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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
YEIMLIRPKTIDDINYVVDQVLEESNPVILDLSFLEKESPANFKLAGEKIKQMRSNYGAE
ALLLSRCNDKNLIIIAPKGVSLVRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7al1-a1-m2-cA 85 85 1.0000 1.0000 1.0000 2.00e-57 7al1-a1-m1-cA_7al1-a1-m2-cA
2 7al1-a1-m1-cA 85 85 1.0000 1.0000 1.0000 2.00e-57 7al1-a1-m1-cA_7al1-a1-m2-cA
3 5zi2-a1-m1-cB 339 36 0.1647 0.0413 0.3889 3.6 5zi2-a1-m1-cA_5zi2-a1-m1-cB
4 5zi2-a1-m1-cA 339 36 0.1647 0.0413 0.3889 3.6 5zi2-a1-m1-cA_5zi2-a1-m1-cB
5 4h2l-a1-m2-cA 141 34 0.1647 0.0993 0.4118 5.5 4h2l-a1-m1-cA_4h2l-a1-m2-cA
6 4h2l-a1-m1-cA 141 34 0.1647 0.0993 0.4118 5.5 4h2l-a1-m1-cA_4h2l-a1-m2-cA
7 2rao-a1-m1-cC 141 27 0.1647 0.0993 0.5185 7.7 2rao-a1-m1-cA_2rao-a1-m1-cC
8 2rao-a1-m1-cA 141 27 0.1647 0.0993 0.5185 7.7 2rao-a1-m1-cA_2rao-a1-m1-cC
9 4yu3-a1-m2-cA 141 27 0.1647 0.0993 0.5185 8.9 4yu3-a1-m1-cA_4yu3-a1-m2-cA
10 4yu3-a1-m1-cA 141 27 0.1647 0.0993 0.5185 8.9 4yu3-a1-m1-cA_4yu3-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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