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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
YAFKIPLSIRQKICSSLDAPNSRGNDWRLLAQKLSDRYLNYFATKASPTGVILDLWEARQ
QDDGDLNSLASALEEGKSELVAATDG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wmg-a1-m1-cA 86 86 1.0000 1.0000 1.0000 3.46e-59 1wmg-a1-m1-cF_1wmg-a1-m1-cA
2 1wmg-a1-m1-cE 84 84 0.9767 1.0000 1.0000 1.50e-57 1wmg-a1-m1-cF_1wmg-a1-m1-cE
3 1wmg-a1-m1-cF 83 83 0.9651 1.0000 1.0000 1.78e-56 1wmg-a1-m1-cF_1wmg-a1-m1-cA, 1wmg-a1-m1-cF_1wmg-a1-m1-cE
4 3mop-a1-m1-cF 105 55 0.1977 0.1619 0.3091 8.44e-04 3mop-a1-m1-cB_3mop-a1-m1-cF, 3mop-a1-m1-cE_3mop-a1-m1-cF
5 3mop-a1-m1-cE 105 55 0.1977 0.1619 0.3091 8.44e-04 3mop-a1-m1-cB_3mop-a1-m1-cE, 3mop-a1-m1-cE_3mop-a1-m1-cF
6 3mop-a1-m1-cB 105 55 0.1977 0.1619 0.3091 8.44e-04 3mop-a1-m1-cB_3mop-a1-m1-cE, 3mop-a1-m1-cB_3mop-a1-m1-cF
7 3fcn-a1-m2-cA 154 23 0.1395 0.0779 0.5217 3.3 3fcn-a1-m1-cA_3fcn-a1-m2-cA
8 3fcn-a1-m1-cA 154 23 0.1395 0.0779 0.5217 3.3 3fcn-a1-m1-cA_3fcn-a1-m2-cA
9 5c4q-a3-m1-cA 118 34 0.1512 0.1102 0.3824 7.5 5c4q-a3-m1-cB_5c4q-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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