Search found 3 matches
- Thu Apr 28, 2022 3:30 pm
- Forum: Main Forum
- Topic: Error when using template restraint for I-TASSER standalone
- Replies: 1
- Views: 5274
Error when using template restraint for I-TASSER standalone
Hi, I am using the I-TASSER standalone package to predict the structure of a protein of interest. Specifically, I am interested in using another protein (not in the PDB database) as template to predict the structure. The template pdb file is in fact a model from the I-TASSER webserver and is in the ...
- Mon Apr 25, 2022 4:55 pm
- Forum: Main Forum
- Topic: Differences in the predictions by I-TASSER web server and standalone package
- Replies: 5
- Views: 6581
Re: Differences in the predictions by I-TASSER web server and standalone package
Hi there,
Also wanted to ask: Does the I-TASSER webserver set the command line option -light to True when running calculations?
Thanks,
Sambit.
Also wanted to ask: Does the I-TASSER webserver set the command line option -light to True when running calculations?
Thanks,
Sambit.
- Mon Apr 18, 2022 7:43 pm
- Forum: Main Forum
- Topic: Differences in the predictions by I-TASSER web server and standalone package
- Replies: 5
- Views: 6581
Differences in the predictions by I-TASSER web server and standalone package
Hi, I used I-TASSER to make predictions on a protein of interest and observe significant differences in predictions made by the web-server and the standalone package. The predictions made by the webserver are shown below. As you will notice, the best predicted structure (Model 1) has a TM-score of 0...