Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=93)
YVPDMGDLIWVDFHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGGVALADQV
KSIAWRARGATKKGTVAPEELQLIKAKINVLIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3nfc-a2-m1-cC 93 93 1.0000 1.0000 1.0000 1.26e-66 3nfc-a2-m1-cB_3nfc-a2-m1-cC
2 3nfc-a2-m1-cB 92 93 0.9892 1.0000 0.9892 1.73e-63 3nfc-a2-m1-cB_3nfc-a2-m1-cC
3 7d2q-a1-m1-cA 100 98 0.4624 0.4300 0.4388 2.26e-23 7d2q-a1-m1-cA_7d2q-a1-m1-cG
4 7d2n-a1-m1-cB 108 105 0.4624 0.3981 0.4095 2.47e-22 7d2n-a1-m1-cC_7d2n-a1-m1-cB
5 7d2n-a1-m1-cC 100 98 0.4516 0.4200 0.4286 2.70e-22 7d2n-a1-m1-cC_7d2n-a1-m1-cB
6 7d2p-a1-m1-cB 111 108 0.4624 0.3874 0.3981 6.83e-22 7d2p-a1-m1-cA_7d2p-a1-m1-cB
7 7d2p-a1-m1-cA 111 108 0.4624 0.3874 0.3981 6.83e-22 7d2p-a1-m1-cA_7d2p-a1-m1-cB
8 7d2q-a1-m1-cG 110 108 0.4624 0.3909 0.3981 7.84e-22 7d2q-a1-m1-cA_7d2q-a1-m1-cG
9 7bye-a2-m1-cE 100 98 0.4516 0.4200 0.4286 1.29e-19 7bye-a2-m1-cF_7bye-a2-m1-cE
10 7bye-a2-m1-cF 98 97 0.4409 0.4184 0.4227 1.44e-18 7bye-a2-m1-cF_7bye-a2-m1-cE
11 1m1f-a1-m1-cB 105 62 0.1828 0.1619 0.2742 1.93e-04 1m1f-a1-m1-cB_1m1f-a1-m1-cA
12 1m1f-a1-m1-cA 107 64 0.2151 0.1869 0.3125 2.88e-04 1m1f-a1-m1-cB_1m1f-a1-m1-cA
13 7ewj-a2-m1-cD 110 92 0.2366 0.2000 0.2391 0.58 7ewj-a2-m1-cD_7ewj-a2-m1-cE
14 7ewj-a2-m1-cE 113 92 0.2366 0.1947 0.2391 0.60 7ewj-a2-m1-cD_7ewj-a2-m1-cE
15 4ous-a1-m3-cA 132 28 0.1075 0.0758 0.3571 5.6 4ous-a1-m2-cA_4ous-a1-m3-cA
16 4ous-a1-m2-cA 132 28 0.1075 0.0758 0.3571 5.6 4ous-a1-m2-cA_4ous-a1-m3-cA
17 4oul-a1-m1-cC 131 28 0.1183 0.0840 0.3929 5.7 4oul-a1-m1-cC_4oul-a1-m1-cB
18 4oul-a1-m1-cB 132 28 0.1183 0.0833 0.3929 6.0 4oul-a1-m1-cC_4oul-a1-m1-cB
19 4eo3-a1-m1-cB 321 25 0.1505 0.0436 0.5600 7.8 4eo3-a1-m1-cA_4eo3-a1-m1-cB
20 4eo3-a1-m1-cA 321 25 0.1505 0.0436 0.5600 7.8 4eo3-a1-m1-cA_4eo3-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600