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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
VTNEKGQAYTEMLQLFNLLQQWNDFYTAENANNLLVACQQLLINYNEPVIKFINDENEDK
SLLQYLAGDDGLAQWQFYKGFYNNYNVHIF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8ej5-a1-m1-cD 90 90 1.0000 1.0000 1.0000 1.55e-61 8ej5-a1-m1-cC_8ej5-a1-m1-cD
2 8ej5-a1-m1-cC 90 90 1.0000 1.0000 1.0000 1.55e-61 8ej5-a1-m1-cB_8ej5-a1-m1-cC, 8ej5-a1-m1-cC_8ej5-a1-m1-cD
3 8ej5-a1-m1-cB 90 90 1.0000 1.0000 1.0000 1.55e-61 8ej5-a1-m1-cB_8ej5-a1-m1-cC
4 3li9-a2-m2-cA 254 47 0.1667 0.0591 0.3191 7.7 3li9-a2-m1-cA_3li9-a2-m2-cA
5 3li9-a2-m1-cA 254 47 0.1667 0.0591 0.3191 7.7 3li9-a2-m1-cA_3li9-a2-m2-cA
6 4ubf-a1-m1-cB 319 41 0.1444 0.0408 0.3171 9.8 4ubf-a1-m1-cA_4ubf-a1-m1-cB
7 3ccy-a1-m2-cA 186 24 0.1000 0.0484 0.3750 9.9 3ccy-a1-m1-cA_3ccy-a1-m2-cA
8 3ccy-a1-m1-cA 186 24 0.1000 0.0484 0.3750 9.9 3ccy-a1-m1-cA_3ccy-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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