US-align US986070934

Alignment result for job US986070934

********************************************************************
 * US-align (Version 20211003)                                      *
 * Universal Structure Alignment of Proteins and Nucleic Acids      *
 * References: C Zhang, M Shine, AM Pyle, Y Zhang. (2022) Submitted.*
 * Please email comments and suggestions to yangzhanglab@umich.edu  *
 ********************************************************************

Name of Structure_1: US986070934A.pdb:X (to be superimposed onto Structure_2)
Name of Structure_2: US986070934B.pdb:X
Length of Structure_1: 71 residues
Length of Structure_2: 67 residues

Aligned length= 67, RMSD=   1.20, Seq_ID=n_identical/n_aligned= 0.612
TM-score= 0.81266 (normalized by length of Structure_1: L=71, d0=2.54)
TM-score= 0.84976 (normalized by length of Structure_2: L=67, d0=2.39)
(You should use TM-score normalized by length of the reference structure)

(":" denotes residue pairs of d < 5.0 Angstrom, "." denotes other aligned residues)
cgcuucauauaauccuaaugauaugguuugggaguuucuaccaagagccuuaaacucuugauuaugaagug
  ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.  
--gaucauauaaucgcguggauauggcacgcaaguuucuaccgggcaccguaaauguccgacuaugguc--

#Total CPU time is  0.01 seconds

Superposition (Structure_1 in blue and Structure_2 in red)

(water of Structure_1 and Structure_2 in blue and red, respectively;
non-water ligand of Structure_1 and Structure_2 in cyan and pink, respectively).

Result download

Structure_1 (before superposition): US986070934A.pdb.
Structure_2 (before superposition): US986070934B.pdb.
Structure_1 superposed to Structure_2 (with Structure_2): US986070934.pdb.
Structure_1 superposed to Structure_2 (without Structure_2): US986070934super.pdb.

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