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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
YIYLGGAILAEVIGTTLMVGTIICYCASFWLLAQTLAIAYAIWSGVGIVLISLLSWGFFG
AIIGMMLICAGVLIINLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2i68-a1-m1-cB 78 78 1.0000 1.0000 1.0000 1.79e-46 2i68-a1-m1-cA_2i68-a1-m1-cB
2 2i68-a1-m1-cA 78 78 1.0000 1.0000 1.0000 1.79e-46 2i68-a1-m1-cA_2i68-a1-m1-cB
3 3b61-a2-m1-cD 107 101 1.0000 0.7290 0.7723 1.97e-38 3b61-a2-m1-cC_3b61-a2-m1-cD
4 3b61-a2-m1-cC 107 101 1.0000 0.7290 0.7723 1.97e-38 3b61-a2-m1-cC_3b61-a2-m1-cD
5 7sfq-a1-m1-cB 102 101 0.9872 0.7549 0.7624 3.95e-37 7sfq-a1-m1-cA_7sfq-a1-m1-cB
6 7sfq-a1-m1-cA 102 101 0.9872 0.7549 0.7624 3.95e-37 7sfq-a1-m1-cA_7sfq-a1-m1-cB
7 3b62-a1-m1-cA 95 95 0.9231 0.7579 0.7579 1.84e-33 3b62-a1-m1-cB_3b62-a1-m1-cA
8 3b62-a1-m1-cB 87 87 0.8205 0.7356 0.7356 1.19e-28 3b62-a1-m1-cB_3b62-a1-m1-cA
9 6wk8-a1-m1-cB 104 32 0.2179 0.1635 0.5312 2.2 6wk8-a1-m1-cA_6wk8-a1-m1-cB
10 6wk8-a1-m1-cA 104 32 0.2179 0.1635 0.5312 2.2 6wk8-a1-m1-cA_6wk8-a1-m1-cB
11 2vz8-a1-m1-cA 1962 42 0.1538 0.0061 0.2857 3.0 2vz8-a1-m1-cA_2vz8-a1-m1-cB
12 5sy1-a1-m1-cB 582 31 0.1538 0.0206 0.3871 9.6 5sy1-a1-m1-cA_5sy1-a1-m1-cB
13 5sy1-a1-m1-cA 582 31 0.1538 0.0206 0.3871 9.6 5sy1-a1-m1-cA_5sy1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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