a2-m2-cA 483 18 0.1525 0.0186 0.5000 4.6 4m28-a2-m1-cA_4m28-a2-m2-cA
94 4m28-a2-m1-cA 483 18 0.1525 0.0186 0.5000 4.6 4m28-a2-m1-cA_4m28-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600