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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
YFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKSTTAATPVKEVLEHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bid-a4-m1-cG 59 59 1.0000 1.0000 1.0000 5.28e-40 3bid-a4-m1-cH_3bid-a4-m1-cG
2 3bid-a4-m1-cH 56 56 0.9492 1.0000 1.0000 1.75e-37 3bid-a4-m1-cH_3bid-a4-m1-cG
3 2k7i-a1-m1-cB 62 47 0.3729 0.3548 0.4681 8.89e-11 2k7i-a1-m1-cA_2k7i-a1-m1-cB
4 2k7i-a1-m1-cA 62 47 0.3729 0.3548 0.4681 8.89e-11 2k7i-a1-m1-cA_2k7i-a1-m1-cB
5 6q2z-a1-m1-cB 60 58 0.3898 0.3833 0.3966 3.54e-08 6q2z-a1-m1-cA_6q2z-a1-m1-cB
6 6q2z-a1-m1-cA 60 58 0.3898 0.3833 0.3966 3.54e-08 6q2z-a1-m1-cA_6q2z-a1-m1-cB
7 2cfu-a1-m2-cA 627 27 0.1356 0.0128 0.2963 2.5 2cfu-a1-m1-cA_2cfu-a1-m2-cA
8 2cfu-a1-m1-cA 627 27 0.1356 0.0128 0.2963 2.5 2cfu-a1-m1-cA_2cfu-a1-m2-cA
9 2yhe-a3-m1-cE 634 17 0.1356 0.0126 0.4706 3.4 2yhe-a3-m1-cC_2yhe-a3-m1-cE
10 2yhe-a3-m1-cC 634 17 0.1356 0.0126 0.4706 3.4 2yhe-a3-m1-cC_2yhe-a3-m1-cE
11 4nur-a1-m1-cB 633 35 0.1695 0.0158 0.2857 5.6 4nur-a1-m1-cA_4nur-a1-m1-cB
12 4nur-a1-m1-cA 633 35 0.1695 0.0158 0.2857 5.6 4nur-a1-m1-cA_4nur-a1-m1-cB
13 8em7-a1-m1-cB 4378 25 0.1695 0.0023 0.4000 8.3 8em7-a1-m1-cA_8em7-a1-m1-cB
14 8em7-a1-m1-cA 4378 25 0.1695 0.0023 0.4000 8.3 8em7-a1-m1-cA_8em7-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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