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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
YSVCDSESLWVTDKSSAIDIRGHQVTVLGEIVKQYFYETRCKEGCRGIDDKHWNSQCKTS
QTYVRALTSENNKLVGWRWIRIDTSCVCAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1b8k-a1-m2-cA 90 90 1.0000 1.0000 1.0000 5.19e-63 1b8k-a1-m1-cA_1b8k-a1-m2-cA
2 1b8k-a1-m1-cA 90 90 1.0000 1.0000 1.0000 5.19e-63 1b8k-a1-m1-cA_1b8k-a1-m2-cA
3 1nt3-a1-m2-cA 108 102 1.0000 0.8333 0.8824 2.73e-58 1nt3-a1-m1-cA_1nt3-a1-m2-cA
4 1nt3-a1-m1-cA 108 102 1.0000 0.8333 0.8824 2.73e-58 1nt3-a1-m1-cA_1nt3-a1-m2-cA
5 1bnd-a1-m2-cB 108 101 0.9889 0.8241 0.8812 2.32e-57 1bnd-a1-m1-cB_1bnd-a1-m2-cB
6 1bnd-a1-m1-cB 108 101 0.9889 0.8241 0.8812 2.32e-57 1bnd-a1-m1-cB_1bnd-a1-m2-cB
7 1bnd-a1-m2-cA 109 103 0.6889 0.5688 0.6019 7.33e-37 1bnd-a1-m1-cA_1bnd-a1-m2-cA
8 1bnd-a1-m1-cA 109 103 0.6889 0.5688 0.6019 7.33e-37 1bnd-a1-m1-cA_1bnd-a1-m2-cA
9 1www-a1-m1-cW 109 96 0.6222 0.5138 0.5833 9.96e-37 1www-a1-m1-cV_1www-a1-m1-cW
10 1www-a1-m1-cV 108 96 0.6222 0.5185 0.5833 1.09e-36 1www-a1-m1-cV_1www-a1-m1-cW
11 4ec7-a1-m1-cB 108 102 0.5556 0.4630 0.4902 3.54e-28 4ec7-a1-m1-cA_4ec7-a1-m1-cB
12 4ec7-a1-m1-cA 108 102 0.5556 0.4630 0.4902 3.54e-28 4ec7-a1-m1-cA_4ec7-a1-m1-cB
13 4rct-a1-m1-cB 345 34 0.1556 0.0406 0.4118 0.039 4rct-a1-m1-cA_4rct-a1-m1-cB
14 4rct-a1-m1-cA 345 34 0.1556 0.0406 0.4118 0.039 4rct-a1-m1-cA_4rct-a1-m1-cB
15 3lto-a1-m1-cB 311 72 0.2333 0.0675 0.2917 8.2 3lto-a1-m1-cA_3lto-a1-m1-cB
16 3lto-a1-m1-cA 311 72 0.2333 0.0675 0.2917 8.2 3lto-a1-m1-cA_3lto-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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