Predicted model using ITASSER software

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mtarazkar
Posts: 4
Joined: Tue Jun 07, 2022 4:55 pm

Predicted model using ITASSER software

Post by mtarazkar »

Dear Support team,
I face to a new concern about interpreting the results;
I submitted a new job and the results are found here;
https://seq2fun.dcmb.med.umich.edu//I-T ... t/S690053/
Now I am not sure what is the difference between "top 5 final model" and "top 10 threading templates" top 10 Identified stuctural analogs in PDB"?
Which one I should use as the final predicted model for the protein sequence ?
Thanks for your helps
Maryam
xiaogenz
Posts: 157
Joined: Sun Apr 25, 2021 12:02 am

Re: Predicted model using ITASSER software

Post by xiaogenz »

"top 5 final model" shows the final I-TASSER predicted model for your target sequence.
" top 10 Identified stuctural analogs in PDB" shows the templates that may have similar structure to your target sequence, which are found in PDB. These templates are used to guide the structure modelling in the I-TASSER simulation.
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