Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
WHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQ
QLPVTAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fj2-a2-m1-cC 68 67 1.0000 0.9853 1.0000 5.51e-45 2fj2-a2-m1-cD_2fj2-a2-m1-cC
2 2fj2-a2-m1-cD 67 67 1.0000 1.0000 1.0000 6.83e-45 2fj2-a2-m1-cD_2fj2-a2-m1-cC
3 2vxw-a1-m1-cD 62 59 0.3582 0.3871 0.4068 2.59e-15 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
4 2vxw-a1-m1-cB 69 61 0.3582 0.3478 0.3934 3.25e-15 2vxw-a1-m1-cD_2vxw-a1-m1-cB
5 2vxw-a1-m1-cA 69 61 0.3582 0.3478 0.3934 3.25e-15 2vxw-a1-m1-cD_2vxw-a1-m1-cA
6 5l2u-a2-m2-cI 65 59 0.3582 0.3692 0.4068 3.43e-15 5l2u-a2-m2-cG_5l2u-a2-m2-cI
7 5dnf-a1-m1-cG 65 59 0.3582 0.3692 0.4068 3.43e-15 5dnf-a1-m1-cE_5dnf-a1-m1-cG
8 5dnf-a1-m1-cE 65 59 0.3582 0.3692 0.4068 3.43e-15 5dnf-a1-m1-cE_5dnf-a1-m1-cG
9 5dnf-a1-m1-cD 65 59 0.3582 0.3692 0.4068 3.43e-15 5dnf-a1-m1-cA_5dnf-a1-m1-cD
10 5dnf-a1-m1-cA 65 59 0.3582 0.3692 0.4068 3.43e-15 5dnf-a1-m1-cA_5dnf-a1-m1-cD
11 5l2u-a2-m2-cH 64 59 0.3582 0.3750 0.4068 3.62e-15 5l2u-a2-m2-cG_5l2u-a2-m2-cH
12 5l2u-a2-m2-cG 64 59 0.3582 0.3750 0.4068 3.62e-15 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
13 6aez-a1-m3-cA 64 59 0.3582 0.3750 0.4068 3.70e-15 6aez-a1-m2-cA_6aez-a1-m3-cA
14 6aez-a1-m2-cA 64 59 0.3582 0.3750 0.4068 3.70e-15 6aez-a1-m2-cA_6aez-a1-m3-cA
15 2l9h-a1-m1-cC 67 59 0.3582 0.3582 0.4068 3.93e-15 2l9h-a1-m1-cA_2l9h-a1-m1-cC
16 2l9h-a1-m1-cA 67 59 0.3582 0.3582 0.4068 3.93e-15 2l9h-a1-m1-cA_2l9h-a1-m1-cC
17 1hrj-a1-m1-cB 68 59 0.3582 0.3529 0.4068 4.08e-15 1hrj-a1-m1-cA_1hrj-a1-m1-cB
18 1hrj-a1-m1-cA 68 59 0.3582 0.3529 0.4068 4.08e-15 1hrj-a1-m1-cA_1hrj-a1-m1-cB
19 4mhe-a2-m1-cB 69 56 0.4328 0.4203 0.5179 3.57e-14 4mhe-a2-m1-cC_4mhe-a2-m1-cB
20 4mhe-a2-m1-cC 61 56 0.4328 0.4754 0.5179 4.18e-14 4mhe-a2-m1-cC_4mhe-a2-m1-cB
21 2q8r-a2-m1-cG 63 61 0.3284 0.3492 0.3607 6.30e-14 2q8r-a2-m1-cF_2q8r-a2-m1-cG
22 2q8r-a2-m1-cF 63 61 0.3284 0.3492 0.3607 6.30e-14 2q8r-a2-m1-cF_2q8r-a2-m1-cG
23 6log-a1-m2-cA 63 59 0.3433 0.3651 0.3898 1.42e-13 6log-a1-m1-cA_6log-a1-m2-cA
24 6log-a1-m1-cA 63 59 0.3433 0.3651 0.3898 1.42e-13 6log-a1-m1-cA_6log-a1-m2-cA
25 5yam-a1-m1-cB 69 59 0.3284 0.3188 0.3729 8.14e-12 5yam-a1-m1-cA_5yam-a1-m1-cB
26 5yam-a1-m1-cA 69 59 0.3284 0.3188 0.3729 8.14e-12 5yam-a1-m1-cA_5yam-a1-m1-cB
27 1nr4-a5-m3-cE 69 62 0.3433 0.3333 0.3710 1.12e-10 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
28 1nr4-a5-m3-cF 66 62 0.3433 0.3485 0.3710 1.13e-10 1nr4-a5-m3-cF_1nr4-a5-m3-cE
29 1nr4-a5-m4-cG 66 57 0.3284 0.3333 0.3860 1.23e-10 1nr4-a5-m4-cG_1nr4-a5-m3-cE
30 1nr4-a5-m1-cA 67 57 0.3284 0.3284 0.3860 1.36e-10 1nr4-a5-m1-cA_1nr4-a5-m3-cE
31 5ltl-a1-m1-cB 68 60 0.3284 0.3235 0.3667 6.51e-10 5ltl-a1-m1-cA_5ltl-a1-m1-cB
32 5ltl-a1-m1-cA 67 60 0.3284 0.3284 0.3667 6.95e-10 5ltl-a1-m1-cA_5ltl-a1-m1-cB
33 2ra4-a4-m4-cB 65 59 0.2985 0.3077 0.3390 9.04e-09 2ra4-a4-m2-cB_2ra4-a4-m4-cB
34 2ra4-a4-m2-cB 65 59 0.2985 0.3077 0.3390 9.04e-09 2ra4-a4-m2-cB_2ra4-a4-m4-cB
35 2ra4-a2-m4-cB 65 59 0.2985 0.3077 0.3390 9.04e-09 2ra4-a2-m4-cA_2ra4-a2-m4-cB
36 2ra4-a2-m4-cA 65 59 0.2985 0.3077 0.3390 9.04e-09 2ra4-a2-m4-cA_2ra4-a2-m4-cB
37 7s5a-a1-m1-cA 73 60 0.3433 0.3151 0.3833 1.11e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
38 1esr-a1-m2-cA 75 60 0.3433 0.3067 0.3833 1.21e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
39 1esr-a1-m1-cA 75 60 0.3433 0.3067 0.3833 1.21e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
40 7s5a-a1-m1-cB 76 60 0.3433 0.3026 0.3833 1.35e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
41 4oij-a1-m1-cB 71 62 0.2836 0.2676 0.3065 8.21e-08 4oij-a1-m1-cA_4oij-a1-m1-cB
42 4oij-a1-m1-cA 71 62 0.2836 0.2676 0.3065 8.21e-08 4oij-a1-m1-cA_4oij-a1-m1-cB
43 1ncv-a1-m1-cB 76 57 0.2985 0.2632 0.3509 3.00e-07 1ncv-a1-m1-cA_1ncv-a1-m1-cB
44 1ncv-a1-m1-cA 76 57 0.2985 0.2632 0.3509 3.00e-07 1ncv-a1-m1-cA_1ncv-a1-m1-cB
45 5eki-a7-m1-cF 70 63 0.3582 0.3429 0.3810 2.09e-06 5eki-a7-m1-cF_5eki-a7-m1-cA
46 5eki-a7-m1-cA 72 63 0.3582 0.3333 0.3810 2.22e-06 5eki-a7-m1-cF_5eki-a7-m1-cA
47 2hci-a1-m1-cA 68 61 0.3284 0.3235 0.3607 1.24e-04 2hci-a1-m1-cB_2hci-a1-m1-cA
48 2hci-a1-m1-cB 65 60 0.3284 0.3385 0.3667 1.36e-04 2hci-a1-m1-cB_2hci-a1-m1-cA
49 1f2l-a1-m1-cC 64 47 0.2537 0.2656 0.3617 1.41e-04 1f2l-a1-m1-cC_1f2l-a1-m1-cD
50 1f2l-a1-m1-cA 64 47 0.2537 0.2656 0.3617 1.41e-04 1f2l-a1-m1-cA_1f2l-a1-m1-cD
51 1f2l-a1-m1-cD 70 47 0.2537 0.2429 0.3617 1.52e-04 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
52 2jp1-a1-m1-cB 60 54 0.2687 0.3000 0.3333 7.57e-04 2jp1-a1-m1-cA_2jp1-a1-m1-cB
53 2jp1-a1-m1-cA 60 54 0.2687 0.3000 0.3333 7.57e-04 2jp1-a1-m1-cA_2jp1-a1-m1-cB
54 2n54-a1-m1-cB 66 54 0.2537 0.2576 0.3148 0.007 2n54-a1-m1-cA_2n54-a1-m1-cB
55 2n54-a1-m1-cA 66 54 0.2537 0.2576 0.3148 0.007 2n54-a1-m1-cA_2n54-a1-m1-cB
56 2mgs-a1-m1-cB 71 32 0.1642 0.1549 0.3438 0.22 2mgs-a1-m1-cA_2mgs-a1-m1-cB
57 2mgs-a1-m1-cA 71 32 0.1642 0.1549 0.3438 0.22 2mgs-a1-m1-cA_2mgs-a1-m1-cB
58 1qe6-a3-m2-cA 68 32 0.1194 0.1176 0.2500 0.60 1qe6-a3-m2-cA_1qe6-a3-m2-cB
59 1qe6-a3-m2-cB 71 32 0.1194 0.1127 0.2500 0.65 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
60 1qe6-a3-m1-cD 72 32 0.1194 0.1111 0.2500 0.65 1qe6-a3-m2-cB_1qe6-a3-m1-cD
61 3n52-a3-m1-cD 70 40 0.1940 0.1857 0.3250 0.65 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
62 1mi2-a1-m1-cB 73 40 0.1940 0.1781 0.3250 0.70 1mi2-a1-m1-cA_1mi2-a1-m1-cB
63 1mi2-a1-m1-cA 73 40 0.1940 0.1781 0.3250 0.70 1mi2-a1-m1-cA_1mi2-a1-m1-cB
64 3n52-a3-m1-cC 67 40 0.1940 0.1940 0.3250 0.71 3n52-a3-m1-cC_3n52-a3-m1-cD
65 3n52-a3-m1-cB 71 40 0.1940 0.1831 0.3250 0.73 3n52-a3-m1-cD_3n52-a3-m1-cB
66 2ia0-a1-m1-cA 156 51 0.2090 0.0897 0.2745 0.78 2ia0-a1-m1-cB_2ia0-a1-m1-cA
67 1plf-a1-m1-cC 63 32 0.1642 0.1746 0.3438 0.83 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
68 1plf-a1-m1-cA 63 32 0.1642 0.1746 0.3438 0.83 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
69 2ia0-a1-m1-cB 153 41 0.1791 0.0784 0.2927 0.85 2ia0-a1-m1-cB_2ia0-a1-m1-cA
70 1plf-a1-m1-cD 65 32 0.1642 0.1692 0.3438 0.90 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
71 1plf-a1-m1-cB 65 32 0.1642 0.1692 0.3438 0.90 1plf-a1-m1-cB_1plf-a1-m1-cD
72 1msh-a1-m1-cB 72 32 0.1493 0.1389 0.3125 1.4 1msh-a1-m1-cA_1msh-a1-m1-cB
73 1msh-a1-m1-cA 72 32 0.1493 0.1389 0.3125 1.4 1msh-a1-m1-cA_1msh-a1-m1-cB
74 4zua-a2-m2-cB 151 26 0.1493 0.0662 0.3846 2.1 4zua-a2-m1-cB_4zua-a2-m2-cB
75 4zua-a2-m1-cB 151 26 0.1493 0.0662 0.3846 2.1 4zua-a2-m1-cB_4zua-a2-m2-cB
76 1tvx-a1-m1-cD 71 31 0.1642 0.1549 0.3548 2.6 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
77 1tvx-a1-m1-cB 71 31 0.1642 0.1549 0.3548 2.6 1tvx-a1-m1-cB_1tvx-a1-m1-cD
78 1tvx-a1-m1-cC 64 31 0.1642 0.1719 0.3548 2.7 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
79 1tvx-a1-m1-cA 64 31 0.1642 0.1719 0.3548 2.7 1tvx-a1-m1-cA_1tvx-a1-m1-cC
80 1rod-a1-m1-cB 72 32 0.1343 0.1250 0.2812 2.8 1rod-a1-m1-cA_1rod-a1-m1-cB
81 1rod-a1-m1-cA 72 32 0.1343 0.1250 0.2812 2.8 1rod-a1-m1-cA_1rod-a1-m1-cB
82 8cuz-a1-m1-cB 925 30 0.1940 0.0141 0.4333 3.2 8cuz-a1-m1-cA_8cuz-a1-m1-cB
83 8cuz-a1-m1-cA 925 30 0.1940 0.0141 0.4333 3.2 8cuz-a1-m1-cA_8cuz-a1-m1-cB
84 4pch-a1-m1-cC 265 44 0.1940 0.0491 0.2955 5.2 4pch-a1-m1-cC_4pch-a1-m1-cB
85 4pch-a1-m1-cB 266 44 0.1940 0.0489 0.2955 5.3 4pch-a1-m1-cC_4pch-a1-m1-cB
86 8dgc-a1-m1-cC 2028 23 0.1343 0.0044 0.3913 9.5 8dgc-a1-m1-cA_8dgc-a1-m1-cC, 8dgc-a1-m1-cD_8dgc-a1-m1-cC
87 8dgc-a1-m1-cA 2028 23 0.1343 0.0044 0.3913 9.5 8dgc-a1-m1-cA_8dgc-a1-m1-cC
88 8dgc-a1-m1-cD 2004 23 0.1343 0.0045 0.3913 9.6 8dgc-a1-m1-cD_8dgc-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600