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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
VVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFDSN
L

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tbm-a1-m1-cB 61 61 1.0000 1.0000 1.0000 3.58e-42 3tbm-a1-m1-cA_3tbm-a1-m1-cB
2 3tbm-a1-m1-cA 61 61 1.0000 1.0000 1.0000 3.58e-42 3tbm-a1-m1-cA_3tbm-a1-m1-cB
3 3tbo-a1-m2-cA 54 59 0.3770 0.4259 0.3898 1.00e-07 3tbo-a1-m1-cA_3tbo-a1-m2-cA
4 3tbo-a1-m1-cA 54 59 0.3770 0.4259 0.3898 1.00e-07 3tbo-a1-m1-cA_3tbo-a1-m2-cA
5 4f1e-a8-m1-cP 63 23 0.1967 0.1905 0.5217 0.018 4f1e-a8-m1-cO_4f1e-a8-m1-cP
6 4f1e-a8-m1-cO 62 23 0.1967 0.1935 0.5217 0.020 4f1e-a8-m1-cO_4f1e-a8-m1-cP
7 7yvz-a1-m2-cA 63 17 0.1639 0.1587 0.5882 0.28 7yvz-a1-m1-cA_7yvz-a1-m2-cA
8 7yvz-a1-m1-cA 63 17 0.1639 0.1587 0.5882 0.28 7yvz-a1-m1-cA_7yvz-a1-m2-cA
9 6grs-a1-m1-cA 578 21 0.1475 0.0156 0.4286 1.4 6grs-a1-m1-cA_6grs-a1-m1-cB
10 6grs-a1-m1-cB 587 21 0.1475 0.0153 0.4286 1.4 6grs-a1-m1-cA_6grs-a1-m1-cB
11 3s2q-a2-m2-cB 65 16 0.1639 0.1538 0.6250 1.8 3s2q-a2-m1-cA_3s2q-a2-m2-cB, 3s2q-a2-m2-cA_3s2q-a2-m2-cB
12 3s2q-a2-m2-cA 65 16 0.1639 0.1538 0.6250 1.8 3s2q-a2-m2-cA_3s2q-a2-m2-cB
13 3s2q-a2-m1-cA 65 16 0.1639 0.1538 0.6250 1.8 3s2q-a2-m1-cA_3s2q-a2-m2-cB
14 3lwt-a2-m2-cX 457 28 0.1967 0.0263 0.4286 3.5 3lwt-a2-m1-cX_3lwt-a2-m2-cX
15 3lwt-a2-m1-cX 457 28 0.1967 0.0263 0.4286 3.5 3lwt-a2-m1-cX_3lwt-a2-m2-cX
16 2w8s-a1-m1-cD 512 32 0.1967 0.0234 0.3750 6.0 2w8s-a1-m1-cB_2w8s-a1-m1-cD, 2w8s-a1-m1-cC_2w8s-a1-m1-cD
17 2w8s-a1-m1-cC 512 32 0.1967 0.0234 0.3750 6.0 2w8s-a1-m1-cC_2w8s-a1-m1-cD
18 2w8s-a1-m1-cB 512 32 0.1967 0.0234 0.3750 6.0 2w8s-a1-m1-cB_2w8s-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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