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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
VYIRVAEVTGLNEVPEIKREIYDGNIVVADIAFIKHDKLTLDRVLKDLRQLAEDVKGDIV
GLGEDYVITPTGIKVDRNKIR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zie-a3-m1-cC 82 81 1.0000 0.9878 1.0000 3.32e-52 3zie-a3-m1-cD_3zie-a3-m1-cC
2 3zie-a3-m1-cD 81 81 1.0000 1.0000 1.0000 5.89e-52 3zie-a3-m1-cD_3zie-a3-m1-cC
3 2dgj-a3-m4-cA 244 46 0.1481 0.0492 0.2609 2.0 2dgj-a3-m1-cB_2dgj-a3-m4-cA, 2dgj-a3-m2-cA_2dgj-a3-m4-cA, 2dgj-a3-m3-cB_2dgj-a3-m4-cA
4 2dgj-a3-m2-cA 244 46 0.1481 0.0492 0.2609 2.0 2dgj-a3-m2-cA_2dgj-a3-m4-cA
5 2dgj-a1-m1-cA 244 46 0.1481 0.0492 0.2609 2.0 2dgj-a1-m1-cB_2dgj-a1-m1-cA
6 3zqs-a1-m2-cB 186 17 0.1235 0.0538 0.5882 2.3 3zqs-a1-m1-cA_3zqs-a1-m2-cB, 3zqs-a1-m2-cA_3zqs-a1-m2-cB
7 3zqs-a1-m2-cA 186 17 0.1235 0.0538 0.5882 2.3 3zqs-a1-m2-cA_3zqs-a1-m2-cB
8 3zqs-a1-m1-cA 186 17 0.1235 0.0538 0.5882 2.3 3zqs-a1-m1-cA_3zqs-a1-m2-cB
9 8bic-a1-m1-cB 323 69 0.2346 0.0588 0.2754 4.0 8bic-a1-m1-cA_8bic-a1-m1-cB
10 1gml-a2-m1-cB 152 60 0.2222 0.1184 0.3000 6.9 1gml-a2-m1-cB_1gml-a2-m1-cC
11 3zig-a2-m2-cB 83 78 0.2346 0.2289 0.2436 6.9 3zig-a2-m1-cB_3zig-a2-m2-cB
12 3zig-a2-m1-cB 83 78 0.2346 0.2289 0.2436 6.9 3zig-a2-m1-cB_3zig-a2-m2-cB
13 2yim-a2-m1-cD 355 56 0.1852 0.0423 0.2679 7.7 2yim-a2-m1-cC_2yim-a2-m1-cD
14 2yim-a2-m1-cC 355 56 0.1852 0.0423 0.2679 7.7 2yim-a2-m1-cC_2yim-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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