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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
VVAAAEKTKQGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGA
GSIAAATGFVKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8cz3-a1-m1-cN 72 72 1.0000 1.0000 1.0000 7.48e-41 8cz3-a1-m1-cM_8cz3-a1-m1-cN
2 8cz3-a1-m1-cM 72 72 1.0000 1.0000 1.0000 7.48e-41 8cz3-a1-m1-cM_8cz3-a1-m1-cN
3 8cys-a1-m1-cO 72 72 1.0000 1.0000 1.0000 7.48e-41 8cys-a1-m1-cN_8cys-a1-m1-cO
4 8cys-a1-m1-cN 72 72 1.0000 1.0000 1.0000 7.48e-41 8cys-a1-m1-cN_8cys-a1-m1-cO
5 7v4b-a1-m1-cF 80 77 1.0000 0.9000 0.9351 3.89e-38 7v4b-a1-m1-cC_7v4b-a1-m1-cF, 7v4b-a1-m1-cD_7v4b-a1-m1-cF
6 7v4b-a1-m1-cD 80 77 1.0000 0.9000 0.9351 3.89e-38 7v4b-a1-m1-cD_7v4b-a1-m1-cF
7 7v4b-a1-m1-cC 80 77 1.0000 0.9000 0.9351 3.89e-38 7v4b-a1-m1-cC_7v4b-a1-m1-cF
8 8ads-a1-m1-cJ 75 74 0.9861 0.9467 0.9595 7.69e-38 8ads-a1-m1-cI_8ads-a1-m1-cJ
9 8ads-a1-m1-cI 75 74 0.9861 0.9467 0.9595 7.69e-38 8ads-a1-m1-cI_8ads-a1-m1-cJ
10 2n0a-a1-m1-cJ 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cH_2n0a-a1-m1-cJ, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
11 2n0a-a1-m1-cI 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
12 2n0a-a1-m1-cH 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cG_2n0a-a1-m1-cH, 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cH_2n0a-a1-m1-cJ
13 2n0a-a1-m1-cG 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cE_2n0a-a1-m1-cG, 2n0a-a1-m1-cF_2n0a-a1-m1-cG, 2n0a-a1-m1-cG_2n0a-a1-m1-cH
14 2n0a-a1-m1-cF 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cF_2n0a-a1-m1-cG
15 2n0a-a1-m1-cE 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cC_2n0a-a1-m1-cE, 2n0a-a1-m1-cD_2n0a-a1-m1-cE, 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cE_2n0a-a1-m1-cG
16 2n0a-a1-m1-cD 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cD_2n0a-a1-m1-cE
17 2n0a-a1-m1-cC 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cB_2n0a-a1-m1-cC, 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cC_2n0a-a1-m1-cE
18 2n0a-a1-m1-cB 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cA_2n0a-a1-m1-cB, 2n0a-a1-m1-cB_2n0a-a1-m1-cC
19 2n0a-a1-m1-cA 140 83 1.0000 0.5143 0.8675 2.04e-37 2n0a-a1-m1-cA_2n0a-a1-m1-cB
20 8adw-a1-m1-cJ 99 72 0.9444 0.6869 0.9444 2.52e-37 8adw-a1-m1-cI_8adw-a1-m1-cJ
21 8adw-a1-m1-cI 99 72 0.9444 0.6869 0.9444 2.52e-37 8adw-a1-m1-cI_8adw-a1-m1-cJ
22 6xyo-a1-m1-cJ 79 72 0.9444 0.8608 0.9444 2.76e-37 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
23 6xyo-a1-m1-cF 79 72 0.9444 0.8608 0.9444 2.76e-37 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
24 8a9l-a1-m3-cA 70 66 0.9028 0.9286 0.9848 1.04e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
25 8a9l-a1-m1-cA 70 66 0.9028 0.9286 0.9848 1.04e-36 8a9l-a1-m1-cA_8a9l-a1-m3-cA
26 8fpt-a1-m1-cJ 74 68 0.9167 0.8919 0.9706 1.10e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ, 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
27 8fpt-a1-m1-cH 74 68 0.9167 0.8919 0.9706 1.10e-36 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
28 8fpt-a1-m1-cG 74 68 0.9167 0.8919 0.9706 1.10e-36 8fpt-a1-m1-cG_8fpt-a1-m1-cJ
29 8aex-a1-m1-cI 71 72 0.9583 0.9718 0.9583 1.51e-36 8aex-a1-m1-cE_8aex-a1-m1-cI
30 8aex-a1-m1-cE 71 72 0.9583 0.9718 0.9583 1.51e-36 8aex-a1-m1-cE_8aex-a1-m1-cI
31 6l1u-a1-m1-cB 99 82 0.9722 0.7071 0.8537 1.59e-35 6l1u-a1-m1-cA_6l1u-a1-m1-cB
32 6l1u-a1-m1-cA 99 82 0.9722 0.7071 0.8537 1.59e-35 6l1u-a1-m1-cA_6l1u-a1-m1-cB
33 6xyq-a1-m1-cE 81 69 0.9028 0.8025 0.9420 2.18e-35 6xyq-a1-m1-cC_6xyq-a1-m1-cE
34 6xyq-a1-m1-cC 81 69 0.9028 0.8025 0.9420 2.18e-35 6xyq-a1-m1-cC_6xyq-a1-m1-cE
35 6xyq-a1-m1-cF 64 62 0.8611 0.9688 1.0000 1.72e-34 6xyq-a1-m1-cB_6xyq-a1-m1-cF
36 6xyq-a1-m1-cB 64 62 0.8611 0.9688 1.0000 1.72e-34 6xyq-a1-m1-cB_6xyq-a1-m1-cF
37 7wo0-a1-m1-cT 65 63 0.8472 0.9385 0.9683 4.26e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
38 7wo0-a1-m1-cS 65 63 0.8472 0.9385 0.9683 4.26e-34 7wo0-a1-m1-cS_7wo0-a1-m1-cT
39 6a6b-a1-m1-cL 63 61 0.8472 0.9683 1.0000 7.07e-34 6a6b-a1-m1-cK_6a6b-a1-m1-cL
40 6a6b-a1-m1-cK 63 61 0.8472 0.9683 1.0000 7.07e-34 6a6b-a1-m1-cK_6a6b-a1-m1-cL
41 6a6b-a1-m1-cI 63 61 0.8472 0.9683 1.0000 7.07e-34 6a6b-a1-m1-cC_6a6b-a1-m1-cI
42 6a6b-a1-m1-cC 63 61 0.8472 0.9683 1.0000 7.07e-34 6a6b-a1-m1-cC_6a6b-a1-m1-cI
43 7wnz-a1-m1-cI 65 62 0.8472 0.9385 0.9839 7.38e-34 7wnz-a1-m1-cH_7wnz-a1-m1-cI
44 7wnz-a1-m1-cH 65 62 0.8472 0.9385 0.9839 7.38e-34 7wnz-a1-m1-cH_7wnz-a1-m1-cI
45 7v4c-a1-m1-cF 62 61 0.8472 0.9839 1.0000 8.12e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF, 7v4c-a1-m1-cB_7v4c-a1-m1-cF
46 7v4c-a1-m1-cB 62 61 0.8472 0.9839 1.0000 8.12e-34 7v4c-a1-m1-cB_7v4c-a1-m1-cF
47 7v4c-a1-m1-cA 62 61 0.8472 0.9839 1.0000 8.12e-34 7v4c-a1-m1-cA_7v4c-a1-m1-cF
48 8h03-a1-m1-cF 61 61 0.8472 1.0000 1.0000 8.64e-34 8h03-a1-m1-cB_8h03-a1-m1-cF
49 8h03-a1-m1-cB 61 61 0.8472 1.0000 1.0000 8.64e-34 8h03-a1-m1-cB_8h03-a1-m1-cF
50 6cu7-a1-m1-cJ 60 60 0.8333 1.0000 1.0000 2.67e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
51 6cu7-a1-m1-cF 60 60 0.8333 1.0000 1.0000 2.67e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
52 6osm-a1-m1-cJ 60 60 0.8333 1.0000 1.0000 4.18e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
53 6osm-a1-m1-cI 60 60 0.8333 1.0000 1.0000 4.18e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
54 8h05-a1-m1-cC 60 60 0.8333 1.0000 1.0000 5.21e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
55 8h05-a1-m1-cA 60 60 0.8333 1.0000 1.0000 5.21e-33 8h05-a1-m1-cA_8h05-a1-m1-cC
56 7v4d-a1-m1-cF 58 58 0.8056 1.0000 1.0000 6.83e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
57 7v4d-a1-m1-cC 58 58 0.8056 1.0000 1.0000 6.83e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
58 8ceb-a1-m3-cC 58 58 0.8056 1.0000 1.0000 5.04e-31 8ceb-a1-m3-cA_8ceb-a1-m3-cC
59 8ceb-a1-m3-cA 58 58 0.8056 1.0000 1.0000 5.04e-31 8ceb-a1-m1-cA_8ceb-a1-m3-cA, 8ceb-a1-m3-cA_8ceb-a1-m3-cC
60 8ceb-a1-m1-cA 58 58 0.8056 1.0000 1.0000 5.04e-31 8ceb-a1-m1-cA_8ceb-a1-m3-cA
61 6l4s-a1-m1-cF 55 53 0.7222 0.9455 0.9811 3.93e-27 6l4s-a1-m1-cD_6l4s-a1-m1-cF, 6l4s-a1-m1-cE_6l4s-a1-m1-cF
62 6l4s-a1-m1-cE 55 53 0.7222 0.9455 0.9811 3.93e-27 6l4s-a1-m1-cE_6l4s-a1-m1-cF
63 6l4s-a1-m1-cD 55 53 0.7222 0.9455 0.9811 3.93e-27 6l4s-a1-m1-cD_6l4s-a1-m1-cF
64 7lc9-a1-m1-cG 51 51 0.7083 1.0000 1.0000 2.00e-26 7lc9-a1-m1-cL_7lc9-a1-m1-cG
65 7lc9-a1-m1-cE 51 51 0.7083 1.0000 1.0000 2.00e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
66 7lc9-a1-m1-cD 51 51 0.7083 1.0000 1.0000 2.00e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
67 7e0f-a1-m1-cF 49 48 0.6528 0.9592 0.9792 5.58e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF, 7e0f-a1-m1-cE_7e0f-a1-m1-cF
68 7e0f-a1-m1-cE 49 48 0.6528 0.9592 0.9792 5.58e-24 7e0f-a1-m1-cE_7e0f-a1-m1-cF
69 7e0f-a1-m1-cC 49 48 0.6528 0.9592 0.9792 5.58e-24 7e0f-a1-m1-cC_7e0f-a1-m1-cF
70 6cu8-a1-m1-cJ 41 41 0.5694 1.0000 1.0000 1.74e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ, 6cu8-a1-m1-cH_6cu8-a1-m1-cJ, 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
71 6cu8-a1-m1-cI 41 41 0.5694 1.0000 1.0000 1.74e-19 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
72 6cu8-a1-m1-cH 41 41 0.5694 1.0000 1.0000 1.74e-19 6cu8-a1-m1-cH_6cu8-a1-m1-cJ
73 6cu8-a1-m1-cF 41 41 0.5694 1.0000 1.0000 1.74e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ
74 7lc9-a1-m1-cK 38 37 0.5139 0.9737 1.0000 4.09e-17 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
75 7lc9-a1-m1-cJ 38 37 0.5139 0.9737 1.0000 4.09e-17 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
76 7lc9-a1-m1-cL 29 29 0.4028 1.0000 1.0000 4.84e-11 7lc9-a1-m1-cL_7lc9-a1-m1-cG
77 1u2g-a1-m1-cA 378 41 0.2778 0.0529 0.4878 3.1 1u2g-a1-m1-cB_1u2g-a1-m1-cA
78 2x77-a1-m1-cA 181 21 0.1250 0.0497 0.4286 6.3 2x77-a1-m1-cB_2x77-a1-m1-cA
79 2x77-a1-m1-cB 166 22 0.1250 0.0542 0.4091 6.8 2x77-a1-m1-cB_2x77-a1-m1-cA
80 7r9b-a1-m2-cA 223 50 0.1944 0.0628 0.2800 9.2 7r9b-a1-m1-cA_7r9b-a1-m2-cA
81 7r9b-a1-m1-cA 223 50 0.1944 0.0628 0.2800 9.2 7r9b-a1-m1-cA_7r9b-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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