US-align US735192405

Alignment result for job US735192405

********************************************************************
 * US-align (Version 20220511)                                      *
 * Universal Structure Alignment of Proteins and Nucleic Acids      *
 * Reference: C Zhang, M Shine, AM Pyle, Y Zhang. (2022) Nat Methods*
 * Please email comments and suggestions to yangzhanglab@umich.edu  *
 ********************************************************************
Average aligned length= 68, RMSD=   3.51, Seq_ID=n_identical/n_aligned= 0.491
Average TM-score= 0.46705 (normalized by length of longer structure: L=84, d0=3.01)
Average TM-score= 0.44992 (normalized by length of shorter structure: L=92, d0=3.24)
Average TM-score= 0.45992 (normalized by average L=88.00 and d0=3.11)
In the following, seqID=n_identical/L.

>US7351924051.pdb:A	L=98	d0=3.42	seqID=0.372	TM-score=0.50398	*
---gggagagg-uuggccggcu---gg-ugccgcc-ccgg-ga----cuuc-----------------------aa-aucccgugggag---gucccgca-a-gg--gag-----c-uccggaggguucgauucccucccucucc----------cg--c---c-
>US7351924052.pdb:B	L=97	d0=3.39	seqID=0.360	TM-score=0.43430
----gcggaag-uagu-uca-g-u-gg-uagaa-c-accc-ga----cagacgaagcgcuaaaacgug-ggauucu-gucgggggg---------------------------------ucgcggguucgagucccgucuuccgc----------uc--c---a-
>US7351924053.pdb:C	L=88	d0=3.11	seqID=0.424	TM-score=0.49729
----gcggggg-uugc-cgagccu-ggucaaaggc-ggg--gg----acuca----------------------agauccccucc-----------------------cguaggg--guuccgggguucgaauccccgcccccgca------cca----------
>US7351924054.pdb:D	L=87	d0=3.08	seqID=0.386	TM-score=0.47085
----gccgagg-uggu-ggaau-ug-gu-agacac-gcua--c----cuuga----------------------ggugguagugc----------------------ccaauagg--gcuuacggguucaagucccguccucggu----------acca------
>US7351924055.pdb:E	L=86	d0=3.05	seqID=0.394	TM-score=0.41824
----ggccagg-uagc-uc-ag-uugg-uaga-gc-acug-ga-----uaugggca----------ccccc-uaag--uccaggug---------------------------------ucggcgguucgauuccgccccuggccacca----------------
>US7351924056.pdb:F	L=84	d0=2.98	seqID=0.398	TM-score=0.47427
----ggugggg-uucc-cgagc--g-gccaaaggg-agca--g----acugu----------------------aa-ucugccgu-----------------------c-aucga--cuucgaagguucgaauccuucccccacc----------acca------
>US7351924057.pdb:G	L=81	d0=2.88	seqID=0.413	TM-score=0.43496
---ggcgcgggguaccgggcuu---gg-uagcccggggcu-uc-------------------------------------ggc-cgagg---gcga-----------gag-----cccuc--gggguucgauucccccccugcgc----------cg--c-----
>US7351924058.pdb:H	L=91	d0=3.21	seqID=0.292	TM-score=0.40429
---ggaagauc-gucg-ucucc---gg--gaggcg-gcug-g----a---cu--------------------uc-aauc-caguuggggccg-------ccagcggu---------cccgggcagg--cgacuccugugaucuu-----------cc--gcca--
>US7351924059.pdb:I	L=80	d0=2.85	seqID=0.392	TM-score=0.49320
agaagcggauu-uagc-ucagu-u-ggg-ag-agc-gcca--g----acuga----------------------agaucugg-agg---------------------------------uccuguguucgauccacagaauucgca---uuu-------------
>US73519240510.pdb:J	L=92	d0=3.24	seqID=0.355	TM-score=0.45351
---ggccgccgccacc-ggggu---gg-uccccgg-gccggacuuca---------------------------ga---uccggcgcgc---cccga------gu--ggg-----g-cgc--gggguucaauuccccgcggcggc-----------c--gc--ca

#Total CPU time is  0.45 seconds

Superposition (Different Structure in different color)

Result download

Structure_1 (before superposition): US7351924051.pdb.
Structure_2 (before superposition): US7351924052.pdb.
Structure_3 (before superposition): US7351924053.pdb.
Structure_4 (before superposition): US7351924054.pdb.
Structure_5 (before superposition): US7351924055.pdb.
Structure_6 (before superposition): US7351924056.pdb.
Structure_7 (before superposition): US7351924057.pdb.
Structure_8 (before superposition): US7351924058.pdb.
Structure_9 (before superposition): US7351924059.pdb.
Structure_10 (before superposition): US73519240510.pdb.
Structures superposed to each other: US735192405.pdb. (Chains in the superposed structure are sequentially re-assigned chain IDs of A, B, C, ... , J)

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