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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
YFQGCLSIPSQVVAVDNERQSVTVDTLGVRRDVSSHLTEPLAIGDYVLIHIGFVNKIDRN
DALQSLELYQEIVSKLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d3r-a2-m2-cB 77 77 1.0000 1.0000 1.0000 4.06e-52 3d3r-a2-m1-cB_3d3r-a2-m2-cB, 3d3r-a2-m2-cB_3d3r-a2-m1-cA, 3d3r-a2-m2-cB_3d3r-a2-m2-cA
2 3d3r-a2-m1-cB 77 77 1.0000 1.0000 1.0000 4.06e-52 3d3r-a2-m1-cB_3d3r-a2-m2-cB
3 3d3r-a2-m2-cA 80 77 1.0000 0.9625 1.0000 4.24e-52 3d3r-a2-m2-cB_3d3r-a2-m2-cA
4 3d3r-a2-m1-cA 80 77 1.0000 0.9625 1.0000 4.24e-52 3d3r-a2-m2-cB_3d3r-a2-m1-cA
5 2d0v-a2-m1-cI 595 33 0.1688 0.0218 0.3939 1.7 2d0v-a2-m1-cI_2d0v-a2-m1-cD
6 2d0v-a2-m1-cD 597 33 0.1688 0.0218 0.3939 1.7 2d0v-a2-m1-cI_2d0v-a2-m1-cD
7 6p4x-a9-m1-cD 488 56 0.2078 0.0328 0.2857 4.5 6p4x-a9-m1-cD_6p4x-a9-m1-cF
8 6pdt-a1-m1-cD 500 56 0.2078 0.0320 0.2857 4.5 6pdt-a1-m1-cB_6pdt-a1-m1-cD, 6pdt-a1-m1-cC_6pdt-a1-m1-cD
9 6pdt-a1-m1-cC 500 56 0.2078 0.0320 0.2857 4.5 6pdt-a1-m1-cC_6pdt-a1-m1-cD
10 6pdt-a1-m1-cB 500 56 0.2078 0.0320 0.2857 4.5 6pdt-a1-m1-cB_6pdt-a1-m1-cD
11 6p4x-a9-m1-cF 493 56 0.2078 0.0325 0.2857 4.6 6p4x-a9-m1-cD_6p4x-a9-m1-cF
12 3l74-a1-m1-cP 379 41 0.1558 0.0317 0.2927 5.4 3l74-a1-m1-cP_3l74-a1-m1-cC
13 3l74-a1-m1-cC 380 41 0.1558 0.0316 0.2927 5.4 3l74-a1-m1-cP_3l74-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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