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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
WCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHP
LVLSYIDLSAWCYYCQAYVHHQAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3phd-a1-m1-cA 102 84 1.0000 0.8235 1.0000 2.64e-58 3phd-a1-m1-cB_3phd-a1-m1-cA, 3phd-a1-m1-cD_3phd-a1-m1-cA
2 3phd-a1-m1-cB 100 84 1.0000 0.8400 1.0000 2.77e-58 3phd-a1-m1-cB_3phd-a1-m1-cA, 3phd-a1-m1-cD_3phd-a1-m1-cB
3 3phd-a1-m1-cD 84 84 1.0000 1.0000 1.0000 5.09e-58 3phd-a1-m1-cD_3phd-a1-m1-cA, 3phd-a1-m1-cD_3phd-a1-m1-cB
4 4fip-a1-m1-cA 450 71 0.2262 0.0422 0.2676 0.019 4fip-a1-m1-cE_4fip-a1-m1-cA
5 4fip-a1-m1-cE 441 71 0.2262 0.0431 0.2676 0.024 4fip-a1-m1-cE_4fip-a1-m1-cA
6 2g45-a3-m1-cD 117 49 0.1548 0.1111 0.2653 0.59 2g45-a3-m1-cA_2g45-a3-m1-cD
7 2g45-a3-m1-cA 117 49 0.1548 0.1111 0.2653 0.59 2g45-a3-m1-cA_2g45-a3-m1-cD
8 2ekn-a3-m1-cC 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a3-m1-cA_2ekn-a3-m1-cC
9 2ekn-a3-m1-cA 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a3-m1-cA_2ekn-a3-m1-cC
10 2ekn-a2-m2-cC 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a2-m1-cB_2ekn-a2-m2-cC
11 2ekn-a2-m1-cB 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a2-m1-cB_2ekn-a2-m2-cC
12 2ekn-a1-m2-cC 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a1-m2-cB_2ekn-a1-m2-cC
13 2ekn-a1-m2-cB 145 37 0.1429 0.0828 0.3243 6.2 2ekn-a1-m2-cB_2ekn-a1-m2-cC
14 2p90-a1-m1-cC 266 22 0.1190 0.0376 0.4545 7.3 2p90-a1-m1-cC_2p90-a1-m1-cA
15 2p90-a1-m1-cA 269 22 0.1190 0.0372 0.4545 7.3 2p90-a1-m1-cC_2p90-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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