Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC
RLKKCLEMGMKMESVQSERKPFDV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xv6-a1-m1-cA 84 84 1.0000 1.0000 1.0000 3.10e-58 7xv6-a1-m1-cB_7xv6-a1-m1-cA
2 7xv6-a1-m1-cB 77 77 0.9167 1.0000 1.0000 2.50e-52 7xv6-a1-m1-cB_7xv6-a1-m1-cA
3 7xv9-a1-m1-cB 80 77 0.9167 0.9625 1.0000 3.01e-52 7xv9-a1-m1-cA_7xv9-a1-m1-cB
4 7xv9-a1-m1-cA 80 77 0.9167 0.9625 1.0000 3.01e-52 7xv9-a1-m1-cA_7xv9-a1-m1-cB
5 6fbq-a1-m1-cB 81 76 0.6190 0.6420 0.6842 2.89e-37 6fbq-a1-m1-cA_6fbq-a1-m1-cB
6 6fbq-a1-m1-cA 80 75 0.6190 0.6500 0.6933 4.22e-37 6fbq-a1-m1-cA_6fbq-a1-m1-cB
7 6l6l-a1-m1-cA 85 74 0.4881 0.4824 0.5541 1.03e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
8 6l6l-a1-m1-cB 84 74 0.4881 0.4881 0.5541 1.28e-26 6l6l-a1-m1-cB_6l6l-a1-m1-cA
9 8ifo-a1-m1-cB 80 75 0.4762 0.5000 0.5333 2.36e-24 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 8ifo-a1-m1-cA 76 72 0.4643 0.5132 0.5417 1.40e-23 8ifo-a1-m1-cA_8ifo-a1-m1-cB
11 4oln-a1-m1-cA 70 66 0.4762 0.5714 0.6061 8.28e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
12 1hcq-a2-m1-cE 74 69 0.4524 0.5135 0.5507 2.19e-22 1hcq-a2-m1-cF_1hcq-a2-m1-cE
13 4oln-a1-m1-cB 67 66 0.4762 0.5970 0.6061 2.47e-22 4oln-a1-m1-cB_4oln-a1-m1-cA
14 1hcq-a2-m1-cF 71 69 0.4524 0.5352 0.5507 3.37e-21 1hcq-a2-m1-cF_1hcq-a2-m1-cE
15 1r4i-a1-m1-cA 74 68 0.4167 0.4730 0.5147 2.35e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
16 1r4i-a1-m1-cB 71 68 0.4167 0.4930 0.5147 3.22e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
17 2c7a-a1-m1-cB 76 70 0.3810 0.4211 0.4571 8.81e-18 2c7a-a1-m1-cB_2c7a-a1-m1-cA
18 2c7a-a1-m1-cA 78 70 0.3810 0.4103 0.4571 1.07e-17 2c7a-a1-m1-cB_2c7a-a1-m1-cA
19 4bzi-a1-m1-cL 735 46 0.1667 0.0190 0.3043 2.3 4bzi-a1-m1-cE_4bzi-a1-m1-cL
20 4bzi-a1-m1-cE 735 46 0.1667 0.0190 0.3043 2.3 4bzi-a1-m1-cE_4bzi-a1-m1-cL
21 2aus-a5-m3-cB 53 35 0.1429 0.2264 0.3429 3.4 2aus-a5-m1-cB_2aus-a5-m3-cB
22 2aus-a5-m1-cB 53 35 0.1429 0.2264 0.3429 3.4 2aus-a5-m1-cB_2aus-a5-m3-cB
23 2aus-a1-m2-cD 53 35 0.1429 0.2264 0.3429 3.4 2aus-a1-m1-cD_2aus-a1-m2-cD
24 2aus-a1-m1-cD 53 35 0.1429 0.2264 0.3429 3.4 2aus-a1-m1-cD_2aus-a1-m2-cD
25 5ix1-a1-m1-cA 414 29 0.1190 0.0242 0.3448 5.2 5ix1-a1-m1-cA_5ix1-a1-m1-cB
26 5ix1-a1-m1-cB 419 29 0.1190 0.0239 0.3448 5.3 5ix1-a1-m1-cA_5ix1-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600