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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
YRPSRPSNPRDDWKLWLVVNPGTWLIPLLITFLATALIVHSFVFTHEAYNPLTY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q53-a1-m1-cD 57 54 1.0000 0.9474 1.0000 6.50e-35 6q53-a1-m1-cA_6q53-a1-m1-cD
2 6q53-a1-m1-cA 54 54 1.0000 1.0000 1.0000 1.14e-34 6q53-a1-m1-cA_6q53-a1-m1-cD
3 6zxa-a1-m1-cM 69 44 0.2778 0.2174 0.3409 6.12e-08 6zxa-a1-m1-cK_6zxa-a1-m1-cM
4 6zxa-a1-m1-cK 69 44 0.2778 0.2174 0.3409 6.12e-08 6zxa-a1-m1-cK_6zxa-a1-m1-cM
5 7zdi-a1-m1-cQ 48 41 0.2593 0.2917 0.3415 0.28 7zdi-a1-m1-cO_7zdi-a1-m1-cQ
6 7zdi-a1-m1-cO 48 41 0.2593 0.2917 0.3415 0.28 7zdi-a1-m1-cO_7zdi-a1-m1-cQ
7 7vrj-a1-m1-cY 62 40 0.2037 0.1774 0.2750 0.59 7vrj-a1-m1-cW_7vrj-a1-m1-cY
8 7vrj-a1-m1-cW 55 40 0.2037 0.2000 0.2750 0.78 7vrj-a1-m1-cW_7vrj-a1-m1-cY
9 5y5s-a1-m1-cD 55 35 0.1481 0.1455 0.2286 9.0 5y5s-a1-m1-cA_5y5s-a1-m1-cD
10 5y5s-a1-m1-c1 56 35 0.1481 0.1429 0.2286 9.4 5y5s-a1-m1-c1_5y5s-a1-m1-cY
11 7pbw-a1-m1-cAI 49 44 0.2778 0.3061 0.3409 9.5 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
12 7pbw-a1-m1-cAH 49 44 0.2778 0.3061 0.3409 9.5 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
13 5y5s-a1-m1-cY 57 35 0.1481 0.1404 0.2286 9.5 5y5s-a1-m1-c1_5y5s-a1-m1-cY
14 5y5s-a1-m1-cA 54 35 0.1481 0.1481 0.2286 9.8 5y5s-a1-m1-cA_5y5s-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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