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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=18)
YRISYDFDELAKLLRQAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1sn9-a1-m1-cD 18 18 1.0000 1.0000 1.0000 7.06e-07 1sn9-a1-m1-cC_1sn9-a1-m1-cD
2 1sn9-a1-m1-cC 18 18 1.0000 1.0000 1.0000 7.06e-07 1sn9-a1-m1-cC_1sn9-a1-m1-cD
3 1sna-a2-m3-cD 17 18 0.9444 1.0000 0.9444 2.19e-04 1sna-a2-m1-cD_1sna-a2-m3-cD
4 1sna-a2-m1-cD 17 18 0.9444 1.0000 0.9444 2.19e-04 1sna-a2-m1-cD_1sna-a2-m3-cD
5 1sna-a1-m2-cB 17 18 0.9444 1.0000 0.9444 2.19e-04 1sna-a1-m1-cA_1sna-a1-m2-cB
6 1sna-a1-m1-cA 17 18 0.9444 1.0000 0.9444 2.19e-04 1sna-a1-m1-cA_1sna-a1-m2-cB
7 2vd2-a1-m2-cA 212 12 0.5000 0.0425 0.7500 8.4 2vd2-a1-m1-cA_2vd2-a1-m2-cA
8 2vd2-a1-m1-cA 212 12 0.5000 0.0425 0.7500 8.4 2vd2-a1-m1-cA_2vd2-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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