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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
YSKPCCDLCMCTRSMPPQCSCEDRINSCHSDCKSCMCTRSQPGQCRCLDTNDFCYKPCKS
R

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pi2-a1-m6-cA 61 61 1.0000 1.0000 1.0000 7.05e-38 1pi2-a1-m3-cA_1pi2-a1-m6-cA, 1pi2-a1-m4-cA_1pi2-a1-m6-cA, 1pi2-a1-m5-cA_1pi2-a1-m6-cA
2 1pi2-a1-m5-cA 61 61 1.0000 1.0000 1.0000 7.05e-38 1pi2-a1-m5-cA_1pi2-a1-m6-cA
3 1pi2-a1-m4-cA 61 61 1.0000 1.0000 1.0000 7.05e-38 1pi2-a1-m4-cA_1pi2-a1-m6-cA
4 1pi2-a1-m3-cA 61 61 1.0000 1.0000 1.0000 7.05e-38 1pi2-a1-m3-cA_1pi2-a1-m6-cA
5 2r33-a1-m1-cB 57 57 0.6557 0.7018 0.7018 3.96e-22 2r33-a1-m1-cA_2r33-a1-m1-cB
6 1d6r-a1-m2-cI 58 58 0.6393 0.6724 0.6724 1.66e-20 1d6r-a1-m1-cI_1d6r-a1-m2-cI
7 1d6r-a1-m1-cI 58 58 0.6393 0.6724 0.6724 1.66e-20 1d6r-a1-m1-cI_1d6r-a1-m2-cI
8 2r33-a1-m1-cA 55 57 0.6393 0.7091 0.6842 2.13e-19 2r33-a1-m1-cA_2r33-a1-m1-cB
9 1h34-a1-m2-cA 57 57 0.6230 0.6667 0.6667 2.75e-19 1h34-a1-m1-cA_1h34-a1-m2-cA
10 1h34-a1-m1-cA 57 57 0.6230 0.6667 0.6667 2.75e-19 1h34-a1-m1-cA_1h34-a1-m2-cA
11 6lh6-a1-m1-cB 66 57 0.4918 0.4545 0.5263 3.89e-15 6lh6-a1-m1-cB_6lh6-a1-m1-cA
12 6lh6-a1-m1-cB 66 28 0.2459 0.2273 0.5357 0.010 6lh6-a1-m1-cB_6lh6-a1-m1-cA
13 6lh6-a1-m1-cA 71 57 0.4918 0.4225 0.5263 5.07e-15 6lh6-a1-m1-cB_6lh6-a1-m1-cA
14 6lh6-a1-m1-cA 71 28 0.2459 0.2113 0.5357 0.011 6lh6-a1-m1-cB_6lh6-a1-m1-cA
15 1pbi-a1-m2-cB 68 56 0.4918 0.4412 0.5357 1.04e-14 1pbi-a1-m2-cA_1pbi-a1-m2-cB
16 1pbi-a1-m2-cA 68 56 0.4918 0.4412 0.5357 1.04e-14 1pbi-a1-m1-cA_1pbi-a1-m2-cA, 1pbi-a1-m2-cA_1pbi-a1-m2-cB
17 1pbi-a1-m1-cA 68 56 0.4918 0.4412 0.5357 1.04e-14 1pbi-a1-m1-cA_1pbi-a1-m2-cA
18 1tab-a1-m2-cI 36 58 0.3934 0.6667 0.4138 3.65e-05 1tab-a1-m1-cI_1tab-a1-m2-cI
19 1tab-a1-m1-cI 36 58 0.3934 0.6667 0.4138 3.65e-05 1tab-a1-m1-cI_1tab-a1-m2-cI
20 3eaa-a2-m6-cB 158 55 0.2459 0.0949 0.2727 3.9 3eaa-a2-m2-cB_3eaa-a2-m6-cB
21 3eaa-a2-m2-cB 158 55 0.2459 0.0949 0.2727 3.9 3eaa-a2-m2-cB_3eaa-a2-m6-cB
22 4pph-a1-m1-cE 391 46 0.2295 0.0358 0.3043 9.8 4pph-a1-m1-cE_4pph-a1-m1-cF
23 4pph-a1-m1-cF 392 46 0.2295 0.0357 0.3043 9.8 4pph-a1-m1-cA_4pph-a1-m1-cF, 4pph-a1-m1-cE_4pph-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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