StarFunc result for job id Q9Y3B7

User Input

>input (192 residues)
MSKLGRAARGLRKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDI
KEGIPLPTKILVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEI
ARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLSSEELAAFQKERAIFLAAQKE
ADLAAQEEAAKK

Proteins with similar structure

Top structural analogs (as identified by Foldseek and TM-align)

Rank	Structure template	TM-score1	TM-score2	Foldseek E-value	Length	ID1	ID2	Download	Description
1	AFDB:Q2YDI0	0.918	0.918	2.034E-33	192	0.917	0.917	Q2YDI0.pdb.gz	RM11_BOVIN Large ribosomal subunit protein uL11m OS=Bos taurus OX=9913 GN=MRPL11 PE=1 SV=2
2	PDB:7l08J	0.834	0.909	1.228E-27	175	0.911	1.000	7l08J.pdb.gz	Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
3	AFDB:Q9VFJ2	0.842	0.825	2.783E-21	196	0.406	0.398	Q9VFJ2.pdb.gz	RM11_DROME Large ribosomal subunit protein uL11m OS=Drosophila melanogaster OX=7227 GN=mRpL11 PE=2 SV=1
4	AFDB:Q9UTK2	0.683	0.900	7.494E-17	144	0.307	0.410	Q9UTK2.pdb.gz	RM19_SCHPO Large ribosomal subunit protein uL11m OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl19 PE=3 SV=1
5	AFDB:P0A7J7	0.678	0.903	6.523E-16	142	0.297	0.401	P0A7J7.pdb.gz	RL11_ECOLI Large ribosomal subunit protein uL11 OS=Escherichia coli (strain K12) OX=83333 GN=rplK PE=1 SV=2
6	AFDB:P53875	0.673	0.810	2.246E-15	158	0.318	0.386	P53875.pdb.gz	RM19_YEAST Large ribosomal subunit protein uL11m OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL19 PE=1 SV=1
7	AFDB:P36238	0.632	0.812	2.704E-15	147	0.286	0.374	P36238.pdb.gz	RL11_THETH Large ribosomal subunit protein uL11 OS=Thermus thermophilus OX=274 GN=rplK PE=1 SV=2
8	AFDB:P0A463	0.632	0.822	2.876E-15	144	0.276	0.368	P0A463.pdb.gz	RL11_STRCO Large ribosomal subunit protein uL11 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=rplK PE=3 SV=1
9	AFDB:Q9MAP3	0.661	0.576	3.683E-15	222	0.297	0.257	Q9MAP3.pdb.gz	RK11_ARATH Large ribosomal subunit protein uL11c OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1
10	AFDB:P9WHE5	0.660	0.881	7.271E-15	142	0.281	0.380	P9WHE5.pdb.gz	RL11_MYCTU Large ribosomal subunit protein uL11 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=rplK PE=1 SV=1
11	AFDB:P56210	0.599	0.835	3.014E-14	133	0.281	0.406	P56210.pdb.gz	RL11_GEOSE Large ribosomal subunit protein uL11 (Fragment) OS=Geobacillus stearothermophilus OX=1422 GN=rplK PE=1 SV=1
12	PDB:6hivAK	0.618	0.381	5.883E-12	323	0.260	0.155	6hivAK.pdb.gz	Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
13	PDB:4v67BK	0.665	0.855	7.534E-12	147	0.292	0.381	4v67BK.pdb.gz	Crystal structure of a translation termination complex formed with release factor RF2.
14	PDB:5adyI	0.646	0.860	5.448E-11	141	0.302	0.411	5adyI.pdb.gz	Hflx is a Ribosome Splitting Factor Rescuing Stalled Ribosomes Under Stress Conditions
15	PDB:3cjqB	0.473	0.704	5.708E-10	121	0.234	0.372	3cjqB.pdb.gz	Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase.
16	PDB:6yxxAK	0.536	0.423	9.809E-9	248	0.229	0.177	6yxxAK.pdb.gz	Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
17	PDB:7z34a	0.477	0.560	7.432E-7	158	0.188	0.228	7z34a.pdb.gz	Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1.
18	PDB:7vb2A	0.286	0.325	1.514E-4	165	0.156	0.182	7vb2A.pdb.gz
19	PDB:8d0kG	0.114	0.061	3.233E-1	456	0.167	0.070	8d0kG.pdb.gz	Structures of the human CST-Pol alpha-primase complex bound to telomere templates.
20	PDB:3e20B	0.172	0.137	4.140E-1	261	0.047	0.034	3e20B.pdb.gz

(a)	The query structure is shown in cartoon, while the structural analog is displayed using a backbone trace.
(b)	Ranking of proteins is based on E-value of Foldseek alignment.
(c)	TM-score1 and ID1 are TM-score and sequence identity normalized by query sequence length.
(d)	TM-score2 and ID2 are TM-score and sequence identity normalized by template sequence length.

Proteins with similar sequence

Top sequence homologs in UniProt

Rank	Template	E-value	Bit-score	Length	ID1	ID2	Description
1	Q9Y3B7	1.81e-135	378	192	1.000	1.000	RM11_HUMAN Large ribosomal subunit protein uL11m OS=Homo sapiens OX=9606 GN=MRPL11 PE=1 SV=1
2	Q2YDI0	6.29e-118	334	192	0.859	0.859	RM11_BOVIN Large ribosomal subunit protein uL11m OS=Bos taurus OX=9913 GN=MRPL11 PE=1 SV=2
3	Q9CQF0	9.55e-114	323	192	0.875	0.875	RM11_MOUSE Large ribosomal subunit protein uL11m OS=Mus musculus OX=10090 GN=Mrpl11 PE=1 SV=1
4	Q9VFJ2	4.62e-46	152	196	0.365	0.357	RM11_DROME Large ribosomal subunit protein uL11m OS=Drosophila melanogaster OX=7227 GN=mRpL11 PE=2 SV=1
5	Q9UTK2	6.56e-37	127	144	0.312	0.417	RM19_SCHPO Large ribosomal subunit protein uL11m OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl19 PE=3 SV=1
6	P53875	1.10e-33	119	158	0.318	0.386	RM19_YEAST Large ribosomal subunit protein uL11m OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL19 PE=1 SV=1
7	P0A7J7	1.11e-29	108	142	0.302	0.408	RL11_ECOLI Large ribosomal subunit protein uL11 OS=Escherichia coli (strain K12) OX=83333 GN=rplK PE=1 SV=2
8	P36238	1.32e-28	105	147	0.302	0.395	RL11_THETH Large ribosomal subunit protein uL11 OS=Thermus thermophilus OX=274 GN=rplK PE=1 SV=2
9	P56210	1.09e-24	95.5	133	0.297	0.429	RL11_GEOSE Large ribosomal subunit protein uL11 (Fragment) OS=Geobacillus stearothermophilus OX=1422 GN=rplK PE=1 SV=1
10	Q9MAP3	5.20e-24	96.3	222	0.281	0.243	RK11_ARATH Large ribosomal subunit protein uL11c OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1
11	P9WHE5	8.66e-24	93.6	142	0.286	0.387	RL11_MYCTU Large ribosomal subunit protein uL11 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=rplK PE=1 SV=1
12	O51354	1.54e-22	90.1	143	0.286	0.385	RL11_BORBU Large ribosomal subunit protein uL11 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=rplK PE=3 SV=1
13	P0A463	1.84e-22	90.1	144	0.281	0.375	RL11_STRCO Large ribosomal subunit protein uL11 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=rplK PE=3 SV=1
14	Q586R9	8.18e-13	67.8	342	0.240	0.135	Q586R9_TRYB2 Ribosomal protein L11, putative OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=30M24.135 PE=1 SV=1
15	Q6FUJ6	0.052	35.4	165	0.188	0.218	Q6FUJ6_CANGA Candida glabrata strain CBS138 chromosome F complete sequence OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=CAGL0F02937g PE=3 SV=1
16	P0CX53	0.19	33.9	165	0.182	0.212	RL12A_YEAST Large ribosomal subunit protein uL11A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL12A PE=1 SV=1
17	P0CX54	0.19	33.9	165	0.182	0.212	RL12B_YEAST Large ribosomal subunit protein uL11B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL12B PE=1 SV=1
18	O13940	1.8	31.6	376	0.115	0.059	GLY1_SCHPO Probable low-specificity L-threonine aldolase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gly1 PE=3 SV=1
19	P0CT83	1.8	30.8	165	0.188	0.218	RL12A_SCHPO Large ribosomal subunit protein uL11A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1
20	P0CT84	1.8	30.8	165	0.188	0.218	RL12B_SCHPO Large ribosomal subunit protein uL11B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1202 PE=3 SV=1

(a)	Ranking of proteins is based on the E-value of a BLASTp alignment.
(b)	ID1 and ID2 are sequence identities normalized by the query and template sequence lengths, respectively.

Pfam families

Top Pfam family matches

Rank	Pfam family	E-value	Score	Description
1	PF00298 Ribosomal_L11	1.8e-21	87.8	Ribosomal protein L11, RNA binding domain
2	PF03946 Ribosomal_L11_N	2.2e-20	83.6	Ribosomal protein L11, N-terminal domain

(a)	Ranking of Pfam families is based on the E-value provided by HMMsearch.

Protein-protein interaction (PPI) partners

Top PPI partners to 9606.ENSP00000308897

Rank	PPI partner	STRING score	Description
1	9606.ENSP00000225969	0.999	Mitochondrial ribosomal protein L27
2	9606.ENSP00000253099	0.999	Mitochondrial ribosomal protein L4
3	9606.ENSP00000260102	0.999	Mitochondrial ribosomal protein L15
4	9606.ENSP00000264995	0.999	Mitochondrial ribosomal protein L3
5	9606.ENSP00000300151	0.999	Mitochondrial ribosomal protein L16
6	9606.ENSP00000306548	0.999	Mitochondrial ribosomal protein L13
7	9606.ENSP00000315017	0.999	Mitochondrial ribosomal protein L1
8	9606.ENSP00000357823	0.999	Mitochondrial ribosomal protein L9
9	9606.ENSP00000360498	0.999	39S ribosomal protein L41, mitochondrial
10	9606.ENSP00000373404	0.999	Mitochondrial ribosomal protein L2
11	9606.ENSP00000377486	0.999	Mitochondrial ribosomal protein L19
12	9606.ENSP00000417602	0.999	Belongs to the universal ribosomal protein uL29 family.
13	9606.ENSP00000288937	0.998	Mitochondrial ribosomal protein L17
14	9606.ENSP00000333837	0.998	39S ribosomal protein L12, mitochondrial
15	9606.ENSP00000354086	0.998	Mitochondrial ribosomal protein L37
16	9606.ENSP00000354525	0.998	Mitochondrial ribosomal protein L24
17	9606.ENSP00000354580	0.998	Mitochondrial ribosomal protein L21
18	9606.ENSP00000423399	0.998	Mitochondrial ribosomal protein L36
19	9606.ENSP00000223324	0.997	Mitochondrial ribosomal protein L32
20	9606.ENSP00000305682	0.997	Mitochondrial ribosomal protein L39

A higher STRING score indicates a greater likelihood of interaction.
The query and PPI partners are shown as grey oval and white rectangles, respectively.
Interactions between query and PPI partners are shown by solid black lines. Interactions among PPI partners are by dashed grey lines.
Values in the rectangles are the STRING scores between query and each corresponding PPI partner

Predicted Gene Ontology (GO) Terms

GO term	C-score	Name
GO:0005515	1.000	protein binding
GO:0003723	1.000	RNA binding
GO:0003735	0.897	structural constituent of ribosome

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Molecular Function (MF) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0071704	0.995	organic substance metabolic process
GO:0044238	0.995	primary metabolic process
GO:0044237	0.995	cellular metabolic process
GO:0006412	0.991	translation
GO:0140053	0.729	mitochondrial gene expression
GO:0032543	0.721	mitochondrial translation
GO:0002181	0.322	cytoplasmic translation

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Biological Process (BP) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

GO term	C-score	Name
GO:0005739	1.000	mitochondrion
GO:0016020	0.999	membrane
GO:0070013	0.999	intracellular organelle lumen
GO:0043232	0.985	intracellular non-membrane-bounded organelle
GO:0032991	0.984	protein-containing complex
GO:0005743	0.981	mitochondrial inner membrane
GO:0005759	0.911	mitochondrial matrix
GO:0005840	0.903	ribosome
GO:0098798	0.900	mitochondrial protein-containing complex
GO:0044391	0.877	ribosomal subunit
GO:0015934	0.848	large ribosomal subunit
GO:0005761	0.837	mitochondrial ribosome
GO:0005762	0.527	mitochondrial large ribosomal subunit

C-score is the confidence score of a predicted GO term. Its value ranges from (0,1], where a higher value indicates a higher confidence prediction.
If a child GO term and its parent term have the same C-score, only the child term is shown in this table.

The graph shows the predicted terms for the Cellular Component (CC) GO aspect. GO terms shown in the table are colored by C-score in the graph:

[0.3,0.4)

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Predicted reactions (EC numbers and Rhea reactions)

Reaction	C-score	Name

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