StarFunc result for job id Q13439

User Input

>input (2230 residues)
MFKKLKQKISEEQQQLQQALAPAQASSNSSTPTRMRSRTSSFTEQLDEGTPNRESGDTQS
FAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSTASFDPPSDM
DSEAEDLVGNSDSLNKEQLIQRLRRMERSLSSYRGKYSELVTAYQMLQREKKKLQGILSQ
SQDKSLRRIAELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPM
NVDVLKPLPQLEPQAEVFTKEENPESDGEPVVEDGTSVKTLETLQQRVKRQENLLKRCKE
TIQSHKEQCTLLTSEKEALQEQLDERLQELEKIKDLHMAEKTKLITQLRDAKNLIEQLEQ
DKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKAL
STAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAK
LQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEEL
ELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNK
HNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDK
EIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQE
LEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVE
NLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILLTK
QVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSLTQVYESKLEDGNKEQE
QTKQILVEKENMILQMREGQKKEIEILTQKLSAKEDSIHILNEEYETKFKNQEKKMEKVK
QKAKEMQETLKKKLLDQEAKLKKELENTALELSQKEKQFNAKMLEMAQANSAGISDAVSR
LETNQKEQIESLTEVHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKI
LLFGCEKEEMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDETKLKAHLEKLE
VDLNKSLKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTDEEFQSLKSSHEKSNKSLE
DKSLEFKKLSEELAIQLDICCKKTEALLEAKTNELINISSSKTNAILSRISHCQHRTTKV
KEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQLEEKENQIKSMKADIESLVTEK
EALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISSLSKQLTDLN
VQLQNSISLSEKEAAISSLRKQYDEEKCELLDQVQDLSFKVDTLSKEKISALEQVDDWSN
KFSEWKKKAQSRFTQHQNTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKG
EMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKDIEHK
ELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVKSKEE
ELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYKKGTESHLSELNTK
LQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQGCVQKTYEEKISV
LQRNLTEKEKLLQRVGQEKEETVSSHFEMRCQYQERLIKLEHAEAKQHEDQSMIGHLQEE
LEEKNKKYSLIVAQHVEKEGGKNNIQAKQNLENVFDDVQKTLQEKELTCQILEQKIKELD
SCLVRQKEVHRVEMEELTSKYEKLQALQQMDGRNKPTELLEENTEEKSKSHLVQPKLLSN
MEAQHNDLEFKLAGAEREKQKLGKEIVRLQKDLRMLRKEHQQELEILKKEYDQEREEKIK
QEQEDLELKHNSTLKQLMREFNTQLAQKEQELEMTIKETINKAQEVEAELLESHQEETNQ
LLKKIAEKDDDLKRTAKRYEEILDAREEEMTAKVRDLQTQLEELQKKYQQKLEQEENPGN
DNVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNVYATTVGTPYKGGN
LYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARL
MFTSPRSGIF

Proteins with similar structure

Top structural analogs (as identified by Foldseek and TM-align)

Rank	Structure template	TM-score1	TM-score2	Foldseek E-value	Length	ID1	ID2	Download	Description
1	AFDB:Q13439	1.000	1.000	0.000	2230	1.000	1.000	Q13439.pdb.gz	GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapiens OX=9606 GN=GOLGA4 PE=1 SV=1
2	AFDB:Q91VW5	0.140	0.140	0.000	2238	0.708	0.706	Q91VW5.pdb.gz	GOGA4_MOUSE Golgin subfamily A member 4 OS=Mus musculus OX=10090 GN=Golga4 PE=1 SV=2
3	AFDB:Q9W1R3	0.060	0.083	2.413E-7	1489	0.139	0.209	Q9W1R3.pdb.gz	Q9W1R3_DROME Golgin-245 OS=Drosophila melanogaster OX=7227 GN=Golgin245 PE=1 SV=2
4	AFDB:Q7K4K7	0.058	0.167	2.375E-3	611	0.048	0.175	Q7K4K7.pdb.gz	Q7K4K7_DROME Centrosomin's beautiful sister, isoform A OS=Drosophila melanogaster OX=7227 GN=Golgin97 PE=2 SV=1
5	AFDB:A0A0B4K7K9	0.043	0.043	2.551E-3	2238	0.109	0.109	A0A0B4K7K9.pdb.gz	A0A0B4K7K9_DROME Bruchpilot, isoform J OS=Drosophila melanogaster OX=7227 GN=brp PE=1 SV=1
6	AFDB:Q92805	0.054	0.109	3.159E-3	767	0.065	0.188	Q92805.pdb.gz	GOGA1_HUMAN Golgin subfamily A member 1 OS=Homo sapiens OX=9606 GN=GOLGA1 PE=1 SV=3
7	AFDB:Q7M3S9	0.036	0.076	7.979E-3	943	0.021	0.050	Q7M3S9.pdb.gz	RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum OX=44689 GN=rngB PE=2 SV=2
8	AFDB:Q57UV7	0.058	0.081	1.515E-2	1456	0.079	0.122	Q57UV7.pdb.gz	Q57UV7_TRYB2 Kinesin, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb08.4A8.660 PE=3 SV=1
9	AFDB:Q10411	0.066	0.073	2.324E-2	1957	0.156	0.178	Q10411.pdb.gz	SPO15_SCHPO Sporulation-specific protein 15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spo15 PE=1 SV=1
10	AFDB:Q9CW79	0.062	0.160	2.680E-2	758	0.059	0.173	Q9CW79.pdb.gz	GOGA1_MOUSE Golgin subfamily A member 1 OS=Mus musculus OX=10090 GN=Golga1 PE=1 SV=2
11	PDB:5nr5A	0.021	0.259	1.779	113	0.006	0.115	5nr5A.pdb.gz
12	PDB:7sp4u	0.024	0.197	2.051	158	0.009	0.120	7sp4u.pdb.gz
13	PDB:2l3yA	0.018	0.141	2.203	184	0.007	0.087	2l3yA.pdb.gz
14	PDB:1u96A	0.016	0.225	2.728	69	0.005	0.159	1u96A.pdb.gz	Yeast cox17 solution structure and Copper(I) binding.
15	PDB:2a8jB	0.019	0.106	3.379	313	0.003	0.019	2a8jB.pdb.gz	Crystal Structure of Human Taspase1, a Crucial Protease Regulating the Function of MLL.
16	PDB:5jaaA	0.022	0.178	3.379	102	0.004	0.098	5jaaA.pdb.gz
17	PDB:7qe7U	0.020	0.070	3.379	540	0.009	0.035	7qe7U.pdb.gz	High-resolution structure of the Anaphase-promoting complex (APC/C) bound to co-activator Cdh1
18	PDB:8eaue	0.014	0.268	3.896	72	0.004	0.125	8eaue.pdb.gz
19	PDB:5n9jF	0.015	0.248	4.184	79	0.004	0.101	5n9jF.pdb.gz
20	PDB:2jowA	0.014	0.304	4.493	83	0.002	0.060	2jowA.pdb.gz

(a)	The query structure is shown in cartoon, while the structural analog is displayed using a backbone trace.
(b)	Ranking of proteins is based on E-value of Foldseek alignment.
(c)	TM-score1 and ID1 are TM-score and sequence identity normalized by query sequence length.
(d)	TM-score2 and ID2 are TM-score and sequence identity normalized by template sequence length.

Proteins with similar sequence

Top sequence homologs in UniProt

Rank	Template	E-value	Bit-score	Length	ID1	ID2	Description
1	H0Y6I0	0.0	4336	2250	0.996	0.987	H0Y6I0_HUMAN Golgi autoantigen, golgin subfamily a, 4, isoform CRA_a OS=Homo sapiens OX=9606 GN=GOLGA4 PE=1 SV=2
2	Q13439	0.0	4374	2230	1.000	1.000	GOGA4_HUMAN Golgin subfamily A member 4 OS=Homo sapiens OX=9606 GN=GOLGA4 PE=1 SV=1
3	Q91VW5	0.0	2827	2238	0.711	0.709	GOGA4_MOUSE Golgin subfamily A member 4 OS=Mus musculus OX=10090 GN=Golga4 PE=1 SV=2
4	Q8T8Q5	3.50e-14	81.3	1489	0.058	0.087	Q8T8Q5_DROME SD05887p OS=Drosophila melanogaster OX=7227 GN=Golgin245 PE=2 SV=1
5	Q9W1R3	3.72e-14	81.3	1489	0.043	0.064	Q9W1R3_DROME Golgin-245 OS=Drosophila melanogaster OX=7227 GN=Golgin245 PE=1 SV=2
6	Q57UV7	3.17e-05	52.0	1456	0.055	0.084	Q57UV7_TRYB2 Kinesin, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb08.4A8.660 PE=3 SV=1
7	Q38E32	0.028	42.4	985	0.068	0.154	Q38E32_TRYB2 Protein FAM184A/B N-terminal domain-containing protein OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb09.211.1230 PE=4 SV=1
8	Q586V1	0.16	40.0	3647	0.027	0.016	Q586V1_TRYB2 NUP-1 protein, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=28H13.465 PE=4 SV=1
9	Q06704	0.19	39.3	911	0.031	0.076	IMH1_YEAST Golgin IMH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMH1 PE=1 SV=1
10	Q92805	0.92	37.0	767	0.018	0.053	GOGA1_HUMAN Golgin subfamily A member 1 OS=Homo sapiens OX=9606 GN=GOLGA1 PE=1 SV=3
11	Q9CW79	0.95	37.0	758	0.018	0.054	GOGA1_MOUSE Golgin subfamily A member 1 OS=Mus musculus OX=10090 GN=Golga1 PE=1 SV=2
12	Q38BI0	1.0	37.0	864	0.043	0.110	Q38BI0_TRYB2 Uncharacterized protein OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb10.70.3050 PE=4 SV=1
13	A0A0R4IIN0	1.4	36.6	1121	0.021	0.042	A0A0R4IIN0_DANRE Serine/threonine-protein kinase TAO2 isoform X4 OS=Danio rerio OX=7955 GN=taok2b PE=4 SV=2
14	Q8TZY2	2.9	35.4	1177	0.015	0.029	SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=smc PE=1 SV=2
15	P48725	3.5	35.4	2898	0.012	0.009	PCNT_MOUSE Pericentrin OS=Mus musculus OX=10090 GN=Pcnt PE=1 SV=2
16	Q14789	4.3	35.0	3259	0.030	0.021	GOGB1_HUMAN Golgin subfamily B member 1 OS=Homo sapiens OX=9606 GN=GOLGB1 PE=1 SV=2
17	A3KGV1	4.5	35.0	830	0.042	0.112	ODFP2_MOUSE Outer dense fiber protein 2 OS=Mus musculus OX=10090 GN=Odf2 PE=1 SV=1
18	Q0VF96	4.6	35.0	1302	0.069	0.118	CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens OX=9606 GN=CGNL1 PE=1 SV=2
19	E7EU81	4.9	35.0	3223	0.030	0.021	E7EU81_HUMAN Golgin B1 OS=Homo sapiens OX=9606 GN=GOLGB1 PE=1 SV=2
20	Q8BSS9	4.9	34.7	1257	0.017	0.031	LIPA2_MOUSE Liprin-alpha-2 OS=Mus musculus OX=10090 GN=Ppfia2 PE=1 SV=2

(a)	Ranking of proteins is based on the E-value of a BLASTp alignment.
(b)	ID1 and ID2 are sequence identities normalized by the query and template sequence lengths, respectively.

Pfam families

Top Pfam family matches

Rank	Pfam family	E-value	Score	Description
1	PF01465 GRIP	1.4e-06	39.3	GRIP domain

(a)	Ranking of Pfam families is based on the E-value provided by HMMsearch.

Protein-protein interaction (PPI) partners

Top PPI partners to 9598.ENSPTRP00000044520

Rank	PPI partner	STRING score	Description
1	9598.ENSPTRP00000009096	0.988	ADP-ribosylation factor-like 1
2	9598.ENSPTRP00000036510	0.937	Golgin A1
3	9598.ENSPTRP00000021111	0.837	Uncharacterized protein
4	9598.ENSPTRP00000029985	0.835	ADP-ribosylation factor-like 10
5	9598.ENSPTRP00000050878	0.835	ADP-ribosylation factor-like 16
6	9598.ENSPTRP00000047650	0.827	Uncharacterized protein
7	9598.ENSPTRP00000026120	0.777	ADP-ribosylation factor-like 13B
8	9598.ENSPTRP00000040570	0.768	Golgin B1
9	9598.ENSPTRP00000016254	0.741	Uncharacterized protein
10	9598.ENSPTRP00000023684	0.741	ADP-ribosylation factor related protein 1
11	9598.ENSPTRP00000020807	0.719	Trans-golgi network protein 2
12	9598.ENSPTRP00000011324	0.698	Uncharacterized protein
13	9598.ENSPTRP00000040186	0.692	Uncharacterized protein
14	9598.ENSPTRP00000011349	0.680	Golgin A5
15	9598.ENSPTRP00000056669	0.650	Vesicle transport through interaction with t-SNAREs homolog 1A
16	9598.ENSPTRP00000005223	0.639	Chromosome 10 open reading frame 118
17	9598.ENSPTRP00000031667	0.633	Golgi-associated PDZ and coiled-coil motif containing
18	9598.ENSPTRP00000031272	0.616	Dystonin
19	9598.ENSPTRP00000007095	0.611	RAB30, member RAS oncogene family
20	9598.ENSPTRP00000008740	0.608	Uncharacterized protein

A higher STRING score indicates a greater likelihood of interaction.
The query and PPI partners are shown as grey oval and white rectangles, respectively.
Interactions between query and PPI partners are shown by solid black lines. Interactions among PPI partners are by dashed grey lines.
Values in the rectangles are the STRING scores between query and each corresponding PPI partner

Predicted Gene Ontology (GO) Terms

GO term	C-score	Name
GO:0051020	1.000	GTPase binding

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Molecular Function (MF) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0009987	0.997	cellular process
GO:0016043	0.983	cellular component organization
GO:0065007	0.976	biological regulation
GO:0006810	0.976	transport
GO:0050794	0.966	regulation of cellular process
GO:0051641	0.959	cellular localization
GO:0016192	0.957	vesicle-mediated transport
GO:0008104	0.917	protein localization
GO:0051668	0.916	localization within membrane
GO:0048193	0.892	Golgi vesicle transport
GO:0072659	0.885	protein localization to plasma membrane
GO:0045184	0.869	establishment of protein localization
GO:0048518	0.863	positive regulation of biological process
GO:0048522	0.846	positive regulation of cellular process
GO:0090150	0.797	establishment of protein localization to membrane
GO:0006892	0.745	post-Golgi vesicle-mediated transport
GO:0061951	0.679	establishment of protein localization to plasma membrane
GO:0098876	0.653	vesicle-mediated transport to the plasma membrane
GO:0050793	0.571	regulation of developmental process
GO:0006893	0.455	Golgi to plasma membrane transport
GO:0071702	0.367	organic substance transport
GO:0071705	0.350	nitrogen compound transport
GO:0051128	0.350	regulation of cellular component organization
GO:0046907	0.336	intracellular transport
GO:0015031	0.329	protein transport
GO:0006996	0.310	organelle organization

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Biological Process (BP) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0005794	1.000	Golgi apparatus
GO:0005654	0.997	nucleoplasm
GO:0016020	0.986	membrane
GO:0005829	0.968	cytosol
GO:0098791	0.886	Golgi apparatus subcompartment
GO:0031982	0.881	vesicle
GO:0005802	0.862	trans-Golgi network
GO:0005576	0.851	extracellular region
GO:0071944	0.818	cell periphery
GO:1903561	0.785	extracellular vesicle
GO:0070062	0.784	extracellular exosome
GO:0005886	0.778	plasma membrane
GO:0031090	0.747	organelle membrane

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Cellular Component (CC) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Predicted reactions (EC numbers and Rhea reactions)

Reaction	C-score	Name

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