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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
YVYQLKDEVGELKGEVRALKDEVKDLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3v86-a1-m3-cA 27 27 1.0000 1.0000 1.0000 5.55e-12 3v86-a1-m2-cA_3v86-a1-m3-cA
2 3v86-a1-m2-cA 27 27 1.0000 1.0000 1.0000 5.55e-12 3v86-a1-m2-cA_3v86-a1-m3-cA
3 6hxy-a1-m2-cA 147 21 0.3704 0.0680 0.4762 2.8 6hxy-a1-m2-cA_6hxy-a1-m2-cB
4 6hxy-a1-m2-cB 153 21 0.3704 0.0654 0.4762 2.9 6hxy-a1-m1-cB_6hxy-a1-m2-cB, 6hxy-a1-m2-cA_6hxy-a1-m2-cB
5 6hxy-a1-m1-cB 153 21 0.3704 0.0654 0.4762 2.9 6hxy-a1-m1-cB_6hxy-a1-m2-cB
6 3o0z-a2-m1-cC 156 20 0.3333 0.0577 0.4500 3.9 3o0z-a2-m1-cC_3o0z-a2-m1-cD
7 3o0z-a2-m1-cD 157 20 0.3333 0.0573 0.4500 3.9 3o0z-a2-m1-cC_3o0z-a2-m1-cD
8 7en2-a1-m1-cB 1410 19 0.3704 0.0071 0.5263 7.4 7en2-a1-m1-cA_7en2-a1-m1-cB
9 7emy-a1-m1-cB 1334 19 0.3704 0.0075 0.5263 7.4 7emy-a1-m1-cA_7emy-a1-m1-cB
10 7emy-a1-m1-cA 1334 19 0.3704 0.0075 0.5263 7.4 7emy-a1-m1-cA_7emy-a1-m1-cB
11 4ehi-a2-m2-cB 493 32 0.5926 0.0325 0.5000 8.3 4ehi-a2-m1-cA_4ehi-a2-m2-cB
12 4ehi-a1-m1-cB 493 32 0.5926 0.0325 0.5000 8.3 4ehi-a1-m1-cA_4ehi-a1-m1-cB
13 4ehi-a2-m1-cA 472 33 0.5926 0.0339 0.4848 8.3 4ehi-a2-m1-cA_4ehi-a2-m2-cB
14 4ehi-a1-m1-cA 472 33 0.5926 0.0339 0.4848 8.3 4ehi-a1-m1-cA_4ehi-a1-m1-cB
15 6k4e-a1-m1-cA 245 21 0.3333 0.0367 0.4286 9.3 6k4e-a1-m1-cA_6k4e-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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