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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
VVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVG
VK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1trl-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.15e-39 1trl-a1-m1-cA_1trl-a1-m1-cB
2 1trl-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.15e-39 1trl-a1-m1-cA_1trl-a1-m1-cB
3 3tli-a1-m2-cA 316 62 1.0000 0.1962 1.0000 6.88e-37 3tli-a1-m1-cA_3tli-a1-m2-cA
4 3tli-a1-m1-cA 316 62 1.0000 0.1962 1.0000 6.88e-37 3tli-a1-m1-cA_3tli-a1-m2-cA
5 2xe4-a1-m1-cA 721 30 0.1935 0.0166 0.4000 3.1 2xe4-a1-m1-cB_2xe4-a1-m1-cA
6 5bnc-a1-m1-cB 242 19 0.1774 0.0455 0.5789 5.1 5bnc-a1-m1-cB_5bnc-a1-m1-cA
7 5bnc-a1-m1-cA 252 19 0.1774 0.0437 0.5789 5.5 5bnc-a1-m1-cB_5bnc-a1-m1-cA
8 6d1p-a1-m1-cB 779 38 0.1935 0.0154 0.3158 6.1 6d1p-a1-m1-cB_6d1p-a1-m1-cA
9 6d1p-a1-m1-cA 781 38 0.1935 0.0154 0.3158 6.1 6d1p-a1-m1-cB_6d1p-a1-m1-cA
10 7pgm-a1-m1-cB 427 26 0.1290 0.0187 0.3077 7.7 7pgm-a1-m1-cB_7pgm-a1-m1-cA
11 7pgm-a1-m1-cC 429 26 0.1290 0.0186 0.3077 7.7 7pgm-a1-m1-cC_7pgm-a1-m1-cA
12 7pgm-a1-m1-cA 447 26 0.1290 0.0179 0.3077 7.7 7pgm-a1-m1-cB_7pgm-a1-m1-cA, 7pgm-a1-m1-cC_7pgm-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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