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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
VTVDQDLLDAAGILPFEQVDIYDITNGARLTTYALPGERGSGVIGINGAAAHLVKPGDLV
ILVAYGVFDEEEARNLKPTVVLVDERNRILEVRKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vc3-a2-m4-cB 95 95 1.0000 1.0000 1.0000 1.06e-63 1vc3-a2-m3-cB_1vc3-a2-m4-cB
2 1vc3-a2-m3-cB 95 95 1.0000 1.0000 1.0000 1.06e-63 1vc3-a2-m3-cB_1vc3-a2-m4-cB
3 6p02-a1-m1-cH 90 88 0.6105 0.6444 0.6591 1.37e-35 6p02-a1-m1-cB_6p02-a1-m1-cH
4 6p02-a1-m1-cB 90 88 0.6105 0.6444 0.6591 1.37e-35 6p02-a1-m1-cB_6p02-a1-m1-cH
5 1aw8-a1-m2-cE 90 89 0.4421 0.4667 0.4719 2.09e-27 1aw8-a1-m2-cB_1aw8-a1-m2-cE
6 1aw8-a1-m2-cB 90 89 0.4421 0.4667 0.4719 2.09e-27 1aw8-a1-m2-cB_1aw8-a1-m2-cE
7 3plx-a1-m4-cB 100 87 0.4316 0.4100 0.4713 4.73e-25 3plx-a1-m2-cB_3plx-a1-m4-cB
8 3plx-a1-m2-cB 100 87 0.4316 0.4100 0.4713 4.73e-25 3plx-a1-m2-cB_3plx-a1-m4-cB
9 1uhe-a2-m8-cA 97 91 0.4316 0.4227 0.4505 6.04e-21 1uhe-a2-m6-cA_1uhe-a2-m8-cA
10 1uhe-a2-m6-cA 97 91 0.4316 0.4227 0.4505 6.04e-21 1uhe-a2-m6-cA_1uhe-a2-m8-cA
11 3oug-a3-m1-cI 105 81 0.2947 0.2667 0.3457 1.60e-10 3oug-a3-m1-cG_3oug-a3-m1-cI
12 3oug-a3-m1-cH 105 81 0.2947 0.2667 0.3457 1.60e-10 3oug-a3-m1-cB_3oug-a3-m1-cH
13 3oug-a3-m1-cG 105 81 0.2947 0.2667 0.3457 1.60e-10 3oug-a3-m1-cG_3oug-a3-m1-cI
14 3oug-a3-m1-cB 105 81 0.2947 0.2667 0.3457 1.60e-10 3oug-a3-m1-cB_3oug-a3-m1-cH
15 2z9x-a1-m2-cB 392 30 0.1368 0.0332 0.4333 0.65 2z9x-a1-m1-cB_2z9x-a1-m2-cB
16 2z9x-a1-m1-cB 392 30 0.1368 0.0332 0.4333 0.65 2z9x-a1-m1-cB_2z9x-a1-m2-cB
17 2z9w-a1-m2-cB 392 30 0.1368 0.0332 0.4333 0.65 2z9w-a1-m1-cA_2z9w-a1-m2-cB, 2z9w-a1-m2-cA_2z9w-a1-m2-cB
18 2z9w-a1-m2-cA 392 30 0.1368 0.0332 0.4333 0.65 2z9w-a1-m2-cA_2z9w-a1-m2-cB
19 2z9w-a1-m1-cA 392 30 0.1368 0.0332 0.4333 0.65 2z9w-a1-m1-cA_2z9w-a1-m2-cB
20 7cyi-a2-m1-cC 375 32 0.1474 0.0373 0.4375 0.70 7cyi-a2-m1-cB_7cyi-a2-m1-cC
21 7cyi-a2-m1-cB 375 32 0.1474 0.0373 0.4375 0.70 7cyi-a2-m1-cB_7cyi-a2-m1-cC
22 6pen-a1-m1-cE 288 73 0.2000 0.0660 0.2603 1.0 6pen-a1-m1-cF_6pen-a1-m1-cE
23 6pen-a1-m1-cC 288 73 0.2000 0.0660 0.2603 1.0 6pen-a1-m1-cC_6pen-a1-m1-cD
24 6pen-a1-m1-cD 293 73 0.2000 0.0648 0.2603 1.1 6pen-a1-m1-cC_6pen-a1-m1-cD
25 1iug-a1-m1-cB 347 31 0.1158 0.0317 0.3548 3.0 1iug-a1-m1-cA_1iug-a1-m1-cB
26 1iug-a1-m1-cA 347 31 0.1158 0.0317 0.3548 3.0 1iug-a1-m1-cA_1iug-a1-m1-cB
27 6bii-a1-m1-cB 332 39 0.1474 0.0422 0.3590 5.7 6bii-a1-m1-cA_6bii-a1-m1-cB
28 6bii-a1-m1-cA 332 39 0.1474 0.0422 0.3590 5.7 6bii-a1-m1-cA_6bii-a1-m1-cB
29 7kh2-a2-m1-cB 406 33 0.1263 0.0296 0.3636 6.5 7kh2-a2-m1-cB_7kh2-a2-m1-cD
30 7kh2-a2-m1-cD 411 33 0.1263 0.0292 0.3636 6.6 7kh2-a2-m1-cB_7kh2-a2-m1-cD
31 3t3o-a1-m2-cA 553 32 0.1368 0.0235 0.4062 8.8 3t3o-a1-m1-cA_3t3o-a1-m2-cA
32 3t3o-a1-m1-cA 553 32 0.1368 0.0235 0.4062 8.8 3t3o-a1-m1-cA_3t3o-a1-m2-cA
33 4ynz-a1-m1-cA 313 16 0.1053 0.0319 0.6250 9.7 4ynz-a1-m1-cA_4ynz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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