Search found 2 matches

by itair
Mon May 09, 2022 7:06 am
Forum: Main Forum
Topic: respre memory issue
Replies: 2
Views: 526

Re: respre memory issue

Hi,
Thank you for the reply.
Unfortunately I cannot send you the MSA since the data is a property of private institute.
However, I will try to describe it:
protein MSA,
5451 sequences
654 AA per sequence ( un gapped length is about 136 AA)
Itai
by itair
Sun Apr 24, 2022 2:32 pm
Forum: Main Forum
Topic: respre memory issue
Replies: 2
Views: 526

respre memory issue

Hi, I have a memory issue with respre: currently I have memory limit of 20 GB on my machine. when I try to run ResPRE it get killed with messege such as: /usr/bin/respre: line 2: 65 Killed python /ResPRE/respre.py $@ or: /usr/bin/respre: line 2: 20 Killed python /ResPRE/respre.py $@ alignment of 74 ...