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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
YFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKSTTAATPVKEVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bid-a4-m1-cH 56 56 1.0000 1.0000 1.0000 1.35e-37 3bid-a4-m1-cH_3bid-a4-m1-cG
2 3bid-a4-m1-cG 59 56 1.0000 0.9492 1.0000 1.66e-37 3bid-a4-m1-cH_3bid-a4-m1-cG
3 2k7i-a1-m1-cB 62 47 0.3929 0.3548 0.4681 6.47e-11 2k7i-a1-m1-cA_2k7i-a1-m1-cB
4 2k7i-a1-m1-cA 62 47 0.3929 0.3548 0.4681 6.47e-11 2k7i-a1-m1-cA_2k7i-a1-m1-cB
5 6q2z-a1-m1-cB 60 55 0.3929 0.3667 0.4000 4.18e-08 6q2z-a1-m1-cA_6q2z-a1-m1-cB
6 6q2z-a1-m1-cA 60 55 0.3929 0.3667 0.4000 4.18e-08 6q2z-a1-m1-cA_6q2z-a1-m1-cB
7 2cfu-a1-m2-cA 627 27 0.1429 0.0128 0.2963 2.3 2cfu-a1-m1-cA_2cfu-a1-m2-cA
8 2cfu-a1-m1-cA 627 27 0.1429 0.0128 0.2963 2.3 2cfu-a1-m1-cA_2cfu-a1-m2-cA
9 2yhe-a3-m1-cE 634 17 0.1429 0.0126 0.4706 3.2 2yhe-a3-m1-cC_2yhe-a3-m1-cE
10 2yhe-a3-m1-cC 634 17 0.1429 0.0126 0.4706 3.2 2yhe-a3-m1-cC_2yhe-a3-m1-cE
11 4nur-a1-m1-cB 633 43 0.1964 0.0174 0.2558 4.3 4nur-a1-m1-cA_4nur-a1-m1-cB
12 4nur-a1-m1-cA 633 43 0.1964 0.0174 0.2558 4.3 4nur-a1-m1-cA_4nur-a1-m1-cB
13 8em7-a1-m1-cB 4378 25 0.1786 0.0023 0.4000 7.4 8em7-a1-m1-cA_8em7-a1-m1-cB
14 8em7-a1-m1-cA 4378 25 0.1786 0.0023 0.4000 7.4 8em7-a1-m1-cA_8em7-a1-m1-cB
15 4wjg-a3-m1-cW 310 28 0.1607 0.0290 0.3214 8.6 4wjg-a3-m1-c2_4wjg-a3-m1-cW
16 4wjg-a3-m1-c2 310 28 0.1607 0.0290 0.3214 8.6 4wjg-a3-m1-c2_4wjg-a3-m1-cW
17 4f4o-a2-m1-cL 309 28 0.1607 0.0291 0.3214 9.2 4f4o-a2-m1-cI_4f4o-a2-m1-cL
18 4f4o-a2-m1-cI 309 28 0.1607 0.0291 0.3214 9.2 4f4o-a2-m1-cI_4f4o-a2-m1-cL

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Reference:
Jacob Schwartz et al.

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