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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
YSNERVEKIIQDLLDVLVKEEVTPDLALCLGNAVTNIIAQVPESKRVAVVDNFTKALKQS
VLEHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ota-a1-m1-cA 66 66 1.0000 1.0000 1.0000 3.67e-43 2ota-a1-m1-cB_2ota-a1-m1-cA
2 2ota-a1-m1-cB 60 60 0.9091 1.0000 1.0000 2.66e-37 2ota-a1-m1-cB_2ota-a1-m1-cA
3 2qti-a1-m2-cA 66 61 0.4394 0.4394 0.4754 1.35e-10 2qti-a1-m1-cA_2qti-a1-m2-cA
4 2qti-a1-m1-cA 66 61 0.4394 0.4394 0.4754 1.35e-10 2qti-a1-m1-cA_2qti-a1-m2-cA
5 2jrx-a1-m1-cB 83 65 0.4091 0.3253 0.4154 5.41e-10 2jrx-a1-m1-cA_2jrx-a1-m1-cB
6 2jrx-a1-m1-cA 83 65 0.4091 0.3253 0.4154 5.41e-10 2jrx-a1-m1-cA_2jrx-a1-m1-cB
7 2jpq-a1-m1-cB 83 63 0.3636 0.2892 0.3810 9.91e-07 2jpq-a1-m1-cA_2jpq-a1-m1-cB
8 2jpq-a1-m1-cA 83 63 0.3636 0.2892 0.3810 9.91e-07 2jpq-a1-m1-cA_2jpq-a1-m1-cB
9 2juz-a1-m1-cB 80 63 0.3030 0.2500 0.3175 6.01e-04 2juz-a1-m1-cA_2juz-a1-m1-cB
10 2juz-a1-m1-cA 80 63 0.3030 0.2500 0.3175 6.01e-04 2juz-a1-m1-cA_2juz-a1-m1-cB
11 6tdv-a1-m1-ch 388 54 0.2727 0.0464 0.3333 2.6 6tdv-a1-m1-cH_6tdv-a1-m1-ch
12 6tdv-a1-m1-cH 388 54 0.2727 0.0464 0.3333 2.6 6tdv-a1-m1-cH_6tdv-a1-m1-ch
13 6oza-a1-m1-cB 183 18 0.1515 0.0546 0.5556 5.3 6oza-a1-m1-cA_6oza-a1-m1-cB
14 6oza-a1-m1-cA 183 18 0.1515 0.0546 0.5556 5.3 6oza-a1-m1-cA_6oza-a1-m1-cB
15 6tdu-a1-m1-ch 460 53 0.2576 0.0370 0.3208 5.5 6tdu-a1-m1-cH_6tdu-a1-m1-ch
16 6tdu-a1-m1-cH 460 53 0.2576 0.0370 0.3208 5.5 6tdu-a1-m1-cH_6tdu-a1-m1-ch

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Reference:
Jacob Schwartz et al.

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