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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
VWLNGEPRPLEGKTLKEVLEEGVELKGVAVLLNEEAFLGLEVPDRPLRDGDVVEVVALQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2cu3-a1-m1-cA 60 60 1.0000 1.0000 1.0000 3.64e-35 2cu3-a1-m1-cA_2cu3-a1-m1-cB
2 2cu3-a1-m1-cB 61 60 1.0000 0.9836 1.0000 4.04e-35 2cu3-a1-m1-cA_2cu3-a1-m1-cB
3 1v25-a1-m1-cB 507 49 0.3167 0.0375 0.3878 0.33 1v25-a1-m1-cA_1v25-a1-m1-cB
4 1v25-a1-m1-cA 491 49 0.3167 0.0387 0.3878 0.34 1v25-a1-m1-cA_1v25-a1-m1-cB
5 7l8n-a1-m1-cA 151 43 0.2167 0.0861 0.3023 1.3 7l8n-a1-m1-cB_7l8n-a1-m1-cA
6 7l8n-a1-m1-cB 150 43 0.2167 0.0867 0.3023 1.4 7l8n-a1-m1-cB_7l8n-a1-m1-cA
7 7e8r-a1-m2-cA 346 55 0.2500 0.0434 0.2727 7.5 7e8r-a1-m1-cA_7e8r-a1-m2-cA
8 7e8r-a1-m1-cA 346 55 0.2500 0.0434 0.2727 7.5 7e8r-a1-m1-cA_7e8r-a1-m2-cA
9 7edb-a1-m1-cA 350 55 0.2500 0.0429 0.2727 7.6 7edb-a1-m1-cB_7edb-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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