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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4gv5-a2-m2-cB 42 42 1.0000 1.0000 1.0000 2.34e-25 4gv5-a2-m2-cA_4gv5-a2-m2-cB
2 4gv5-a2-m2-cA 42 42 1.0000 1.0000 1.0000 2.34e-25 4gv5-a2-m2-cA_4gv5-a2-m2-cB
3 4a7p-a2-m2-cB 420 17 0.1905 0.0190 0.4706 2.1 4a7p-a2-m1-cB_4a7p-a2-m2-cB
4 4a7p-a2-m1-cB 420 17 0.1905 0.0190 0.4706 2.1 4a7p-a2-m1-cB_4a7p-a2-m2-cB
5 6pf8-a3-m2-cE 506 18 0.2381 0.0198 0.5556 4.6 6pf8-a3-m1-cE_6pf8-a3-m2-cE
6 6pf8-a3-m1-cE 506 18 0.2381 0.0198 0.5556 4.6 6pf8-a3-m1-cE_6pf8-a3-m2-cE
7 4r16-a1-m1-cB 409 21 0.2381 0.0244 0.4762 7.6 4r16-a1-m1-cA_4r16-a1-m1-cB
8 4r16-a1-m1-cA 409 21 0.2381 0.0244 0.4762 7.6 4r16-a1-m1-cA_4r16-a1-m1-cB
9 4m8l-a2-m1-cB 217 25 0.2143 0.0415 0.3600 8.3 4m8l-a2-m1-cB_4m8l-a2-m1-cD
10 4m8l-a2-m1-cD 218 25 0.2143 0.0413 0.3600 8.3 4m8l-a2-m1-cB_4m8l-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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