Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=77)
VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC
RLKKCLEMGMKMESVQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xv6-a1-m1-cB 77 77 1.0000 1.0000 1.0000 2.24e-52 7xv6-a1-m1-cB_7xv6-a1-m1-cA
2 7xv6-a1-m1-cA 84 77 1.0000 0.9167 1.0000 2.29e-52 7xv6-a1-m1-cB_7xv6-a1-m1-cA
3 7xv9-a1-m1-cB 80 77 1.0000 0.9625 1.0000 3.40e-52 7xv9-a1-m1-cA_7xv9-a1-m1-cB
4 7xv9-a1-m1-cA 80 77 1.0000 0.9625 1.0000 3.40e-52 7xv9-a1-m1-cA_7xv9-a1-m1-cB
5 6fbq-a1-m1-cB 81 73 0.6494 0.6173 0.6849 7.27e-36 6fbq-a1-m1-cA_6fbq-a1-m1-cB
6 6fbq-a1-m1-cA 80 73 0.6494 0.6250 0.6849 8.90e-36 6fbq-a1-m1-cA_6fbq-a1-m1-cB
7 6l6l-a1-m1-cA 85 73 0.5325 0.4824 0.5616 1.82e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
8 6l6l-a1-m1-cB 84 73 0.5325 0.4881 0.5616 1.92e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
9 8ifo-a1-m1-cA 76 72 0.5065 0.5132 0.5417 9.39e-24 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 8ifo-a1-m1-cB 80 72 0.5065 0.4875 0.5417 1.08e-23 8ifo-a1-m1-cA_8ifo-a1-m1-cB
11 4oln-a1-m1-cA 70 66 0.5195 0.5714 0.6061 6.64e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
12 1hcq-a2-m1-cE 74 69 0.4935 0.5135 0.5507 1.63e-22 1hcq-a2-m1-cF_1hcq-a2-m1-cE
13 4oln-a1-m1-cB 67 66 0.5195 0.5970 0.6061 1.67e-22 4oln-a1-m1-cB_4oln-a1-m1-cA
14 1hcq-a2-m1-cF 71 69 0.4935 0.5352 0.5507 2.48e-21 1hcq-a2-m1-cF_1hcq-a2-m1-cE
15 1r4i-a1-m1-cA 74 68 0.4545 0.4730 0.5147 1.67e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
16 1r4i-a1-m1-cB 71 68 0.4545 0.4930 0.5147 2.13e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
17 2c7a-a1-m1-cB 76 70 0.4156 0.4211 0.4571 8.30e-18 2c7a-a1-m1-cB_2c7a-a1-m1-cA
18 2c7a-a1-m1-cA 78 70 0.4156 0.4103 0.4571 1.04e-17 2c7a-a1-m1-cB_2c7a-a1-m1-cA
19 2aus-a5-m3-cB 53 35 0.1558 0.2264 0.3429 1.7 2aus-a5-m1-cB_2aus-a5-m3-cB
20 2aus-a5-m1-cB 53 35 0.1558 0.2264 0.3429 1.7 2aus-a5-m1-cB_2aus-a5-m3-cB
21 2aus-a1-m2-cD 53 35 0.1558 0.2264 0.3429 1.7 2aus-a1-m1-cD_2aus-a1-m2-cD
22 2aus-a1-m1-cD 53 35 0.1558 0.2264 0.3429 1.7 2aus-a1-m1-cD_2aus-a1-m2-cD
23 5ix1-a1-m1-cA 414 29 0.1299 0.0242 0.3448 4.0 5ix1-a1-m1-cA_5ix1-a1-m1-cB
24 5ix1-a1-m1-cB 419 29 0.1299 0.0239 0.3448 4.1 5ix1-a1-m1-cA_5ix1-a1-m1-cB
25 4bzi-a1-m1-cL 735 33 0.1688 0.0177 0.3939 5.6 4bzi-a1-m1-cE_4bzi-a1-m1-cL
26 4bzi-a1-m1-cE 735 33 0.1688 0.0177 0.3939 5.6 4bzi-a1-m1-cE_4bzi-a1-m1-cL
27 7rpn-a1-m2-cA 252 16 0.1299 0.0397 0.6250 9.2 7rpn-a1-m1-cA_7rpn-a1-m2-cA
28 7rpn-a1-m1-cA 252 16 0.1299 0.0397 0.6250 9.2 7rpn-a1-m1-cA_7rpn-a1-m2-cA
29 5gt5-a1-m1-cB 444 28 0.1429 0.0248 0.3929 9.2 5gt5-a1-m1-cA_5gt5-a1-m1-cB
30 5gt5-a1-m1-cA 444 28 0.1429 0.0248 0.3929 9.2 5gt5-a1-m1-cA_5gt5-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600