StarFunc result for job id P63244

User Input

>input (317 residues)
MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI
VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA
GYTDNLVRVWQVTIGTR

Proteins with similar structure

Top structural analogs (as identified by Foldseek and TM-align)

Rank	Structure template	TM-score1	TM-score2	Foldseek E-value	Length	ID1	ID2	Download	Description
1	AFDB:B5DFX3	0.997	0.997	2.266E-59	317	0.965	0.965	B5DFX3.pdb.gz	B5DFX3_SALSA Small ribosomal subunit protein RACK1 OS=Salmo salar OX=8030 GN=gnb2l1 PE=2 SV=1
2	AFDB:O18640	0.990	0.987	1.143E-52	318	0.767	0.764	O18640.pdb.gz	GBLP_DROME Small ribosomal subunit protein RACK1 OS=Drosophila melanogaster OX=7227 GN=Rack1 PE=1 SV=2
3	PDB:5a2qg	0.973	0.982	5.984E-52	314	0.991	1.000	5a2qg.pdb.gz	Cryo-Em Structure of Hepatitis C Virus Ires Bound to the Human Ribosome at 3.9 Angstrom Resolution
4	AFDB:G5EB28	0.990	0.993	2.263E-51	316	0.713	0.715	G5EB28.pdb.gz	G5EB28_EMENI GBLP_NEUCR Guanine nucleotide-binding protein beta subunit-like protein (Cross-pathway control WD-repeat protein cpc-2)Gbeta like protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ANIA_04163 PE=3 SV=1
5	AFDB:Q21215	0.979	0.955	1.143E-50	325	0.726	0.708	Q21215.pdb.gz	GBLP_CAEEL Small ribosomal subunit protein RACK1 OS=Caenorhabditis elegans OX=6239 GN=rack-1 PE=1 SV=3
6	AFDB:Q10281	0.975	0.984	7.244E-49	314	0.634	0.640	Q10281.pdb.gz	GBLP_SCHPO Small ribosomal subunit protein RACK1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cpc2 PE=1 SV=3
7	AFDB:O24456	0.964	0.935	1.669E-47	327	0.662	0.642	O24456.pdb.gz	GBLPA_ARATH Small ribosomal subunit protein RACK1z OS=Arabidopsis thaliana OX=3702 GN=RACK1A PE=1 SV=2
8	AFDB:Q9C4Z6	0.969	0.942	6.544E-47	326	0.656	0.638	Q9C4Z6.pdb.gz	GPLPB_ARATH Small ribosomal subunit protein RACK1y OS=Arabidopsis thaliana OX=3702 GN=RACK1B PE=1 SV=1
9	AFDB:P83774	0.975	0.975	1.329E-46	317	0.577	0.577	P83774.pdb.gz	GBLP_CANAL Small ribosomal subunit protein RACK1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ASC1 PE=1 SV=2
10	AFDB:Q8IBA0	0.946	0.929	2.095E-44	323	0.584	0.573	Q8IBA0.pdb.gz	Q8IBA0_PLAF7 Receptor for activated c kinase OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF3D7_0826700 PE=3 SV=1
11	AFDB:D6REE5	0.832	0.822	2.318E-44	321	0.826	0.816	D6REE5.pdb.gz	D6REE5_HUMAN Small ribosomal subunit protein RACK1 (Fragment) OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=1
12	PDB:4v6wAg	0.978	0.975	2.727E-43	318	0.763	0.761	4v6wAg.pdb.gz	Structures of the human and Drosophila 80S ribosome.
13	PDB:3dm0A	0.937	0.443	3.694E-43	675	0.653	0.307	3dm0A.pdb.gz	Structure of a signal transduction regulator, RACK1, from Arabidopsis thaliana.
14	PDB:7pzyh	0.953	0.971	2.795E-40	311	0.580	0.592	7pzyh.pdb.gz	E-site drug specificity of the human pathogen Candida albicans ribosome.
15	PDB:6y57Sg	0.858	0.957	7.495E-37	283	0.883	0.989	6y57Sg.pdb.gz	Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes.
16	PDB:3rfhA	0.847	0.919	3.250E-34	291	0.498	0.543	3rfhA.pdb.gz
17	PDB:4v6iAa	0.887	0.882	1.067E-30	319	0.508	0.505	4v6iAa.pdb.gz	Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
18	PDB:2h9lA	0.862	0.852	1.724E-25	321	0.268	0.265	2h9lA.pdb.gz
19	PDB:5mzhB	0.787	0.616	7.670E-24	415	0.246	0.188	5mzhB.pdb.gz
20	PDB:1vyhC	0.845	0.864	1.093E-23	310	0.297	0.303	1vyhC.pdb.gz

(a)	The query structure is shown in cartoon, while the structural analog is displayed using a backbone trace.
(b)	Ranking of proteins is based on E-value of Foldseek alignment.
(c)	TM-score1 and ID1 are TM-score and sequence identity normalized by query sequence length.
(d)	TM-score2 and ID2 are TM-score and sequence identity normalized by template sequence length.

Proteins with similar sequence

Top sequence homologs in UniProt

Rank	Template	E-value	Bit-score	Length	ID1	ID2	Description
1	B5DFX3	0.0	640	317	0.965	0.965	B5DFX3_SALSA Small ribosomal subunit protein RACK1 OS=Salmo salar OX=8030 GN=gnb2l1 PE=2 SV=1
2	C0H7X9	0.0	624	317	0.943	0.943	C0H7X9_SALSA Small ribosomal subunit protein RACK1 OS=Salmo salar OX=8030 GN=GBLP PE=2 SV=1
3	D6REE5	0.0	522	321	0.830	0.819	D6REE5_HUMAN Small ribosomal subunit protein RACK1 (Fragment) OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=1
4	E9KL35	0.0	653	317	1.000	1.000	E9KL35_HUMAN Small ribosomal subunit protein RACK1 OS=Homo sapiens OX=9606 PE=1 SV=1
5	J3KPE3	0.0	528	273	0.845	0.982	J3KPE3_HUMAN Small ribosomal subunit protein RACK1 OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=1
6	O18640	0.0	515	318	0.767	0.764	GBLP_DROME Small ribosomal subunit protein RACK1 OS=Drosophila melanogaster OX=7227 GN=Rack1 PE=1 SV=2
7	O42248	0.0	636	317	0.956	0.956	GBLP_DANRE Small ribosomal subunit protein RACK1 OS=Danio rerio OX=7955 GN=gnb2l1 PE=1 SV=1
8	P63244	0.0	653	317	1.000	1.000	RACK1_HUMAN Small ribosomal subunit protein RACK1 OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=3
9	P63245	0.0	653	317	1.000	1.000	RACK1_RAT Small ribosomal subunit protein RACK1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3
10	P63247	0.0	653	317	1.000	1.000	RACK1_CHICK Small ribosomal subunit protein RACK1 OS=Gallus gallus OX=9031 GN=RACK1 PE=2 SV=1
11	P68040	0.0	653	317	1.000	1.000	RACK1_MOUSE Small ribosomal subunit protein RACK1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3
12	Q4WQK8	4.90e-175	489	316	0.722	0.725	Q4WQK8_ASPFU G-protein comlpex beta subunit CpcB OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=AFUA_4G13170 PE=3 SV=1
13	G5EB28	3.01e-173	484	316	0.713	0.715	G5EB28_EMENI GBLP_NEUCR Guanine nucleotide-binding protein beta subunit-like protein (Cross-pathway control WD-repeat protein cpc-2)Gbeta like protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ANIA_04163 PE=3 SV=1
14	H0Y8W2	1.19e-166	466	274	0.713	0.825	H0Y8W2_HUMAN Small ribosomal subunit protein RACK1 (Fragment) OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=1
15	Q21215	3.08e-166	467	325	0.729	0.711	GBLP_CAEEL Small ribosomal subunit protein RACK1 OS=Caenorhabditis elegans OX=6239 GN=rack-1 PE=1 SV=3
16	D6R9L0	5.85e-161	452	300	0.688	0.727	D6R9L0_HUMAN Small ribosomal subunit protein RACK1 (Fragment) OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=1
17	D6R9Z1	5.23e-159	445	236	0.675	0.907	D6R9Z1_HUMAN Small ribosomal subunit protein RACK1 (Fragment) OS=Homo sapiens OX=9606 GN=RACK1 PE=1 SV=8
18	Q9LV28	5.86e-156	441	326	0.675	0.656	GPLPC_ARATH Small ribosomal subunit protein RACK1x OS=Arabidopsis thaliana OX=3702 GN=RACK1C PE=1 SV=1
19	O24456	1.34e-154	437	327	0.666	0.645	GBLPA_ARATH Small ribosomal subunit protein RACK1z OS=Arabidopsis thaliana OX=3702 GN=RACK1A PE=1 SV=2
20	Q10281	2.81e-153	433	314	0.634	0.640	GBLP_SCHPO Small ribosomal subunit protein RACK1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cpc2 PE=1 SV=3

(a)	Ranking of proteins is based on the E-value of a BLASTp alignment.
(b)	ID1 and ID2 are sequence identities normalized by the query and template sequence lengths, respectively.

Pfam families

Top Pfam family matches

Rank	Pfam family	E-value	Score	Description
1	PF12894 ANAPC4_WD40	2.6e-07	42.2	Anaphase-promoting complex subunit 4 WD40 domain
2	PF02239 Cytochrom_D1	18	15.4	Cytochrome D1 heme domain
3	PF08662 eIF2A	0.049	25.1	Eukaryotic translation initiation factor eIF2A
4	PF16529 Ge1_WD40	0.085	23.5	WD40 region of Ge1, enhancer of mRNA-decapping protein
5	PF20426 NBCH_WD40	6.7e-13	59.8	Neurobeachin beta propeller domain
6	PF11715 Nup160	0.66	20.3	Nucleoporin Nup120/160
7	PF07676 PD40	5.7e+02	11.9	WD40-like Beta Propeller Repeat
8	PF00400 WD40	2.5e-46	165.9	WD domain, G-beta repeat
9	PF17005 WD40_like	23	15.8	WD40-like domain

(a)	Ranking of Pfam families is based on the E-value provided by HMMsearch.

Protein-protein interaction (PPI) partners

Top PPI partners to 225400.XP_006766909.1

Rank	PPI partner	STRING score	Description
1	225400.XP_006754214.1	0.999	Belongs to the eukaryotic ribosomal protein eS25 family.
2	225400.XP_006755666.1	0.999	40S ribosomal protein S10
3	225400.XP_006758412.1	0.999	Belongs to the PI3/PI4-kinase family
4	225400.XP_006759039.1	0.999	40S ribosomal protein S5
5	225400.XP_006760259.1	0.999	40S ribosomal protein S9
6	225400.XP_006761139.1	0.999	40S ribosomal protein S19
7	225400.XP_006762239.1	0.999	60S ribosomal protein L13 isoform X1
8	225400.XP_006762736.1	0.999	40S ribosomal protein S28 isoform X1
9	225400.XP_006764872.1	0.999	40S ribosomal protein S15-like
10	225400.XP_006764990.1	0.999	40S ribosomal protein S6
11	225400.XP_006766009.1	0.999	40S ribosomal protein S11
12	225400.XP_006766315.1	0.999	Belongs to the universal ribosomal protein uS11 family.
13	225400.XP_006769130.1	0.999	Proto-oncogene serine/threonine-protein kinase mos
14	225400.XP_006769606.1	0.999	40S ribosomal protein S21 isoform X1
15	225400.XP_006770358.1	0.999	60S acidic ribosomal protein P0
16	225400.XP_006771674.1	0.999	40S ribosomal protein S30
17	225400.XP_006772017.1	0.999	40S ribosomal protein S16
18	225400.XP_006773964.1	0.999	60S ribosomal protein L27
19	225400.XP_006775182.1	0.999	60S ribosomal protein L8
20	225400.XP_006777979.1	0.999	40S ribosomal protein S3

A higher STRING score indicates a greater likelihood of interaction.
The query and PPI partners are shown as grey oval and white rectangles, respectively.
Interactions between query and PPI partners are shown by solid black lines. Interactions among PPI partners are by dashed grey lines.
Values in the rectangles are the STRING scores between query and each corresponding PPI partner

Predicted Gene Ontology (GO) Terms

GO term	C-score	Name
GO:0005515	1.000	protein binding

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Molecular Function (MF) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0008150	1.000	biological_process
GO:0009987	0.993	cellular process
GO:0065007	0.983	biological regulation
GO:0050789	0.940	regulation of biological process
GO:0050794	0.908	regulation of cellular process
GO:0071704	0.887	organic substance metabolic process
GO:0044238	0.882	primary metabolic process
GO:0044237	0.881	cellular metabolic process
GO:0006807	0.865	nitrogen compound metabolic process
GO:0043170	0.808	macromolecule metabolic process
GO:0019538	0.777	protein metabolic process
GO:0044260	0.776	cellular macromolecule metabolic process
GO:0050896	0.737	response to stimulus
GO:0034641	0.634	cellular nitrogen compound metabolic process
GO:0010467	0.620	gene expression
GO:1901576	0.549	organic substance biosynthetic process
GO:0044249	0.548	cellular biosynthetic process
GO:0009059	0.544	macromolecule biosynthetic process
GO:0044271	0.535	cellular nitrogen compound biosynthetic process
GO:0034645	0.508	cellular macromolecule biosynthetic process
GO:1901566	0.507	organonitrogen compound biosynthetic process
GO:0006412	0.489	translation
GO:0019222	0.450	regulation of metabolic process
GO:0060255	0.428	regulation of macromolecule metabolic process
GO:0071840	0.353	cellular component organization or biogenesis
GO:0080090	0.323	regulation of primary metabolic process
GO:0051171	0.322	regulation of nitrogen compound metabolic process
GO:2000112	0.319	regulation of cellular macromolecule biosynthetic process
GO:0010468	0.316	regulation of gene expression
GO:0051716	0.307	cellular response to stimulus

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Biological Process (BP) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0005737	0.999	cytoplasm
GO:0043227	0.998	membrane-bounded organelle
GO:0043229	0.996	intracellular organelle
GO:0005829	0.981	cytosol
GO:0031981	0.970	nuclear lumen
GO:0032991	0.953	protein-containing complex
GO:0043232	0.945	intracellular non-membrane-bounded organelle
GO:0005654	0.723	nucleoplasm
GO:0005576	0.481	extracellular region
GO:0031982	0.370	vesicle

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Cellular Component (CC) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Predicted reactions (EC numbers and Rhea reactions)

Reaction	C-score	Name

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