Question on IonCom_standalone

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tyang39
Posts: 1
Joined: Thu Jul 21, 2022 4:54 pm

Question on IonCom_standalone

Post by tyang39 »

Hello,

I am fairly new at using the IonCom_standalone program. I have done everything that is listed on the readme file, but when the program runs, i am not provided the 'rehtml' file. I am getting an error midway through the program that says:

Can't locate rdfasta.pl in @INC (@INC contains: /home/tristan/perl5/lib/perl5/5.26.1/x86_64-linux-gnu-thread-multi /home/tristan/perl5/lib/perl5/5.26.1 /home/tristan/perl5/lib/perl5/x86_64-linux-gnu-thread-multi /home/tristan/perl5/lib/perl5 /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.26.1 /usr/local/share/perl/5.26.1 /usr/lib/x86_64-linux-gnu/perl5/5.26 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.26 /usr/share/perl/5.26 /home/tristan/perl5/lib/perl5/5.26.0 /home/tristan/perl5/lib/perl5/5.26.0/x86_64-linux-gnu-thread-multi /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at ./GetJSD.pl line 3.
cp: cannot stat 'jsd': No such file or directory

and

cp: cannot stat '/media/tristan/Storage/programs/IonCom_standalone/output/testpdb/jsd.txt': No such file or directory

Please let me know your thoughts. Thank you
jlspzw
Posts: 97
Joined: Tue May 04, 2021 5:04 pm

Re: Question on IonCom_standalone

Post by jlspzw »

Dear user,

It seems you didn't have the PERL5 lib, you can install PERL5 lib and the module based the error message.

Best
IT team
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