1dul B 49 1.8 RF00169 URS000080DD2B_32630 10678824 0006617 0048501 32630 ggcucuguuuaccaggucagguccgaaaggaagcagccaaggcagagcn <<<<<<<<<<....<<<..<.<<<....>>>..>.>>>.>>>>>>>>>> ((((((((((....(((....(((....)))....))).)))))))))) STRUCTURE OF THE RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE; 4.5 S RNA DOMAIN IV 1ffk 0 2706 2.4 RF02540,RF00002 URS000080DFCD_2238 10937989 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa 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...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))()..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[......(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((....(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))....))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..(...)..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))...((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION; 23S RRNA 1ffy T 75 2.2 RF00005 URS000080E234_562 10446055 0030533 0006412 562 gggcuuguagcucaggugguuagagcgcaccccugauaagggugaggucggugguucaaguccacucaggcccac <<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>>.. (((((((..((((.....[...)))).(((((.......))))).....(((((..]....)))))))))))).. INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN; ISOLEUCYL-TRNA 1hc8 C 58 2.8 RF02541,RF02540 URS000080E180_562 12054794,10325228 0003735 0005840 562 nccaggauguaggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggu <<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>> (((((.(((..(((.........)))..))).....(..(((......)))).))))) CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX; 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN 1hc8 D 58 2.8 RF02541,RF02540 URS000080E180_562 12054794,10325228 0003735 0005840 562 nccaggauguaggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggu <<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>> (((((.(((..(((.........)))..))).....(..(((......)))).))))) CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX; 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN 1hq1 B 49 1.52 RF00169 URS000080DD2B_32630 11243816 0006617 0048501 32630 ggcucuguuuaccaggucagguccgaaaggaagcagccaaggcagagcn <<<<<<<<<<....<<<..<.<<<....>>>..>.>>>.>>>>>>>>>> ((((((((((....(((....(((....)))....))).)))))))))) STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE; 4.5S RNA DOMAIN IV 1jbr F 13 2.15 URS000080E0E4_32630 11685244 32630 ggaaccggagcgc ............. ............. Crystal Structure of the Ribotoxin Restrictocin and a 31-mer SRD RNA Inhibitor; 5'-R(*GP*GP*AP*AP*CP*CP*GP*GP*AP*GP*CP*GP*C)-3' 1jbr D 31 2.15 URS000080DEC1_32630 11685244 32630 gcgcuccucaguacgagaggaaccggagcgc <<<<<<<.................>>>>>>> (((((((......(....).....))))))) Crystal Structure of the Ribotoxin Restrictocin and a 31-mer SRD RNA Inhibitor; 31-mer SRD RNA analog 1jbs C 29 1.97 URS000080DE61_32630 11685244 32630 nnnnnnucaguacgauaggaaccnnnnnn <<<<<<.................>>>>>> ((((((......(....).....)))))) Crystal structure of ribotoxin restrictocin and a 29-mer SRD RNA analog; 29-mer sarcin/ricin domain RNA analog 1jbs D 29 1.97 URS000080DE61_32630 11685244 32630 nnnnnnucaguacgauaggaaccnnnnnn <<<<<<.................>>>>>> ((((((......(....).....)))))) Crystal structure of ribotoxin restrictocin and a 29-mer SRD RNA analog; 29-mer sarcin/ricin domain RNA analog 1jbt C 29 2.7 URS000080E1A4_32630 11685244 32630 cgcuccucaguacgagaggaaccggagcg <<<<<<.................>>>>>> ((((((......(....).....)))))) CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN COMPLEXED WITH A 29-MER SARCIN/RICIN DOMAIN RNA ANALOG; 29-MER SARCIN/RICIN DOMAIN RNA ANALOG 1jbt D 29 2.7 URS000080E1A4_32630 11685244 32630 cgcuccucaguacgagaggaaccggagcg <<<<<<.................>>>>>> ((((((......(....).....)))))) CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN COMPLEXED WITH A 29-MER SARCIN/RICIN DOMAIN RNA ANALOG; 29-MER SARCIN/RICIN DOMAIN RNA ANALOG 1jj2 0 2754 2.4 RF02540,RF00002 URS000080DFCD_2238 11483524 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution; 23S RRNA 1k73 A 2754 3.01 RF02540,RF00002 URS000080DFCD_2238 12860128 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit; 23S RRNA 1k8a A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12150912 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui; 23S RRNA 1k9m A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12150912 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui; 23S RRNA 1kc8 A 2754 3.01 RF02540,RF00002 URS000080DFCD_2238 12860128 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit; 23S RRNA 1kd1 A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12150912 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui; 23S RRNA 1kqs 0 2754 3.1 RF02540,RF00002 URS000080DFCD_2238 11828326 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis; 23S RRNA 1l2x A 28 1.25 URS000080DE4C_32630 11904368 32630 ngcgcggcaccguccgcggaacaaacgg ..<<<<<..(((.>>>>>.......))) ..(((((..[[[.))))).......]]] Atomic Resolution Crystal Structure of a Viral RNA Pseudoknot; RNA pseudoknot 1m1k A 2754 3.2 RF02540,RF00002 URS000080DFCD_2238 12150912 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...(((((((((((((.{{)))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui; 23S RRNA 1m90 A 2754 2.8 RF02540,RF00002 URS000080DFCD_2238 12185246 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit; 23S RRNA 1mji C 34 2.5 URS000080E085_562 12515387 562 ggcaccugaccccaugccgaacucagaagugccc <<<<<<<<...............>>>..>>>>>. (((((((((...(.....)...))))..))))). DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX; 5S rRNA fragment 1mji D 34 2.5 URS000080E085_562 12515387 562 ggcaccugaccccaugccgaacucagaagugccc <<<<<<<<<.............>>>>..>>>>>. (((((((((...(.....)...))))..))))). DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX; 5S rRNA fragment 1n8r A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12860128 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of large ribosomal subunit in complex with virginiamycin M; 23S ribosomal RNA 1nji A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12860128 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of chloramphenicol bound to the 50S ribosomal subunit; 23S ribosomal RNA 1q7y A 2754 3.2 RF02540,RF00002 URS000080DFCD_2238 12185246 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit; 23S ribosomal rna 1q81 A 2754 2.95 RF02540,RF00002 URS000080DFCD_2238 12185246 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit.; 23S ribosomal rna 1q82 A 2754 2.98 RF02540,RF00002 URS000080DFCD_2238 12185246 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit; 23S ribosomal rna 1q86 A 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 12185246 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.; 23S ribosomal rna 1qu2 T 75 2.2 RF00005 URS000080E234_1280 10446055 0030533 0006412 1280 gggcuuguagcucaggugguuagagcgcaccccugauaagggugaggucggugguucaaguccacucaggcccac <<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>>.. (((((((..((((.....[...)))).(((((.......))))).....(((((..]....)))))))))))).. INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN; ISOLEUCYL-TRNA 1qvf 0 2754 3.1 RF02540,RF00002 URS000080DFCD_2238 14561884 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui; 23S ribosomal rna 1qvg 0 2754 2.9 RF02540,RF00002 URS000080DFCD_2238 14561884 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<....<.<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>>..>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui; 23S ribosomal rna 1s72 0 2754 2.4 RF02540,RF00002 URS000080DFCD_2238 15184028 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION; 23S ribosomal RNA 1sds E 15 1.8 URS000080DFBD_32630 15130481 32630 ccugauuggugaggg ............... ............... Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA; box H/ACA sRNA 1u6b B 197 3.1 RF00028 URS000080E37C_32630 15175762 0000372 32630 ngccgugugccuugcgccgggaaaccacgcaagggauggugucaaauucggcgaaaccuaagcgcccgcccgggcguauggcaacgccgagccaagcuucgcagccauugcacuccggcugcgaugaagguguagagacuagacggcacccaccuaaggcaaacgcuauggugaaggcauaguccagggaguggcgn .........<<<<<<<..<<....>>.>>>>>>>...<<<<<<....<<<<<<...<<...<<<<<<....>>>>>>..>>...>>>>>><<<...<.<<<<<<<<..........>>>>>>>>.>..>>>.....(((((...>>>>>><<<<...<<<....>>>..>>>>......)))))............. .........(((((((..((....)).)))))))...((((((....((((((...((...((((((....))))))..))...))))))(((...(.((((((((..........)))))))).)..)))...[.[[[[[...))))))((((..((((....))).)))))......]]]]]]............ CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS; 197-MER 1vq4 0 2754 2.7 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""DAA"" bound to the large ribosomal subunit of Haloarcula marismortui; 23S ribosomal rna 1vq5 0 2754 2.6 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.((...(((.........)))...))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""RAA"" bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vq6 0 2754 2.7 RF02540,RF00002 URS000080DFCD_2238 16306996,16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.((...(((.........)))...)).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...(((((((((((((.{{)))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vq7 0 2754 2.5 RF02540,RF00002 URS000080DFCD_2238 16306996,16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.((...(((.........)))...))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""DCA"" bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vq8 0 2754 2.2 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><.<.<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>.>..>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vq9 0 2754 2.4 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vqk 0 2754 2.3 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vql 0 2754 2.3 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""DCSN"" bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vqm 0 2754 2.3 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""DAN"" bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vqn 0 2754 2.4 RF02540,RF00002 URS000080DFCD_2238 16306996,16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vqo 0 2754 2.2 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><.<.<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>.>..>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui; 23S ribosomal rna 1vqp 0 2754 2.25 RF02540,RF00002 URS000080DFCD_2238 16285925 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the transition state analogue ""RAP"" bound to the large ribosomal subunit of haloarcula marismortui; 23S ribosomal rna 1vy4 AX 76 2.6 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.; P-site tRNA 1vy4 BA 2819 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<<......>>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<..<<....>>..>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(..(.(((......)))...))..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))(((((((.......)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(......[..(((((..(((......((((.(((....))).))))...)))..........].)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.; 23S Ribosomal RNA 1vy5 AX 76 2.55 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.; P-site tRNA 1vy5 BA 2819 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<......>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(..(.(((......)))...))..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(......[..(((((..(((......((((.(((....))).))))...)))..........].)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.; 23S Ribosomal RNA 1vy5 CX 76 2.55 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.; P-site tRNA 1vy5 DA 2800 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((....(.(.(......).)..)....)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.; 23S Ribosomal RNA 1vy6 AX 76 2.9 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.; P-site tRNA 1vy6 BA 2819 2.9 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<...<......>...>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((..)))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((....(.(((......)))...)...))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))(((((((.......)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......(((....(....)....)))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.; 23S Ribosomal RNA 1vy6 CX 76 2.9 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.; P-site tRNA 1vy6 DA 2800 2.9 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<.<......<<<<<<<<....>>>>>>>>...>.>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((.(((...(((...(((.((((......((........)).......)))).)))..)).)...))).)))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((...........(((((...((......(((((.((....)).)))))...)).............)))))..))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.; 23S Ribosomal RNA 1vy7 AX 76 2.8 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.; P-site tRNA 1vy7 BA 2819 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<..<......>..>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(....(((......)))....)..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.(((.(.((((((.(......[..(((((..((.......((((..((....))..))))....))..........].)))))).)))))).).))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.; 23S Ribosomal RNA 1vy7 CX 76 2.8 RF00005 URS000041AF00_562 25132179 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......)))))......((((..]....)))).))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.; P-site tRNA 1vy7 DA 2800 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 25132179 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<<....<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>>.......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((....(.(((......)))..)....)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((..))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((.......((((.((....)).))))....)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((.(.........).)))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...(.).......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.; 23S Ribosomal RNA 1w2b 0 2754 3.5 RF02540,RF00002 URS000080DFCD_2238 15334087 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<<..<<<<....>>>>....>>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>>>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....)).....((((...((((..))))...)))).((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..((((.......))))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Trigger Factor ribosome binding domain in complex with 50S; 23S RRNA 1y39 C 58 2.8 RF02541 URS000080E362_562 15734647 0003735 0005840 562 nccaggauguaugcuuagaagcagcaaucauuuaaagagugcguaauagcucacuggu <<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>> (((((.(((..(((.........)))..))).....(...((......)).).))))) Co-evolution of protein and RNA structures within a highly conserved ribosomal domain; 58 Nucleotide Ribosomal 23S RNA Domain 1y39 D 58 2.8 RF02541 URS000080E362_562 15734647 0003735 0005840 562 nccaggauguaugcuuagaagcagcaaucauuuaaagagugcguaauagcucacuggu <<<<<.<<<..<<<<.......>>>>..>>>.........<<......>>...>>>>> (((((.(((..(((.........)))..))).....(...((......)).).))))) Co-evolution of protein and RNA structures within a highly conserved ribosomal domain; 58 Nucleotide Ribosomal 23S RNA Domain 1y3s A 23 2.25 URS000080E167_32630 16403527 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- MPD form; 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1y3s B 23 2.25 URS000080E167_32630 16403527 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- MPD form; 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1yhq 0 2754 2.4 RF02540,RF00002 URS000080E07C_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S Ribosomal RNA 1yi2 0 2754 2.65 RF02540,RF00002 URS000080E07C_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S Ribosomal RNA 1yij 0 2754 2.6 RF02540,RF00002 URS000080E07C_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Telithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S Ribosomal RNA 1yit 0 2754 2.8 RF02540,RF00002 URS000080DF5B_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S RIBOSOMAL RNA 1yj9 0 2754 2.8 RF02540,RF00002 URS000080DF5B_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22; 23S Ribosomal RNA 1yjn 0 2754 3.0 RF02540,RF00002 URS000080E07C_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)......))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S Ribosomal RNA 1yjw 0 2754 2.9 RF02540,RF00002 URS000080E07C_2238 15851032 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui; 23S RIBOSOMAL RNA 1yrj B 22 2.7 URS000080E29E_32630 15849690 32630 ugcgucacaccggugaagucgc ...................... ...................... Crystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotide; Bacterial 16 S Ribosomal RNA A Site Oligonucleotide 1zci A 23 1.65 URS000080E167_32630 16403527 32630 cnugcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- monoclinic form; 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1zci B 23 1.65 URS000080E167_32630 16403527 32630 cnugcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- monoclinic form; 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1zci C 23 1.65 URS000080E167_32630 16403527 32630 cnugcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- monoclinic form; 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1zci D 23 1.65 URS000080E167_32630 16403527 32630 cnugcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS RNA subtype F- monoclinic form; 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' 1zho B 38 2.6 16330048 gggagugaaggaggcuucggccgcgaaacuucacuccc <<<<<<<<<<..<<<....>>>......>>>>>>>>>> ((((((((((..(((....)))......)))))))))) The structure of a ribosomal protein L1 in complex with mRNA; mRNA 1zho D 38 2.6 16330048 gggagugaaggaggcuucggccgcgaaacuucacuccc <<<<<<<<<<..<<<....>>>......>>>>>>>>>> ((((((((((..(((....)))......)))))))))) The structure of a ribosomal protein L1 in complex with mRNA; mRNA 1zho F 38 2.6 16330048 gggagugaaggaggcuucggccgcgaaacuucacuccc <<<<<<<<<<..<<<<..>>>>......>>>>>>>>>> ((((((((((..(((....)))......)))))))))) The structure of a ribosomal protein L1 in complex with mRNA; mRNA 1zho H 38 2.6 16330048 gggagugaaggaggcuucggccgcgaaacuucacuccc <<<<<<<<<<..<<<....>>>......>>>>>>>>>> ((((((((((..(((....)))......)))))))))) The structure of a ribosomal protein L1 in complex with mRNA; mRNA 1zzn B 197 3.37 RF00028 URS000080E37C_32630 16141079,15175762,15547134,6101203 0000372 32630 ngccgugugccuugcgccgggaaaccacgcaagggauggugucaaauucggcgaaaccuaagcgcccgcccgggcguauggcaacgccgagccaagcuucgcagccauugcacuccggcugcgaugaagguguagagacuagacggcacccaccuaaggcaaacgcuauggugaaggcauaguccagggaguggcgn .........<<<<<<<..<<....>>.>>>>>>>...<<<<<<....<<<<<<...<<...<<<<<<....>>>>>>..>>...>>>>>><<<.....<<<<<<<<..........>>>>>>>>....>>>.....(((((...>>>>>><<<<...<<<....>>>..>>>>......)))))............. .........(((((((..((....)).)))))))...((((((....((((((...((...((((((....))))))..))...))))))(((...(.((((((((..........)))))))).)..)))...[.[[[[[...))))))((((...(((....)))..))))......]]]]]]............ Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.; 197-MER 2ann B 23 2.3 URS000080E252_32630 21742260 32630 cgcggaucagucacccaagcgcg <<<...............>>>.. (((...............))).. Crystal structure (I) of Nova-1 KH1/KH2 domain tandem with 25 nt RNA hairpin; 5'-R(*CP*GP*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*CP*G)-3' 2anr B 25 1.94 URS000080DD42_32630 21742260 32630 cncgcggaucagucacccaagcgag <<<<<...............>>>>> (((((...............))))) Crystal structure (II) of Nova-1 KH1/KH2 domain tandem with 25nt RNA hairpin; 5'-R(*CP*(5BU)P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*AP*G)-3' 2f4v A 1507 3.8 RF00177,RF01959,RF01960 URS000080E34A_274 16492561 0003735 0005840 274 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauca ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<.......<<...<...<<<<<<<....>>>>>>>....<<.......>>...>...>>..<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<....<...<<<.....>>>.>.....>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...((.((....)).).))))).)).))))))..((((.......(((....)))......))))....(.(((...(....((((.....)))).....)....))).)......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((.(((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..)))))..))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........((((((...(...((............(.(....).)........(((....).))........))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((.(...(...((.......)).)....).)))))..(..(((((....))))).....)..)))).....).).)))...)).))))).....))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((...((((.(((..((.(((.((((((...(.((((....(((....))).)))).)..)))))).))).))..))).))))....))...)..)..(((((((((....)))))))))}..... 30S ribosome + designer antibiotic; 16S ribosomal RNA 2fcx A 23 2.0 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with neamine; HIV-1 DIS RNA 2fcx B 23 2.0 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with neamine; HIV-1 DIS RNA 2fcy A 23 2.2 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with Neomycin; HIV-1 DIS RNA 2fcy B 23 2.2 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with Neomycin; HIV-1 DIS RNA 2fcz A 23 2.01 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with ribostamycin; HIV-1 DIS RNA 2fcz B 23 2.01 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with ribostamycin; HIV-1 DIS RNA 2fcz C 23 2.01 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with ribostamycin; HIV-1 DIS RNA 2fcz D 23 2.01 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with ribostamycin; HIV-1 DIS RNA 2fd0 A 23 1.8 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with lividomycin; HIV-1 DIS RNA 2fd0 B 23 1.8 URS000080E167_32630 16679451 32630 cungcugaagugcacacagcaag <<<<<<<.........>>>>>>> (((((((.........))))))) HIV-1 DIS kissing-loop in complex with lividomycin; HIV-1 DIS RNA 2gdi X 80 2.05 RF00059 URS000080DDEB_562 16728979 0030976 562 ngacucggggugcccuucugcgugaaggcugagaaauacccguaucaccugaucuggauaaugccagcguagggaaguun <<<<<<<<<..<<.<<<<.....>>>>>>.........>>>>.....<<<...<<<<......>>>>...>>>..>>>>> (((((((((.((((.(((.....))))))......)..)))).....(((...((((......))))...)))..))))) Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate; TPP riboswitch 2hw8 B 36 2.1 URS000080E2CF_32630 17139090 32630 ggggugaaggaggcuucggccgcgaaacuucacccc <<<<<<<<<..<<<....>>>......>>>>>>>>> (((((((((..(((....)))......))))))))) Structure of ribosomal protein L1-mRNA complex at 2.1 resolution.; 36-MER 2nqp F 71 3.5 RF00005 URS00004EADCF_562 17466622 0030533 0006412 562 ccggaugguggaaucgguagacacaagggauaaucccucggcgugcugugcggguucaagucccgcuccgg <<<<<..<<<...........>>>.<<<<<<>.>>>>>.<<<..>>>..<<<<<.......>>>>>>>>>> .((((..(((...........))).(((((...)))))..((..))...(((((.......))))))))). Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA; transfer RNA 2nre F 56 4.0 RF00005 URS00004630EA_562 17466622 0030533 0006412 562 aggugguggaauugguagacacgcuaccgguaguuacggguucaagucccguccuc <<...<<<...........>>><<<<<..>>>>>.<<<<<.......>>>>>.>>. .((..(((...........)))(((((..))))).(((((.......))))))).. Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA; leucyl tRNA 2oij B 23 2.31 URS000080DD3F_32630 12736317 32630 cuugcugaagcgcgcacggcaag ....................... ....................... HIV-1 subtype B DIS RNA extended duplex AuCl3 soaked; 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 2oiy A 23 1.6 URS000080DD3F_32630 20460458 32630 cuugcugaagcgcgcacggcaag ....................... ....................... Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation site; 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 2oiy B 23 1.6 URS000080DD3F_32630 20460458 32630 cuugcugaagcgcgcacggcaag ....................... ....................... Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation site; 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 2oj0 A 23 2.6 URS000080DD3F_32630 20460458 32630 cuugcugaagcgcgcacggcaag ....................... ....................... Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation site MN soaked; 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 2oj0 B 23 2.6 URS000080DD3F_32630 20460458 32630 cuugcugaagcgcgcacggcaag ....................... ....................... Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation site MN soaked; 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' 2otj 0 2754 2.9 RF02540,RF00002 URS000080DFCD_2238 17321546 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. 13-deoxytedanolide bound to the large subunit of Haloarcula marismortui; 23S ribosomal RNA 2otl 0 2754 2.7 RF02540,RF00002 URS000080DFCD_2238 17321546 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Girodazole bound to the large subunit of Haloarcula marismortui; 23S ribosomal RNA 2qa4 0 2753 3.0 RF02540,RF00002 URS000080DFCD_2238 17599351 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<.......>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((.......))).((((((....(((((((((((((..(((...((((.....))))...)))...((....)).....((((...((((..))))...)))).((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.(((((((.((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)).))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit; 23S RIBOSOMAL RNA 2qbz X 153 2.6 RF00380 URS000080E29A_1423 17803910 0010468,0032026 1423 gggcuucguuaggugaggcuccuguauggagauacgcugcugcccaaaaauguccaaagacgccaaugggucaacagaaaucaucgacauaaggugauuuuuaaugcagcuggccuaugccauacagugcuaaagcucuacgauugaagccca <<<<<<<<<..<<<..<<<..<<<<<<<<......<<<<<.<<<<<....<<<<....>>>>....>>>>>.....<<<<<<<<<.......>>>>>>>>>....>>>>>.<..>....>>>>>>>>.>>>...>>>..>>....>>>>>>>. ((((((((([.(((..(((..((((((((......(((((((((((.....(((....))).....))))).....(((((((((......])))))))))..).))))).........)))))))).)))...)))..))....))))))). Structure of the M-Box Riboswitch Aptamer Domain; M-Box RNA, ykoK riboswitch aptamer 2qek A 23 1.8 URS000080E167_32630 18435520 32630 cuugcugaagugcacacagcaag ....................... ....................... HIV-1 subtype F DIS RNA extended duplex form; HIV-1 subtype F DIS genomic RNA 2qek B 23 1.8 URS000080E167_32630 18435520 32630 cuugcugaagugcacacagcaag ....................... ....................... HIV-1 subtype F DIS RNA extended duplex form; HIV-1 subtype F DIS genomic RNA 2qex 0 2754 2.9 RF02540,RF00002 URS000080E276_2238 17664317 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<....<....<<<<<....>>>>>.....>...>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit; 23S ribosomal RNA 2uu9 A 1512 3.1 RF00177,RF01959,RF01960 URS000080E226_300852 17496902 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((......(((((.....((((((......))))))...((((....)))).....)))))..((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin.; 16S RRNA 2uua A 1512 2.9 RF00177,RF01959,RF01960 URS000080E226_300852 17496902 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....(((((......))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((......(((((.(...(((((((....)))))))...((((....))))....))))))..((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.; 16S RRNA 2uub A 1512 2.8 RF00177,RF01959,RF01960 URS000080E226_300852 17496902 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((.(...(((((((....)))))))...((((....))))....))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.; 16S Ribosomal RNA 2uuc A 1512 3.1 RF00177,RF01959,RF01960 URS000080E226_300852 17496902 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....(((((......))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((....(((((((....)))))))...((((....))))....))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin.; 16S Ribosomal RNA 2uxb A 1513 3.1 RF00177,RF01959,RF01960 URS000080E226_300852 17416634 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<.......<<........>>..........<<<<<<<.......<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>..<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>....>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.((...(((..((.((((.(((((.....))))).)))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))....))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(..((((....))))..)....(((....)))...))..))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((.(...(...(.(.....).)).....).)))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((...(..((((....))))..).....))).....)))))))......(....(((.(((........))).)))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(..(((.(.(..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..).).)))...).))...)..)..(((((((((....)))))))))}........... Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.; 16S RIBOSOMAL RNA 2uxc A 1513 2.9 RF00177,RF01959,RF01960 URS000080E226_300852 17416634 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<.........<<....>>........>>>....<.<<<........<<<<.....>>>>..........>>>.>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((...........................))....(..((...(....((((.....)))).....)....))..)......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((......((((((......(((((....)))))......(((....))).....))))))..((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.; 16S RIBOSOMAL RNA 2uxd A 1484 3.2 RF00177,RF01959,RF01960 URS000080DEEC_300852 17416634 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgggguuuuacuccgggucagcggcggacgggugaguaacgcguggguaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgcguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugacccgggacgaaacccccacggggcugacgguaccgggguauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<.......>>>>>.>>.>>>>>......<<.......<<<<<<<<.<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<....>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<........<<<....>>>.........>>>>>.....<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<...<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<...>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<........>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((.....))))...)).)))))......(((......((((((((.((...(((((((.(((((....((((((....)))))).....)))))....((((....))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((.(......((((....)))).....).))....((((...(....(((....)))....)....))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))........(.(((((((..(...(((((((....(((((((....)))))))...(((......)))...)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.((((((....(...(((.....))))......))))))..(..(((((...))))).....)..)))).....).).)))...)).)))))....)))))))).[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((........)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.; 16S RIBOSOMAL RNA 2vpl B 48 2.3 18778715 2190 ggagugaaggaggcucgcgaacucgcgaagccgagaaacuucacuccc <<<<<<<<<..<<<<<<<......>>>.>>>>......>>>>>>>>>. (((((((((..(((((((......))).))))......))))))))). The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii; FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE 2vpl D 46 2.3 18778715 2190 ggagugaaggaggcucgcgaucgcgaagccgagaaacuucacuccc .<<<<<<<<..<<<<<<<<..>>>>.>>>>......>>>>>>>>.. (((((((((..((((((((..)))).))))......)))))))).) The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii; FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE 2vqe A 1513 2.5 RF00177,RF01959,RF01960 URS000080E226_300852 18456657 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>..>.>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((.(...(((((((....)))))))....(((....))).....))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))......((((....)))).........)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding; 16S RRNA 2vqf A 1513 2.9 RF00177,RF01959,RF01960 URS000080E226_300852 18456657 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((....(((((((....)))))))....(((....))).....))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))......((((....)))).........)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding; 16S RRNA 2xnz A 65 1.59 RF00167 URS000080DFC3_1423 21439477 0009113 1423 gacauauaaucgcguggauauggcacgcaaguuucuaccgggcaccguaaauguccgauuauguc <<<<<<...<.<<<<<.....<<>>>>>.><......><<<<<<>>.....>>>>>>..>>>>>> (((((((..(.(((((.....[[))))).)[.....)]((((((]].....))))))..)))))) xpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screening; Guanine riboswitch 2xo0 A 65 1.7 RF00167 URS000080DFC3_1423 21439477 0009113 1423 gacauauaaucgcguggauauggcacgcaaguuucuaccgggcaccguaaauguccgauuauguc <<<<<<...<.<<<<<.....<<>>>>>.><......><<<<<<>>.....>>>>>>..>>>>>> (((((((..(.(((((.....[[))))).)[.....)]((((((]].....))))))..)))))) xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screening; Guanine riboswitch 2xo1 A 65 1.6 RF00167 URS00008FED1E_1423 21439477 0009113 1423 aacauauaaucgcguggauauggcacgcaaguuucuaccgggcaccguaaauguccgauuauguc .<<<<<...<.<<<<<.....<<>>>>>.>........<<<<<<>>.....>>>>>>..>>>>>. .((((((..(.(((((.....[[))))).)[.....)]((((((]].....))))))..))))). xpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenine; Guanine riboswitch 2yie X 54 2.941 RF00050 URS000080E295_190304 21745821 0010181 190304 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaauccau ..............<<<.......>>>.....<<<<......>>>>........ ..............(((.......))).....((((......))))........ Crystal structure of a F. nucleatum FMN riboswitch bound to FMN; FMN RIBOSWITCH 2yif X 53 3.298 RF00050 URS000080E295_190304 21745821 0010181 190304 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaaucca ..............<<<.......>>>.....<<<<......>>>>....... ..............(((.......))).....((((......))))....... Crystal structure of a F. nucleatum FMN riboswitch - Free state; FMN RIBOSWITCH 3bnp B 21 2.7 URS000080DD5F_32630 18346970 32630 gcgucaccccgggcaagucgc ..................... ..................... Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G Mutant); A site of human mitochondrial ribosome, B chain 3bo3 B 197 3.4 RF00028 URS000080E37C_32630 18408159 0000372 32630 ngccgugugccuugcgccgggaaaccacgcaagggauggugucaaauucggcgaaaccuaagcgcccgcccgggcguauggcaacgccgagccaagcuucgcagccauugcacuccggcugcgaugaagguguagagacuagacggcacccaccuaaggcaaacgcuauggugaaggcauaguccagggaguggcgn .........<<<<<<<..<<....>>.>>>>>>>...<<<<<<....<<<<<<...<<...<<<<<<....>>>>>>..>>...>>>>>><<<...<.<<<<<<<<..........>>>>>>>>.>..>>>.....(((((...>>>>>><<<<...<<<....>>>..>>>>......)))))............. .........(((((((..((....)).)))))))...((((((....((.(((...((...((((((....))))))..))...))).))(((...(.((((((((..........)))))))).)..)))...[.[[[[[...))))))((((...(((....)))..))))......]]]]]]............ A relaxed active site following exon ligation by a group I intron; Group I intron P9 3bo4 B 197 3.33 RF00028 URS000080E37C_32630 18408159 0000372 32630 ngccgugugccuugcgccgggaaaccacgcaagggauggugucaaauucggcgaaaccuaagcgcccgcccgggcguauggcaacgccgagccaagcuucgcagccauugcacuccggcugcgaugaagguguagagacuagacggcacccaccuaaggcaaacgcuauggugaaggcauaguccagggaguggcgn .........<<<<<<<..<<....>>.>>>>>>>...<<<<<<....<<<<<<...<<...<<<<<<....>>>>>>..>>...>>>>>><<<...<.<<<<<<<<..........>>>>>>>>.>..>>>.....(((((...>>>>>><<<<...<<<....>>>..>>>>......)))))............. .........(((((((..((....)).)))))))...((((((....((((((...((...((((((....))))))..))...))))))(((...(.((((((((..........)))))))).)..)))...[.[[[[[...))))))((((...(((....)))..))))......]]]]]]............ A relaxed active site following exon ligation by a group I intron; Group I intron P9 3bwp A 356 3.1 RF02001,RF01998 URS000080DD31_182710 18388288 0000373 182710 gugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaggcuaauggaugaguuugcauaacaaaacaaaguccuuucugccaguuggugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggug [..<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((((((((...........(((((......(((<<<<..<<<<........>>>>...>>>>.>>>>>>>.)))..))))))))))...))))))...>>>>>>>>>>>...]>>>>>....<<<<....>>>>...........<<<......<<<.>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>. [<.((((({..(..((((((((...(((.......)))..(((((..A[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}.{)))...)))...((((((.((((...........(((((..[...(((((((..((((.]......))))...))))a]]]]]]].)))..)))))))))....))))))...))))))))..).}.])))))(...((((....))))...).......(((.(....(((.)))...))))....(((((.(((((....))))..)))))).(((((((((((((....)))..)))))))))). Crystal structure of a self-spliced group II intron; Group IIC intron 3c44 B 23 2.0 URS000080E167_32630 18435520 32630 cuugcugaagugcacacagcaag ....................... ....................... Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycin; HIV-1 subtype F genomic RNA 3c5d A 23 1.8 URS000080E167_32630 18435520 32630 cungcugaagugcacacagcaag ....................... ...................... Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin; 'HIV-1 subtype F genomic RNA 3c5d B 23 1.8 URS000080E167_32630 18435520 32630 cungcugaagugcacacagcaag ....................... ...................... Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin; 'HIV-1 subtype F genomic RNA 3c7r B 23 1.7 URS000080E167_32630 18435520 32630 cungcugaagugcacacagcaag ....................... ...................... Crystal Structure of HIV-1 subtype F DIS extended duplex RNA bound to neomycin; HIV-1 subtype F genomic RNA 3cc2 0 2754 2.4 RF02540,RF00002 URS000080E102_2238 18455733,15184028,15520287 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins; 23S RIBOSOMAL RNA 3cc4 0 2754 2.7 RF02540,RF00002 URS000080E102_2238 18455733,12860128 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit; 23S ribosomal RNA 3cc7 0 2754 2.7 RF02540,RF00002 URS000080E214_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaauagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U; 23S ribosomal RNA 3cce 0 2754 2.75 RF02540,RF00002 URS000080DEE9_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccacgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))(.....)........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A; 23S RIBOSOMAL RNA 3ccj 0 2754 3.3 RF02540,RF00002 URS000080E310_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuacuucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<....<....<<<<<....>>>>>.....>...>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<..[[.>>>>>>....<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>...........>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>......<<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>>......<.<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((.(....).))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.((...(((.........)))...))........(..........)..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)......))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))(.....)........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..((....))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).))......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((....(((...((((((((((}}..)))))...))))).[.)))..)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U; 23S RIBOSOMAL RNA 3ccl 0 2754 2.9 RF02540,RF00002 URS000080DD39_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccccgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.; 23S RIBOSOMAL RNA 3ccm 0 2754 2.55 RF02540,RF00002 URS000080E039_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucguuagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..(...)..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U; 23S RIBOSOMAL RNA 3ccq 0 2754 2.9 RF02540,RF00002 URS000080E20E_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacugagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))(.....)........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U; 23S RIBOSOMAL RNA 3ccr 0 2754 3.0 RF02540,RF00002 URS000080E07E_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaaccgagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....((..(((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..))).....)).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.; 23S RIBOSOMAL RNA 3ccs 0 2754 2.95 RF02540,RF00002 URS000080E271_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuaggaauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<....<....<<<<<....>>>>>.....>...>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A; 23S RIBOSOMAL RNA 3ccu 0 2754 2.8 RF02540,RF00002 URS000080E353_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuaggcauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C; 23S RIBOSOMAL RNA 3ccv 0 2754 2.9 RF02540,RF00002 URS000080DE11_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcuaggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A; 23S RIBOSOMAL RNA 3cd6 0 2754 2.75 RF02540,RF00002 URS000080DE11_2238 18455733 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcuaggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin; 23S RIBOSOMAL RNA 3cma 0 2754 2.8 RF02540,RF00002 URS000080E102_2238 18818369 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui; 23S RIBOSOMAL RNA 3cme 0 2754 2.95 RF02540,RF00002 URS000080E102_2238 18818369 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...(((((((((((((.{{)))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui; 50S RIBOSOMAL RNA 3cpw 0 2754 2.7 RF02540,RF00002 URS000080E267_2238 18494460 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccccgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<....<.<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>>..>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI; 23S RIBOSOMAL RNA 3cul C 92 2.8 URS000080DEB5_32630 18548004 32630 ngauggcgaaagccauuuccgcaggccccauugcacuccgggguauuggcguuagguggugguacgagguucgaauccucguaccgcagcca <<<<<<<....>>>>>>.><<<..<<<<<..........>>>>>....>>>...<<<.<<<<<<<<<<<.......>>>>>>>>>>>.>>>. (((((((....)))))).)(((..(((((..........)))))....)))...((..(((((((((((.......)))))))))))..)). Aminoacyl-tRNA synthetase ribozyme; RNA (92-MER) 3cun C 92 3.0 URS000080DEB5_32630 18548004 32630 ngauggcgaaagccauuuccgcaggccccauugcacuccgggguauuggcguuagguggugguacgagguucgaauccucguaccgcagcca <<<<<<<....>>>>>>.><<<..<<<<<..........>>>>>....>>>...<<<.<<<<<<<<<<<.......>>>>>>>>>>>.>>>. (((((((....)))))).)(((..(((((..........)))))....)))...((..(.(((((((((.......))))))))).)..)). Aminoacyl-tRNA synthetase ribozyme; RNA (92-MER) 3cxc 0 2754 3.0 RF02540,RF00002 URS000080DFCD_2238 18947996 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui; 23S RIBOSOMAL RNA 3dig X 174 2.8 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO S-(2-aminoethyl)-L-cysteine; RNA (174-MER) 3dil A 174 1.9 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystal structure of the Thermotoga maritima lysine riboswitch bound to lysine; RNA (174-MER) 3dio X 174 2.4 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, IRIDIUM HEXAMINE SOAK; RNA (174-MER) 3diq A 174 2.7 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to homoarginine; RNA (174-MER) 3dir A 174 2.9 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ngccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to N6-1-iminoethyl-L-Lysine; RNA (174-MER) 3dix A 174 2.9 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, K+ anomalous data; RNA (174-MER) 3diy A 174 2.71 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ngccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun .<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>. (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Mn2+ soak; RNA (174-MER) 3diz A 174 2.85 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine in the Absence of Mg2+; RNA (174-MER) 3dj0 A 174 2.5 RF00168 URS000080E0C5_2336 18784651 0009085 2336 ggccgacggaggcgcgcccgagaugaguaggcugucccaucaggggaggaaucggggacggcugaaaggcgagggcgccgaagggugcagaguuccucccgcucugcaugccuggggguauggggaauacccauaccacugucacggaggucucuccguggagagccgucggun <<<<<<<<<....<<<<<<..<.......<<<<<<<<<.....((((((.....>>>>>>>>>......>..>>>>>>...<<<<<<<<<<<<.))))))>>>>>>>>>.>>><<.<<<<<<<<.....>>>>>>>>.>>.<<<<<<<<<..>>>>>>>>>....>>>>>>>>> (((((((((..(.((((((..(.......(((((((((..(..[[[[[[....))))))))))......)..)))))))..((((((((((((.]]]]]]))))))))).)))((.((((((((.....)))))))).)).((((((((....))))))))....))))))))) Crystallization of the Thermotoga maritima lysine riboswitch bound to L-4-oxalysine; RNA (174-MER) 3dvv A 23 2.0 URS000080E167_32630 32630 cungcugaagugcacacagcaag ....................... ....................... Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe); HIV-1 genomic RNA 3dvv B 23 2.0 URS000080E167_32630 32630 cungcugaagugcacacagcaag ....................... ....................... Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe); HIV-1 genomic RNA 3eog A 388 3.391 RF02001,RF01998 URS000080DD31_182710 18953333 0000373 182710 gugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug {..<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((((((((...........(((((......[[[.....(((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...))))).....]]]...))))))))))...))))))...>>>>>>>>>>>...}>>>>>....<<<<....>>>>...........<<.......<<.<......>>>......>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... [<.((((({..(((((((((((...(((.......)))..(((((..A.[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((...........(((((......(((..(...((((((((..((((........))))...))))a]]]]]]....))))...)..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...)...........(....(.(((....))))....).......(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Co-crystallization showing exon recognition by a group II intron; Group IIC intron 3eoh A 381 3.125 RF02001,RF01998 URS000080DD31_182710 18953333 0000373 182710 gugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccucaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug {..<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((((((((...........(((((......[[[.....(((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...)))))...]]]...))))))))))...))))))...>>>>>>>>>>>...}>>>>>....<<<<....>>>>...........<<<......<<....>>.....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... [<.((((({..(((((((((((...(((.......)))..(((((..A.[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}.{)))...)))...(((((((((((...........(((((.....[(((......((((((((..((((.]......))))...))))a]]]]]]....))))....)))...))))))))))...))))))...))))))))))).}.])))))(...((((....))))...).......((..(....((.....))...).))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Refined group II intron structure; Group IIC intron 3f2q X 109 2.95 RF00050 URS000080DE72_851 19169240 0010181 851 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaaaguagcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauun <<<<<<<<......<<<.......>>>.((<.<<<<....((>>>>.<<<<<.>>>>>..<<<<<.......>>>>>)).>.<<<....))>>>.......>>>>>>>> ((((((((......(((.......))).[[((((((....[[))))..((((.))))...(((((.......)))))]])).(((....]]))).......)))))))) Crystal structure of the FMN riboswitch bound to FMN; FMN riboswitch 3f2t X 109 3.0 RF00050 URS000080DE72_851 19169240 0010181 851 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaaaguagcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauun <<<<<<<<......<<<.......>>>.((<.<<<<....((>>>>.<<<<<.>>>>>..<<<<<.......>>>>>)).>.<<<....))>>>.......>>>>>>>> ((((((((......(((.......))).[[((((((....[[))))..((((.))))...(((((.......)))))]])).(((....]]))).......)))))))) Crystal structure of the FMN riboswitch bound to FMN, iridium hexamine soak.; FMN riboswitch 3f2y X 109 3.2 RF00050 URS000080DE72_851 19169240 0010181 851 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaaaguagcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauun <<<<<<<<......<<<.......>>>.((<.<<<<....((>>>>.<<<<<.>>>>>..<<<<<.......>>>>>)).>.<<<....))>>>.......>>>>>>>> ((((((((......(((.......))).[[((((((....[[))))..((((.))))...(((((.......)))))]])).(((....]]))).......)))))))) Crystal structure of the FMN riboswitch bound to FMN, Mn2+ soak.; FMN riboswitch 3f30 X 109 3.15 RF00050 URS000080DE72_851 19169240 0010181 851 ngaucuucggggcagggugaaauucccgaccggugguauaguccacgaaaguagcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauun <<<<<<<<......<<<.......>>>.((<.<<<<....((>>>>.<<<<<.>>>>>..<<<<<.......>>>>>)).>.<<<....))>>>.......>>>>>>>> ((((((((......(((.......))).[[((((((....[[))))...(((.)))....(((((.......)))))]])).(((....]]))).......)))))))) Crystal structure of the FMN riboswitch bound to FMN, cobalt hexammine soak.; FMN riboswitch 3f4e X 54 3.05 RF00050 URS000080DF4D_32630 19169240 0010181 32630 ggaucuucggggcagggugaaauucccgaccggugguauaguccacgaaagcuu ..............<<<.......>>>.....<<<<......>>>>........ ..............(((.......))).....((((......))))........ Crystal structure of the FMN riboswitch bound to FMN, split RNA.; FMN riboswitch 3f4g X 54 3.01 RF00050 URS000080DF4D_32630 19169240 0010181 32630 ggaucuucggggcagggugaaauucccgaccggugguauaguccacgaaagcuu ..............<<<.......>>>.....<<<<......>>>>........ ..............(((.......))).....((((......))))........ Crystal structure of the FMN riboswitch bound to riboflavin.; FMN riboswitch 3f4g Y 56 3.01 RF00050 URS000080E20B_32630 19169240 0010181 32630 gcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauuc .......<<<<<.......>>>>>.....<<<......>>>............... .......(((((.......))))).....(((......)))............... Crystal structure of the FMN riboswitch bound to riboflavin.; FMN riboswitch 3f4h X 54 3.0 RF00050 URS000080DF4D_32630 19169240 0010181 32630 ggaucuucggggcagggugaaauucccgaccggugguauaguccacgaaagcuu ..............<<<.......>>>.....<<<<......>>>>........ ..............(((.......))).....((((......))))........ Crystal structure of the FMN riboswitch bound to roseoflavin; FMN riboswitch 3f4h Y 56 3.0 RF00050 URS000080E20B_32630 19169240 0010181 32630 gcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauuc .......<<<<<.......>>>>>.....<<<......>>>............... .......(((((.......))))).....(((......)))............... Crystal structure of the FMN riboswitch bound to roseoflavin; FMN riboswitch 3far B 23 2.4 URS000080DD3F_32630 32630 cuugcugaagcgcgcacggcaag ....................... ....................... Cation-dependent self-cleavage activity in the duplex form of the subtype-B HIV-1 RNA Dimerization Initiation Site; RNA (5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3') 3ftf D 22 2.8 URS000080E0D3_32630 19278652 32630 aaccguaggggaaccugcgguu ...................... ...................... Crystal structure of A. aeolicus KsgA in complex with RNA and SAH; 5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*CP*GP*GP*UP*U)-3' 3ftm D 12 2.7 URS000080DE7B_32630 19220054 32630 ccagucggaaca ............ ............ Class II ligase ribozyme product-template duplex, structure 1; 5'-R(*CP*CP*AP*GP*UP*CP*GP*GP*AP*AP*CP*A)-3' 3g6e 0 2754 2.7 RF02540,RF00002 URS000080E102_2238 19362093 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<....<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>..>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit; 23S ribosomal RNA 3g71 0 2754 2.85 RF02540,RF00002 URS000080E102_2238 19362093 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....)).....((((...((((..))))...)))).((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of Bruceantin bound to the large ribosomal subunit; 23S ribosomal RNA 3g78 A 389 2.8 RF02001,RF01998 URS000080DD31_182710 20823550,18388288,18953333 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..(((.((((((((..((((.]......))))...)))).]]]]]]]...)))).)))..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((.(((((....))))..)))))).(((((((((((((....)))..))))))))))... Insight into group II intron catalysis from revised crystal structure; Group II intron 3gx3 A 94 2.7 RF00162 URS000080E047_119072 20006621 0010468 119072 ggcuuaucaagagagguggagggacuggcccgacgaaacccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH; RNA (94-MER) 3i55 0 2754 3.11 RF02540,RF00002 URS000080E102_272569 19738021 0003735 0005840 272569 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<.....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>>....<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>...........>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....)).....((((...((((..))))...)))).((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((...{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))(.....)........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).).....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}...)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit; 23S ribosomal RNA 3i56 0 2754 2.9 RF02540,RF00002 URS000080DF02_272569 19738021 0003735 0005840 272569 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcaucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccggggacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<<<<<.....>>>>>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......((..(((.....))).)...........)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((.))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..)))........(((......)))..)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit; 23S ribosomal RNA 3ibk A 12 2.2 URS000080E0FC_32630 20413582 32630 naggguuagggu ............ ............ Crystal structure of a telomeric RNA quadruplex; RNA (5'-R(*(5BU)P*AP*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3') 3ibk B 12 2.2 URS000080E0FC_32630 20413582 32630 naggguuagggu ............ ............ Crystal structure of a telomeric RNA quadruplex; RNA (5'-R(*(5BU)P*AP*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3') 3igi A 389 3.125 RF02001,RF01998 URS000080DD31_182710 19952115 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug ....<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((([[[[[...........[[[[[......[[[....((((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...))))))....]]]...]]]]]]]]]]...))))))...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....(.((((((((..((((.]......))))...)))).]]]]]]]...)))).)....)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((.(((((....))))..)))))).(((((((((((((....)))..))))))))))... Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron; Group IIC intron 3iin B 197 4.18 RF00028 URS000080E37C_32630 20145044 0000372 32630 ngccgugugccuugcgccgggaaaccacgcaagggauggugucaaauucggcgaaaccuaagcgcccgcccgggcguauggcaacgccgagccaagcuucgcagccauugcacuccggcugcgaugaagguguagagacuagacggcacccaccuaaggcaaacgcuauggugaaggcauaguccagggaguggcgn .........<<<<<<<..<<....>>.>>>>>>>...<<<<<<....<<<<<<...<<...<<<<<......>>>>>..>>...>>>>>><<<.....<<<<<<<<..........>>>>>>>>....>>>.....(((((...>>>>>><<<<...<<<....>>>..>>>>......)))))............. .........(((((((..((....)).)))))))...((((((....((((((...((...((((((....))))))..))...))))))(((...(.((((.(((..........))).)))).)..)))...[.[[[[[...))))))((((...(((....)))..))))......]]]]]]............ Plasticity of the kink turn structural motif; Group I intron 3iin C 22 4.18 URS000080DE17_32630 20145044 32630 aagccacacagaccagacggcc ...................... ...................... Plasticity of the kink turn structural motif; DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3') 3iqn A 94 2.7 RF00162 URS000080E279_32630 20637415 0010468 32630 ggcuuaucaagagagguggagggacuggcccgaugaaacccggcagccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].]((.((....)).))..))))))))). Free-state structural transitions of the SAM-I riboswitch; SAM-I riboswitch 3ktw C 96 3.2 RF01857,RF00169,RF00017 URS000080DE8C_2287 20179341 0006617 0048501,0005786 2287 agauagucguggguucccuuucuggagggagagggaauuccacguugaccgggggaaccggccaggcccggaagggagcaaccgugcccggcuauc .<<<<..<<<<<<<<<<<<<<<<....>>>>>>>>>>>.>>>>>....<<<<<.....<<<.....<<<....>>>.....>>>..>>>>>.>>>> .(((...((((((((((((((((....))))))))))).))))).....((((.....(((.....(((....))).....)))..))))...))) Crystal structure of the SRP19/S-domain SRP RNA complex of Sulfolobus solfataricus; SRP RNA 3ktw D 95 3.2 RF01857,RF00169 URS000080DE8C_2287 20179341 0006617 0048501 2287 agauagucguggguucccuuucuggagggagagggaauuccacguugaccgggggaaccggccaggcccggaagggagcaaccgugcccggcuau ..<<<<.<<<<<<<<<<<<<<<<....>>>>>>>>>>>.>>>>>....<.<<<.....<<<...<.<<<....>>>..>..>>>..>>>.>>>>> ..(((..((.(((((((((((((....))))))))))).)).))....(.(((.....(((.....(((....))).....)))..))).).))) Crystal structure of the SRP19/S-domain SRP RNA complex of Sulfolobus solfataricus; SRP RNA 3l0u A 73 3.0 RF00005 URS000080E264_83333 20203084 0030533 0006412 83333 gcgcggauagcucagucgguagagcaggggauugaaaauccccguguccuugguucgauuccgaguccgcgca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>. (((((((..((((.....[..)))).(((((.......))))).....(((((..]....)))))))))))). The crystal structure of unmodified tRNAPhe from Escherichia coli; Unmodified tRNAPhe 3lqx B 49 1.93 RF00169 URS000080DD2B_32630 12269812 0006617 0048501 32630 ggcucuguuuaccaggucagguccgaaaggaagcagccaaggcagagcn <<<<<<<<<<....<<<....<<<....>>>....>>>.>>>>>>>>>> ((((((((((....(((....(((....)))....))).)))))))))) SRP ribonucleoprotein core complexed with cobalt hexammine; SRP RNA 3mij A 12 2.6 URS000080E0FC_9606 21291211 9606 uaggguuagggu ............ ............ Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand.; RNA (5'-R(*UP*AP*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3') 3nd3 A 16 1.37 URS000080DEAD_32630 21878548 32630 agagaagauuuuuuuu ................ ................ Uhelix 16-mer dsRNA; 5'-R(*AP*GP*AP*GP*AP*AP*GP*AP*UP*UP*UP*UP*UP*UP*UP*U)-3' 3nd4 A 16 1.524 URS000080DDE8_32630 21878548 32630 agagaagaucuucucu ................ ................ Watson-Crick 16-mer dsRNA; 5'-R(*AP*GP*AP*GP*AP*AP*GP*AP*UP*CP*UP*UP*CP*UP*CP*U)-3' 3oto A 1513 3.69 RF00177,RF01959,RF01960 URS000080E226_300852 20962038 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<..<..<<<<<<.....>>>>>>..>..>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<.<<..<<<<<<<....>>>>>>>...<<<......>>>..>>.>>>>>..<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>....>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<.<.<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<...<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>...>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(((..((...........))..))).)))))......(((......(((((((...((...(((((((.(((((....(((((......))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((.......(((....)))......))))....((((....(....((((.....)))).....).....))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))...........(.((((......(.((.(....(((.((......)).)))...(..(....)....)...))).)..((.((....((((((.(....(((((((((....)))...(((......)))...)))))).....((((.((((.((........((.....)).......)).))))..(..((((......)))).....)..)))).....).).)))...))..))))....)))).)...[)).)))))))).(...(((((((.....(((......((((....))))........))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(..(((.(((...(((((.((((((...(.((((....(((....))).)))).)..)))))).)))))...))).)))...).))...)..)..(((((((((....)))))))))}........... Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8); 16S rRNA 3ow2 0 2754 2.7 RF02540,RF00002 URS000080DF99_2238 0003735 0005840 2238 uaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagccauggggagccgcacggaggcgaagaaccauggauuuccgaaugagaaucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaaugugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucucgacgaagucucuuggaacagagcgugauacagggugacaaccccguacucgagaccaguacgacgugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccucgacgaaugaccgacgcgcgagcguccaguaagacucacgggaagccgauguucugucguacguuuugaaaaacgagccagggagugugucugcauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguccugucaaacuccaaacuuacagacgccguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaaguaggggugaaaacuccuauggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucauaccgcaacucgacuaugacgaaaugggaaacggguuaauauucccgugccacuaugcagugaaaguugacgcccuggggucgaucacgcugggcaucgcccagucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcauaguguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcgggggucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcaaagacccuauggagcuuuacugcaggcugucgcugaggacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggcuaucucagccggggacccggcgaagagugcaagagcaaaagauagcuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucgugagcuggguuuagaccgucgugagacaggucggcugcuaucuacuggguguguaggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaa ..<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.....<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<..<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>..>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<..<<.........<<<<<....>>>>>.........>>..>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<..>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<.>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.[[>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<...>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<....>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<..>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>..<<<<.....>>>>......>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<]]..>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>.....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>.. ...(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(.)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......(..(.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......)..)...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((..((....(....(((((....))))).....)...))..))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((..))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.(((....(((((((....)))))))....[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..(...)..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.......(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...((((((((((((..{{.))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((...))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((..)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((..))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))....((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...))))).[.)))).)))))..(((....((((.............))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...))))]))))..)))...)))).. Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit; 23S RIBOSOMAL RNA 3pdr X 161 1.853 RF00380 URS000080E29A_1423 21315082 0010468,0032026 1423 gggcuucguuaggugaggcuccuguauggagauacgcugcugcccaaaaauguccaaagacgccaaugggucaacagaaaucaucgacauaaggugauuuuuaaugcagcuggaugcuuguccuaugccauacagugcuaaagcucuacgauugaagccca <<<<<<<<<..<<<..<<<..<<<<<<<<......<<<<<.<<<<<....<<<<....>>>>....>>>>>.....<<<<<<<<<.......>>>>>>>>>....>>>>>.<<........>>....>>>>>>>>.>>>...>>>..>>....>>>>>>>. ((((((((([.(((..(((..((((((((......(((((((((((....((((....))))....))))).....(((((((((......])))))))))..).))))).((........))....)))))))).)))...)))..))....))))))). Crystal structure of manganese bound M-box RNA; M-box Riboswitch RNA 3pdr A 161 1.853 RF00380 URS000080E29A_1423 21315082 0010468,0032026 1423 gggcuucguuaggugaggcuccuguauggagauacgcugcugcccaaaaauguccaaagacgccaaugggucaacagaaaucaucgacauaaggugauuuuuaaugcagcuggaugcuuguccuaugccauacagugcuaaagcucuacgauugaagccca <<<<<<<<<..<<<..<<<..<<<<<<<<......<<<<<.<<<<<....<<<<....>>>>....>>>>>.....<<<<<<<<<.......>>>>>>>>>....>>>>>.<<........>>....>>>>>>>>.>>>...>>>..>>....>>>>>>>. ((((((((([.(((..(((..((((((((......(((((((((((.....(((....))).....))))).....(((((((((......])))))))))..).))))).((........))....)))))))).)))...)))..))....))))))). Crystal structure of manganese bound M-box RNA; M-box Riboswitch RNA 3pio X 2657 3.2473 RF02540,RF02541 URS000080DEF1_243230 21282615 0003735 0005840 243230 ggucaagauaguaaggguccacgguggaugcccuggcgcuggagccgaugaaggacgcgauuaccugcgaaaagccccgacgagcuggagauacgcuuugacucggggauguccgaauggggaaacccaccucguaagagguauccgcaaggaugggaacucagggaacugaaacaucucaguaccugaaggagaagaaagagaauucgauuccguuaguagcggcgagcgaacccggaucagcccaaucaagccgaaguggcuggaaagcuacaccucagaaggugagaguccuguaggcgaacgagaggucguuguucgugaaacgaugacugaauccgcgcggaccaccgcgcaaggcuaaauacucccagugaccgauagcgcauaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaagagaaccugaaaccguggacuuacaagcagucauggcaccuuaugcguguuauggcgugccuauugaagcaugagccggcgacuuagaccugacgugcgagcuuaaguugaaaaacggaggcggagcgaaagcgaguccgaauagggcggcauuaguacgucgggcuagacucgaaaccaggugagcuaagcaugaccagguugaaacccccggggggcggaggaccgaaccggugccugcugaaacagucucggaugaguuguguuuaggagugaaaagcuaaccgaaccuggagauagcuaguucuccccgaaauguauugagguacagccucggauguugaccauguccuguagagcacucacaaggcuaaaccuuaugaaacuccgaaggggcacgcguuuaguccgggagugaggcugcgagagcuaacuuccguagccgagagggaaacaacccagaccaucagcuaaggucccuaaaugaucgcucagugguuaaggaugugucgucgcauagacagccaggagguuggcuuagaagcagccacccuucaaagagugcguaauagcucacuggucgagugacgaugcgccgaaaaugaucggggcucaagugaucuaccgaagcuauggauucaacucggaguugucugguaggggagcguucaguccgcggagaagccauaccggaaggagugguggagccgacugaagugcggaugccggcaugaguaacgauaaaagaagugagaaucuucuucgccguaaggacaaggguuccuggggaagggucguccgcccagggaaagucgggaccuaaggugaggccgaacggcgcagccgauggacagcaggucaagauuccugcaccgaucauguggagugauggagggacgcauuacgcuauccaaugccaagcuauggcuaugcugguugguacgcucaagggcgaucgggucagaaaaucuaccggucugccucagacguaucgggagcuuccucggaagcgaaguuggaaacgcgacggugccaagaaaagcuucuaaacguugaaacaugauugcccguaccgcaaaccgacacagguguccgagugucaaugcacuaaggcgcgcgagagaacccucguuaaggaacuuugcaaucucaccccguaacuucggaagaagggguccccacgcuucgcguggggcgcagugaauaggcccaggcgacuguuuaccaaaaucacagcacucugccaacacgaacaguggacguauagggugugacgccugcccggugccggaaggucaaguggagcggugcaagcugcgaaaugaagccccggugaacggcuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaggcguaacgaucugggcgcugucucaacgagggacucggugaaauugaauuggcuguaaagaugcggccuacccguagcaggacgaaaagaccccguggagcuuuacuauagucuggcauugggauucggguuacuuggauuucuaaccugaaaaaucacuuucggggaccgugcuuggcggguaguuugacuggggcggucgccucccaaaauguaacggaggcgcccaaaggucaccucaagacgguuggaaaucgucuguagagcgcaaagguagaagguggcuugacugcgagacugacacgucgagcagggaggaaacucgggcuuagugaaccggugguaccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagaguccauaucggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgcuacgggcgcaggagaauugaggggaguugcuccuaguacgagaggaccggagugaacggaccgcuggucucccugcugucguaccaacggcacaugcaggguagcuauguccggaacggauaaccgcugaaagcaucuaagcgggaagccagccccaagaugaguucucccacugagguaagacucccggaagaccaccggguuaagaggccaggcgugcacgcauagcaauguguucagcggacuggugcucaucagucgaggucuugacc .<<<<<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<...<<.))..))..>>......>>>>>>...>>>....<<<....>>><<<<<....>>>>><<<<....>>>>>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...<<<...<<..<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>....>>..<<<<<<<<.........>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>..............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<.......>>>>>>>>>>...<............>.<<<<<<....<<<.<<<<<<<<<<..<<<...<<<....>>>...>>>...<<....>>...<........>.........>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<.....<<<<<.>>>>>......>>>...<<<..<.<<........>>.>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<.<<<<<<...<<<...<<<.<<<<.....>>>>.>>>..>>.>...>>>>>>.>.>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><..<<<<.....>>>>..>....>>>>>><.<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<<..>>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<...<<...<<<<....<<<<..<<<..<<<<<.<<<<.<<...[[....>>>>>><<<<<<<.<<..<<<.<<<<<<...<<.....>>.>>>>>>..>>>..>>>>>>>>>...<<<<<....>>>>>....>>>>>...>>>...>>>>.........>>>>...>>......>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<...>>>>>>>>............<<<<<<<<<..<<...........>>..<<<<<<<.....<<<.....>>>.......>>>>>>>.<<<<<..<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.>>>>>>>>>>>...<<<<<<........>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<....<<<...<<<<<<<<<<<.]].>>>>>>...>>>>>...>>>..>>>>>....<<....<<<<<...........>>>>>....>>..>>>>.......>>>>>>>..<<.>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>. (..(((((......((((((((((.....(((..(...((((.(((......((((((.[......)))......(((((...((......]..))......)))))....)))....(((....)))(((((....)))))(.((....)).)))...((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...(((.......(((...(((((......))))).[(...).((......]..))...)))........((((((((..[......)))))))).......(.((].[[[[)).)...)))......)..))))....)..............((....))....)).........((((....)))).............).....)))))))))).....(.((((((((((.......)))))))))).[.(.(........).).((((((....(((.((((((((((..(.(...(((....)))...).)...((....))...((......)).........)))))))))))))..((.(...((((((.....((((((.(((.((((....(((((.)))))....).)))...(((..(.((........)).).)))..).)).)))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((....(.(.(((((....(((...(((.(((.......))).)))..)).)....))))).)..)...))))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(.(........(((...((..((...........))..))........................)))....).)..))))).))..........]]].)....))))))))))...)))))))(..((...(.)...))..)....))))))(.(((((((.........(((((.((....)).)))))......)))))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[.((((.((...(((...(((....)))...)))...))....(((..........)))..]((((((.((...((...((((....(((((.(((..(((((.((((......{{......))))(((((((.((..((.(.(.((....(.......)..)).)..).))..)))))))))...(((((....)))))....)))))...)))..)))))(..).....))))...))......)).)))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))((((((((...))))))))(...).......(((((((((...(...........)...(((((((.....(((.....))).......))))))).]((((.(((.....((((..((.............(....).............)))))).....))).......((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.........((((.((((((..(((((.(.(.(((((.((((.((((.....))).)))))...((((((........))))))....))))).).)..)))))..(((......[)))((((((..........]))))))(.((...((((((..(.(((((.........)))))...).((.[.[[[)).....))))))...((.....((...{..)).....)).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))........)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).((((.(...(((...(((((((((((.}}.))))))...)))))...)))..)))))....((....((((.............))))....))..))))..]....)))))))..((.))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....)))))..) Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit; RIBOSOMAL 23S RNA 3pip X 2644 3.45 RF02540,RF02541 URS000080DEF1_243230 21282615 0003735 0005840 243230 ggucaagauaguaaggguccacgguggaugcccuggcgcuggagccgaugaaggacgcgauuaccugcgaaaagccccgacgagcuggagauacgcuuugacucggggauguccgaauggggaaacccaccucguaagagguauccgcaaggaugggaacucagggaacugaaacaucucaguaccugaaggagaagaaagagaauucgauuccguuaguagcggcgagcgaacccggaucagcccaaucaagccgaaguggcuggaaagcuacaccucagaaggugagaguccuguaggcgaacgagaggucguuguucgugaaacgaugacugaauccgcgcggaccaccgcgcaaggcuaaauacucccagugaccgauagcgcauaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaagagaaccugaaaccguggacuuacaagcagucauggcaccuuaugcguguuauggcgugccuauugaagcaugagccggcgacuuagaccugacgugcgagcuuaaguugaaaaacggaggcggagcgaaagcgaguccgaauagggcggcauuaguacgucgggcuagacucgaaaccaggugagcuaagcaugaccagguugaaacccccgggggcggaggaccgaaccggugccugcugaaacagucucggaugaguuguguuuaggagugaaaagcuaaccgaaccuggagauagcuaguucuccccgaaauguauugagguacagccucggauguugaccauguccuguagagcacucacaaggcuaaaccuuaugaaacuccgaaggggcacgcguuuaguccgggagugaggcugcgagagcuaacuuccguagccgagagggaaacaacccagaccaucagcuaaggucccuaaaugaucgcucagugguuaaggaugugucgucgcgacagccaggagguuggcuuagagcagccacccuucaaagagugcguaauagcucacuggucgagugacgaugcgccgaaaaugaucggggcucaagugaucuaccgaagcuauggauucaacucguugucugguaggggagcguucaguccgcggagaagccauaccggaaggagugguggagccgacugaagugcggaugccggcaugaguaacgauaaaagaagugagaaucuucuucgccguaaggacaaggguuccuggggaagggucguccgcccagggaaagucgggaccuaaggugaggccgaacggcgcagccgauggacagcaggucaagauuccugcaccgaucaugugagugauggagggacgcauuacgcuauccaaugccaagcuauggcuaugcugguugguacgcucaagggcgaucgggucagaaaaucuaccgguugccucagacguaucgggagcuuccucggaagcgaaguuggaaacgcgacggugccaagaaaagcuucuaaacguugaaacaugauugcccguaccgcaaaccgacacagguguccgagugucaaugcacuaaggcgcgcgagagaacccucguuaaggaacuuugcaaucucaccccguaacuucggaagaagggguccccacgcuucgcguggggcgcagugaauaggcccaggcgacuguuuaccaaaaucacagcacucugccaacacgaacaguggacuauagggugugacgccugcccggugccggaaggucaaguggagcggugcaagcugcgaaaugaagccccggugaacggcuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaggcguaacgaucugggcgcugucucaacgagggacucggugaaauugaauuggcuguaaagaugcggccuacccguagcaggacgaaaagaccccguggagcuuuacuauagucuggcauugggauucgggucuuggauuucuaaccugaaaaaucacuuucggggaccgugcuuggcggguaguuugacuggggcggucgccucccaaaauguaacggaggcgcccaaaggucaccucaagacgguuggaaaucgucuguagagcgcaaagguagaagguggcuugacugcgagacugacacgucgagcagggaggaaacucgggcuuagugaaccggugguaccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagaguccauaucggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgcuacgggcgcaggagaauugaggggaguugcuccuaguacgagaggaccggagugaacggaccgcuggucucccugcugucguaccaacggcacaugcaggguagcuauguccggaacggauaaccgcugaaagcaucuaagcgggaagccagccccaagaugaguucucccacugagguaagacucccggaagaccaccggguuaagaggccaggcgugcacgcauagcaauguguucagcggacuggugcucaucagucgaggucuugacc <<<<<<<<......<<<<<<<<<<<.....<<..<<.<<<<<<<<<......<<<<<<.[...((.>>>.....<<<<<<...<<.))...]..>>......>>>>>>...>>>....<<<....>>><<<<<....>>>>><<<<....>>>>>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...<<<...<<..<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>....>>..<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..>>>......>>.>>>>>..>>..............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<.......>>>>>>>>>>...<............>.<<<<<<....<<<.<<<<<<<<<<..<<<...<<<....>>>...>>>...<<....>>...<........>.........>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<.....<<<<..>>>>......>>>...<<<..<.<<........>>.>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<.<<<<<<...<<<...<<<.<<<<.....>>>>.>>>..>>.>...>>>>>>.>.>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<.....<<<<<.<<...<<<<......>>>>...>>.......<.<<......>>.>.>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><..<<<<..>>>>..>....>>>>>><<<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>.>>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<<..>>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<..<<...<<<<....<<<<..<<<..<<<<<.<<<<.<<...[[....>>>>>><<<<<<<.<<..<<<<.<<<<<...<<.....>>.>>>>>.>>>>..>>>>>>>>>...<<<<<....>>>>>....>>>>>...>>>...>>>>.........>>>>...>>......>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<...>>>>>>>>............<<<<<<<<<..<<...........>>..<<<<<<<.....<<<.....>>>......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>>.......<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<...>>>>>>>>>...<<<<<<........>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..>>>>..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<.<.<<.......>>..>>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<....<<<...<<<<<<<<<<<.]].>>>>>>...>>>>>...>>>..>>>>>....<<.<..<<<<<...........>>>>>...>>>..>>>>.......>>>>>>>..<<.>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>> (..(((((......((((((((((.....(((..((((((((((((.......(((((.....[[.))).....((((((...((.]]......))......))))))...)).....(((....)))(((((....)))))((((....))))))...((((((.........[.........))))).).........((....))...((((.........]..........))))...(((...((..(((...(((((......)))))[[(...).((......]].))...)))....))..(((((((((.[.....))))))))).......(.((].[[[[)).)...)))......)).)))))).))..............((....))....)).........((((....))))..(......)...).....)))))))))).....(.(((((((((.........))))))))).[.(.(........).).((((((....(((.((((((((((...((...(((....)))...))....((....))....(.......).........)))))))))))))..((.(...((((((.....(((((((((..((((....((((()))))....)[)))...((...(.((........)).)..))....))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((...((((.((((((...(((...(((.(((.......))).)))..)).)...)))))).).)))..))))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(.((((((.(..{..(((..(((..((..........))..))).....(..............)..)))....).)))))).).))..........]]].)....))))))))))...)))))))(..((......))..)....))))))(.(((((((.........(((((.((....)).)))))......)))))))..).....))))))(......((.....(.((((.......)))).)((((....((((..((..((((((....((.....))..)))))....[.((((..(...(((...(((....)))...)))...)....(((((........))))).]((((((.((..((...((((.....((((.(((..((((...(((.((...{{....))))).(((((((.((..((.(.(((((...((.....)).))))).).))..)))))))))...(((((....))))).....))))...)))..)))).(..).....))))...))......)).)))))))))).))).....((......)).)))).(((((....)))))..))))..((((....(((((((...........(........((((....(....).....)))).((((((((...))))))))(...).......(((((((((.].(...........)....((((((.....(.(.....).)......))))))...((((.(((..((.((((..(.....((...((((......))))...)).....)))))...))))).......(...........((((.........)))).....)....))))...)).))))))).).......))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((...)))))))))...((((((........))))))....))))).)))..)))))..(((......[)))((((((..........]))))))(..(...(((((((.(.(((((.........)))))...).((.[.[[[))....)))))))...((....(((...{..)))....)).(((....))).).]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((.((.(.((((((...((.......))...))))))...)))..).).......(((.((((((..(.(.(((((......)))))...).).(((((.....))))).....)))))..)...))).......((.((((....))).).))....)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((..(.....(...(((((((((((.}}.))))))...)))))...)....).)))....((....((((.....}.......))))....))..))))..]....)))))))..((.))....(..((((((.......)))))....((((((((.(((.....((((....))))....)))..))))).)))...)..)....)))))..) Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit; RIBOSOMAL 23S RNA 3vrs A 52 2.603 RF01734 URS000080E2F0_93929 22678284 0010628,1902617 93929 gggcgaugaggcccgcccaaacugcccugaaaagggcugauggccucuacug .((((..<<<<<<))))......<<<<<....>>>>>....>>>>>>..... .[[[[..((((((]]]]......(((((....)))))....))))))..... Crystal structure of fluoride riboswitch, soaked in Mn2+; Fluoride riboswitch 4aob A 94 2.95 RF00162 URS000080DF6B_119072 22539525 0010468 119072 ggcuuaucaagagagggcaagagacuggcuugaugacccccggcaaccaaaaauggugccaauuccugcagaggaaacguugaaagaugagcca <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<.<....>.>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((.(....).)))..))))))))). SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine; SAM-I RIBOSWITCH 4aqy A 1510 3.5 RF00177,RF01959,RF01960 URS000080E226_274 22699498 0003735 0005840 274 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<.......<<<<.<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>.>>>>..<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((.(.((..(((((((....)))))))...((........))...))).)))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...((.......))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........ Structure of ribosome-apramycin complexes; 16S RIBOSOMAL RNA 4b3m A 1512 2.9 RF00177,RF01959,RF01960 URS000080DFED_300852 24473108 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<.<<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...((...(((((......)))))....((((....))))...))..)))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....((((.(((.((((....))))).)))...))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal structure of the 30S ribosome in complex with compound 1; 16S RIBOSOMAL RNA 4b3r A 1512 3.0 RF00177,RF01959,RF01960 URS000080DFED_300852 24473108 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<.<<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))...((((....))))...)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal structure of the 30S ribosome in complex with compound 30; 16S RIBOSOMAL RNA 4b3s A 1510 3.15 RF00177,RF01959,RF01960 URS000080DFED_300852 24473108 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggaucuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((.((..(((((((....)))))))...((((....))))...)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((...(..((((....))))..).....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((.((((...(.((((....(((....))).)))).)..)))).))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........ Crystal structure of the 30S ribosome in complex with compound 37; 16S RIBOSOMAL RNA 4b3t A 1512 3.0 RF00177,RF01959,RF01960 URS000080DFED_300852 24473108 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<.......<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>..<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...((..(((((((....)))))))...((((....))))...))..)))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...(...(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((...((((((((((((...(.((((....(((....))).)))).)..))))))))))))...))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal structure of the 30S ribosome in complex with compound 39; 16S RIBOSOMAL RNA 4b5r A 94 2.95 RF00162 URS000080DFE5_119072 23325110 0010468 119072 ggcuuaucaagagagggggagcgacuggcgcgaagaaccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui K-t-7; SAM-I RIBOSWITCH 4c8z C 15 2.503 URS00021ED8E2_300852 24150936 300852 aagccccguaagggn ...<<<<....>>>> ...((((....)))) Cas6 (TTHA0078) product complex; R1 REPEAT RNA CLEAVAGE PRODUCT 4e48 A 20 2.5 URS000080E27B_32630 22731704 32630 gcugcugcugcugcugcugc .................... .................... Structure of 20mer double-helical RNA composed of CUG/CUG-repeats; 5'-R(P*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*C)-3' 4e8k A 388 3.03 RF02001,RF01998 URS000080DE44_182710 23101623 0000373 182710 gugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug ...<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((([[[[[...........[[[[[......[[[....((((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...))))))....]]]...]]]]]]]]]]...))))))...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... [<.((((({..(((((((((((...(((.......)))..(((((....[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....(.((((((((..((((.]......))))...)))).]]]]]]....)))).)....)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate; Group IIC intron 4e8m A 394 3.5 RF02001,RF01998 URS000080DF32_182710 23101623 0000373 182710 ggggugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg [.......<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<......].>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>..<.<<<<....>>>>..>........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... {....[<.((((({..((.((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....(.((((((((..((((.]....}.))))...)))).]]]]]]]...)))).)....)))...))))))))))...))))))...)))))))).))...])))))(...((((....))))...).......(((.(....(((.(....).)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+; Group IIC intron 4e8t A 388 3.34 RF02001,RF01998 URS000080DE44_182710 23101623 0000373 182710 gugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug ...<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((([[[[[...........[[[[[......[[[....((((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...))))))....]]]...]]]]]]]]]]...))))))...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... [<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....(.((((((((..((((.]......))))...)))).]]]]]]]...)))).)....)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset); Group IIC intron 4e8v A 389 3.995 RF02001,RF01998 URS000080DE44_182710 23101623 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug ....<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((((((((...........(((((......[[[.....(((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...))))).....]]]...))))))))))...))))))...>>>>>>>>>>>....>>>>>..<.<<<<....>>>>..>........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<......>>..>>>>>>>>>>... .[<.((((({..(.(((((((((...(((.......)))...((((...[[[[[[[...))))...(((...(((..(((..((((((....)))))).)))...>}..)))...)))...(((((((((((.(.....)...(((((.....[.(.....(.(((.((((..((((.]......))))...)))).]]]]]]]....))).).....)....))))))))))...))))))...))))))))).)...])))))(...((((....))))...).......(...(....((..........))...)..)....(((((..((((....))))...))))).(((((((((.(((....)))...)))))))))... Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+; Group IIC intron 4enb A 52 2.302 RF01734 URS000080E2F0_93929 22678284 0010628,1902617 93929 nggcgaugaggcccgcccaaacugcccugaaaagggcugauggccucuacug .((((..<<<<<<))))......<<<<<....>>>>>....>>>>>>..... .[[[[..((((((]]]]......(((((....)))))....))))))..... Crystal structure of fluoride riboswitch, bound to Iridium; Fluoride riboswitch 4enc A 52 2.272 RF01734 URS000080E2F0_93929 22678284 0010628,1902617 93929 gggcgaugaggcccgcccaaacugcccugaaaagggcugauggccucuacug .((((..<<<<<<))))......<<<<<....>>>>>....>>>>>>..... .[[[[..((((((]]]]......(((((....)))))....))))))..... Crystal structure of fluoride riboswitch; Fluoride riboswitch 4faq A 396 3.11 RF02001,RF01998 URS000080E361_182710 23101623 0000373 182710 guuaugugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg [[[[[.....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<..]]]]].>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .{{{{..[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....((((((((((..((((.]}}}}..))))...)))).]]]]]]]...))))))....)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon; Group IIC intron 4far A 390 2.86 RF02001,RF01998 URS000080E176_182710 23101623 0000373 182710 gugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug .....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... ..[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..((((((((((((..((((.]......))))...)))).]]]]]]]...))))))))..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon; Group IIC intron 4faw A 390 2.7 RF02001,RF01998 URS000080DF32_182710 23101623 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..(.(..(((((((..((((.]......))))...)))).]]]]]]]...)))..).)..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((.(....).)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment; Group IIC intron 4fb0 A 393 3.22 RF02001,RF01998 URS000080E12F_182710 23101623 0000373 182710 ggggugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguagguacgguggugug {.......<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...(((((([[[[[...........[[[[[......[[[....((((((<<<<..<<<<......}.>>>>...>>>>.>>>>>>>...))))))....]]]...]]]]]]]]]]...))))))...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... {....[<.((((({..((.((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....(.((((((((..((((.]....}.))))...)))).]]]]]]]...)))).)....)))...))))))))))...))))))...)))))))).))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+; Group IIC intron 4kvb A 1514 4.198 RF00177,RF01959,RF01960 URS000080E229_262724 0003735 0005840 262724 uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgaggaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucacuuucu .....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>....<<<<.<<<<<....>>>>>.>>>>...<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<.....<<<<<<<....>>>>>>>....................>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ .....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((......((((.(......(((((....))))).....................).))))..((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17; 16S rRNA 4kyy A 17 2.35 URS000080DED2_32630 32630 uucgguuuugauccgga ................. ................. Crystal Structure of RNA 17-mer UUCGGUUUUGAUCCGGA duplex; RNA 17-mer 4kyy B 17 2.35 URS000080DED2_32630 32630 uucgguuuugauccgga ................. ................. Crystal Structure of RNA 17-mer UUCGGUUUUGAUCCGGA duplex; RNA 17-mer 4kzd R 84 2.186 URS000080DEF3_32630 24952597 32630 ngacgcgaccgaaauggugaaggacggguccagugcgaaacacgcacuguugaguagagugugagcuccguaacuggucgcguc .<<<<<<<<<<..<<<<.......<...<<<<<<<<<.....>>>>>>>..>>.........>....>>>>..>.>>>>>>>>> .((((((((((..((((.(.....(...(((((((((.....)))))))..)).........)..).))))..).))))))))) Crystal structure of an RNA aptamer in complex with fluorophore and Fab; RNA (84-MER) 4kze R 84 2.404 URS000080DEF3_32630 24952597 32630 ngacgcgaccgaaauggugaaggacggguccagugcgaaacacgcacuguugaguagagugugagcuccguaacuggucgcguc .<<<<<<<<<<..<<<<...........<.<<<<<<<.....>>>>>>>...>..............>>>>..>.>>>>>>>>> .((((((((((..((((.(.....(...(((((((((.....)))))))..)).........)..).))))..).))))))))) Crystal structure of an RNA aptamer in complex with Fab; RNA (84-MER) 4lf4 A 1513 3.3421 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.(..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lf5 A 1513 3.753 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggaaggugcggcuggaucacuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>........<.<<<<<<<.......<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>..>.>>>>>..<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>>..>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<....<..<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>...>....>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(.((((.(..(((((((....)))))))...((((....)))..).))))).)).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(....(..((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))...)....).))...)..)..(((((((((....)))))))))}........... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lf6 A 1510 3.3052 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggaaggugcggcuggaucaucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<...<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.(..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(.....((.....))...)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........ Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lf7 A 1510 3.1484 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggaaggugcggcuggaucuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<....<<<<<<<....>>>>>>>...<<<<....>>>>....>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((.((..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........ Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lf8 A 1510 3.1484 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggaaggugcggcuggaucuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<....<<<<<<<....>>>>>>>...<<<<....>>>>....>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((.((..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........ Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lf9 A 1512 3.2811 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<...<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.(..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lfa A 1512 3.6461 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>..>.>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<....<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>.>.>....>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.(..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(.....((.....))...)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((...((.((((....))))).).....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.......((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))........).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lfb A 1512 3.009 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(.((((.(..((.((((....)))).))....(((....)))....))))).)).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..((...(((.....)))).)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4lfc A 1512 3.602 RF00177,RF01959,RF01960 URS000080DE21_300852 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((....(((((((....)))))))....(((....))).....))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4pjo 1 48 3.3 URS000080E380_9606 25555158 9606 ngacuuaccuggcagugaggugcacacacugcauaauuugugguagug ...........<<<<<<.........>>>>>>................ ...........((((((.........))))))................ Minimal U1 snRNP; U1 RNA variant (48-MER) with 4-helix junction replaced by kissing loop (HIV-1 (Mal) DIS) and shorter stem-loop 4. 4pjo 3 47 3.3 URS000080E380_9606 25555158 9606 ngacuuaccuggcagugaggugcacacacugcauaauuugugguagu ...........<<<<<<.........>>>>>>............... ...........((((((.........))))))............... Minimal U1 snRNP; U1 RNA variant (48-MER) with 4-helix junction replaced by kissing loop (HIV-1 (Mal) DIS) and shorter stem-loop 4. 4q9q R 84 2.45 URS000080DEF3_32630 24952597 32630 ngacgcgaccgaaauggugaaggacggguccagugcgaaacacgcacuguugaguagagugugagcuccguaacuggucgcguc .<<<<<<<<<<..<<<<.......<...<<<<<<<<<.....>>>>>>>..>>.........>....>>>>...>>>>>>>>>> .((((((((((..((((.(.....(...(((((((((.....)))))))..)).........)..).))))..).))))))))) Crystal structure of an RNA aptamer bound to bromo-ligand analog in complex with Fab; Spinach RNA aptamer 4q9r R 84 3.12 URS000080DEF3_32630 24952597 32630 ngacgcgaccgaaauggugaaggacggguccagugcgaaacacgcacuguugaguagagugugagcuccguaacuggucgcguc .<<<<<<<<<<..<<<<.......<...<<<<<<<<<.....>>>>>>>..>>.........>....>>>>..>.>>>>>>>>> .((((((((((..((((.(.....(...(((((((((.....)))))))..)).........)..).))))..).))))))))) Crystal structure of an RNA aptamer bound to trifluoroethyl-ligand analog in complex with Fab; Spinach RNA aptamer 4qk8 A 122 3.05 RF00379 URS00021ED98F_496866 25086507 0180001 0010468 496866 nguugccgaauccgaaagguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggan ...[[[[....<<....>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....((....))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch; C-di-AMP riboswitch 4qka A 120 3.2 RF00379 URS00021ED98F_496866 25086507 0180001 0010468 496866 nguugccgaauccgaaagguacggaggaaccgcuuuuugggguuaaucugcaguagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggan ...[[[[....<<....>>..(((((....{........[[[[....<<<<<<...>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....((....))..(((((....(.....{.(((((....((((((...))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak; C-di-AMP riboswitch 4r4v A 186 3.07 URS0000868529_5140 26414446 5140 ngcgcugugucgcaaucugcgaagggcgucgucggcccaagcgguaguaagcagggaacucaccuccaaugaaacacauugucguagcaguugacuacuguuaugugauugguagaggcuaagugacgguauuggcguaagccaauaccgcagcacagcacaagcccgcuugcgagauuacagcgc .<<<<<<<<<<.....<<<<...<<<<.......>>>>..>>>>..<<<<<<.<<<..<<<<<<..<<<<<.....>>>>>..<<<<<<<<.....>>>>>>>>......>>>.>>><<<..<<<.<<<<<<<<<<....>>>>>>>>>>...>>>>>>.....>>>>>>>>>..>>>.>>>>>>> .((((((((((.....((((...((((.......))))..))))..((((((.(((..((((((..(((((.....)))))..(((((((.......)))))))......))).)))(((..(((.((((((((((....))))))))))...)))))).....)))))))))..))).))))))) Crystal structure of the VS ribozyme - G638A mutant; VS ribozyme RNA 4rbq A 32 1.05 URS00008FED44_32630 25352146 32630 agagaagaaagggaaauuuuuuuuuuuuuuuu ................................ ................................ 32 base pair oligo(U) RNA; U-Helix RNA from Trypanosome editing 4rgf A 56 3.2008 RF03160 URS000080E1DB_32630 25410397 0003824 32630 uuuuuaaugaagccacaggccugugaggguccuaagccccuaauucagaagggaaa .<<....<<<.[[<<<<<..>>>>>.<<<.(((..]]>>>....>>>..))).>>. .((....(((({{(((((()))))).(((.[[[..}})))...))))..]]].)). Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+; env22 twister ribozyme 4rgf B 56 3.2008 RF03160 URS000080E1DB_32630 25410397 0003824 32630 uuuuuaaugaagccacaggccugugaggguccuaagccccuaauucagaagggaaa .<<....<<<.[[<<<<<..>>>>>.<<<.(((..]]>>>....>>>..))).>>. .((....(((({{(((((()))))).(((.[[[..}})))...))))..]]].)). Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+; env22 twister ribozyme 4rgf C 55 3.2008 RF03160 URS000080E1DB_32630 25410397 0003824 32630 uuuuuaaugaagccacaggccugugaggguccuaagccccuaauucagaagggaa .......<<<<((<<<<<..>>>>>.<<<.[[...))>>>...>>>>...]]... .......(((({{(((((()))))).(((.[[...}})))...))))...]]... Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+; env22 twister ribozyme 4rum A 93 2.6426 RF02683 URS00008116B0_32630 25794617 0050897 32630 nggaacugagcaggcaaugaccagagcggucaugcagccgggcugcgaaagcggcaacagaugauacacgcacaucugugggacaguucccac <<<<<<<<..<.<<<.<<<<<<.....>>>>>>...>>>..<<<<<....>>>>>.<<<<<<<.........>>>>>>>..>.>>>>>>>>.. ((((((((..(.(((.((((((.....))))))...)))..(((((....))))).(((((((.........)))))))..).)))))))).. Crystal structure of the NiCo transition-metal riboswitch bound to cobalt; NiCo riboswitch RNA 4ts0 X 44 2.8 URS000080DEC5_32630 25026079 32630 gacgcgaccgaaugaaauggugaaggacggguccagccggcugn ............................................ ............................................ Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions; Spinach RNA aptamer, bimolecular construct 4ts0 Y 47 2.8 URS000080DEDB_32630 25026079 32630 gcagccggcuuguugaguagagugugagcuccguaacuggucgcgun ............................................... ............................................... Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions; Spinach RNA aptamer, bimolecular construct 4ts2 X 44 2.884 URS000080DEC5_32630 25026079 32630 gacgcgaccgaaugaaauggugaaggacggguccagccggcugn ............................................ ............................................ Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions; Spinach aptamer RNA, bimolecular construct 4ts2 Y 47 2.884 URS000080DEDB_32630 25026079 32630 gcagccggcuuguugaguagagugugagcuccguaacuggucgcgun ............................................... ............................................... Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions; Spinach aptamer RNA, bimolecular construct 4v7w BA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>>.............>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<..>..>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> ((.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(..............)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....................)))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..(((..((.....)).)))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((.........))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.(((.(.(.(()).).).))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...(.........).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....)) Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.; 23S ribosomal RNA 4v7w DA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>>.............>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<..>..>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> ((.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(..............)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....................)))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..(((..((.....)).)))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((.........))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.(((.(.(.(()).).).))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...(.........).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....)) Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.; 23S ribosomal RNA 4v7x BA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...........>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<.<<..>>.>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> .(.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(....(....)....)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....................)))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..((...((.....))..))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((((.......)))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.(.(.(()).).).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...(.........).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....). Structure of the Thermus thermophilus ribosome complexed with erythromycin.; 23S ribosomal RNA 4v7x DA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...........>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<.<<..>>.>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> .(.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(....(....)....)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....................)))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..((...((.....))..))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((((.......)))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.(.(.(()).).).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...(.........).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....). Structure of the Thermus thermophilus ribosome complexed with erythromycin.; 23S ribosomal RNA 4v7y BA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<...<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>..>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...........>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<.<<..>>.>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> ((.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...(((.((((.....)))).)))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(...((....))...)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((..................))))))))).))..........]]].)....))))))))))...)))))))((((((.........))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..((...((.....))..))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((((.......)))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.(.(.(()).).).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((.((.........)).))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...((.......)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....)) Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.; 23S ribosomal RNA 4v7y DA 2725 3.0 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<...<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>..>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...........>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<.<<..>>.>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> ((.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...(((.((((.....)))).)))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(...((....))...)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((..................))))))))).))..........]]].)....))))))))))...)))))))((((((.........))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((..((...((.....))..))..).....)))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((((.......)))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.(.(.(()).).).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((.((.........)).))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...((.......)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....)) Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.; 23S ribosomal RNA 4v7z BA 2725 3.1 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>>.......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<.<<<<<<.<<.....>>>>>>>>......>>>>>>>>>..>>>.............>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<..>..>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<.<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> .(.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...(((((((.......)))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(....(....)....)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((.(....................).)))))).))..........]]].)....))))))))))...)))))))(((((((.......)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((.(..((...((.....))..))..)......))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((.........))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((.((.(.(()).).)).)).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(.(((.........))).)...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((...............))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...................(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....). Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.; 23S ribosomal RNA 4v7z DA 2725 3.1 RF02540,RF02541,RF00002 URS000080E25D_300852 20876130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcgccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>.....<<<<<<<<.<.<<...<<<<..<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>...>>>>..>>>.>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<....>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..................>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>>.......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<.<<<<<<.<<.....>>>>>>>>......>>>>>>>>>..>>>.............>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<..>..>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<.<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>...<<.......>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> .(.......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((....))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...(((((((.......)))))))....(((((((((....(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)...))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((((((((....)))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))..)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(....(....)....)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((.(....................).)))))).))..........]]].)....))))))))))...)))))))(((((((.......)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((.(((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((.(..(((..((.....)).)))..)......))))))))..)))(...........))))))...)))..)))))(..).....))))...))...))).))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((.........))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((.((.(.(()).).)).)).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(.(((.........))).)...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((...............))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))...................(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...)))).....). Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.; 23S ribosomal RNA 4v9f 0 2808 2.404 RF02540,RF00002 URS000080E02E_272569 23695244,10937989 0003735 0005840 272569 acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugccaagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagauuuccgaaugagaaucucucuaacaauugcuucgcgcaaugaggaaccccgagaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugucguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacgggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaagucucuuggaauagagcgugauacagggugacaaccccguacugaagaccaguacgcugugcgguagugccagaguagcggggguuggauaucccucgcgaauaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagugaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcgaaauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucccuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccgauguucugucguacguuuugnaaaacgagccagggagugugucuguauggcaagucuaaccggaguauccggggaggcacagggaaaccgacauggccgcagggcuuugcccgagggccgccgucuucaagggcggggagccauguggacacgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaaaggcacguggaagucuguuagaguugguguccuacaauacccucucgugaucuauguguaggggugaaaggcccaucgaguccggcaacagcugguuccaaucgaaacaugucgaagcaugaccuccgccgagguagucugugagguagagcgaccgauugguguccuccugucaaacuccaaacuuacagacgcuguuugacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaacaacccagagauagguuaagguccccaaguguggauuaaguguaauccucugaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcuacccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgcccaaaaugaucgggacucaaauccaccaccgagaccuguccguaccacucauacugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgagagcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgauagucgggugagaaccccgacggccuaauggauaaggguuccucagcacugcugaucagcugaggguuagccgguccuaagucucaccgcaacucgacugagacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaaguugacgcccuggggucgaucacgccgggcauucgcccggucgaaccguccaacuccguggaagccguaauggcaggaagcggacgaacggcggcauagggaaacgugauucaaccuggggcccaugaaaagacgagcaugauguccguaccgagaaccgacacagguguccauggcggcgaaagccaaggccugucgggagcaaccaacguuagggaauucggcaaguuagucccguaccuucggaagaagggaugccugcuccggaacggagcaggucgcagugacucggaagcucggacugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacggucacugaauccugcccagugcagguaucugaacaccucguacaagaggacgaaggaccugucaacggcggggguuaugacccucuuaagguagcguaguaccuugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacugucccaacguugggcccggugaacuguacauuccagugcggagucuggagacacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcugagacguggucgccgaucggugacugcgacucucacuccgggaggaggacaccgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauaucgagcgcgcccuauggucaucucagccgggacagagacccggcgaagagugcaagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugacgcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauugaugacagaaaagcuacccuagggauaacagagucgucacucgcaagagcacauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugcccgugcagaagcgggcaagggugaggunnuucgccuauuaaaggaggucgugagcugggnuuagaccgucgugagacaggucggcugcuaucuacuggguguguaauggugucugacaagaacgaccguauaguacgagaggaacuacgguugguggccacugguguaccgguuguucgagagagcacgugccggguagccacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuuggaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacucggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacagaccaaagc ....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.((..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>...>>>....<<<...>>>.......<<<<<.....>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<.....>>...<<<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<......<<<<......>>>>.((......<<<.....))>>>....>>>>>>>......>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>......<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))...............<<....>>....))..........<<<.....>>>...................>>>>>>>>>>>.......<<<<<<<<<<....<.<<<<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<...<<<<...>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<<.....<<..<<......>>..>>...>>.>...>>>>>>>>>>>>.......>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.....<<...........<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<.......>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<........<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<<...<<<<<<<<...<<<<<<<<<<<<<.(((>>>>>>><...<<<<<....<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>......>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<.....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>.....>>>>>>>>..>>>>><<<<<<....>>>>>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>......>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>>>>..... .....(((((((((.....(((..((((((((.(((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((...)))(...)..(((((.....))))).))...((((((.....(...[..)......))))).).........((.....))...(((((.....((.]...))....)))))...((((...((..(((((....))))....))).....((((((((......((((.....(((((((....({((((......)))))[[(...).(((....}]])))....)))))))......))))...)))))).)).)....(((((((........)))))))......(((((.[[[[[[)))))..)))......)..)))))).))...............((....))....))......(...(((.....))).............)).....)))))))))......(.((((((((((....((((((.(((....(....(((((....))))).....)...))).))))..)).)))))))))).<.(((........))).((((((..(.(((((((((((((..(((...((((.....))))...)))...((....))..(..((((...((((...))))...)))))((((((....))))))...)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....(((..((.((........)))).)))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))..((((((...(((.(((((((((...(((.....((..((......))..))...)).)...)))))))))))).......)))))).....((((((((((.....))))))))))....(((......)))...(((((((...((([[[...(.((((((.....((...........(((.((((((((((.....{.(((((.(((..(((.........)))..))).....(..(((......)))).)))))...)))))))))))))..........]]]))....))))))))))...)))))))(((((((.......)))))..))....))))))(.(.((((((((......((((((((....))))))))...)))))))).)..).....))))))((.....((.......((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.((...((((((.((.....))..)))))).....))...(((((........)))))]]((((((((.......(((...((((((((...(((((((((((((..{{)))))))(...(((((....(((((....(((.....))).....))))).....)))))....)(....)))))))...))))))))(...)....)))..)))))))).))).))).....((......)).))))..(((.......)))..))))...((((.....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((.....)))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}.(((.(((..(((((((..(((.....((((......)))).....))))))))..)))))((((........))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)))[[..(((((.....>]])))))..(((((((..(((.((......((((.((((((..(((((.((((((((..(((.(((.((.(........).)).))).)))...((((....)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((((((((.........))))))))).(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....).....))))..)))))).......((((.(.((((((...((.......))...))))))...)))).).......(((((.((((((..(((((((((......))))))..)))..(((.......)))......)))))..)...))).))....(((((((....))).))))....))..))).)))))))......((((((...((((..((((((((.....(....)....))))))))(((((...((((...((((((((((}}..)))))...)))))...)))).)))))..(((....((((.....}.......))))....))).)))).......)))))).....(((((((((.......)))))....(((.((((((((....(((((..(....)..)))))...)))).))))..)))...))))..... The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins; 23S Ribosomal RNA 4v9r AX 76 3.0 RF00005 URS000041AF00_562 24412368 0030533 0006412 562 gcgggguggagcagccugguagcucgucgggcucauaacccgaaggucgucgguucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome; P-site tRNA 4v9r BA 2731 3.0 RF02540,RF02541,RF00002 URS00001698E8_274 24412368 0003735 0005840 274 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuugugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<..>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(...((.(......).))...)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((..)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome; 23S Ribosomal RNA 4v9r DA 2714 3.0 RF02540,RF02541,RF00002 URS00001698E8_274 24412368 0003735 0005840 274 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<..>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(..(.(((......)))..).)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((.((((((..((.....)).))))))......))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((..))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((...(((((.........))))).....((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome; 23S Ribosomal RNA 4v9s BA 2731 3.1 RF02540,RF02541,RF00002 URS00001698E8_300852 24412368 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuugugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<..>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(...((..........))...)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((..)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of antibiotic GE82832 bound to 70S ribosome; 23S Ribosomal RNA 4v9s DA 2714 3.1 RF02540,RF02541,RF00002 URS00001698E8_300852 24412368 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<..>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(..(.(((......)))..).)..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((.((((((..((.....)).))))))......))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((..))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((...(((((.........))))).....((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of antibiotic GE82832 bound to 70S ribosome; 23S Ribosomal RNA 4w2f AX 76 2.4 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2f BA 2871 2.4 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<.<<<<.......>>>>..>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<......>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w2f CX 76 2.4 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2f DA 2800 2.4 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((....(.(..........)..)....))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w2g AX 76 2.55 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2g BA 2819 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<<......>>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<..<<....>>..>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w2g CX 76 2.55 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2g DA 2800 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<<......>>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(..(((.(......).)).).)..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w2h AX 76 2.7 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site; P-site tRNA 4w2h BA 2822 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgucgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<...>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<..<<....>>..>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site; 23S Ribosomal RNA 4w2h CX 76 2.7 RF00005 URS000041AF00_562 25306919 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site; P-site tRNA 4w2h DA 2800 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 25306919 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((......(((......))).......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((((...........))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site; 23S Ribosomal RNA 4w2i AX 76 2.7 RF00005 URS000041AF00_562 25306922 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2i BA 2822 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 25306922 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgucgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<<......>>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<...>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<...>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<..<......>..>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(..(.(((......)))...))..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.........)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((...)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((......((((............))))...)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w2i CX 76 2.7 RF00005 URS000041AF00_562 25306922 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites; E-site tRNA 4w2i DA 2800 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 25306922 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...((....(((.((((......(..........).......)))).)))...).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((((((((((((.(......[..(((((..(((......(((((.((....)).)))))...)))..........].)))))).)))))))))))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites; 23S Ribosomal RNA 4w92 C 96 3.209 RF00379 URS000080DDC9_1423 25271255 0180001 0010468 1423 gcgcgcuuaaucugcagagcgggggacccauugcacucaggggugaauccugguagggcgaaagcccgaauccgucagcuaaccucguaagcgcgc <<<<<<<...<<<..>>><<<<<<....<...........<<<.....<<.>>..<<<<....>>>>...>>>....>....>>>>>>.>>>>>>> (((((((...(((())))((((((....(..........(((((....((.))..((((....))))..))))..).)....)))))).))))))) Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO; C-di-AMP ribsoswitch 4wpo AA 2872 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 25594181 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguuggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.<.<<<<<<......>>>>.>>.>.>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<<..>>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((......(((......)).)......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{..((.(.(((..(((.........)))..))).....(...((......)).).).))....)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((......((((.(((....))).))))...)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state; 23S Ribosomal RNA 4wpo BX 76 2.8 RF00005 URS000041AF00_1403831 25594181 0030533 0006412 1403831 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state; P-site tRNA 4wqy AA 2852 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 25594181 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguuggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<........<<<<<<..................<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>.....>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>>....<<<..>>>......>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<.<<<<<<<...........<<<<<..<<<......<<<<<.<<<..>>>.>>>>>...>>>............>>>>>..>>>>>>>.>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(.(...((......))....))..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...(((......(.((((((.....(............(((((((.....{..((.(.(((..(((.........)))..))).....(...((......)).).).))....))))))))....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((..))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((.(((.(.........((.((..(((......((((...(....)...))))...)))............)).))).))).))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid); 23S Ribosomal RNA 4wqy BX 76 2.8 RF00005 URS000041AF00_1403831 25594181 0030533 0006412 1403831 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid); P-site tRNA 4x62 A 1512 3.4492 RF00177,RF01959,RF01960 URS000080DE21_300852 26751643 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>>.>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((.(((..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4x64 A 1512 3.35 RF00177,RF01959,RF01960 URS000080DE21_300852 26751643 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((.(((..(((((((....)))))))....(((....)))....)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(.....((.....))...)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4x65 A 1512 3.345 RF00177,RF01959,RF01960 URS000080DE21_300852 26751643 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>..>.>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))....(((....)))....)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4x66 A 1512 3.446 RF00177,RF01959,RF01960 URS000080DE21_300852 26751643 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))....(((....)))....)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S rRNA 4y1n B 259 3.0 RF02001 URS0000868528_221109 26502156 0000373 221109 uuaucccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguuccguggaaacauggaaucugaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaguugguacagaguaaaugaagcagauuugaagggaaagacugcauucuuacggggauc [[[.<<<<....<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<<<<<<<....>>>>>>>>>>...>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<...]]]..>>>>...>>>>.)))))))..>>>>>>>>..>>>...>>>>>>>>>>.>>>>>>...>>>>>>>>>>>...>>>>.... {{{{((((.{..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((((((((....))))))))))}..)))...)))...(((((((((((...........(((((.....[(((..((((((((((((..((((.]}}}}..))))...)))).]]]]]]]..))))))))..)))...)))))))))).))))))...)))))))))))...)))).... Oceanobacillus iheyensis group II intron domain 1 with iridium hexamine; group II intron, domain 1 4y1o A 258 2.95 RF02001 URS0000868528_221109 26502156 0000373 221109 uuaucccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguuccguggaaacauggaaucgaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaguugguacagaguaaaugaagcagauugaagggaaagacugcauucuuacccggggauc [[[.<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<...<<<<<<<<<....>>>>>>>>>...>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<...]]]..>>>>...>>>>.))))))).>>>>>>>>..>>>...>>>>>>>>>>>>>>>>...>>>>>>>>>>>....>>>>>.... {{{{((((({..((.((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((...(((((((((....)))))))))}..)))...)))...(((((.(((((.(.....)...(((((.....[((...((((((((((((..((((.]}}}}..))))...)))).]]]]]]].))))))))...))...)))))))))).)))))...)))))))).))....))))).... Oceanobacillus iheyensis group II intron domain 1; group II intron, domain 1 4y1o B 256 2.95 RF02001 URS0000868528_221109 26502156 0000373 221109 guuacccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggaaacauggaagaagcggacggcaaaccuucggucugaggaaacgaacuucauagaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaagggaaagacugcauucuuaccggggauc [[[[<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<.......<<<<<<....>>>>>>....>>>...>>>...<<<<<<<<<<<..........<<<<<.....<<<..<<<<<<<<<<<<..<<<<...]]]].>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>>>>>>>...>>>>>>>>>>>...>>>>>.... {{{{.(((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((.....(..(((((....)))))).}..)))...)))...(((((((((((.(....)...(((((.....(((..((((((((((((..((((...}}}}.))))...)))).]]]]]]]...))))))))..)))...))))))))))))))))...)))))))))))...))))..... Oceanobacillus iheyensis group II intron domain 1; group II intron, domain 1 4y4p 1A 2871 2.5 RF02540,RF02541,RF00002 URS00001698E8_300852 25775268 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((.(......).)..))...)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((..((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).))))))))..))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution; 23S Ribosomal RNA 4y4p 1x 76 2.5 RF00005 URS000041AF00_562 25775268 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution; P-site tRNA 4y4p 2A 2800 2.5 RF02540,RF02541,RF00002 URS00001698E8_300852 25775268 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...((((..(((...(((...(((.(((......((..........)).......))).)))..)).)...)))..))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((.......((((.((....)).))))....))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution; 23S Ribosomal RNA 4y4p 2x 76 2.5 RF00005 URS000041AF00_562 25775268 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution; P-site tRNA 4yaz R 84 2.0 RF01051 URS00008116B1_28231 25818298 0035438 28231 nguacacgacaauacuaaaccauccgcgaggauggggcggaaagccuaagggucucccugagacagccgggcugccgaaauauc <<<<..<<......<<...<<<<<<....>>>>>>...>>...<<<<..<<<<<<<...>>>>>..>>>>>>...>>...>>>> ((((..((......((...((((((....))))))..[))...((((..(((((((...))))).]))))))...))...)))) 3',3'-cGAMP riboswitch bound with 3',3'-cGAMP; RNA (84-MER) 4yb0 R 83 2.121 RF01051 URS00008116A8_28231 25818298 0035438 28231 guacacgacaauacuaaaccauccgcgaggauggggcggaaagccuaagggucucccugagacagccgggcugccgaaauauc <<<..<<......<<...<<<<<<....>>>>>>...>>...<<<<..<<<<<<<...>>>>>..>>>>>>...>>...>>>. (((..((......((...((((((....))))))..[))...((((..(((((((...))))).]))))))...))...))). 3',3'-cGAMP riboswitch bound with c-di-GMP; RNA (84-MER) 4z3s 1A 2871 2.65 RF02540,RF02541,RF00002 URS00001698E8_300852 26028538 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<.<<<.........>>>..>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<.<..>.>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution; 23S Ribosomal RNA 4z3s 1x 76 2.65 RF00005 URS000041AF00_562 26028538 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution; P-site tRNA 4z3s 2A 2800 2.65 RF02540,RF02541,RF00002 URS00001698E8_300852 26028538 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<<.....<<<<<<<<<..>>>>>>>>>..>>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.........................)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....)))))))).))..........]]].)....))))))))))...)))))))(((((.(()).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......(((((.((....)).)))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution; 23S Ribosomal RNA 4z3s 2x 76 2.65 RF00005 URS000041AF00_562 26028538 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution; P-site tRNA 4zer 2A 2869 3.1 RF02540,RF02541,RF00002 URS00001698E8_300852 25984971 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<.....<.......>......>>......................>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<.<<<<<...........<<<<<..<<<......<<.<<<<......>>>>>>....>>>............>>>>>..>>>>>.>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((.().))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((((((......)))).)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.......(((((.((....((.......)).....)).....(...(........).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((..((((.(......[..(((((..(((.......(.((((......))))).....)))..........].)))))).)))).).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome; 23s ribosomal RNA 5b2r A 81 2.0 RF02348 URS0000A76393_1314 26990991 1314 ggaaauuaggugcgcuuggcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of the Streptococcus pyogenes Cas9 VQR variant in complex with sgRNA and target DNA (TGA PAM); Guide RNA 5b2s A 81 2.2 RF02348 URS0000A76393_1314 26990991 1314 ggaaauuaggugcgcuuggcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of the Streptococcus pyogenes Cas9 EQR variant in complex with sgRNA and target DNA (TGAG PAM); Guide RNA 5b2t A 81 2.2 RF02348 URS0000A76393_1314 26990991 1314 ggaaauuaggugcgcuuggcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of the Streptococcus pyogenes Cas9 VRER variant in complex with sgRNA and target DNA (TGCG PAM); Guide RNA 5bjo E 36 2.35 URS0000BC4664_32630 28945234 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).((.....))...))))) Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U; RNA (36-MER) 5bjo Y 36 2.35 URS0000BC4664_32630 28945234 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).(.......)...))))) Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U; RNA (36-MER) 5bjp E 36 2.51 URS0000BC4664_32630 28945234 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).(.......)...))))) Crystal structure of the Corn RNA aptamer in complex with DFHO, iridium hexammine soak; RNA (36-MER) 5bjp Y 36 2.51 URS0000BC4664_32630 28945234 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).((.....))...))))) Crystal structure of the Corn RNA aptamer in complex with DFHO, iridium hexammine soak; RNA (36-MER) 5btp B 62 2.816 RF01750 URS0000868535_32630 26280533 0006730,1900371 32630 guuauaugacugacggaacguggaauuaaccacaugaaguauaaaugccgaccgucugggcg .<<<<<<..<.(((((...<<<<......>>>>..>..>>>>>>..<<<..)))))..>>>. .(.((((..(.[[[[[...((((......))))..)..)))).)..(((..]]]]]..))). Fusobacterium ulcerans ZTP riboswitch bound to ZMP; RNA (62-MER) 5c45 X 54 2.93 RF00050 URS000080DF4D_851 26416753 0010181 851 ggaucuucggggcagggugaaauucccgaccggugguauaguccacgaaagcuu ..............<<<.......>>>.....<<<<......>>>>........ ..............(((.......))).....((((......))))........ Selective Small Molecule Inhibition of the FMN Riboswitch; FMN Riboswitch 5c45 Y 56 2.93 RF00050 URS000080E20B_851 26416753 0010181 851 gcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauuc .......<<<<<.......>>>>>.....<<<......>>>............... .......(((((.......))))).....(((......)))............... Selective Small Molecule Inhibition of the FMN Riboswitch; FMN Riboswitch 5da6 A 32 1.05 URS00008FED44_5691 27050127 5691 agagaagaaagggaaauuuuuuuuuuuuuuuu ................................ ................................ Atomic resolution crystal structure of double-stranded RNA 32 base pairs long determined from random starting phases angles in the presence of pseudo translational symmetry using the direct methods program SIR2014.; RNA (32-MER) 5dar A 74 2.9 RF02540 URS0000A76356_2190 0003735 0005840 2190 gccuaagacagcggggagguuggcuuagaagcagccauccuuuaaagagugcguaacagcucacccgucgaggc <<<.......<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>...>>> (((.......(((((.(((..(((.........)))..))).....(...((......)).).)))))...))) CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII; 74 nt fragment of 23S rRNA 5dar D 74 2.9 RF02540 URS0000A76356_2190 0003735 0005840 2190 gccuaagacagcggggagguuggcuuagaagcagccauccuuuaaagagugcguaacagcucacccgucgaggc .<<.......<<<<<.<<<..<<<<.......>>>>..>>>.........<<......>>...>>>>>...>>. .((.......(((((.(((..(((.........)))..))).....(...((......)).).)))))...)). CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII; 74 nt fragment of 23S rRNA 5ddr A 61 2.605 RF01739 URS00008FED3F_32046 26655897 0070406 32046 cguugacccaggaaacugggcggaaguaagguccauugcacuccgggccugaagcaacgcg <<<<<.<<<<<....>>>>>........<<<<<<..........>>>>>>....>>>>>.. (((((.(((((....)))))..[.....((((((..........))))))....)))))]. L-glutamine riboswitch bound with L-glutamine soaked with Cs+; L-glutamine riboswitch RNA (61-MER) 5ddr B 61 2.605 RF01739 URS00008FED3F_32046 26655897 0070406 32046 cguugacccaggaaacugggcggaaguaagguccauugcacuccgggccugaagcaacgcg <<<<<.<<<<<....>>>>>........<<<<<<..........>>>>>>....>>>>>.. (((((.(((((....)))))..[.....((((((..........))))))....)))))]. L-glutamine riboswitch bound with L-glutamine soaked with Cs+; L-glutamine riboswitch RNA (61-MER) 5de5 A 35 3.0011 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<.<<....................>>>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA.; sc1 5de5 C 35 3.0011 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<.<<....................>>>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA.; sc1 5de8 A 35 3.1003 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<.<<....................>>>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA, iridium hexammine bound form.; sc1 5de8 C 35 3.1003 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<..<....................>.>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA, iridium hexammine bound form.; sc1 5dea A 35 2.7973 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<.<<....................>>>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA, cesium bound form.; sc1 5dea C 35 2.7973 URS0000868538_32630 26374839 32630 gcugcgguguggaaggaguggcuggguugcgcagc <<<<<.<<....................>>>>>>> (((((.((....................))))))) Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA, cesium bound form.; sc1 5doy 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 26028538 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<<......>>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<.....(.>>>....>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<.<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((.(......).))..)...))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((..(((......(((((.((....)).)))))...)))..........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution; 23S Ribosomal RNA 5doy 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 26028538 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu 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(((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((...))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((((((.....(.(..........)..).....)))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((..))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((.......((((.((....)).))))....)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((((...........))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution; 23S Ribosomal RNA 5doy 2x 76 2.6 RF00005 URS000041AF00_562 26028538 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution; P-site tRNA 5dqk A 48 2.707 RF00008 URS0000868531_32630 26398724 3.1.-.- 0004540 32630 ggguacuuaagcccacugaugagucgcugggaugcgacgaaacgccca ......................<<<<<......>>>>>.......... ...............(....).(((((......))))).......... Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+; RNA (48-MER) 5dqk B 20 2.707 URS000086855A_32630 26398724 32630 gggcgucugggcaguaccca .................... .................... Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+; RNA (5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)-R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3') 5dun A 54 2.64 URS00008FED1D_32630 26473980 32630 uuuunaaugaagccacaggcugugaggguccuaagccccuaauucagaagggaa .<<....<<<<[[<<<<<.>>>>>.<<<.(((..]]>>>...>>>>..))).>> .((....(((({{(((((.))))).(((.[[[..}})))...))))..]]].)) The crystal structure of OMe substituted twister ribozyme; RNA (54-MER) 5ew4 A 20 1.47 URS00008FED27_9606 26878348 9606 cccggccccggccccggccc .................... .................... Crystal structure of C9ORF72 Antisense CCCCGG repeat RNA associated with Lou Gehrig's disease and frontotemporal dementia, crystallized with Sr2+; RNA (5'-R(*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*C)-3') 5ew4 B 21 1.47 URS00008FED27_9606 26878348 9606 ccccggccccggccccggccc ..................... ..................... Crystal structure of C9ORF72 Antisense CCCCGG repeat RNA associated with Lou Gehrig's disease and frontotemporal dementia, crystallized with Sr2+; RNA (5'-R(*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*C)-3') 5ew7 A 20 1.75 URS00008FED27_9606 26878348 9606 cccggccccggccccggccc .................... .................... Crystal structure of C9ORF72 Antisense CCCCGG repeat RNA associated with Lou Gehrig's disease and frontotemporal dementia, crystallized with Ba2+; RNA (5'-R(*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*C)-3') 5ew7 B 21 1.75 URS00008FED27_9606 26878348 9606 ccccggccccggccccggccc ..................... ..................... Crystal structure of C9ORF72 Antisense CCCCGG repeat RNA associated with Lou Gehrig's disease and frontotemporal dementia, crystallized with Ba2+; RNA (5'-R(*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*GP*GP*CP*CP*CP*C)-3') 5f8k 1A 2872 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 26792896 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguuggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<....<<<.......>>>....>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<.<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>.>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((((((......)))).)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome; 23S ribosomal RNA 5f8k 1x 76 2.8 RF00005 URS00002905B5_83333 26792896 0030533 0006412 83333 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome; tRNAiMet 5f8k 2A 2867 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 26792896 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.......>>>...>>>......................>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<.<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((((((......)))).)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.......(((((.((...(((.......)))....)).....(...(........).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((..((((.(......[..((((...(((.......(.((.((....)).))).....)))..........]..))))).)))).).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome; 23S ribosomal RNA 5f8k 2x 76 2.8 RF00005 URS00002905B5_83333 26792896 0030533 0006412 83333 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome; tRNAiMet 5fjc A 94 1.71 RF00162 URS0000A7634F_119072 27016741 0010468 119072 ngcuuaucaagagagggggagugacuggcgcgaagaaccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<....((.>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bU; SAM-I RIBOSWITCH 5fk3 A 94 2.5 RF00162 URS0000A76386_119072 27016741 0010468 119072 ggcuuaucaagagagggcgagcgacuggcgcgaagacccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CC; SAM-I RIBOSWITCH 5fk5 A 94 3.315 RF00162 URS0000A76359_119072 27016741 0010468 119072 ggcuuaucaagagagggagagcgacuggcgcgaagaaccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is AA; SAM-I RIBOSWITCH 5fk6 A 94 2.5 RF00162 URS0000A7635A_119072 27016741 0010468 119072 ggcuuaucaagagagggagagcgacuggcgcgaagacccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagcca <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CA; SAM-I RIBOSWITCH 5fkd A 94 3.0 RF00162 URS0000A7635B_119072 27016741 0010468 119072 ggcuuaucaagagagggagagcgacuggcgcgaagauccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<<..<<<...((>>>.....>>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UA; SAM-I RIBOSWITCH 5fke A 94 2.8 RF00162 URS0000A7638A_119072 27016741 0010468 119072 ggcuuaucaagagagggugagcgacuggcgcgaagagccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<<..<<<...((>>>.....>>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.((((..(((.[.[[))).....)))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GU; SAM-I RIBOSWITCH 5fkf A 94 2.8 RF00162 URS0000A76399_119072 27016741 0010468 119072 ggcuuaucaagagagggcgagcgacuggcgcgaagauccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((......(((...(((.[.[[)))......))).(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UC; SAM-I RIBOSWITCH 5fkg A 94 2.95 RF00162 URS0000A76343_119072 27016741 0010468 119072 ggcuuaucaagagagggggagugacuggcgcgaagacccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<<..<<....((.>>.....>>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CG; SAM-I RIBOSWITCH 5fkh A 94 2.65 RF00162 URS0000A76344_119072 27016741 0010468 119072 ggcuuaucaagagagggugagcgacuggcgcgaagacccccggcaaccagaaauggugccaauuccugcagcggaaacguugaaagaugagccg <<<<<<<<......<<<...<<<...((>>>......>>>.<<<<.<<<....>>>>>>>....))..<<<<<....>>>>>...>>>>>>>>. ((((((((....(.(((...(((.[.[[)))......))))(((..(((....))).)))...(]].](((((....)))))..))))))))). SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CU; SAM-I RIBOSWITCH 5fq5 A 83 2.136 RF02348 URS0000A76358_32630 26960129 32630 gauaacucaauuuguaaaaaaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .....................((((((..((((....))))....))))))..(((..).)).......((((....)))).. Crystal structure of Cas9-sgRNA-DNA complex solved by native SAD phasing; SGRNA 5fw1 A 81 2.499 RF02348 URS000080E358_32630 26990992 32630 auaacucaauuuguaaaaaaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA; SGRNA 5fw2 A 81 2.676 RF02348 URS000080E358_32630 26990992 32630 auaacucaauuuguaaaaaaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of SpCas9 variant EQR bound to sgRNA and TGAG PAM target DNA; SGRNA 5fw3 A 81 2.7 RF02348 URS000080E358_32630 26990992 32630 auaacucaauuuguaaaaaaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA; SGRNA 5j4b 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 27079977 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<......>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...((..........)..).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......(((((..........)))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S ribosomal RNA 5j4b 1x 76 2.6 RF00005 URS000041AF00_562 27079977 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 5j4b 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 27079977 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.(((.....(((..........)).).....))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((.......((((.((....)).))))....))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S ribosomal RNA 5j4b 2x 76 2.6 RF00005 URS000041AF00_562 27079977 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(.(((..]....))).)))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 5j4c 1A 2871 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 27079977 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<......>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...((..........)..).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((..(((......(((((..........)))))...)))..........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution; 23S ribosomal RNA 5j4c 1x 76 2.8 RF00005 URS000041AF00_562 27079977 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution; P-site tRNA 5j4c 2A 2800 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 27079977 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu 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(((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.(((.....(((..........)).).....))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((.......((((.((....)).))))....)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution; 23S ribosomal RNA 5j4c 2x 76 2.8 RF00005 URS000041AF00_562 27079977 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution; P-site tRNA 5kx9 X 53 2.9 RF00050 URS000080DF4D_851 27485612,26416753 0010181 851 ggaucuucggggcagggugaaauucccgaccggugguauaguccacgaaagcu ..............<<<.......>>>.....<<<<......>>>>....... ..............(((.......))).....((((......))))....... Selective Small Molecule Inhibition of the FMN Riboswitch; FMN Riboswitch 5kx9 Y 56 2.9 RF00050 URS000080E20B_851 27485612,26416753 0010181 851 gcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauuc .......<<<<<.......>>>>>.....<<<......>>>............... .......(((((.......))))).....(((......)))............... Selective Small Molecule Inhibition of the FMN Riboswitch; FMN Riboswitch 5m73 A 145 3.4 RF00017,RF01856 URS0000A7784F_9606 27899666 0006617 0005786 9606 ngguguccgcacuaaguucggcaucaauauggugaccucccgggagcgggggaccaccagguugccuaaggaggggugaaccggcccaggucggaaacggagcaggucaaaacucccgugcugaucaguagugggaucgcgccua <<<<<<<<.<<<<<...<<<<<<<<<<<.<<<<<..<<<<<<....>>>>>>..>>>>>.>>>>........<<<<<.....<<<<....<<<....>>>....>>>>...>>>>>.>>>>>>>....>>>>>>>...>>>>>>. ((((((((.(((((.(.(((((((((((.(((((..((((((....))))))..))))).))))......(.((((......((((....(((....)))....))))....)))))))))))).)..)))))))...)))))). Structure of the human SRP S domain with SRP72 RNA-binding domain; Human gene for small cytoplasmic 7SL RNA (7L30.1) 5m73 E 145 3.4 RF00017,RF01856 URS0000A7784F_9606 27899666 0006617 0005786 9606 ngguguccgcacuaaguucggcaucaauauggugaccucccgggagcgggggaccaccagguugccuaaggaggggugaaccggcccaggucggaaacggagcaggucaaaacucccgugcugaucaguagugggaucgcgccua <<<<<<<<.<<<<<...<<<<<<.<<<<.<<<<<..<<<<<<....>>>>>>..>>>>>.>>>>........<<<<<.....<<<<....<<<....>>>....>>>>...>>>>>..>>>>>>....>>>>>>>...>>>>>>. .(((((((.((((..(.((((((.((((.(((((..((((((....))))))..))))).))))......(.((((......((((.....((....)).....))))....))))).)))))).)...))))))...))))).. Structure of the human SRP S domain with SRP72 RNA-binding domain; Human gene for small cytoplasmic 7SL RNA (7L30.1) 5mps 6 99 3.85 RF00026 URS00006184A9_4932 28076345,26292705,26106855,26829225,27459055 0030621 0000244,0000353 0005688,0046540 4932 guucgcgaagcuucguggacauuuggucaauuugaaacaauacagagaugaucagcaguuccccugcauaaggaugaaccguuuuacaaagagauuuau <<<<<<<<<..>>>>>>>>>.....................................<<<..<<<.....>>>...>>>.................... (((((((((()))))))))).....................................(((.((((.....)))..)))).................... Structure of a spliceosome remodeled for exon ligation; Saccharomyces cerevisiae strain T.52_2H chromosome XII sequence 5mq0 6 99 4.17 RF00026 URS00006184A9_4932 28076345,26292705,26106855,26829225,27459055 0030621 0000244,0000353 0005688,0046540 4932 guucgcgaagcuucguggacauuuggucaauuugaaacaauacagagaugaucagcaguuccccugcauaaggaugaaccguuuuacaaagagauuuau <<<<<<<<<..>>>>>>>>>.....................................<<<..<<<.....>>>...>>>.................... (((((((((()))))))))).....................................(((.((((.....)))..)))).................... Structure of a spliceosome remodeled for exon ligation; Saccharomyces cerevisiae strain T.52_2H chromosome XII sequence 5nwq A 41 1.91 RF01763 URS0000CBFF2B_2021 28988949 0010468 2021 ccggacgaggugcgccguacccggucaggacaagacggngc ((((.......<<<<<<<..))))..........>>>>>>> [[[[.......(((((((.(]]]]....).....))))))) The structure of the thermobifida fusca guanidine III riboswitch with guanidine.; Guanidine III riboswitch 5ob3 A 69 2.004 URS0000BC468E_32630 28939697 32630 gggaguacggugagggucggguccaguagguacgccuacuguugaguagagugugggcuccguacuccc <<<<<<<<<<.<.........<<<<<<<<<....>>>>>>>..>>............>.>>>>>>>>>> ((((((((((.(.....(...(((((((((....)))))))..)).........)..).)))))))))) iSpinach aptamer; RNA aptamer (69-MER) 5t62 A 3204 3.3 RF02540,RF02543 URS000061F377_559292 28179369 0003735 0005840 559292 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........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........(.(((..(((((.((((...((((((((....{((((......)))).[[(...).(((....}]])))....)))))))).....).)).)...))))).))).)...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.(((((......(((((((((((((((((((((((.......(..((((......(((..........))).......))))..).....))))).))))))))))........(((....)))....)))))))).....))))).))))).<((((........))))((((((..(.((((((.((((((..(((..((((.......))))..)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)<)))...(((..((.((........)))).)))....))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((((((((((...(((.(((((((.....(((....(((..(.(((....((((((.....))))))..))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))).)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{..((((...(...((.........))...)...........(........)...))))....)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....)))........(((.(((.....).)).)))....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((..{{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)(((((((......))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((.(...)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(.(.............).)........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..((((((.((((((...........[...((......(...)...........]...))......))).))).))))))....((((.....((.(..(((..........)))..........]]...(((((......)))))..).))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((..((((....{..))))..))).(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))....))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}}.)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..)..)))))..)))))...)))....)))).)))))).))))).. Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex; TPA_inf: Saccharomyces cerevisiae S288C chromosome XII, complete sequence 5t6r A 3204 4.2 RF02540,RF02543 URS000061F377_4932 28179369 0003735 0005840 4932 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.........................<<<<<.....<......>......>>>>>...........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[..<<.......<<.<<<<<<...>>>>>>.>>.......>>....<<<<<<.<<<<<..<<<...<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>.....>.>>.....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<......<<<<<<<<<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<..<....>..>>>.......>>>>>>.>>.>.>>>>>.>>>>>>>>>>........<<<....>>>....>>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<..<<<<<.....>>>>>..>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<...<<<<<<.....>>>>>>.>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<....<<.........>>....>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<<<<...>>.>>>>>>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<<<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<......>>>>>>>>>>>.>.>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<...............<<<<<.....<..>......>>>>><<.<<<<<<<<<<......>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>.<.<<..<<<..<<<<<<.<..<<<....<<<<<....>>>>.>...>>>>>>>>..>>>>><<<<<<......>.>>>>>........<...........<<<<<.......>>>>>.....>.....>>.>..>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<...<<<<<<<...........<<<<<....<..>..............>>>>>..>>>>>>.>...>>>>>>...<<<<<.....<<<<..<<<<<......>>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<......>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((.(((.(((((..(((...((((((((....{((((......)))).[[(...).(((....}]])))....)))))))).....).)).....)))))))).))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.(((((......(((((((((((((((((((((((.......(..((((......(((..........))).......))))..).....))))).))))))))))........(((....)))....)))))))).....))))).))))).<((((........))))((((((..(.((((((.((((((..(((..((((.......))))..)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)<)))...(((..((.((........)))).)))....))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((((((((((...(((.(((((((.....(((....(((..(.(((....((((((.....))))))..))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))).)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((...(...((.........))...)...........(........)...)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....)))........(((.(((.....).)).)))....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((..{{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)(((((((......))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((.(...)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))((((...........))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((.((..(((((...........(.........(.(...))..........)...........))).))..)).)))....((((.....((((..(((..........)))..........]]...(((((......)))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((..((((....{..))))..))).(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))....))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}}.)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..)..)))))..)))))...)))....)))).)))))).))))).. Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex; 25S Ribosomal RNA 5tf6 B 71 2.3 RF00026 URS0000B21DFD_4932 28045380 0030621 0000244,0000353 0005688,0046540 4932 ggucaauuugaaacaauacagagaugaucagcaguuccccugcauaaggaugaaccguuuuacaaagagac .<<<..<<<<...................<<<.<<<<.<<<.....>>>..>>>>.>>>...>>>>..>>> .(((..((((...................(((.((((.(((.....)))..)))).)))...))))..))) Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core; U6 snRNA 5tf6 D 52 2.3 RF00026 URS0000B21DFD_4932 28045380 0030621 0000244,0000353 0005688,0046540 4932 ggucaauuugaaacaauacagagaugaucagcagccguuuuacaaagagacc <<.<..<<<<...................<<<....>>>...>>>>..>.>> ((((..((((...................(((....)))...))))..)))) Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core; U6 snRNA 5v3f A 31 1.7 URS0000BC4667_32630 28553947 32630 gugcgaagggacggugcggagaggagagcac <<<<.......................>>>> ((((.......................)))) Co-crystal structure of the fluorogenic RNA Mango; RNA (31-MER) 5v3f B 19 1.7 URS0000BC4667_32630 28553947 32630 gggacggugcggagaggag ................... ................... Co-crystal structure of the fluorogenic RNA Mango; RNA (31-MER) 5vj9 D 16 1.57 URS0000BC467C_287 28600356 287 gcggggacgacccugc <<<<<<....>>>>>> ((((((....)))))) Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa; RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*UP*GP*C)-3') 5vp2 2A 2800 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 28505372 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.(((......((..........)).......))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.((...{{....))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((.......((((.((....)).))))....)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution; 23S Ribosomal RNA 5w4k 2A 2800 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 28846667 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((.......((((.((....)).))))....))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; 23S Ribosomal RNA 5w4k 2x 76 2.7 RF00005 URS000041AF00_562 28846667 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; P-site tRNA 5wdt A 2900 3.0 RF02540,RF02541 URS00021ED92F_562 29733411 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggaggagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcaugcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaacucaucuccggggguagagcacuguuucggcaagggggucacgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugugaagguguacugugagguaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggcgacuugcucguggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccgggagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacuccuugagaguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu .<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((....<<...............<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>............>>..........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<<..>>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<......<<...<<<.<<<<...<<<<<<<..>>>>>.>>...>>>>.>>>..>>.......>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<...<........<<<<<.......<<.........>>..............<<<......>>>..>>>>>....>...>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>>.<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>....<<<<......>>>>....>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<........<<<<<<.<<....>>..>>>>>>........>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<............<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>...>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>.. .(((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((.(((...(((]]]..].))).......))).))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.(...................(((.(((...(((((......)))))[[......(((.....]])))...)))...)))................)...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..(((((((..)))))))..)))).[.(.(........).).((((((....(((((((((((((..((....((.....))....))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(..(..(..)..)...)...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((...(........(((((.(.......................).....(..(((......)))).)))))....)...))))).))...........]]].)...))))))))))...)))))))((((.(..........).))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..(((....((((..((((((.((.....))))))))....))))....)))...))(..(((........)))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....((....(((.......)))....))...))))))(...).......(((((.(((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((.........((((...(....)....)))).........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).).))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((.(..(((..(....(..........(..(............(((.((......)).)))...................)..).)....)..)))..).)))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((...(((((.........))))).....((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..((.((((.....(....)....)))).)).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((.....((((....))))....))...))))).))).....))..).)))))))).. 70S ribosome-EF-Tu H84A complex with GppNHp; 23S rRNA 5we6 A 2900 3.4 RF02540,RF02541 URS00021ED92F_562 29733411 0003735 0005840 562 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70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA; 23S rRNA 5wf0 A 2900 3.6 RF02540,RF02541 URS00021ED92F_562 29733411 0003735 0005840 562 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70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2); 23S rRNA 5wf0 a 1540 3.6 RF00177,RF01959,RF01960 URS0000D56C37_562 29733411 0003735 0005840 562 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70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2); 16S rRNA 5wfs A 2900 3.0 RF02540,RF02541 URS00021ED92F_562 29733411 0003735 0005840 562 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70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4); 23S rRNA 5wfs a 1540 3.0 RF00177,RF01959,RF01960 URS0000D56C37_562 29733411 0003735 0005840 562 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70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4); 16S rRNA 5wis 1A 2871 2.703 RF02540,RF02541,RF00002 URS00001698E8_300852 28934499 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<<..>>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; 23S ribosomal RNA 5wis 1x 76 2.703 RF00005 URS000041AF00_562 28934499 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; P-site tRNA 5wis 2A 2800 2.703 RF02540,RF02541,RF00002 URS00001698E8_300852 28934499 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((..(((.....((..........))......)))..)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((...((......(((((.((....)).)))))...)).............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; 23S ribosomal RNA 5wis 2x 76 2.703 RF00005 URS000041AF00_562 28934499 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution; P-site tRNA 5wit 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 28934499 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<.<<<<.......>>>>..>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.((((((.((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)))).)))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((((......))))..)...))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S Ribosomal RNA 5wit 1x 76 2.6 RF00005 URS000041AF00_562 28934499 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 5wit 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 28934499 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((....(...............)....)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((......(((((.((....)).)))))...))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S Ribosomal RNA 5wit 2x 76 2.6 RF00005 URS000041AF00_562 28934499 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 5wnp A 1512 3.3 RF00177,RF01959,RF01960 URS000080DE21_300852 29459784 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))....(((....)))....)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S Ribosomal RNA rRNA 5wnt A 1512 3.3 RF00177,RF01959,RF01960 URS000080DE21_300852 29459784 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))....(((....)))....)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S Ribosomal RNA rRNA 5wnu A 1512 3.4 RF00177,RF01959,RF01960 URS000080DE21_300852 29459784 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......(((.((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..)))))).)))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))...((((....)))..).)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S Ribosomal RNA rRNA 5wnv A 1512 3.3 RF00177,RF01959,RF01960 URS000080DE21_300852 29459784 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.<..<<<<<<<....>>>>>>>...<<<<....>>>>...>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<<..>>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((..((..(((((((....)))))))....(((....)))....)).))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Crystal Structure of 30S ribosomal subunit from Thermus thermophilus; 16S Ribosomal RNA rRNA 6ai6 B 81 2.7 RF02348 URS0000A76393_1314 30166441 1314 ggaaauuaggugcgcuuggcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Crystal structure of SpCas9-NG; RNA (81-MER) 6aso I 70 2.71 RF00026 URS0000D56C4E_4932 29717126 0030621 0000244,0000353 0005688,0046540 4932 caauuugaaacaauacagagaugaucagcgguuccccugcauaaggggaaccguuuuacaaagaguuuun ...<<<<...................<<<<<<<<<<<<.....>>>>>>>>>>>>...>>>>........ (..((((...................((((((((((((.....))))))))))))...))))..)..... Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNA; Saccharomyces cerevisiae strain HB_S_GIMBLETTROAD_9 chromosome XII sequence 6c63 A 36 2.90003 URS0000D77919_32630 29768001 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin; RNA (36-MER) 6c63 B 36 2.90003 URS0000D77919_32630 29768001 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin; RNA (36-MER) 6c63 C 32 2.90003 URS0000D7792F_32630 29768001 32630 guacgaaggagaggagaggaagaggagaguac <<<<........................>>>> ..((........................)).. Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin; RNA (32-MER) 6c64 A 36 3.00015 URS0000D77919_32630 29768001 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin; RNA (36-MER) 6c64 B 36 3.00015 URS0000D77919_32630 29768001 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin; RNA (36-MER) 6c64 D 32 3.00015 URS0000D7792F_32630 29768001 32630 guacgaaggagaggagaggaagaggagaguac .<<<........................>>>. ..((........................)).. Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin; RNA (32-MER) 6c65 A 36 2.80005 URS0000D7790A_32630 29768001 32630 gcguacgaaggagaggagagguagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin; RNA (36-MER) 6c65 B 36 2.80005 URS0000D7790A_32630 29768001 32630 gcguacgaaggagaggagagguagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin; RNA (36-MER) 6c65 C 35 2.80005 URS0000D778FE_32630 29768001 32630 cguacgaaggagaggagagguagaggagaguacgg .<<<<........................>>>>.. ..(((........................)))... Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin; RNA (35-MER) 6cae 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 29625040 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<...........>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..((..(......)....)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S Ribosomal RNA 6cae 1x 76 2.6 RF00005 URS000041AF00_562 29625040 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 6cae 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 29625040 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.(..(...............).)..)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((......(((((.((....)).)))))...)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; 23S Ribosomal RNA 6cae 2x 76 2.6 RF00005 URS000041AF00_562 29625040 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(.(((..]....))).)))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution; P-site tRNA 6cao A 1512 3.45 RF00177,RF01959,RF01960 URS000080E226_300852 30139800 0003735 0005840 300852 uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggauccuuucu ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.......>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>>.....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.(..(((((((....)))))))...((((....)))..).)))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(....(((.....)))..)...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((.((((((...(.((((....(((....))).)))).)..)))))).))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... Structure of the ribosomal decoding complex at ambient temperature; 16S Ribosomal RNA rRNA 6cfj 1A 2871 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(...((..........)..).)..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(......[..(((((..(((......((((.(((....))).))))...)))..........].)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution; 23S Ribosomal RNA 6cfj 1x 76 2.8 RF00005 URS000041AF00_550538 29410130 0030533 0006412 550538 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution; P-site tRNA 6cfj 2A 2800 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<<.....<<<<<<<<....>>>>>>>>..>>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(....(..........)....)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....)))))))).))..........]]].)....))))))))))...)))))))(((((.(..).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))(.((...(((((((.(.(((((.........)))))...).((.[.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution; 23S Ribosomal RNA 6cfj 2x 76 2.8 RF00005 URS000041AF00_550538 29410130 0030533 0006412 550538 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution; P-site tRNA 6cfk 1A 2872 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguuggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<...................>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<......>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((((((......)))).)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((...................))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((..))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution; 23S Ribosomal RNA 6cfk 2A 2867 2.7 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..................>>>......................>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((...((.(((......)))..))...)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((........((((.((....(.(......)).....)).........(........)...))))....)))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..((((..((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....).))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution; 23S Ribosomal RNA 6cfl 1A 2872 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguuggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<....<<.........>>....>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<......>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((((((......)))).)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(......[..(((((..(((......(((((.((....)).)))))...)))..........].)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution; 23S Ribosomal RNA 6cfl 2A 2867 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 29410130 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<<......>>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>......................>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.........<<<<<......>>>>>......>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(.((.(((......)))..)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((........((((.((....((.......)).....)).........((......))...))))....)))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..((((..((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....).))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((((.((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).)))))).)))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(..(.).......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution; 23S Ribosomal RNA 6ck4 A 101 3.097 RF00442 URS0000D7794B_583357 29877798 0010468 583357 ugaaaguguaccuaggguuccagccuauguagguguucggaccgagcgguacagguaauaccacaccuuagggacaaaagcccgagaggauagguuucacu <<<<<.<<<<<<..<<..<<<.<<<<<..>>>>>....>>>>>....>>>>>><<<<.>>>>...<<<<.<<<.......>>>..>>>>.....>>>>>.. (((((.((((((..((...((((((((..)))))..).)).))....))))))((((.))))...((((.(((.......)))..)))).....))))).. G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp; PRPP riboswitch 6ck4 B 108 3.097 RF00442 URS0000D7794B_583357 29877798 0010468 583357 gugaaaguguaccuaggguuccagccuauuuguagguguucggaccgagcgguacagguauauuauauaccacaccuuagggacaaaagcccgagaggaugguuucac <<<<<<.<<<<<<..<<..<<<.<<<<<....>>>>>....>>>>>....>>>>>><<<<<<<.>>>>>>>...<<<<.<<<.......>>>..>>>>....>>>>>> ((((((.((((((..((...((((((((....)))))..).)).))....))))))(((((((.)))))))...((((.(((.......)))..))))....)))))) G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp; PRPP riboswitch 6ck4 C 108 3.097 RF00442 URS0000D7794B_583357 29877798 0010468 583357 gugaaaguguaccuaggguuccagccuauuuguagguguucggaccgagcgguacagguauauuauauaccacaccuuagggacaaaagcccagaggauagguuucac <<<<<<.<<<<<<..<<..<<<.<<<<<<..>>>>>>....>>>>>....>>>>>><<<<<<<.>>>>>>>...<<<<.<<<.......>>>.>>>>.....>>>>>> ((((((.((((((..((...(((((((((..))))))..).)).))....))))))(((((((.)))))))...((((.(((.......))).)))).....)))))) G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp; PRPP riboswitch 6ck4 D 101 3.097 RF00442 URS0000D7794B_583357 29877798 0010468 583357 gugaaaguguaccuaggguuccagccuauguagguguucggaccgagcgguacagguaauauaccacaccuuagggacaaaagcccagaggaguuucacgu .<<<<<.<<<<<<..<<..<<<.<<<<<..>>>>>....>>>>>....>>>>>><<<.....>>>...<<<<.<<<.......>>>.>>>>..>>>>>... .((((..((((((..((...((((((((..)))))..).)).))....))))))(((.....)))...((((.(((.......))).))))...))))... G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp; PRPP riboswitch 6ck5 A 108 2.49 RF00442 URS0000D7791C_583357 29877798 0010468 583357 gugaaaguguaccuaggguuccagccuauuuguagguguucggaccgagcgguacagguauauuauauaccacaccuuagggacaaaagcccgggaggauagguuuca .<<<<<.<<<<<<..<<..<<<.<<<<<....>>>>>....>>>>>....>>>>>><<<<<<<.>>>>>>>...<<<<.<<<.......>>>..>>>>.....>>>>> .(((((.((((((..((...((((((((....)))))..).)).))....))))))((((((...)))))).[.((((.(((.......))).])))).....))))) PRPP riboswitch from T. mathranii bound to PRPP; PRPP riboswitch 6ck5 B 100 2.49 RF00442 URS0000D7791C_583357 29877798 0010468 583357 gugaaaguguaccuaggguuccagccuauguagguguucggaccgagcgguacagguauaccacaccuuagggacaaaagcccgggaggauagguuucac .<<<<<.<<<<<<..<<..<<<.<<<<<..>>>>>....>>>>>....>>>>>><<....>>...<<<<.<<<.......>>>..>>>>.....>>>>>. ((((((.((((((..((...((((((((..)))))..).)).))....))))))((....)).[.((((.(((.......))).])))).....)))))) PRPP riboswitch from T. mathranii bound to PRPP; PRPP riboswitch 6dlq A 107 2.8 RF00442 URS0000E60BB3_643648 30120360 0010468 643648 ngaaagugugucuaggguuccgcgugcuucggcacggacugguccaagugacacagacgcauucgugcguuacaccggagggauagaagcccaggcggguagguuun .<<<<.<<<<<<..<<...<<<<<<<<....>>>>>...>>>.>>....>>>>>><<<<<<....>>>>>>...<<<..<<<.......>>>...>>>.....>>>> .((((.((((((..((...((((((((....)))))..).)).))....))))))((((((....)))))).[.(((..(((.......))).].))).....)))) PRPP Riboswitch bound to PRPP, manganese chloride soaked structure; PRPP Riboswitch 6dlr A 107 2.656 RF00442 URS0000E60BB3_643648 30120360 0010468 643648 ggaaagugugucuaggguuccgcgugcuucggcacggacugguccaagugacacagacgcauucgugcguuacaccggagggauagaagcccaggcggguagguuun .<<<<.<<<<<<..<<...<<<<<<<<....>>>>>...>>>.>>....>>>>>><<<<<<....>>>>>>...<<<..<<<.......>>>...>>>.....>>>> .((((.((((((..((...((((((((....)))))..).)).))....))))))((((((....)))))).[.(((..(((.......))).].))).....)))) PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure; PRPP Riboswitch 6dmc A 102 2.2 URS0000E60BA7_679936 30120360 679936 ngaaguguaccuagggauccaccucgagagaggaaggaccaagcgguacaggccuacuucgguagguuacaccguggggauaaaagacccguggcaaguuun <<<<.<<<<<<..<<..<<<.<<<<....>>>>..>>>>>....>>>>>><<<<<<<....>>>>>>>...<<<<<<<.........>>>>>>>....>>>> ((((.((((((..((...((.((((....))))..)).))....))))))(((((((....)))))))...(((((((.........)))))))....)))) ppGpp Riboswitch bound to ppGpp, native structure; ppGpp Riboswitch 6dmd A 102 2.65 URS0000E60BA7_679936 30120360 679936 ngaaguguaccuagggauccaccucgagagaggaaggaccaagcgguacaggccuacuucgguagguuacaccguggggauaaaagacccguggcaaguuun <<<<.<<<<<<..<<..<<<.<<<<....>>>>..>>>>>....>>>>>><<<<<<<....>>>>>>>...<<<<<<<.........>>>>>>>....>>>> ((((.((((((..((...((.((((....))))..)).))....))))))(((((((....)))))))...(((((((.........)))))))....)))) ppGpp Riboswitch bound to ppGpp, manganese chloride structure; ppGpp Riboswitch 6dn1 Z 57 3.03 RF00050 URS000080E334_851 30107111 0010181 851 ggauugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauucg .......<<<<<.......>>>>>.....<<<......>>>................ .......(((((.......))))).....(((......)))................ CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA; RNA (57-MER) 6dn2 Y 56 2.88 RF00050 URS000080E20B_851 30107111 0010181 851 gcuuugauuuggugaaauuccaaaaccgacaguagagucuggaugagagaagauuc .......<<<<<.......>>>>>.....<<<......>>>............... .......(((((.......))))).....(((......)))............... CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA; RNA (56-MER) 6e80 A 35 2.901 URS0000BC4664_32630 31178406 32630 gcgcgaggaaggaggucugaggaggucacugcgcc <<<<..........................>>>>. ((((...(........).((.....))...)))). Crystal structure of the Corn aptamer in unliganded state; RNA (36-MER) 6e81 A 36 2.721 URS0000BC4664_32630 31178406 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).(.......)...))))) Crystal structure of the Corn aptamer in complex with ThT; RNA (36-MER) 6e82 A 36 3.101 URS0000EEAD12_32630 31178406 32630 ggcgcgaggaagguggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).............))))) Crystal structure of the Corn aptamer mutant A14U in complex with ThT; RNA (36-MER) 6e84 A 36 2.901 URS0000BC4664_32630 31178406 32630 ggcgcgaggaaggaggucugaggaggucacugcgcc <<<<<..........................>>>>> (((((...(........).((.....))...))))) Crystal structure of the Corn aptamer in complex with TO; RNA (36-MER) 6e8s A 38 2.35 URS0000E60B64_32630 30992561 32630 gcuacgaaggaaggauugguaugugguauauucguagc <<<<<<<<......................>>>>>>>> ((((((((......................)))))))) Structure of the iMango-III aptamer bound to TO1-Biotin; iMango-III aptamer 6e8s B 38 2.35 URS0000E60B64_32630 30992561 32630 gcuacgaaggaaggauugguaugugguauauucguagc <<<<<<<<......................>>>>>>>> ((((((((......................)))))))) Structure of the iMango-III aptamer bound to TO1-Biotin; iMango-III aptamer 6e8t D 35 2.9 URS0000E60B6C_32630 30992561 32630 guacgaaggagguuugguaugugguauauucguac <<<<<<<.....................>>>>>>> (((((((.....................))))))) Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin; RNA (35-MER) 6e8t C 36 2.9 URS0000E60B6C_32630 30992561 32630 guacgaaggaagguuugguaugugguauauucguac <<<<<<<......................>>>>>>> (((((((......................))))))) Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin; RNA (35-MER) 6e8t B 36 2.9 URS0000E60B6C_32630 30992561 32630 guacgaaggaagguuugguaugugguauauucguac <<<<<<<......................>>>>>>> (((((((......................))))))) Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin; RNA (35-MER) 6e8t A 36 2.9 URS0000E60B6C_32630 30992561 32630 guacgaaggaagguuugguaugugguauauucguac <<<<<<<......................>>>>>>> (((((((......................))))))) Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin; RNA (35-MER) 6e8u B 37 1.55 URS0000E60B92_32630 30992561 32630 guacgaaggaagguuugguaugggguaguugucguac <<<<<<.........................>>>>>> ((((((....(..................).)))))) Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin; RNA (37-MER) 6i1l B 40 2.98 URS0000E60B7C_32630 30639240 32630 aauuucuacuguuguagauagauuaaaagguaauucuauc ....<<<<<....>>>>>...................... ....(((((....)))))...................... Crystal structure of FnCas12a in complex with a crRNA guide and ssDNA target; crRNA (40-MER) 6i1l E 40 2.98 URS0000E60B7C_32630 30639240 32630 aauuucuacuguuguagauagauuaaaagguaauucuauc ....<<<<<....>>>>>...................... ....(((((....)))))...................... Crystal structure of FnCas12a in complex with a crRNA guide and ssDNA target; crRNA (40-MER) 6jjh B 14 1.74 URS0001A16A80_101947 32453431 101947 ggcucggcggcgga .............. .............. Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4; RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3') 6jji B 14 3.1 URS0001A16A80_101947 32453431 101947 ggcucggcggcgga .............. .............. Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1); RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3') 6n5k A 125 3.098 RF00379 URS000197CF5B_9606 0180001 0010468 9606 nguugccgaauccaugauuugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<.....>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((.....)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (125-MER) 6n5n A 125 2.951 RF00379 URS000197CF65_9606 0180001 0010468 9606 nguugccgaauccgaugcucgguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<<...>>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((.....)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (125-MER) 6n5o A 126 2.708 RF00379 URS000197CF62_9606 0180001 0010468 9606 nguugccgaauccgaucuggcgguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<......>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((......)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (126-MER) 6n5p A 127 2.991 RF00379 URS000197CF7A_9606 0180001 0010468 9606 nguugccgaauccaugucguuugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<.......>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((.......)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (127-MER) 6n5q A 128 2.946 RF00379 URS000197CF57_9606 0180001 0010468 9606 nguugccgaauccaccuagaaaugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<........>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((........)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (128-MER) 6n5s A 123 2.802 RF00379 URS000197CF70_9606 0180001 0010468 9606 nguugccgaauccaaaguugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaagga ...[[[[....<<<....>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>. ...((((....(((....)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]]. Structure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch Scaffold; RNA (123-MER) 6n5t A 126 2.787 RF00379 URS000197CF7C_9606 0180001 0010468 9606 nguugccgaauccccuagaaagguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<........>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....((........))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch Scaffold; RNA (126-MER) 6nd5 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 30733327 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<....<......(..>.....>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<<..>>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..((((........)))..))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((......(((((.((....)).)))))...)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution; 23S Ribosomal RNA 6nd5 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 30733327 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((...))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((....)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((.(((((((((.(......[..(((((...((......((((((((....))))))))...))...........].)))))).))))))))).)).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution; 23S Ribosomal RNA 6o97 1A 2871 2.75 RF02540,RF02541,RF00002 URS00001698E8_300852 30793894 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>..>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<.......(......>>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>>.......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<<..>>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.((((((((...(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))).))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..((..............)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..(...........)...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution; 23S Ribosomal RNA 6o97 1x 76 2.75 RF00005 URS000041AF00_562 30793894 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution; P-site tRNA 6o97 2A 2800 2.75 RF02540,RF02541,RF00002 URS00001698E8_300852 30793894 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (.(......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((...))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...((((((((.(..(...............).)..))))))))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((.(..).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...(((((((((((((.((.((.....)))).)))).....)))))))))..)))(...(((....))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((.(((((((.....))))))).))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(.........(((((...((.......((((.((....)).))).)...)).............)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((((...........))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....).) Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution; 23S Ribosomal RNA 6o97 2x 76 2.75 RF00005 URS000041AF00_562 30793894 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(.(((..]....))).)))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution; P-site tRNA 6od9 A 62 4.102 RF01750 URS0000868535_861 31282869 0006730,1900371 861 guuauaugacugacggaacguggaauuaaccacaugaaguauaacggccgaccgucugggcg <<<<<<<..<.(((((...<<<<......>>>>..>..>>>>>>>.<<<..)))))..>>>. (((((((..(.[[[[[...((((......))))..)..))))))).(((..]]]]]..))). Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser; RNA (75-MER) 6od9 B 62 4.102 RF01750 URS0000868535_861 31282869 0006730,1900371 861 guuauaugacugacggaacguggaauuaaccacaugaaguauaacugccgaccgucugggcg .<<<<<<..<.(((((...<<<<......>>>>..>..>>>>>>.<<<<..)))))..>>>> ..(((((..(.[[[[[...((((......))))..)..)))))...(((..]]]]]..))). Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser; RNA (75-MER) 6of1 1A 2871 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 30936109 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>..>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...((..........)..).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution; 23S Ribosomal RNA 6of1 2A 2800 2.8 RF02540,RF02541,RF00002 URS00001698E8_300852 30936109 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<.<<..........>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>>.......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.(((..(...((..........))...)...))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((......(((((.((....)).)))))...)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution; 23S Ribosomal RNA 6of1 1x 76 2.8 RF00005 URS000041AF00_562 30936109 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution; P-site tRNA 6of1 2x 76 2.8 RF00005 URS000041AF00_562 30936109 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution; P-site tRNA 6ol3 C 111 2.74 RF00102 URS0000EEACE9_10515 31253805 10515 ggaccucgcaaggguaucauggcggacgaccggguucgaaccccggauccggccguccgccgugauccaugcgguuaccgcccgcgugucgaacccaggugugcgaggucc <<<<<<<<<<.<<<<<<<<<<<<<<<<<.<<<<<<<<<.....>>>>>>>>>.>>>>>>>>>>>>>.<<<<<<<..(((..>>>>>>>....>>>>.))).>>>>>>>>>> ((((((((((.(((((((((((((((((.(((((((((.....))))))))).))))))))))))).(((((((..[[[..)))))))....)))).]]].)))))))))) Crystal structure of an adenovirus virus-associated RNA; Adenovirus Virus-Associated (VA) RNA I apical and central domains 6ozj D 15 2.247 31444105 32630 ciauaugcaugcauu ............... ............... Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine in the absence of divalent cation; DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3') 6ozr C 15 2.15 31444105 32630 ciauaugcaugcauu ............... ............... Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 15 min soak in 10 mM Mg2+; DNA/RNA (23-MER) 6ozr D 15 2.15 31444105 32630 ciauaugcaugcauu ............... ............... Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 15 min soak in 10 mM Mg2+; DNA/RNA (23-MER) 6pq7 C 37 3.0 URS0000E60B92_32630 31397326,20124702 32630 guacgaaggaagguuugguaugggguaguugucguac .<<<<<.........................>>>>>. ((((((....(..................).)))))) Structure of the iMango-III fluorescent aptamer at room temperature.; RNA (37-MER) 6prv A 58 2.71 RF02541 URS0001A16A78_562 31874150 0003735 0005840 562 nccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggu <<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>> (((((.(((..(((.........)))..))).....(..(((......)))).))))) 58nt RNA L11-binding domain from E. coli 23S rRNA; 23S rRNA 6prv B 58 2.71 RF02541 URS0001A16A78_562 31874150 0003735 0005840 562 nccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggu <<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>> (((((.(((..(((.........)))..))).....(..(((......)))).))))) 58nt RNA L11-binding domain from E. coli 23S rRNA; 23S rRNA 6prv C 58 2.71 RF02541 URS0001A16A78_562 31874150 0003735 0005840 562 nccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggu <<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>> (((((.(((..(((.........)))..))).....(..(((......)))).))))) 58nt RNA L11-binding domain from E. coli 23S rRNA; 23S rRNA 6qdv 6 97 3.3 RF00026 URS000035C796_9606 30705154 0030621 0000244,0000353 0005688,0046540 9606 gugcucgcuucggcagcacauauacuaaaauuggaacgauacagagaagauuagcauggccccugcgcaaggaugacacgcaaauucgugaagcguu <<<<<.<......>>>>>>.....................................<<...<<<.....>>>....>>................... (((((.((....))))))).....................................((..((((.....)))..).))................... Human post-catalytic P complex spliceosome; U6 snRNA 6qnq 13 1506 3.5 RF00177,RF01959,RF01960 URS000080E226_300852 31175275 0003735 0005840 300852 uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcggggucuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucacc .....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<.<.....>.>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>....<<<<.<<<<<....>>>>>.>>>>...<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<......<.<<<<.....>>>>..>.......>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>....<<<....>>>...>>>>>>>>..<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<...<<<.....>>>.>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>....>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>.......<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>.........<<<<<<<<<....>>>>>>>>>........ .....(((...[.[[[...))).((((.(((((..((((((((.....(((.(((..(((..((.(.((.(((.....))).)).).)))))......(((......((((((((..((...(((((((.(((((....((((.(....).)))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).......(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..((((((((....((((((((....((((((....((........)).......))))))....).......((....)).)))))))...)))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((.....)))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((.(..(((((((.((......((........))..........(((((((..(....(((((((..(.(((((....))))).).....(.....).....))))))).).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.((((.((.......(((.....)))......))).))).....(((((....)))))........)))).....).).)))...)).)))))....)))))))...))..))))))).(...((((((......(((..(...((((....))))...)....)))......))))))......(....(((((((........)))))))....)..)..).))).....(((((((..........)))))))......))...)))))))))).))..(.(..((.(.((((..((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))..))))..).))...)..)..(((((((((....)))))))))}....... 70S ribosome initiation complex (IC) with experimentally assigned potassium ions; 16S ribosomal RNA 6qnq 1H 2879 3.5 RF02540,RF02541,RF00002 URS0000868533_300852 31175275 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuuuuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaacgaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguuggcuuagaagcagccaucauuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuu 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70S ribosome initiation complex (IC) with experimentally assigned potassium ions; 23S ribosomal RNA 6qnq 16 120 3.5 RF00001 URS00005AB4A7_300852 31175275 0003735 0005840 300852 ucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga <<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>.......>>>.>>>>>>>>>>> (((((((((((....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......))).))))))))))) 70S ribosome initiation complex (IC) with experimentally assigned potassium ions; 5S ribosomal RNA 6qnq 1G 1510 3.5 RF00177,RF01959,RF01960 URS000080E226_300852 31175275 0003735 0005840 300852 guuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcggggcuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccuccu ......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<..>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>....<<<<.<<<<<....>>>>>.>>>>...<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<.<..<<<<<<<.<..<<<......>>>.....>.>>>>>>>...>.......<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>...<<<<....>>>>..>>>>>>>>..<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<...<<...<<<.....>>>.>>....>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>....>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>.......<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>.........<<<<<<<<<....>>>>>>>>>............ ......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(.((((.((())).)))).).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..((((((((....((((((((....((((((....((........)).......))))))....).......((....)).)))))))...)))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((.(((((...))))).))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((.(..((((((((((......((........))..........(((((((..(...((((..((..(((((........)))))....(((....)))...))..))))).((.(((...((((((......(((((((((....)))...(((......)))...)))))).....((((.((((((...(....(((.....)))..)....)))))).....(((((....)))))........)))).......).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(....(((....)))....)....))).....)))))))......(....(((((((........)))))))....)..)..).))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... 70S ribosome initiation complex (IC) with experimentally assigned potassium ions; 16S ribosomal RNA 6qnq 14 2879 3.5 RF02540,RF02541,RF00002 URS0000868533_300852 31175275 0003735 0005840 300852 caagaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguuggcuuagaagcagccaucauuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuug <<<<.......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<.....<<...<<<<<.<<<<.<<<....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>..>>>>>..>>.>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<....>>>>>>>>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.......>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<.....<.<<......>>.>......>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<.<<<.<<....<<.........>>....>>.........<........>...>>>.>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>>>.>..>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<<........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>.>>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<......<.......<<<<<<<<....>>>>>>>>....>................>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<<..<<.......>>>..>>>>>>...>>>>.>.......<<<<<.<.<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>...>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<.............>>>>....>>>.>>>>.......>>>>>>>...<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>.....>>>> 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70S ribosome initiation complex (IC) with experimentally assigned potassium ions; 23S ribosomal RNA 6qnr 13 1516 3.1 RF00177,RF01959,RF01960 URS000080E226_300852 31175275 0003735 0005840 300852 uuuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccuccuu ......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<.<...>.>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<...<<<<<<......>>>>>.>...>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>....<<......>>...>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<<.....>>>>>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............. ......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(.((.((..((...))..)).)).).)))))......(((......((((((((..((...(((((((.(((((.....(((((....)))))......)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((.........)).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((((...(.((((....)))).)....((((....))))..))))))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((....(..(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............ 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 16S ribosomal RNA 6qnr 1K 76 3.1 RF00005 URS00005AA258_83333 31175275 0030533 0006412 83333 gcccgganagcucagucgguagagcaggggauugaanauccccgunuccuuggnucgauuccgaguccgggcacca <<<.<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>.>>>.... ((...(......(.....[..)....((((.........)))).....(((((..]....))))).)...)).... 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; E. coli tRNAPhe 6qnr 2K 76 3.1 RF00005 URS00005AA258_83333 31175275 0030533 0006412 83333 gcccgganagcucagncggnagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; E. coli tRNAPhe 6qnr 1H 2890 3.1 RF02540,RF02541,RF00002 URS0000868533_300852 31175275 0003735 0005840 300852 ggucaagaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuuuuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaacggccgaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguuggagcagccaucauuuaaagagugcguuagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuugacc .<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.....>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...(((....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<....>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....<<..>>....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.<..<<<<<......>>>>.>..>.>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<.......>...>>.........<<....>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..((((...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.........<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<.<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>.>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<.(((..>>>>..)))>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<<..<<.......>>>..>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))))>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>. .(((((((......((((((((((.....(((..((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.....)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((....))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....((()))....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((...(.(.((......)).)..)...)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.......(((((..(...(.......)...)......(............).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((....)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((...........((.((..(.(.......(((((((....)))))).)...).)............)).))..))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.(((.......)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))))))). 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 23S ribosomal RNA 6qnr 16 122 3.1 RF00001 URS00005AB4A7_300852 31175275 0003735 0005840 300852 aaucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga ..<<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>.......>>>.>>>>>>>>>>> ..(((((((((((....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......))).))))))))))) 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 5S ribosomal RNA 6qnr 1G 1513 3.1 RF00177,RF01959,RF01960 URS000080E226_300852 31175275 0003735 0005840 300852 uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccuccuuu .....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<..>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<.<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<.<....>.>>>>>....<<......>>...>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>..>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. .....((((..[.[[[..)))).((((.(((((..((((((((.....(((.(((..(((..((.((((.(((((..))))).)))).)))))......(((......((((((((..((...(((((((.(((((....((((.(....).)))).....))))).....(((.(((((....))))).)))....((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).......(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((.(((...))).))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((...(((((.(....).)))))...((((....))))...)))))))).((.(((....(((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((....(..(((.....)))).....))))))).....(((((....)))))........)))).....).).)))...)..)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 16S ribosomal RNA 6qnr 2L 76 3.1 RF00005 URS00005AA258_83333 31175275 0030533 0006412 83333 gcccgganagcucagncgguagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; E. coli tRNAPhe 6qnr 14 2876 3.1 RF02540,RF02541,RF00002 URS0000868533_300852 31175275 0003735 0005840 300852 ggucaagaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaacggcccgaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguugaucauuuaaagagugcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuugacc <<<<<<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<....>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....<<...>>....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<.<........>.>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<..<<.......>>...............>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<....<<.......<<<<<<<<....>>>>>>>>....>>..............>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<.............>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>> .(((((........((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((..)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((....))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))................)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[.....((((((.....(.....((..(((((((((......{..(((....(.....)...........()....))).....))))))))).))..........]]].)....)))))).)))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((....)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.(((((.....))))).))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(.........((..(...........((....(.(..).)....))..................)..))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((....(.......)....))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...))))).<.)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))...((.......)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))..>))))).)))...))))......))))). 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 23S ribosomal RNA 6qnr 1J 121 3.1 RF00001 URS00005AB4A7_300852 31175275 0003735 0005840 300852 aucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga .<<<<<<<<<<.....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>.......>>>..>>>>>>>>>> .((((((((((.....((((((.(....(((((((...(.....)...))))..)))...).)))).))(((.......((.(((((....))))).)).......)))..)))))))))) 70S ribosome elongation complex (EC) with experimentally assigned potassium ions; 5S ribosomal RNA 6rw4 A 955 2.97 RF00177 URS0001A24B4C_9606 32522994 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3; 12S mitochondrial rRNA 6rw5 A 955 3.14 RF00177 URS0001A24B4C_9606 32522994 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<...<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<.......>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<......>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>...>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3; 12S mitochondrial rRNA 6sj6 A 2585 3.23 RF02540,RF02541,RF00002 URS00001C3329_93061 32245971 0003735 0005840 93061 uuaaguuauuaagggcgcacgguggaugccuuggcacuagaagccgaugaaggacguuacuaacgacgauaugcuuuggggagcuguaaguaagcuuugauccagagauuuccgaauggggaaacccagcaugaguuaugucauguuaucgauaugugaauacauagcauaucagaaggcacacccggagaacugaaacaucuuaguacccggaggaagagaaagaaaucgauucccuuaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuugcuuguugggguuguaggacacucuauacggaguuacaaaggacgacauuagacgaaucaucuggaaagaugaaucaaagaagguaauaauccuguagucgaaaauguugucucucuugaguggauccugaguacgacggagcacgugaaauuccgucggaaucugggaggaccaucuccuaaggcuaaauacucucuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagaaccugaaaccgugugcuuacaaguagucagagcccguuaaugggugauggcgugccuuuuguagaaugaaccggcgaguuacgauuugaugcaagguuaagcaguaaauguggagccguagcgaaagcgagucuguagggcguuuaguauuuggucguagacccgaaaccaggugaucuacccuuggucagguugaaguucagcugaauggaggaccgaaccgacuuacguugaaaagugagcggaugaacugaggguagcggagaaauuccaaucgaaccuggagauagcugguucucuccgaaauagcuuuagggcuagccucaagugaugauuauuggagguagagcacuguuuggacgaggggccgguuaccgaauucagacaaacuccgaaugccaauuaauuuaacuugggagucagaacaugggugauaagguccguguucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggauguggcguugccgugacacugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggauuguccuuuggacaaugguaggagagcguucuaagggcguugaagcaugaucguaaggacauguggagcgcuuagaagugagaaugccggugugaguagcgaaagacgggugagaaucccguccaccgauugacuaagguuuccagaggaaggcucguccgcucuggguuagucggguccuaagcugaggccgacaggcguaggcgauggauaacagguugauauuccuguaccaccuauaaucguuuuaaucgauggggggacgcaguaggauaggcgaagcgugcgauuggauucguugauuucacacugccgagaaaagccucuagauagaaaauaggugcccguaccgcaaaccgacacagguagucaagaugagaauucuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcucuuuaggguuaacgcccagaagagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcuaaaccguaaggugauguauaggggcugacgccugcccggugaguaaacggcgaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaaucauaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccguggagcuuuacuguagccugauauugaaauucggcacacuguguuggcuuucuaacccgcaccacucguggugggagacagugucaggcgggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcucaaagguucccucagaaugguuggaaaucauucauagaguguaaaggcauaagggagcuugacugcgagaccuacaagucgagcagggucgaaagacggacuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuaccccggggauaacaggcuuaucucccccaagaguucacaucgacggggagguuuggcaccucgaugucggcucaucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcgguacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgugggcguaggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacauaccucugguguaccaguugucgugccaacggcauagcuggguagcuauguguggacgggauaagugcugaaagcaucuaagcaugaagccccccucaagaugagauuucccaauuauaagaucccucaaagaugaugagguuaauagguucgagguggaagcauggugacauguggagcugacgaauacuaaucgaucgaagacuuaau <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<.<<.((..((.>>......<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<.<<<.........>>>.>>>.>.>>>....<<<<<......<......>.......>>>>.>.........<<..>>...<<<<......<<.....>>.....>>>>...(((....<<.<<<<<....>>>>>.>>......<<<<...<..................<<<<<<<<..<<<...<<<<<......>>>>><<......((......>>.))...>>>....>>>>>>>>......>......>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<......>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<............>.<<<<<<....<<<<<<<.<.<<...<<<...<<<.....>>>...>>>...<......>....<<...>.>.......>>>..>>>>>>>..<<....<<<<<<<.....<<<<<<<<<..<<<....<<<<<..>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>....>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<............<<<<<<<...................>>>>>>>............>>>>.>>>>>..>>>>>>>.>>..<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<<<<.....(((.((...........<<...<<<.<.<.....>.>.>>>..>>...........>>>.....)).))).>>>...>>>>>>>.<<<<<<...>>>>>>.....>>>>>><.<<<<<<<.........<<<<<.<......>.>>>>>......>>>>>>>..>.....>>>>>><......<.....<<<<<.........>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>.....(<<<<.<.<<.<<<...<<<....>>>...>>>..>>>...<<<<<........>>>>>).<<<<<.............<<...<<<<....<.....<<<...............................>>.>.....>........>>>.>.>>........>>>>>>>>>..>>.....<<......>>>>>>>.<<<.......>>>..>>>>..<<<<....<<<<<<<<..<................<<<<....<....>.....>>>>.<<<<<<<.<<........>>.>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<......>>.......>>>>>>>..<<<<.<<<............>>>.....................<<<.......>>>............>>>>...>>.>>>>>>>.....>..>>>>>>>>.>>>>.>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<..<<<<<<<<<..<<<.<.<<<.......>>>>..>>>.....<<.<<<<<....>>>>>>>.....>>>>>>>>>...>>>>..<<<<.....>>>><<<.<<...........>>.>>>..<<...<<<<<<<....<<.............>>......<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<.<<<.<.<<<...<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>......>>>...>...>>>..>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<.....<....>....>>>>>>>.<<<<<...<<.<...<<<<<<<<<........>>>>..>>>>>...>.>>.>>>>>...<<<.<..<<<<.............>>>>...>>>>.>>>>.......>>>>>>>.........<<<.<<<<.........>>>>....<<<<<<<<.<<<.....<<<<....>>>>....>>>..>>>>>.>>>....>>>....>>>>>>. ((((((......((((((((((.....(((..(((((((((((.(......((((((.......[)))...].(((((....(((.......))).......)))))...))).....((....)).((((((........)))))).(((((.(.............).))).)).).....(((((......(...[..).......)))).).........((..))...((((......((.]...)).....))))...(((....(......(....)......)......(((((..(......................(((.(.(.(...(((((......))))).[(...).(((.....].)))...).)...).)))...........)..)..)))).....(((((((...........))))))).......((((..[[[[))))...)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).{.(.(........).).((((((..(.(((((((.(......((....(((.....)))....))...((....))..((((...))))........)..)))))))..((.(...((((((.....((((((((((.((.(....((((..))))....){.))...(((.(((((........))))))))..).))))))))).(.(((.....)))...)..))))))......).))).((((((....(((((....)))))(((((((((.....(((((((.....(.(....((.((((...................)))).))...)..).....)))).)))....))))))).))..((((((((((......))))))))))....(((......)))...((((.(((...((([[[...(.((.(((.....(.....((..........(...).........))...........]]].)...))).))))))...)))))))((((((.....))))))....))))))(((((((((.((.......((((.((....))]))))....)).))))))).)).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((..(...((....(((....)))....))...)....((((..........))))]].(((..............((...(.((....((.....(.................................).....))(..).....)).)..)).........))).)))).))).....((......))..))).(((.......)))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((((.((........)).)))))))............((((((.((.}.((.........))...(((((((.....(((....))).......))))))).]((((...(..(........))..........(.............((.......)).....).......))))...))..)))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..((((((((.(((.((......((((.(((((...((((..(((((((((...((.(...(.......)...).))......((.(.((.(..).)).))).....)))))))))...))))..(((......[)))(((..(..........])..)))(([[......[.......(...............)......[.)..(((.].......]......((((..(((...{..)))..)))).(((....))).]]))).......(((((((.((..]]]]..))))))))).....)}.......)))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......(.((.(.((((..(((((..............))..))).(((((.....))))).....))))...)...))..).....(((((((....))).))))....))..)))))))))))[...(((((((...((((..((.(((......(....).....))).)).((.((...(.((...((((((.(((......))).)..)))))...)).).)).))...(((....((.................))....))).))))..]....)))))))((())....(((((((((.......)))))....((((((((.(((.....((........))....)))..))))).)))...))))...))))))). Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus; 23S ribosomal RNA 6t3k A 390 3.44 RF02001,RF01998 URS0001A24B61_182710 32503992 0000373 182710 gugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucaggagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaacggccguauaccgaacgguacguacggucgugug .....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... ..[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..((((.(((((((..((((.]......))))...)))).]]]]]]]...))).))))..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exon; Group IIC Intron Ribozyme 6t3r A 389 3.57 RF02001,RF01998 URS0001A24B48_221109 32503992 0000373 221109 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucaguagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaacugccguauaccgaacgguacguacgguagugug ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((....((((((((((..((((.]......))))...)))).]]]]]]]...))))))....)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exon; Group IIC Intron Ribozyme 6tbv 16S1 1534 2.7 RF00177,RF01959,RF01960 URS000081169C_83333 32094585 0003735 0005840 83333 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<<....>>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<<..>>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<......<<<.<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<....<.<<<....>>>>......<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<<..>>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((((..)))))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((.(...(...((.((((((.......)))))))).....)....).)))....)).(((.([[[...(((((.....((.]]])).......)))))).)))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))).))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((....((.((....)).))......(....)...))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2); 16S rRNA 6tbv 23S1 2897 2.7 RF02540,RF02541 URS0000A7632D_83333 32094585 0003735 0005840 83333 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgnggauaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<....<.<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<<<.....>>.>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<<.<<....>>..>>>>>>.>.....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<...........<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>.............>>>>..>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((((.....)).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(((((.(((..(((.........)))..))).....(...((......)).).)))))...)))..))))).))...........]]].)...))))))))))...)))))))((((((((......))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((.((((.(.((.(..........(.(...(((......((((((((....))))))))...))).............).).).)).).)))).))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2); 23S rRNA 6tbv 05S1 120 2.7 RF00001 URS0000049E57_83333 32094585 0003735 0005840 83333 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggcau <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>>. ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))). Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2); 5S rRNA 6tc3 16S1 1534 2.7 RF00177,RF01959,RF01960 URS000081169C_83333 32094585 0003735 0005840 83333 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<<....>>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<<..>>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<<<.<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<....<.<<<....>>>>......<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((((..)))))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((.(...(...((.((((((.......)))))))).....)....).)))....)).(((.([[[...(((((.....((.]]])).......)))))).)))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))).))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((....((.((....)).))......(....)...))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1); 16S rRNA 6tc3 23S1 2897 2.7 RF02540,RF02541 URS0000A7632D_83333 32094585 0003735 0005840 83333 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgnggauaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<....<.<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<<<.....>>.>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((((.....)).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(((((.(((..(((.........)))..))).....(...((......)).).)))))...)))..))))).))...........]]].)...))))))))))...)))))))((((((((......))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((.((((.((((.(..........(.(...(((......((((((((....))))))))...))).............).).).)))).)))).))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1); 23S rRNA 6tc3 05S1 120 2.7 RF00001 URS0000049E57_83333 32094585 0003735 0005840 83333 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggcau <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>>. ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))). Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1); 5S rRNA 6ucq 2A 2800 3.5 RF02540,RF02541,RF00002 URS00001698E8_300852 31873307 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<.......>>>....<<..>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<.........>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<.<......<<<<<<<<....>>>>>>>>...>.>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((.(((...(((....((.((((.....((..........))......)))).))...)).)...))).)))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((.((((.().)))).))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((.(...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((...((.....))..))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...)....))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))((((...........))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((.......((((.((....)).))))....))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...((.((((.(.(((((.........)))))...).((][.[[[))....)))).))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome recycling complex; 23S Ribosomal RNA 6ufg B 77 2.929 RF00005 URS000197CF6B_1773 31740853 0030533 0006412 1773 gggccuauagcucaggcgguuagagcgcuucgcugauaacgaagaggucggagguucaaguccuccuaggcccgcca <<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[...)))).(((((.......))))).....(((((..]....)))))))))))).... Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-OH; RNA (77-MER) 6ufg A 162 2.929 URS000197CF59_1773 31740853 1773 ngcaucgauccggcgaucaccggggagccuucggaagaacggccaggcccaguagaaccgaacggguuggcccgucacagccucaagucgagcggccgcgcgaaagcguggcaagcgggguggcaccgcggcguucgcgcgaaagcguggcgucguccccgn <<<.....<<<<<......>>>>>..>>><<<<<......<<<<.>>>>........>>>>><<<...(((>>>.....)))............<<<<<<<....>>>>>>>..<<<<<<.......<<<<<<<.<<<<<....>>>>>>>>>>>>>>>>>> (((......((((......))))...)))(((((......((((.))))........)))))(((...[[[))).....]]].........[..(((((((....)))))))..((((((......](((((((.(((((....)))))))))))))))))) Co-crystal structure of M. tuberculosis ileS T-box in complex with tRNA-3'-OH; RNA (166-MER) 6up0 C 38 2.8 URS0000E60B64_32630 33376189,22505256,20124702 32630 gcuacgaaggaaggauugguaugugguauauucguagc <<<<<<<<......................>>>>>>>> ((((((((......................)))))))) Structure of the Mango-III fluorescent aptamer bound to YO3-Biotin; Mango-III fluorescent aptamer 6up0 D 38 2.8 URS0000E60B64_32630 33376189,22505256,20124702 32630 gcuacgaaggaaggauugguaugugguauauucguagc <<<<<<<<......................>>>>>>>> ((((((((......................)))))))) Structure of the Mango-III fluorescent aptamer bound to YO3-Biotin; Mango-III fluorescent aptamer 6v9b B 28 2.4 URS0001A24B55_32630 32386573 32630 aucgagggaguggugaggaugaggcgau ............................ ............................ Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin; RNA (28-MER) 6v9b D 27 2.4 URS0001A24B55_32630 32386573 32630 aucgagggaguggugaggaugaggcga ........................... ........................... Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin; RNA (28-MER) 6v9d B 28 2.8 URS0001A24B55_32630 32386573 32630 aucgagggaguggugaggaugaggcgau ............................ ............................ Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin; RNA (28-MER) 6v9d E 27 2.8 URS0001A24B55_32630 32386573 32630 aucgagggaguggugaggaugaggcga ........................... ........................... Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin; RNA (28-MER) 6vwv A 71 3.0 RF00167 URS000080E2A9_672 33741910 0009113 672 gggaagauauaauccuaaugauaugguuugggaguuucuaccaagagccuuaaacucuugauuaucuuccc .<<<<<<<<...<<<<<<......<<.>>>>>>........<<<<<<>>.....>>>>>>..>>>>>>>>. ((((((((((..((((((......[[.))))))[.....)]((((((]].....))))))..))))))))) Transitional unit cell 2 of adenine riboswitch aptamer crystal phase transition upon ligand binding; adenine riboswitch aptamer variant 6wtl A 124 2.85 RF00379 URS000197CF5D_9606 0180001 0010468 9606 nguugccgaauccauaugugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<<....>>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....(((....)))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-19b-2 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold; RNA (124-MER) 6wtr A 125 3.082 RF00379 URS000197CF84_9606 0180001 0010468 9606 nguugccgaauccuuuacuugguacggaggaaccgcuuuuugggguuaaucugcagugaagcugcaguagggauaccuucugucccgcacccgacagcuaacuccggaggcaauaaaggaaggag ...[[[[....<<.......>>..(((((....{........[[[[....<<<<<<.....>>>>>>..(((((.<<<<<<)))))..]]]]....}....)))))..]]]].....>>>>>>.. ...((((....((.......))..(((((....(.....{.(((((....((((((.....))))))..(((((.[[[[[[)))))..)))).}).)....)))))..)))).....]]]]]].. Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold; RNA (125-MER) 6wy2 B 10 1.928 URS000080E19F_32630 32941619 32630 ccggngccgg .......... .......... Crystal structure of RNA-10mer: CCGG(N4-methyl-C)GCCGG; RNA-10mer: CCGG(4-methyl-C)GCCGG 6wy2 C 10 1.928 URS000080E19F_32630 32941619 32630 ccggngccgg .......... .......... Crystal structure of RNA-10mer: CCGG(N4-methyl-C)GCCGG; RNA-10mer: CCGG(4-methyl-C)GCCGG 6wzr A 64 3.2 RF01750 URS0000868535_861 32795418 0006730,1900371 861 guuauaugacugacggaacguggaauuaaccacaugaaguauaacgaugccgaccgucugggcg <<<<<<<..<.(((((...<<<<......>>>>..>..>>>>>>>..<<<<..)))))..>>>> (((((((..(.[[[[[...((((......))))..)..)))))))...(((..]]]]]..))). Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA; Fusibacterium ulcerans ZTP riboswitch 6wzr B 57 3.2 RF01750 URS0000868535_861 32795418 0006730,1900371 861 uuauaugacugacggaacguggaauuaaccacaugaaguaugccgaccgucugggcg ..((((..(.<<<<<...<<<<......>>>>..)..))))(((..>>>>>..))). ..((((..(.[[[[[...((((......))))..)..))))(((..]]]]]..))). Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA; Fusibacterium ulcerans ZTP riboswitch 6wzs B 60 3.23 RF01750 URS0000868535_861 32795418 0006730,1900371 861 guuauaugacugacggaacguggaauuaaccacaugaaguauacgccgaccgucugggcg [[.((((..(.<<<<<...<<<<......>>>>..)..))))]](((..>>>>>..))). ((.((((..(.[[[[[...((((......))))..)..))))))(((..]]]]]..))). Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA; Fusibacterium ulcerans ZTP riboswitch 6wzs A 62 3.23 RF01750 URS0000868535_861 32795418 0006730,1900371 861 guuauaugacugacggaacguggaauuaaccacaugaaguauaacggccgaccgucugggcg <<<<<<<..<.(((((...<<<<......>>>>..>..>>>>>>>.<<<..)))))..>>>. (((((((..(.[[[[[...((((......))))..)..))))))).(((..]]]]]..))). Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA; Fusibacterium ulcerans ZTP riboswitch 6xa1 L5 3510 2.8 RF02540,RF02543 URS00021ED9B7_9606 33009412 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgggggcgcgggacauguggcguacggaagacccgcuccccggggggcccaaguccuucugaucgaggccccguggacggugugaggccgguagcggcccccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaanggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgggcggaucugggaccguccccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucggccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcuggggcggacuguucccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccgggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuagnacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgcccgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgcugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugugaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaagagacuuuuuucacugacccggugaggcgggggggcgagcucucgcuucuggcgccaagcgcccggcgccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguaauccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacagcgccgcggagccucgguuggccucggauagccggucccggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<..<<<<<<<<....<<<<......>>>>.((......<<<.....))>>>...>.>>>>>>>.>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<....<<<<<.<<<.>>>>>>>>..>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<.<<<<<<<<<<.<<<<...<<..<<<....<<<<......<<<<<..>>>>>.......>>>>...>>>........>>>>>>...>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<.<<<<<<<<<<<.<<<<....>>>>.>>>>>>>.>>>>.>.>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<..>>>>>.>>....>>>>>>......>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<..>>>..<<<<<...<<<..<<<..((((..(((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<......................<<<.<<<<<<<<<...<<<....<<<..<.<<<..........>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<..........<...<.....................>.........................>.....>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))..))))...<<...>>..................>>>>>>>>>....>>>>>>.<<<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>.>>.....>>>>>><<<....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<.............>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<....<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<.......................>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>...>>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<..<<<<<<<<<.<<<<<<<<...>>>>>>>>...<<<<<.....<<<<...........................<<<<<<<<..>>>>>>>>..>>>>..>>>>>....>>>>>>>>>...>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>..<<<<<<<.<<..<<<<....<<<........<<<<<.<<..>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<....<<<<<......>>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.)))))).))))....))))....((((((((((...((..((((((((..({((((......)))))[[(...).(((....}]])))...).))))))).))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..(((....(((((.(((.))))))))..))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((......(((((()))))).......))))..))))........))))))..)))))))))))....................((((((.((((((())))))).((((((.((((.(((((((((((.(((((((((((.((((....)))).)))))).))))).).))))))).)))...)))))))).))..(((((((()))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..((((..........)))..)..)))...((....))...(((..)))..(((((...(((..(((..[[.....[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((......................(((.((((((((.....((.....((....(((..(..().).)))....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{..............................................................)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((..........]].....]]]..............(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..((((((....((.....))..)))))....[[(((.((...(.....(((....)))..........((.((((.............)))))).......)....))...(((((........)))))]]((((....(((((...((((((......))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....(((((((.......))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......((((((..((..(....(.......(((((....(.[..).....)))))((.(((((((((((.....(.......).........)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(..((......((.(....).))......)))))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..))))))...)))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.(((((...(((((.(((((((((.((((((((...))))))))...(((((.....((((...........................((((((((()))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...a.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).(((....((((.....}.......))))....)))..)))...).).)).)..(((((((.((..((((.(..(((........(((((.((())).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. Structure of a drug-like compound stalled human translation termination complex; 28S rRNA 6xa1 Bv 75 2.8 RF00005 URS00021ED978_9606 33009412 0030533 9606 gucucugunncgcaancggagcgcnuucggcuguunaccgaaagnnuggugguucgngcccacccagggacgcca <<<<<<<..<<<<.......>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((.(((..((((.....[.))))...(((.......))).......((.((..]....)).))))).))).... Structure of a drug-like compound stalled human translation termination complex; P-tRNA 6xhv 1A 2871 2.4 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<<....>>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution; 23S Ribosomal RNA 6xhv 1x 76 2.4 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution; P-site tRNA 6xhv 2A 2800 2.4 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<.<......>.>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...........<<<<<<<<....>>>>>>>>..................>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(.(..........)..).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((...((.......(((((((....)))))))....))...........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution; 23S Ribosomal RNA 6xhv 2x 76 2.4 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution; P-site tRNA 6xhw 1A 2871 2.5 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (.(......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((..((..((.........))...))......(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((..((((((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).))))))))..))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....).) Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution; 23S Ribosomal RNA 6xhw 1x 76 2.5 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution; P-site tRNA 6xhw 2A 2800 2.5 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((..........)).)....))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(......[..(((((...((.......((((.((....)).))))....))...........].)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution; 23S Ribosomal RNA 6xhw 2x 76 2.5 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution; P-site tRNA 6xhy 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........))..))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((..((((((((.(......[..(((((..(.(.......((((.((....)).))))....).)..........].)))))).))))))))..))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution; 23S Ribosomal RNA 6xhy 1x 76 2.6 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution; P-site tRNA 6xhy 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 33462493 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution; 23S Ribosomal RNA 6xhy 2x 76 2.6 RF00005 URS000041AF00_562 33462493 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution; P-site tRNA 6xqe 1A 2871 3.0 RF02540,RF02541,RF00002 URS00001698E8_300852 32817463 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<<..>>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...(((.((((.....)))).)))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...(..............).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((.(((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...))).)))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((..))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((((((((((((.(.........(((((..(((......(((((.((....)).)))))...)))............)))))).)))))))))))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))(.((...(((((((.(.(((((.........)))))...).((.[.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution; 23S Ribosomal RNA 6xqe 2A 2800 3.0 RF02540,RF02541,RF00002 URS00001698E8_300852 32817463 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<.<.<<<<<<......>>>>.>>>..>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<.............>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....[.(((((((((......(...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)..)))))).))))....(((((((((.{.....)))))))))....].(((((}.[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)).).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((..()..))))))).))..........]]].)....))))))))))...)))))))(((((.(..).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..((((..((((.(((..{{..).))))))(((...((((((((.(((((((.((.....)))))))))......))))))))..)))(...((((..)))).....).))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..((....((...(((((....)))))...))....)))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((...((......((((((((....))))))))...)).............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).))....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution; 23S Ribosomal RNA 6xqe 2x 76 3.0 RF00005 URS000041AF00_562 32817463 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution; P-site tRNA 6xrq B 14 1.21 URS0001A16A80_101947 38876382 101947 ggcucggcggcgga .............. .............. Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus; RNA (5' GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A-3') 6xrq A 14 1.21 URS0001A16A80_101947 38876382 101947 ggcucggcggcgga .............. .............. Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus; RNA (5' GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A-3') 6y0t A 27 1.393 URS00021ED96F_32630 32630 ugcuccgaguacgagaggaaaggagug .<<<<<...............>>>>>. .(((((.....(....)....))))). Sarcin Ricin Loop, mutant C2666A U2653G C2667A; RNA (27-MER) 6y0t B 27 1.393 URS00021ED96F_32630 32630 ugcuccgaguacgagaggaaaggagug .<<<<<...............>>>>>. .(((((.....(....)....))))). Sarcin Ricin Loop, mutant C2666A U2653G C2667A; RNA (27-MER) 6yef a 1545 3.2 RF00177,RF01959,RF01960 URS00019B8AE6_93061 32852796 0003735 0005840 93061 uggagaguuugauccuggcucaggaugaacgcuggcggcgugccuaauacaugcaagucgagcgaacggacgagaagcuugcuucucugauguuagcggcggacgggugaguaacacguggauaaccuaccuauaagacugggauaacuucgggaaaccggagcuaauaccggauaauauuuugaaccgcaugguucaaaagugaaagacggucuugcugucacuuauagauggauccgcgcugcauuagcuaguugguaagguaacggcuuaccaaggcaacgaugcauagccgaccugagagggugaucggccacacuggaacugagacacgguccagacuccuacgggaggcagcaguagggaaucuuccgcaaugggcgaaagccugacggagcaacgccgcgugagugaugaaggucuucggaucguaaaacucuguuauuagggaagaacauauguguaaguaacugugcacaucuugacgguaccuaaucagaaagccacggcuaacuacgugccagcagccncgguaauacguagguggcaagcguuauccggaauuauugggcguaaagcgcgcguaggcgguuuuuuaagucugaugugaaagcccacggcucaaccguggagggucauuggaaacuggaaaacuugagugcagaagaggaaaguggaauuccauguguagcggugaaaugcgcagagauauggaggaacaccaguggcgaaggcgacuuucuggucuguaacugacgcugaugugcgaaagcguggggaucaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuaggggguuuccgccccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacggggacccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaaaucuugacauccuuugacaacucuagagauagagccuuccccuucgggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuaagcuuaguugccaucauuaaguugggcacucuaaguugacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugauuugggcuacacacgugcuacaauggacaauacaaagggcagcgaaaccgcgaggucaagcaaaucccauaaaguuguucucaguucggauuguagucugcaacucgacuacaugaagcuggaaucgcuaguaaucguagaucagcaugcuacggugaauacguucccgggucuuguacacaccgnccgucacaccacgagaguuuguaacacccgaagccgguggaguaaccuuuuaggagcuagccgucgaaggugggacaaaugauuggggugaagucguaacaagguagccguaucngnnggugcggcuggaucaccucc ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<....<<..........>>....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<<<<.....<<<<<<....>>>>>>......>>>>......<<<<<<<<<....>>>>>>>>>......<<<<<<...>>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.......<<<....>>>......>>>>....<<<<<<.........................................>>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<<..<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<.<.<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>..>>>>>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<.<<<......<<<<<....>>>>>.....<<<<..>>>>...>>.>.>..<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<..<<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>.......<<.<.<<<<.<<<..<<<<<<..<<<<....<.<<<<..<<<..<<<...>>>.>>>.>>>>.>...>>>>..>>>>>>..>>>.>>>>..>.>>.........<<<<<<<<<....>>>>>>>>>........... ....((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(((.....(((........))).....))).)))))......(((.......(((((((..((...(((((((.(.((......(..((....))..).......)).)............(((....)).)...........(((.((...)).))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((.........................................))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(.(.(((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))))..)...))))...))))....((((((....(...((((.........))))...).))))))......{...((((((..((((((((((((......))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(......(.......((..(....)..))......((....)).....).....).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..(((...))).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}.......... 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus; 16S rRNA 6yef A 2881 3.2 RF02540,RF02541,RF00002 URS00001C3329_93061 32852796 0003735 0005840 93061 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<.>>>>>>>......<<<<<<<<<<<<<.......<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>.>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>.>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<...<<...<.....>...>>...>>>>>>>>..>>.>.....>>>>>.>>>>..>>>>>>>.>>..<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<.<<<<........<<.....<...<<...........>>...>..........................>>....>>>>.>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<.>>>>>>>....>>>>>><.<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>..>.....>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<.<.<<<...<<<....>>>...>>>..>>>...<<<<<........>>>>>))<<<<<<<..<<<...<<<<....<<<<..<<...<<<<<.<.<<<.....{...>>>.>.<....<<<<...<<<.<<<<<<..<<.....>>.>>>>>>......>>>...>>>>.....>............>>>>>....>>...>>>>.........>>>>..>>>.....>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<.......>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<.<<<<....>>>>.>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<<.<<....>>..>>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<<.<<<...<.<<<...........<<<<<..<<<......<<<.<<<......>>>.>>>...>>>............>>>>>..>>>.>...>>>.>>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.....>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<..}...>>>>>..>>>>>...>>>>.>>>>>...<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>>.<<<..>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. ((((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))).)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((.)))))))....[.(((((((((((((........(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))).)))))..)))))....(((((((...{.......)))))))....].(((((}.[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((.(((((..(((...(((.....)))...)))...((....))..((((.....)))).....))))).)))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...).)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).]))))))......).))..((((((....(((((....)))))(((((((((...(((((((((.....(((...((((((((...((.............))...))))))))..)).).....))))).))))..))))))).))..((((((((((......))))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((.(((((.....{.(....(..(...(...........)...)............(......)....)...)...))))).)))).))...........]]].)...))))))))))...)))))))(((((((.)))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]]((((((....((...((((....(((((.((...(((((...........{.........((....(((.......(((((((.((.....)))))))))............))).....)).....().....)))))....))..)))))(..).....))))..)).......)))))))))).))).....((......))..))).(((.......)))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((((.((((....)))).)))))))(...).......(((((((((...((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.((((.(((.....((................(..(((........(..............).....))).............)......)).....))).))))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.......)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}..))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))((((..)))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...))))))). 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus; 23S rRNA 6yw5 aa 1435 2.85 RF00177,RF01959,RF01960 URS00021ED984_367110 33056988 0003735 0005840 367110 auagaugaguuuggugauggcucugauugaacacuguccaaauacuugacacaugcuaaucgaacguuuaauuuuggcucuuaauuaaaagugguguacaggugaguauaauauuuuuucgcuuaacuuaaagugaaggcaaauccuucauauugcaaaaggauaucuauauccgcuuuaagaggaugagaaaaguuucagagauagguaguuguuaaggucauggcuuaacaagccaauaauucucuuagucgaagcugaaaaggcugaucgaccacauugggaaugaaaaaaucccaaggcaaauagguacagcagugaggaaucuuggucaaugggcccacgccugaacugguaacuuggaggaaugagacgucgauuuaucgaguaaaauucuguauacauauugauaaugacaauauguacauuugucuugacuaauuacgugccagcagucgcggcaauacguaagagacuaguguuaaucaucauaaauagguuuaaaggguacucagacggaaaaauucgcccaaauauaggggacaauuuuucuagaguuuuauguaagaaggucguacucuagaguggagagauaaaauucugugauaccuaggggacggguaaaggcgaaggcaaucuuuuauguaaaaacugacgucgaaggacgaaggcaaagggaacaaaaaggauuagauaccccaguagucuuugcagacaauuaugaaugccauagguuagauuuuuaauuuagucuauaaaugaaaguguaagcauuucaccucaagaguaaggcggcaacgcaggaacugaaaucacuagaccguuucugacaccagcaaugaaguauguuauuuaauucggugacccacgaaaaaccuuaccacaauuugaauauuaauuauuaauacaaguguugcacggcugucuucaguugauguugcgaaacugugguucguuccauggaauuaacguaaacccuugcuuuauuuguaaauauuauaaagcaguucaccuuuauauaggaaaugauaaaagggaucaagacaagucaucauggccuaaauauugugggcuauagacgugccacauuuuccuaaacaaagagaugcaaaaaugugaauuuuagcuaaucucaaaaaauaggauaaaaauauacaaggauuguagucugaaauucgacugcaugaauaagaaauugcuaguaaucgugaaucaccaugacacggugaauauucccucggauugguacuaaccacucgucacaugcugaaaggagugcgugcaauaaguuugcuuuucuguuauaaguaaguagacauauagguuuagauguuauaauaggauccuucguaugcgcggcucugauuaguguuaagucgaaauacgguucguguaguggaaguugcacgggacuuaucaauguugaacaauacga ......((((..<<<<<<.))))<<<<<.<<<<<..<<<<<.<<.....<<<.<<<..<<<..<<.<<<<<<<..<<.>>..>>>>>>>.>>>>>......<<.........<<<<<<<.<<<...<<<<<<<<<<<<<.....>>>>>...........<<<<<<..>>>>>>>>>>>>>>.>>.>.(>>>>>>>...<<<<<..<<<..<<<<<<<<....)..>>>>>>>>>>>......>>>>>..<<<<.<<<<.....>>>>...>>>>.>>.<<<<<...........>>>>>.<<......>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>..>>>>>.<<<<......<<<<....>>>>.....>>>>....<<<<<<<<<.......>>>>>>>>>.....<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<<..<..<<<.<<<<<<<<.<<<<.......>>>..>>>>>>>>>...<<<<<......<<<<<<<.<..<<<<<<.<<<..<<<......>>>.....>>>>>>>>>..>........<<....>>.>>>>>>>......>>>>>...>>>...>.>>....<<<<<<...<<.....<<.........>>.....>>>>>>>>..........<<<<<<.<<<<<<<<<<<<...>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<........<<<....>>>......>>..>>>>>><<<<<...<<<<<....<<<<<<...<<<<<<<<<......<<........>>..........<<<<<<<.....<<<<<<<.>>>>>>>..<<.<<...<.<<<<<<<....<<<<<<<<<....>>>.<<<<......>>>>...>>>>>>.....<<<<<<<<<<<<...........>>>>>>>>..<<.<<<......>>>....>>....>>>>.....>>>.>>>...>.>.>>>>....>>>>>>>...>>.>>>>>>>.......<<<<<......<<<..<<..<<<<....>>>>..>>....>>>......>>>>>............<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<...........>>>>>>..........>>>>>..>>>.>>....<.<<<.<..<<<<<<<..<<<<<.<<<<<<....<.......<<<<<<<<<<<.....<<<<<......>>>>>....>>>>>>>>>>>.....>...>>>>>>>>>>>..>>>>>>>...>.>>>..>.....<<<<<<<<<....>>>>>>>>>......................... ......[[[[..(((((..]]]].((((.(((((..(((((.(((....(((.(((..(((..((.(((((((..(...)..))))))).)))))......(((......(.((((((((.((...(((((((((((((.....)))))...........((((((..)))))))))))))).))..)[))))))))..(((((..(((..((((((((....]..)))))))))))......)))))..((((.((((.....))))...))))))).((((((.........)))))).((......))...)))))).).....(.(((...(((((....)))).))))).))..))))).((((......((((....)))).....))))....(((((((((.......))))))))).....((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((.....(((.((((((((.((((.......)))..)))))))))..((((((.......(((((((((.((((((.((...((........))......)))))))).))).......((....)).)))))).......)))))..)))).....))....((((((...((.....((.........)).....))))))))......{...((((((.((((((((((((...))))))))))))..((..]]))....)))))))))).((........(((....)))......))...)))))(((((...(((((.(...(((((...(((((((((......((........))..........(((((((..(..(((((((.)))))))).((.(((....(((((((....(((((((((....))).((((......))))...)))))).....(((.((((((((...........))))))))..((.(((......)))....)).....))).....))).)))...)..)))))....)))))))...)).)))))))..(....(((((......(((..((...(((....)))...))....)))......)))))............(....(((((((........)))))))....)..)..))))).....((((((...........))))))......)...)))))..))).))..(.(..((.(..(((((((..(((((.((((((....(...(...(((((((((((.....(((((......)))))....)))))))))))..)..)...)))))))))))..)))))))...).))...)..)..(((((((((....)))))))))}......(...)............. The structure of the small subunit of the mitoribosome from Neurospora crassa; 16S rRNA 6ywe A 2837 2.99 RF02541,RF02540 URS00021ED918_5141 33056988 0003735 0005840 5141 guaauggauauaaagcuuauguuuauauauauauauaaguauauaaagagacuacuaccaauagcuacacuauguauuaaggagaguauaacuuaauuuauguuuaugauagagguuaucaacauaugaacucuuagagaaauuacuuaauaaacgaagugaauugaaauaucuuauuaacuucaggaaaagaaaucaaacgagauucuaugauuagugugaacgaaaauagagcagccuauuaaaauaaguaaaauggcuuuaaagcuguuugaauauuguggggaaccuuccucaaaggcuaaauauaauacaugaguuacagagaaaaguaccgugagggaaagcuuugaaauaguaguuuuauaagcagcucaagcaauaagaaagcgagagcguaccuuuugcauaaugggucaccaaguuaauuuuagaugcgagcgaauuagaugugcauaguuaaaccgaucauuaaaauaaugaauagugucuaaaguuagacccgaagccuggugaucuuacuauagucaggacuauaaagguccgaacggguuaucguugcaaagauauccgaagaacuaugguaagcgagugaaagacaacacugacuaggauagcugguuuucugcgaaaccuauaauaguaggcaauuuaaguaacaucuuaguagguacagaacuuaaucucagacaagauguagauuuucauaccuagguaugaaaugcauuuuuuuuuguauacaucgggggaucgugaagauuuuaucggugaguauguagacucggaaugacaaagaugaaucuugaauaaucagacauagaaugauaagguuguaugucaaaagggaaacagcccagaacaagaguuaagguuccaaaauuauuauuaagugaaauaaagaaaguuuuuauauaagucgacaagaagaugggcuuggaagcagccauaauuuaaagaucucguaacagagcacuuguuaaaucuuaaaagcaucgaaaauuuaacggaucuaaauaauauaccgaaaccuuguccauauguaacauuaguaauaauauuaauguuauuugaugggguagcagaacguugagugaaucuuagauuuuuuuuuuauaacuaaauauagaugauaacucaagugagaauggugacaugaguaacaaaaaagaguuuaagguaccuaaaagguaucuuagagucucgccuaaagcuuauggcuacgucaaguaacggccucuaaguuuauaaucugaagauuaugacgaugagaaaacuuugguaccaacauuuaaaagugaaaauugugcaggaaggauaaaccguaccuagaaucugaaacaaguaagcuaguagagaauacgaaggcgugaaugagauaacaaucauaaaggaacucggcaaacuaacuaccguaacuuagggauaaggagagcucauuagucucgaacgaguaaaaaggaagaagcauggaauauuguuguacgacuguuuaauuaaaacaaagcacuuugcaaaaagacgauaagucuaaguauugagugugauuucugcccgaugccggcugguuaacgaauuuucuaaauugaaaaaaaauuugguuucagaggaacccccgguuaauggcggccuuagcgugaggguccuaagguagcgaaaugccuuggccguuaaaugcggucuugcaugaaugauguaacgauacaacagcugucucuaugauugacucagugaaauuggaauaacugugcagauacaguuuaccucuaguuagacgagaagacccuaugcagcuuuacuguuacuaauuauugaauacgauucugaaaauuuccaguguaaaagguaaucgauaagauauaauugaaacaccuuuauuuuucuaucguauuauuaaaccuuaaauuaaggaacaauuguuagaagacaguuuaugcggggcacaggccccauaaagaguaaaugggugugucuaaaauguuugcaauuuuuuauaguauauaucaaaucaucuuuaugcuauucauagaccuuggguacaguauaaaaauuauauauguauuaauuuacauauauuuuuucuaagaaauuagguaagauuuuguuuauagagaaauuagauguaaaaaaaaaaucuuaugagggcggauccgcuucuaauauuuuuuuguaguuauuauuauaauaauaaucauguuuauuacuuaaaaagcuuaauggcuuaaucuugccuuacuguuugauuaacaacaaaucuuacagucgcguaagcggggcauaggaucacaagauacaaaaaggaaagaucuuggauuuuuggaaaagcuacgcuagggauaacaggcuaauuugcgcaagaguguacaaaaugagugcgcgguuuggcaccucggcuugacuaauccucauggaugcagaaacuauguaggguacgacuguucgucgauuaaaaaguuacaugagcuggguuaaauacgucgugagacaguaugguuucuaucuucuagagggaauuagaauauaauaaggauuaaccuuuguacgaaaggaacaugggguacuauuguuaacaguuuuauuaaccucugguuuaccuguuguuuaugugccuuagggauguuaccgucacuugaguaaauacaauagcauaagcauggcaggaaagcuaaguuagucaaaaauaagugcugaaagcauauaggcacgaaauuuaccuuaagauauuucuuaaauauacguaagaaaauauuacguuaauaggcuuaguuuguaauaaucuagagauuuuaaggaacuaaguacuaauuuuauaaaaaacugaaugauuaauauaucuuaca <<<<..<<<<<<.......<<<<<<<<<..>>>>...<<<.......<<<<<<<<<<......<<.....<<<<<<<<..<<<<<<.....>>.....<<<<<<................>>>>>>....>>>>..<<....>>..........<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<....>>....>>>>>>..<<...............<<<<<<<<....>>>>>>>>........<<<<<..[[[[>>>>>...>>.......>>>>>>>>.................<<....>>....>>.......>>>>>>>>>>.......<<<<..<<.........>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<.........>>>...<......>..<<<<.......>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<<<....>>.>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>.....<<.....>>.......>>>>>>.>..>.>>..<<<<<<....<<<<<....>>>>>..<<<<<<<...<<<<<<.<<.....<<<...<..<<<<<<.<<<<<<<<..<..<<<<<<<<<..>>>>>>>>>>.>>>>.....>>>>.....<<<<<<<<<<.....>>>>>>.>>>>>>>>.>>..>..>>.>.....>>.>>>>>>...>>>>>>>.....<<<<<<.<<<......>>>.>>>>>>....<<<......>>>...<<<<<.<<...<<<(((.....<<<<<<.....<<......<<..<<<<<<<........<<<<<<.<....<<<<.......>>>>....>........<<<......>>>..>>>>>>......>>>>>>>.>>...........)))>>...>>>>>>.>>>...>>>>>>><<<<..<<<<<<<<<<<<....>>>>>>>>>>>>...>>>>....>>>>>>..<<<<<<..<<<....<<..<<..<<...>>..>>..>>....>>>.>>>>>>........>>>>>><......<<.....<<<.<<<<<<<<<<<.....>>>>>>>>>>>.>>><<<<<...<<<<<.<<........((...<<<.<<<...<<<.<<<<<<<..>>>>>>>>>>...>>>....)).........<<<.<<..(((((..>>.>>>..............>>>..>>......<<......>>>>>>>..<<<.....>>>..>>>>>....<<<<....<<<<<<<<.<<.........<......<<.<<....<<..>>.....>>>>..<<<.<<...<<<<..>>>>....>>.>.>>.............<<<<<<<<<..<<<.........>>>..<<<<<<.......<<<<.....>>>>.......>>>>>>....<<.<<<..<<<<<<<..<<....<.......<<<<<<<.......>>>>>>>.......>....>>>>>>>..>>>>>.<<<<........>>>>.........<...........<<<<<<.....>>>>>>.....>....>>.....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<..<<<<<.<<..<<<<<<<<...<<<<<...........<<<<<<.<<<.....>>>...........>>>>>>..>>>>>.>>>>>>>>......<<<<.....>>>>....>>.>>>>>...>>>>>...<<.......>>.<<<<<<...........>>>>.>>..<<.....<.......<<<..<<<<...>>>>..>>>.>..........<<<<<<.......>>>>>>.............<<<<<<<<<......>>>>>>>>>................<<<<<<<.....<<<<.........>>>>.<<<<..<<<<.<<.<<<.<<.<<<<<..>>>>>>>>>>.>>..>>>>...<<<<<<<<<..>>>>>>>>>........>>>>......<<<.[.(((>>>...>>>>>>>...<<<<..<<<.........>>>..>>>>.<<<....>>>.>>)))]......<<<<<<.<...]]]]...>>>>>>>............>>>>..>>>>>>.......<<<<.<...<<<<<...<<.......>>...>>>>>....>>>>.>..<<<<.<<<<<...<<<<<<<<.........>>>>>..>>>..<<<<.....>>>>.......>>>>..>...>>>.>.....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.....<<<<<<...<<<<<...<<<<<...............>.>>......<<<<<..>>>>>>>.<<<<<<...<<<<...<<<<<<<<<<<<<<.<<<..>>>...<<<<...)))))..>>>>........>>>>>>>>>..>>>>>...>>>>.>>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>>...>>>.>>>....<<<.<<<<<.......>>>>>....<<<<<<<<<<<<.....<<<<<..>>>>>....>>>.>>>>>>.>>>.....>>>....>>>>>>>>.....>>>>>>>>>>. ((((..((((((.......(((((((((..))))...(((..(....((((((((((...[.(((....((((((((((.(((((..{..[.)...[.((((((...........}.]].))))))....))))..((....))..........((((((.....(......)......))))).).........((....))...(((((.....((....))....)))))...(((..............(((((((......)))))))........(((((..{{{{)))))..)))......))))))))).)...............((....))....)).).....)))))))))).....(.((((..((.........))..)))).{.(.(........).).((((((....(((((((((((((..((...........))...(......)..((((.......))))...)))))))))))))..((.(...((((((.....((((((((((.((((......){)))...(((..((((.......A)))).)))..).))))))))).(...((.....))....)..))))))....).))..((((((....(((((....)))))...(((((([.(((((((.((.....(((...(..((((((.(((((.((.....((((((........))))))..)).).....))))......((..(((.(.....).)))...)).)))).))..)..)).).....)).)))))).])))))))......((((((.(((......))).))))))....(((......)))...(((((.((...((([[[...(.((((((.....((......((..(((((((.......<((((((......(((.........)))..........(..(((......)))).))))))......))))))).))...........]]]))...))))))))))...)))))))(((((.((((((((((((....)))))))))))).).))))....))))))(.((((((..(((.....(.]((..((...))..))..).....))).))))))..).....))))))(......((.....(((.(((((((((((.....))))))))))).)))((((....((((..((.(......[[...(((.(((.(.(((.((((((....)))))))))..))))....]](........(((.((..[[[[[..)).))).(..).......).))).)))......((......)).))))..((.......))...))))....((((....((((((((.((..(....(........((.((....(.[..).....))))..(((.((..(((((..)))).<).)).).)).(...).......(((((((((.}.((.........))...((((((........(((.....)))........)))))).]..((.(((..(((((((..((....(.......(((((((.......))))))).......)....)))))))..)))))(((((........)))))........((..........((((((.....))))))..)..)....)).....)).))))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..(((((((..(((.((.....(((((.((((((..(((((..(((((.((..((((((((...(((((.(......[..(((((..(((.....)))..........].)))))).))))).))))))))......((((.....))))....)).)))))...)))))...((.......)).((((((...........)))).))..((.....(.......(((..((((...))))..))).)......(...((((((.......))))))...........).(((((((((......)))))))))................(((((((..((.((((.........)))).((((..((..(.(.(((.((.((.((..)).))))))).)...).))...(((((((((())))))))))........))))....)).((...[[[))....)))))))...((((..(((......<..)))..)))).(((....))).))]]].......((((((.(...}}}}...))))))).......>....))))..)))))))......((((.(...(((((...((.......))...)))))....)))).)..((((.(((((...((((((((.........)))))..)))..((((.....)))).......))))..)...))).).....(((((((....))).))))..a.))..))).)))))))....)((((((...(((((...((((......(....)......))......(((((..))))))).((((((...((((...((((((((((((((.(((()))).(.((((...]]]]]..)))).....)>.)))))))))..)))))...)))).))))))..(((....(((((....>......)))))....))).)))))...))).)))....(((.(((((.......)))))....((((((((((((.....((((....))))....))).)))))).))).....)))....)))))))).....)))))))))). The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state; 23S rRNA 6ywe aa 1435 2.99 RF00177,RF01959,RF01960 URS00021ED984_5141 33056988 0003735 0005840 5141 auagaugaguuuggugauggcucugauugaacacuguccaaauacuugacacaugcuaaucgaacguuuaauuuuggcucuuaauuaaaagugguguacaggugaguauaauauuuuuucgcuuaacuuaaagugaaggcaaauccuucauauugcaaaaggauaucuauauccgcuuuaagaggaugagaaaaguuucagagauagguaguuguuaaggucauggcuuaacaagccaauaauucucuuagucgaagcugaaaaggcugaucgaccacauugggaaugaaaaaaucccaaggcaaauagguacagcagugaggaaucuuggucaaugggcccacgccugaacugguaacuuggaggaaugagacgucgauuuaucgaguaaaauucuguauacauauugauaaugacaauauguacauuugucuugacuaauuacgugccagcagucgcggcaauacguaagagacuaguguuaaucaucauaaauagguuuaaaggguacucagacggaaaaauucgcccaaauauaggggacaauuuuucuagaguuuuauguaagaaggucguacucuagaguggagagauaaaauucugugauaccuaggggacggguaaaggcgaaggcaaucuuuuauguaaaaacugacgucgaaggacgaaggcaaagggaacaaaaaggauuagauaccccaguagucuuugcagacaauuaugaaugccauagguuagauuuuuaauuuagucuauaaaugaaaguguaagcauuucaccucaagaguaaggcggcaacgcaggaacugaaaucacuagaccguuucugacaccagcaaugaaguauguuauuuaauucggugacccacgaaaaaccuuaccacaauuugaauauuaauuauuaauacaaguguugcacggcugucuucaguugauguugcgaaacugugguucguuccauggaauuaacguaaacccuugcuuuauuuguaaauauuauaaagcaguucaccuuuauauaggaaaugauaaaagggaucaagacaagucaucauggccuaaauauugugggcuauagacgugccacauuuuccuaaacaaagagaugcaaaaaugugaauuuuagcuaaucucaaaaaauaggauaaaaauauacaaggauuguagucugaaauucgacugcaugaauaagaaauugcuaguaaucgugaaucaccaugacacggugaauauucccucggauugguacuaaccacucgucacaugcugaaaggagugcgugcaauaaguuugcuuuucuguuauaaguaaguagacauauagguuuagauguuauaauaggauccuucguaugcgcggcucugauuaguguuaagucgaaauacgguucguguaguggaaguugcacgggacuuaucaauguugaacaauacga ......((((..<<<<<<.))))<<<<<.<<<<<..<<<<<.<<.....<<<.<<<..<<<..<<.<<<<<<<..<<.>>..>>>>>>>.>>>>>......<<.........<<<<<<<..<<...<<<<<<<<<<<<<.....>>>>>...........<<<<<<..>>>>>>>>>>>>>>.>>...(>>>>>>>...<<<<<..<<<..<<<<<<<<....)..>>>>>>>>>>>......>>>>>..<<<<.<<<<.....>>>>...>>>>.>>.<<<<<...........>>>>>.<<......>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>..>>>>>.<<<<......<<<<....>>>>.....>>>>....<<<<<<<<<.......>>>>>>>>>.....<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<<..<..<<<.<<<<<<<<.<<<<.......>>>..>>>>>>>>>...<<<<<......<<<<<<<.<..<<<<<<.<<<..<<<......>>>.....>>>>>>>>>..>........<<....>>.>>>>>>>......>>>>>...>>>...>.>>....<<<<<<...<<.....<<.........>>.....>>>>>>>>..........<<<<<<.<<<<<<<<<<<<...>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<........<<<....>>>......>>..>>>>>><<<<<...<<<<<....<<<<<<...<<<<<<<<<......<<........>>..........<<<<<<<.....<<<<<<<.>>>>>>>..<<.<<...<.<<<<<<<....<<<<<<<<<....>>>.<<<<......>>>>...>>>>>>.....<<<<<<<<<<<<...........>>>>>>>>..<<.<<<......>>>....>>....>>>>.....>>>.>>>...>.>.>>>>....>>>>>>>...>>.>>>>>>>.......<<<<<......<<<..<<..<<<<....>>>>..>>....>>>......>>>>>............<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<...........>>>>>>..........>>>>>..>>>.>>....<.<<<.<..<<<<<<<..<<<<<.<<<<<<....<.......<<<<<<<<<<<.....<<<<<......>>>>>....>>>>>>>>>>>.....>...>>>>>>>>>>>..>>>>>>>...>.>>>..>.....<<<<<<<<<....>>>>>>>>>......................... ......[[[[..(((((..]]]].((((.(((((..(((((.(((....(((.(((..(((..((.(((((((..(...)..))))))).)))))......(((......(.((((((((.((...(((((((((((((.....)))))...........((((((..)))))))))))))).))..)[))))))))..(((((..(((..((((((((....]..)))))))))))......)))))..((((.((((.....))))...))))))).(((((...........))))).((......))...)))))).).....(.(((...(((((....)))).))))).))..))))).((((......(((((..))))).....))))....(((((((((.......))))))))).....((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((.....(((.((((((((.((((.......)))..)))))))))..((((((.......((((((((..((((((.((...((........))......))))))))..)).......((....)).)))))).......)))))..)))).....))....((((((...((.....((.........)).....))))))))......{...((((((.((((((((((((...))))))))))))..((..]]))....)))))))))).((........(((....)))......))...)))))(((((...(((((.(...(((((...(((((((((......((........))..........(((((((..(..(((((((.)))))))).((.(((....(((((((....(((((((((....))).((((......))))...)))))).....(((.((((((((...........))))))))..((.(((......)))....)).....))).....))).)))...)..)))))....)))))))...)).)))))))..(.....((((......(((..((...(((....)))...))....)))......)))).............(....(((((((........)))))))....)..)..))))).....((((((...........))))))......)...)))))..))).))..(.(..((.(..(((((((..(((((.((((((....(...(...(((((((((((.....(((((......)))))....)))))))))))..)..)...)))))))))))..)))))))...).))...)..)..(((((((((....)))))))))}......(...)............. The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state; 16S rRNA 6yws A 2820 2.74 RF02541,RF02540 URS00021ED918_367110 33056988 0003735 0005840 367110 guaauggauauaaagcuuauguuuauauauauauauaaguauauaaagagacuacuaccaauagcuacacuauguauuaaggagaguauaacuuaauuuauguuuaugauagagguuaucaacauaugaacucuuagagaaauuacuuaauaaacgaagugaauugaaauaucuuauuaacuucaggaaaagaaaucaaacgagauucuaugauuagugugaacgaaaauagagcagccuauuaaaauaaguaaaauggcuuuaaagcuguuugaauauuguggggaaccuuccucaaaggcuaaauauaauacaugaguuacagagaaaaguaccgugagggaaagcuuugaaauaguaguuuuauaagcagcucaagcaauaagaaagcgagagcguaccuuuugcauaaugggucaccaaguuaauuuuagaugcgagcgaauuagaugugcauaguuaaaccgaucauuaaaauaaugaauagugucuaaaguuagacccgaagccuggugaucuuacuauagucaggacuauaaagguccgaacggguuaucguugcaaagauauccgaagaacuaugguaagcgagugaaagacaacacugacuaggauagcugguuuucugcgaaaccuauaauaguaggcaauuuaaguaacaucuuaguagguacagaacuuaaucucagacaagauguagauuuucauaccuagguaugaaaugcauuuuuuuuuguauacaucgggggauauuuuaucggugaguauguagacucggaaugacaaagaugaaucuugaauaaucagacauagaaugauaagguuguaugucaaaagggaaacagcccagaacaagaguuaagguuccaaaauuauuauuaagugaaauaaagaaaguuuuuauauaagucgacaagaagaugggcuuggaagcagccauaauuuaaagaucucguaacagagcacuuguuaaaucuuaaaagcaucgaaaauuuaacggaucuaaauaauauaccgaaaccuuguccauauguaacauuaguaauaauauuaauguuauuugaugggguagcagaacguugagugaaucuuagauuuuuuuuuuauaacuaaauauagaugauaacucaagugagaauggugacaugaguaacaaaaaagaguuuaagguaccuaaaagguaucuuagagucucgccuaaagcuuauggcuacgucaaguaacggccucuaaguuuauaaucugaagauuaugacgaugagaaaacuuugguaccaacauuuaaaagugaaaauugugcaggaaggauaaaccguaccuagaaucugaaacaaguaagcuaguagagaauacgaaggcgugaaugagauaacaaucauaaaggaacucggcaaacuaacuaccguaacuuagggauaaggagagcucauuagucucgaacgaguaaaaaggaagaagcauggaauauuguuguacgacuguuuaauuaaaacaaagcacuuugcaaaaagacgauaagucuaaguauugagugugauuucugcccgaugccggcugguuaacgaauuuucuaaauugaaaaaaaauuugguuucagaggaacccccgguuaauggcggccgguccuaagguagcgaaaugccuuggccguuaaaugcggucuugcaugaaugauguaacgauacaacagcugucucuaugauugacucagugaaauuggaauaacugugcagauacaguuuaccucuaguuagacgagaagacccuaugcagcuuuacuguuacuaauuauugaauacgauucugaaaauuuccaguguaaaagguaaucgauaagauauaauugaaacaccuuuauuuuucuaucguauuauuaaaccuuaaauuaaggaacaauuguuagaagacaguuuaugcggggcacaggccccauaaagaguaaaugggugugucuaaaauguuugcaauuuuuuauaguauauaucaaaucaucuuuaugcuauucauagaccuuggguacaguauaaaaauuauauauguauuaauuuacauauauuuuuucuaagaaauuagguaagauuuuguuuauagagaaauuagauguaaaaaaaaaaucuuaugagggcggauccgcuucuaauauuuuuuuguaguuauuauuauaauaauaaucauguuuauuacuuaaaaagcuuaauggcuuaaucuugccuuacuguuugauuaacaacaaaucuuacagucgcguaagcggggcauaggaucacaagauacaaaaaggaaagaucuuggauuuuuggaaaagcuacgcuagggauaacaggcuaauuugcgcaagaguguacaaaaugagugcgcgguuuggcaccucggcuugacuaauccucauggaugcagaaacuauguaggguacgacuguucgucgauuaaaaaguuacaugagcuggguuaaauacgucgugagacaguaugguuucuaucuucuagagggaauuagaauauaauaaggauuaaccuuuguacgaaaggaacaugggguacuauuguuaacaguuuuauuaaccucugguuuaccuguuguuuaugugccuuagggauguuaccgucacuugaguaaauacaauagcauaagcauggcaggaaagcuaaguuagucaaaaauaagugcugaaagcauauaggcacgaaauuuaccuuaagauauuucuuaaauauacguaagaaaauauuacguuaauaggcuuaguuuguaauaaucuagagauuuuaaggaacuaaguacuaauuuuauaaaaaacugaaugauuaauauaucuuaca <<<<..<<<<<<.......<<<<<<<<<..>>>>...<<<.......<<<<<<<<<<......((.....<<<<<<<<<.<<<<<<.....>>.....<<<<<<................>>>>>>....>>>>..<<....>>..........<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<....>>....>>>>>>..((...............<<<<<<<<....>>>>>>>>........<<<<<..<<<<>>>>>...))......>>>>>>>>>.................<<....>>....)).......>>>>>>>>>>.......<<<<..<<.........>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<.........>>>...<......>..<<<<<.....>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<....<<<<<<<<<<..<<<<<....>>.>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>....<<.....>>.......>>>>>>.>..>.>>..<<<<<<....<<<<<....>>>>>..<<<<<<<...<<<<<<.<<.....<<<...<..<<<<<<.<<<<<<<<..<..<<<<<<<<<..>>>>>>>>>>.>>>>.....>>>>.....<<<<.<<<..>>>..>>>>>>>>.>>..>..>>.>.....>>.>>>>>>...>>>>>>>.....<<<<<<.<<<......>>>.>>>>>>....<<<......>>>...<<<<<.<<...<<<(((.....<<<<<<.....<<......<<..<<<<<<<........<<<<<<.<....<<<<.......>>>>....>........<<<......>>>..>>>>>>......>>>>>>>.>>...........)))>>...>>>>>>.>>>...>>>>>>><<<<..<<<<<<<<<<<<....>>>>>>>>>>>>...>>>>....>>>>>>..<<<<<<..<<<....<<..<<..<<...>>..>>..>>....>>>.>>>>>>........>>>>>><......<<.....<<<.<<<<<<<<<<<.....>>>>>>>>>>>.>>><<<<<...<<<<<.<<........((...<<<.<<<...<<<.<<<<<<<..>>>>>>>>>>...>>>....)).........<<<.<<..(((((..>>.>>>..............>>>..>>......<<......>>>>>>>..<<<.....>>>..>>>>>....<<<<....<<<<<<<<.<<................<<.<<....<<..>>.....>>>>..<<<.<<..<<<<<..>>>>..>.>>.>.>>.............<<<<<<<<<..<<<.........>>>..<<<<<<.......<<<<.....>>>>.......>>>>>>....<<.<<<..<<<<<<<..<<....<.......<<<<<<<.......>>>>>>>.......>....>>>>>>>..>>>>><<<..>>>........<...........<<<<<<.....>>>>>>.....>....>>.....>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<..<<<.[[......<<<<.[[<<<<..<<<<<..<<<<<.<<..<<<<<<<<...<<<<<...........<<<<<<.<<<.....>>>...........>>>>>>..>>>>>.>>>>>>>>......<<<<.....>>>>....>>.>>>>>...>>>>>...<<.......>>.<<<<<<...........>>>>.>>..<<.....<.......<<<..<<<<...>>>>..>>>.>..........<<<<<<.......>>>>>>.............<<<<<<<<<......>>>>>>>>>................<<<<<<<.....<<<<.........>>>>.<<<<..<<<<<<<.<<<.<<.<<<<<..>>>>>>>>>>.>>>.>>>>...<<<<<<<<<..>>>>>>>>>........>>>>......<<<...(((>>>...>>>>>>>...<<<<..<<<.........>>>..>>>>.<<<....>>>.>>))).......<<<<<<.(...>>>>...)>>>>>>............>>>>..]]>>>>.......<<<<.<...<<<<<...<.........>...>>>>>....>>>>.>..<<<<.<<<<<...<<<<<<<<.........>>>>>..>>>..<<<<.....>>>>.......>>>>..>...>>>.>.....<<<<<<<....>>>.>>>>....]]..>>>.>>>>>>>.....<<<<<<...<<<<<...<<<<<...............>.>>......<<<<<..>>>>>>>.<<<<<<...<<<<...<<<<<<<<<<<<<<.<<<..>>>...<<<<...)))))..>>>>........>>>>>>>>>..>>>>>...>>>>.>>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>>...>>>.>>>....<<<.<<<<<.......>>>>>....<<<<<<<<<<<<.....<<<<....>>>>....>>>.>>>>>>.>>>.....>>>....>>>>>>>>.....>>>>>>>>>>. ((((..((((((.......(((((((((..))))...(((..(....((((((((((...[.(((....((((((((((.(((((..{..[.)...[.((((((...........}.]].))))))....))))..((....))..........((((((.....(......)......))))).).........((....))...(((((.....((....))....)))))...(((..............(((((((......)))))))........(((((..{{{{)))))..)))......))))))))).)...............((....))....)).).....)))))))))).....(.((((..((.........))..)))).{.(.(........).).((((((....(((((((((((((..((...........))...(......)..((((.......))))...)))))))))))))..((.(...((((((.....((((((((((.((((......){)))...(((..((((.......A)))).)))..).))))))))).(...((.....))....)..))))))....).))..((((((....(((((....)))))...(((((([.(((((((.((.....(((...(..((((((.(((((((...(..((((..(((())))..)))))..))).....))))......((..(((..)))...)).)))).))..)..)).).....)).)))))).])))))))......((((((.(((......))).))))))....(((......)))...(((((.((...((([[[...(.((((((.....((......((..(((((((.......<((((((......(((.........)))..........(..(((......)))).))))))......))))))).))...........]]]))...))))))))))...)))))))(((((.((((((((((((....)))))))))))).).))))....))))))(.((((((..(((.....(.]((..((...))..))..).....))).))))))..).....))))))(......((.....(((.(((((((((((.....))))))))))).)))((((....((((..((.(......[[...(((.(((.(.(((.((((((....)))))))))..))))....]](........(((.((..[[[[[..)).))).(..).......).))).)))......((......)).))))..((.......))...))))....((((....((((((((.((..(....(........((.((....(.[..).....))))..(((.((..(((((..)))).<).)).).)).(...).......(((((((((.}.((.........))...((((((........(((.....)))........)))))).]..((.(((..(((((((..((....(.......(((((((.......))))))).......)....)))))))..)))))(((())))........((..........((((((.....))))))..)..)....)).....)).))))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..(((((((..(((.((.....(((((.((((((..(((((..(((((.((..((((((((...(((.(.(......[..(((((..(((.....)))..........].)))))).).))).))))))))......((((.....))))....)).)))))...)))))...((.......)).((((((...........)))).))(.((.....(.......(((..((((...))))..))).)......(...((((((.......))))))...........).(((((((((......)))))))))................(((((((..((.((((.........)))).((((..((.((((.(((.((.(((((..)))))))))).))).).))...(((((((((()))))))))).(...)..))))....)).((...[[[))....)))))))...((((..(((......<..)))..)))).(((....))).))]]].......((((((.(...}}}}...)))))))......)>....))))..)))))))......((((.(...(((((...((.......))...)))))....)))).)..((((.(((((...((((((((.........)))))..)))..((((.....)))).......))))..)...))).).....(((((((....))).))))..a.))..))).)))))))....)((((((...(((((...((((......(....)......))......(((((..))))))).((((((...((((...((((((((((((((.(((()))).(.((((...]]]]]..)))).....)>.)))))))))..)))))...)))).))))))..(((....(((((....>......)))))....))).)))))...))).)))....(((.(((((.......)))))....((((((((((((.....((((....))))....))).)))))).))).....)))....)))))))).....)))))))))). The structure of the large subunit of the mitoribosome from Neurospora crassa; RNA (2820-MER) 6ywv A 2529 3.03 RF02541,RF02540 URS00021ED918_367110 33056988 0003735 0005840 367110 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<<<<..<<<<<<.......<<<<<<<<<..>>>>...<<<.......<<<<<<<<<<......<<.....<<<<<<<<<.<<<<<<.....>>.....<<<<<<................>>>>>>....>>>>..<<....>>..........<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<....>>....>>>>>>..<<...............<<<<<<<<....>>>>>>>>........<<<<<..[[[[>>>>>...>>......>>>>>>>>>.................<<....>>....>>.......>>>>>>>>>>.......<<<<..<<.........>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<.........>>>...<......>..<<<<<.....>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<....<<<<<<<<<<..<<<<<....>>.>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>....<<.....>>.......>>>>>>.>..>.>>..<<<<<<....<<<<<....>>>>>..<<<<<<<...<<<<<<.<<.....<<<......<<<<<<.<<<<<<<.<.<..<<<<<<<<<..>>>>>>>>>>>.>>>.....>>>>.....<<<<<..>.>>>>>>>>.>>.....>>.>.....>>.>>>>>>...>>>>>>>.....<<<<<<.<<<......>>>.>>>>>>....<<<......>>>...<<<<<.<<...<<<(((.....<<<<<<.....<<......<<..<<<<<<<........<<<<<<.<....<<<<.......>>>>....>........<<<......>>>..>>>>>>......>>>>>>>.>>...........)))>>...>>>>>>.>>>...>>>>>>><<<<..<<<<<<<<<<<<....>>>>>>>>>>>>...>>>>....>>>>>>..<<<<<<..<<<....<<..<<..<<...>>..>>..>>....>>>.>>>>>>........>>>>>><......<<.....<<<.<<<<<<<<<<<.....>>>>>>>>>>>.>>><<<<<...<<<<<.<<........((...<<<.<<<...<<<.<<<<<<<..>>>>>>>>>>...>>>....)).........<<<.<<..(((((..>>.>>>..............>>>..>>......<<......>>>>>>>..<<<.....>>>..>>>>>....<<<<....<<<<<<<<.<<.................<<....<<..>>.....>>..............<<<<<<<<<..<<<.........>>>..<<<<<<.......<<<<.....>>>>.......>>>>>>....<.>.....>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<..<<<.<<...<<<<<<<.<<<<<<..<<<<<..<<<<<.<<..<<<<<<<.>>>>>>>......<<<<.....>>>>....>>.>>>>>...>>>>>....<<<<<<...........>>>>.>>..<<.....<.......<<<..<<<<...>>>>..>>>.>..........<<<<<..>>>>>.......................<<<<<<<.....<<<<.........>>>>.<<<<..<<<<<<<.<<<.<<.<<<<<..>>>>>>>>>>.>>>.>>>>...<<<<<<<<<..>>>>>>>>>........>>>>......<<<...(((>>>...>>>>>>>...<<<<..<<<.........>>>..>>>>.<<<....>>>.>>))).......<<<<<<.<...]]]]...>>>>>>>............>>>>..>>>>>>>......<<<<.....<<<<<...<.........>...>>>>>.....>>>.>.>>......<<<..<<<<...<<<<<<<<.........>>>>>..>>>..<<<<.....>>>>.......>>>>......>>>.......<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.....<<<<<<...<<<<<...<<<<..................>>......<<<<<<<<>>>>>>>>>>.<<<<<<...<<<<...<<<<<<<<<<<<<<.<<<..>>>...<<<<...)))))..>>>>........>>>>>>>>>..>>>>>...>>>>.>>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>>...>>>.>>>....<<<.<<<<<.......>>>>>....<<<<<<<<<<<<....>>.>>>>>>>.>>>.....>>>....>>>>>>>>.....>>>>>>>>>>. ((((..((((((.......(((((((((..))))...(((..(....((((((((((...[.(((....((((((((((.(((((..{..[.)...[.((((((...........}.]].))))))....))))..((....))..........((((((.....(......)......))))).).........((....))...(((((.....((....))....)))))...(((..............(((((((......)))))))........(((((..{{{{)))))..)))......))))))))).)...............((....))....)).).....)))))))))).....(.((((..((.........))..)))).{.(.(........).).((((((....(((((((((((((..((...........))...(......)..((((.......))))...)))))))))))))..((.(...((((((.....((((((((((.((((......){)))...(((..((((.......A)))).)))..).))))))))).(...((.....))....)..))))))....).))..((((((....(((((....)))))...(((((([.(((((((.((.....(((...(..((((((.(((((((...(...((((((......)))))).)..))).....))))......((..()...)).)))).))..)..)).).....)).)))))).])))))))......((((((.(((......))).))))))....(((......)))...(((((.((...((([[[...(.((((((.....((......((..(((((((.......<((((((......(((.........)))..........(..(((......)))).))))))......))))))).))...........]]]))...))))))))))...)))))))(((((.((((((((((((....)))))))))))).).))))....))))))(.((((((..(((.....(.]((..((...))..))..).....))).))))))..).....))))))(......((.....(((.(((((((((((.....))))))))))).)))((((....((((..((.(......[[...(((.(((.(.(((.((((((....)))))))))..))))....]](........(((.((..[[[[[..)).))).(..).......).))).)))......((......)).))))..((.......))...))))....((((....((((((((.((..(....(.........((....(.[..).....))..............(((((((((.}.((.........))...((((((........(((.....)))........)))))).](.(.).)...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..(((((((..(((.((...(((((((.((((((..(((((..(((((.((..(((((((.)))))))......((((.....))))....)).)))))...)))))....((((((...........)))).))..((.....(.......(((..((((...))))..))).)......(...(((((())))))...........)...........(((((((..((.((((.........)))).((((..((..(((.(((.((.(((((..)))))))))).))..).))...(((((((((()))))))))).(...)..))))....)).((...[[[))....)))))))...((((..(((......<..)))..)))).(((....))).))]]].......((((((.(...}}}}...))))))).......>....))))..)))))))......((((.(...(((((...((.......))...)))))....)))).).)).....((((.(((((...((((((((.........)))))..)))..((((.....)))).......))))..)...))).).....(((((((....))).))))..a.))..))).)))))))....)((((((...(((((...((((......(....)......))......(((((((()))))))))).((((((...((((...((((((((((((((.(((()))).(.((((...]]]]]..)))).....)..)))))))))..)))))...)))).))))))..(((....(((((....>......)))))....))).)))))...))).)))....(((.(((((.......)))))....((((((((((((....))).)))))).))).....)))....)))))))).....)))))))))). The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa; 23 S rRNA 6ywx A 2838 3.1 RF02541,RF02540 URS00021ED918_367110 33056988 0003735 0005840 367110 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<<<<..<<<<<<.......<<<<<<<<<..>>>>...<<<.......<<<<<<<<<<......<<.....<<<<<<<<..<<<<<<.....>>.....<<<<<<................>>>>>>....>>>>..<<....>>..........<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<....>>....>>>>>>..<<...............<<<<<<<<....>>>>>>>>........<<<<<..[[[[>>>>>...>>.......>>>>>>>>.................<<....>>....>>.......>>>>>>>>>>.......<<<<..<<.........>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<.........>>>...<......>..<<<<<.....>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<<<....>>.>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>.....<<.....>>.......>>>>>>.>..>.>>..<<<<<<....<<<<<....>>>>>..<<<<<<<...<<<<<<.<<.....<<<...<..<<<<<<.<<<<<<<<..<..<<<<<<<<<..>>>>>>>>>>.>>>>.....>>>>.....<<<<.<<<<<.....>>>>>..>>>>>>>>.>>..>..>>.>.....>>.>>>>>>...>>>>>>>.....<<<<<<.<<<......>>>.>>>>>>....<<<......>>>...<<<<<.<<...<<<(((.....<<<<<<.....<<......<<..<<<<<<<........<<<<<<.<....<<<<.......>>>>....>........<<<......>>>..>>>>>>......>>>>>>>.>>...........)))>>...>>>>>>.>>>...>>>>>>><<<<..<<<<<<<<<<<<....>>>>>>>>>>>>...>>>>....>>>>>>..<<<<<<..<<<....<<..<<..<<...>>..>>..>>....>>>.>>>>>>........>>>>>><......<<.....<<<.<<<<<<<<<<<.....>>>>>>>>>>>.>>><<<<<...<<<<<.<<........((...<<<.<<<...<<<.<<<<<<<..>>>>>>>>>>...>>>....)).........<<<.<<..(((((..>>.>>>..............>>>..>>......<<......>>>>>>>..<<<.....>>>..>>>>>....<<<<....<<<<<<<<.<<.........<......<<.<<....<<..>>.....>>>>..<<<.<<...<<<<..>>>>....>>.>.>>.............<<<<<<<<<..<<<.........>>>..<<<<<<.......<<<<.....>>>>.......>>>>>>....<<.<<<..<<<<<<<..<<....<.......<<<<<<<.......>>>>>>>.......>....>>>>>>>..>>>>><<<<<........>>>>>........<...........<<<<<<.....>>>>>>.....>....>>.....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<..<<<<<.<<..<<<<<<<<...<<<<<...........<<<<<<.<<<.....>>>...........>>>>>>..>>>>>.>>>>>>>>......<<<<.....>>>>....>>.>>>>>...>>>>>...<<.......>>.<<<<<<...........>>>>.>>..<<.....<.......<<<..<<<<...>>>>..>>>.>..........<<<<<<.......>>>>>>.............<<<<<<<<<......>>>>>>>>>................<<<<<<<.....<<<<.........>>>>.<<<<..<<<<<<<.<<<.<..<<<<<..>>>>>.>>>>.>>>.>>>>...<<<<<<<<<..>>>>>>>>>........>>>>......<<<...(((>>>...>>>>>>>...<<<<..<<<.........>>>..>>>>.<<<....>>>.>>))).......<<<<<<.<...]]]]...>>>>>>>............>>>>..>>>>>>.......<<<<.<...<<<<<...<.........>...>>>>>....>>>>.>...<<<<.<<<<<...<<<<<<<<.........>>>>>..>>>..<<<<.....>>>>.......>>>>..>...>>>.>.....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.....<<<<<<...<<<<<...<<<<<...............>.>>......<<<<<..>>>>>>>.<<<<<<...<<<<...<<<<<<<<<<<<<<.<<<..>>>...<<<<...)))))..>>>>........>>>>>>>>>..>>>>>...>>>>.>>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>>...>>>.>>>....<<<.<<<<<.......>>>>>....<<<<<<<<<<<<.....<<<<....>>>>....>>.>>>>>>>.>>>.....>>>....>>>>>>>>.....>>>>>>>>>>. ((((..((((((.......(((((((((..))))...(((..(....((((((((((...[.(((....((((((((((.(((((..{..[.)...[.((((((...........}.]].))))))....))))..((....))..........((((((.....(......)......))))).).........((....))...(((((.....((....))....)))))...(((..............((((.((......)).))))........(((((..{{{{)))))..)))......))))))))).)...............((....))....)).).....)))))))))).....(.((((..((.........))..)))).{.(.(........).).((((((..(.(((((((((((((..((...........))...(......)..((((.......))))...)))))))))))))..((.(...((((((.....((((((((((.((((......){)))...(((..((((.......A)))).)))..).))))))))).(...((.....))....)..))))))....).))).((((((....(((((....)))))...(((((([.(((((((.((.....(((...(..((((((.((((((((..(..((((((((.().))))))))).)))).....))))......((..(.(((.....))).)...)).)))).))..)..)).).....)).)))))).])))))))......((((((.(((......))).))))))....(((......)))...(((((.((...((([[[...(.((((((.....((......((..(((((((.......<((((((......(((.........)))..........(..(((......)))).))))))......))))))).))...........]]]))...))))))))))...)))))))(((((.((((((((((((....)))))))))))).).))))....))))))(.((((((..(((.....(.]((..((...))..))..).....))).))))))..).....))))))(......((.....(((.(((((((((((.....))))))))))).)))((((....((((..((.(......[[...(((.(((.(.(((.((((((....)))))))))..))))....]](........(((.((..[[[[[..)).))).(..).......).))).)))......((......)).))))..((.......))...))))....((((....((((((((.((..(....(........((.((....(.[..).....))))..(((.((..(((((..)))).<).)).).)).(...).......(((((((((.}.((.........))...((((((........(((.....)))........)))))).]..((.(((..(((((((..((....(.......(((((((.......))))))).......)....)))))))..)))))(((((........)))))........((..........((((((.....))))))..)..)....)).....)).))))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..(((((((..(((.((......((((.((((((..(((((..(((((.((..((((((((...(((((.(......[..(((((..(((.....)))..........].)))))).))))).))))))))......((((.....))))....)).)))))...)))))...((.......)).((((((...........)))).))..((.....(.......(((..((((...))))..))).)......(...((((((.......))))))...........)...(..(.(........).)..)..................(((((((..((.((((.........)))).((((..(((((((.(((.((.((.((..)).))))))).))).))))...(((((((((())))))))))........))))....)).((...[[[))....)))))))...((((..(((......<..)))..)))).(((....))).))]]].......((((((.(...}}}}...))))))).......>....))))..)))))).......((((.(...(((((...((.......))...)))))....)))).)...((((.(((((...((((((((.........)))))..)))..((((.....)))).......))))..)...))).).....(((((((....))).))))..a.))..))).)))))))....)((((((...(((((...((((......(....)......))......(((((..))))))).((((((...((((...((((((((((((((.(((()))).(.((((...]]]]]..)))).....)>.)))))))))..)))))...)))).))))))..(((....(((((....>......)))))....))).)))))...))).)))....(((.(((((.......)))))....((((((((((((.....((((....))))....))).)))))).))).....)))....)))))))).....)))))))))). The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site; 23S rRNA 6ywx aa 1435 3.1 RF00177,RF01959,RF01960 URS00021ED984_367110 33056988 0003735 0005840 367110 auagaugaguuuggugauggcucugauugaacacuguccaaauacuugacacaugcuaaucgaacguuuaauuuuggcucuuaauuaaaagugguguacaggugaguauaauauuuuuucgcuuaacuuaaagugaaggcaaauccuucauauugcaaaaggauaucuauauccgcuuuaagaggaugagaaaaguuucagagauagguaguuguuaaggucauggcuuaacaagccaauaauucucuuagucgaagcugaaaaggcugaucgaccacauugggaaugaaaaaaucccaaggcaaauagguacagcagugaggaaucuuggucaaugggcccacgccugaacugguaacuuggaggaaugagacgucgauuuaucgaguaaaauucuguauacauauugauaaugacaauauguacauuugucuugacuaauuacgugccagcagucgcggcaauacguaagagacuaguguuaaucaucauaaauagguuuaaaggguacucagacggaaaaauucgcccaaauauaggggacaauuuuucuagaguuuuauguaagaaggucguacucuagaguggagagauaaaauucugugauaccuaggggacggguaaaggcgaaggcaaucuuuuauguaaaaacugacgucgaaggacgaaggcaaagggaacaaaaaggauuagauaccccaguagucuuugcagacaauuaugaaugccauagguuagauuuuuaauuuagucuauaaaugaaaguguaagcauuucaccucaagaguaaggcggcaacgcaggaacugaaaucacuagaccguuucugacaccagcaaugaaguauguuauuuaauucggugacccacgaaaaaccuuaccacaauuugaauauuaauuauuaauacaaguguugcacggcugucuucaguugauguugcgaaacugugguucguuccauggaauuaacguaaacccuugcuuuauuuguaaauauuauaaagcaguucaccuuuauauaggaaaugauaaaagggaucaagacaagucaucauggccuaaauauugugggcuauagacgugccacauuuuccuaaacaaagagaugcaaaaaugugaauuuuagcuaaucucaaaaaauaggauaaaaauauacaaggauuguagucugaaauucgacugcaugaauaagaaauugcuaguaaucgugaaucaccaugacacggugaauauucccucggauugguacuaaccacucgucacaugcugaaaggagugcgugcaauaaguuugcuuuucuguuauaaguaaguagacauauagguuuagauguuauaauaggauccuucguaugcgcggcucugauuaguguuaagucgaaauacgguucguguaguggaaguugcacgggacuuaucaauguugaacaauacga ......((((..<<<<<<.))))<<<<<.<<<<<..<<<<<.<<.....<<<.<<<..<<<..<<.<<<<<<<..<<.>>..>>>>>>>.>>>>>......<<.........<<<<<<<..<<...<<<<<<<<<<<<<.....>>>>>...........<<<<<<..>>>>>>>>>>>>>>.>>...(>>>>>>>...<<<<<..<<<..<<<<<<<<....)..>>>>>>>>>>>......>>>>>..<<<<.<<<<.....>>>>...>>>>.>>.<<<<<...........>>>>>.<<......>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>..>>>>>.<<<<......<<<<....>>>>.....>>>>....<<<<<<<<<.......>>>>>>>>>.....<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<<..<..<<<.<<<<<<<<.<<<<.......>>>..>>>>>>>>>...<<<<<......<<<<<<<.<..<<<<<<.<<<..<<<......>>>.....>>>>>>>>>..>........<<....>>.>>>>>>>......>>>>>...>>>...>.>>....<<<<<<...<<.....<<.........>>.....>>>>>>>>..........<<<<<<.<<<<<<<<<<<<...>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<........<<<....>>>......>>..>>>>>><<<<<...<<<<<....<<<<<<...<<<<<<<<<......<<........>>..........<<<<<<<.....<<<<<<<.>>>>>>>..<<.<<...<.<<<<<<<....<<<<<<<<<....>>>.<<<<......>>>>...>>>>>>.....<<<<<<<<<<<.............>>>>>>>..<<.<<<......>>>....>>....>>>>.....>>>.>>>...>.>.>>>>....>>>>>>>...>>.>>>>>>>.......<<<<<......<<<..<<..<<<<....>>>>..>>....>>>......>>>>>............<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<...........>>>>>>..........>>>>>..>>>.>>....<.<<<.<..<<<<<<<..<<<<<.<<<<<<....<.......<<<<<<<<<<<.....<<<<<......>>>>>....>>>>>>>>>>>.....>...>>>>>>>>>>>..>>>>>>>...>.>>>..>.....<<<<<<<<<....>>>>>>>>>......................... ......[[[[..(((((..]]]].((((.(((((..(((((.(((....(((.(((..(((..((.(((((((..(...)..))))))).)))))......(((......(.((((((((.((...(((((((((((((.....)))))...........((((((..)))))))))))))).))..)[))))))))..(((((..(((..((((((((....]..)))))))))))......)))))..((((.((((.....))))...))))))).((((((.........)))))).((......))...)))))).).....(.(((...(((((....)))).))))).))..))))).((((......((((....)))).....))))....(((((((((.......))))))))).....((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((.....(((.((((((((.((((.......)))..)))))))))..((((((.......((((((((..((((((.((...((........))......))))))))..)).......((....)).)))))).......)))))..)))).....))....((((((...((.....((.........)).....))))))))......{...((((((.((((((((((((...))))))))))))..((..]]))....)))))))))).((........(((....)))......))...)))))(((((...(((((.(...(((((...(((((((((......((........))..........(((((((..(..(((((((.)))))))).((.(((....(((((((....(((((((((....))).((((......))))...)))))).....(((.((((((((...........))))))))..((.(((......)))....)).....))).....))).)))...)..)))))....)))))))...)).)))))))..(....(((((......(((..((...(((....)))...))....)))......)))))............(....(((((((........)))))))....)..)..))))).....((((((...........))))))......)...)))))..))).))..(.(..((.(..(((((((..(((((.((((((....(...(...(((((((((((.....(((((......)))))....)))))))))))..)..)...)))))))))))..)))))))...).))...)..)..(((((((((....)))))))))}......(...)............. The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site; 16S rRNA 6ywy A 2843 3.05 RF02541,RF02540 URS00021ED918_5141 33056988 0003735 0005840 5141 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<<<<..<<<<<<.......<<<<<<<<<..>>>>...<<<.......<<<<<<<<<<......((.....<<<<<<<<<.<<<<<<.....>>.....<<<<<<................>>>>>>....>>>>..<<....>>..........<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<....>>....>>>>>>..((...............<<<<<<<<....>>>>>>>>........<<<<<..<<<<>>>>>...))......>>>>>>>>>.................<<....>>....)).......>>>>>>>>>>.......<<<<..<<.........>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<...........>>...<......>..<<<<<.....>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<<<....>>.>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>.....<<.....>>.......>>>>>>.>..>.>>..<<<<<<....<<<<<....>>>>>..<<<<<<<...<<<<<<.<<.....<<<...<..<<<<<<.<<<<<<<<..<..<<<<<<<<<..>>>>>>>>>>.>>>>.....>>>>.....<<<<.<<<<<.....>>>>>..>>>>>>>>.>>..>..>>.>.....>>.>>>>>>...>>>>>>>.....<<<<<<.<<<......>>>.>>>>>>....<<<......>>>...<<<<<.<<...<<<(((.....<<<<<<.....<<......<<..<<<<<<<........<<<<<<.<....<<<<.......>>>>....>........<<<......>>>..>>>>>>......>>>>>>>.>>...........)))>>...>>>>>>.>>>...>>>>>>><<<<..<<<<<<<<<<<<....>>>>>>>>>>>>...>>>>....>>>>>>..<<<<<<..<<<....<<..<<..<<...>>..>>..>>....>>>.>>>>>>........>>>>>><......<<.....<<<.<<<<<<<<<<<.....>>>>>>>>>>>.>>><<<<<...<<<<<.<<........((...<<<.<<<...<<<.<<<<<<<..>>>>>>>>>>...>>>....)).........<<<.<<..(((((..>>.>>>..............>>>..>>......<<......>>>>>>>..<<<.....>>>..>>>>>....<<<<....<<<<<<<<.<<.........<......<<.<<....<....>.....>>>>..<<<.<<...<<<<..>>>>....>>.>.>>.............<<<<<<<<<..<<<.........>>>..<<<<<<.......<<<<.....>>>>.......>>>>>>....<<.<<<..<<<<<<<..<<....<.......<<<<<<<.......>>>>>>>.......>....>>>>>>>..>>>>><<<<<........>>>>>........<...........<<<<<<.....>>>>>>.....>....>>.....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<..<<<.[[......<<<<.[[<<<<..<<<<<..<<<<<.<<..<<<<<<<<...<<<<<...........<<<<<<.<<<.....>>>...........>>>>>>..>>>>>.>>>>>>>>......<<<<.....>>>>....>>.>>>>>...>>>>>...<<.......>>.<<<<<<...........>>>>.>>..<<.....<.......<<<..<<<<...>>>>..>>>.>..........<<<<<<.......>>>>>>.............<<<<<<<<<......>>>>>>>>>................<<<<<<<.....<<<<.........>>>>.<<<<..<<<<<<<.<<<.<..<<<<<..>>>>>.>>>>.>>>.>>>>...<<<<<<<<<..>>>>>>>>>........>>>>......<<<...(((>>>...>>>>>>>...<<<<..<<<.........>>>..>>>>.<<<....>>>.>>))).......<<<<<<.(...>>>>...)>>>>>>............>>>>..]]>>>>.......<<<<.<...<<<<<...<.........>...>>>>>....>>>>.>.......<<<<<.<<<<<...<<<<<<<<.........>>>>>..>>>..<<<<.....>>>>.......>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..>>>.>>>>>>>.....<<<<<<...<<<<<...<<<<<...............>.>>......<<<<<..>>>>>>>.<<<<<<...<<<<...<<<<<<<<<<<<<<.<<<..>>>...<<<<...)))))..>>>>........>>>>>>>>>..>>>>>...>>>>.>>>>>>..<<<.<..<<<<<...........>>>>>...>>>>.>>>>>...>>>.>>>....<<<.<<<<<.......>>>>>....<<<<<<<<<<<<.....<<<<....>>>>....>>>.>>>>>>.>>>.....>>>....>>>>>>>>.....>>>>>>>>>>. ((((..((((((.......(((((((((..))))...(((..(....((((((((((...[.(((....((((((((((.(((((..{..[.)...[.((((((...........}.]].))))))....))))..((....))..........((((((.....(......)......))))).).........((....))...(((((.....((....))....)))))...(((..............(((((((......)))))))........(((((..{{{{)))))..)))......))))))))).)...............((....))....)).).....)))))))))).....(.((((..((.........))..)))).{.(.(........).).((((((....(((((((((((((..((...........))...(......)..((((.......))))...)))))))))))))..((.(...((((((.....((((((((((.((((......){)))...(((..((((.......A)))).)))..).))))))))).(...((.....))....)..))))))....).))..((((((....(((((....)))))...((((((..(((((((.((.....(((...(..((((((.((((((((.....((((((((....))))))))..)))).....))))......(((.(.(((.....))).)..))).)))).))..)..)).).....)).))))))..)))))))......((((((.(((......))).))))))....(((......)))...(((((.((...((([[[...(.((((((.....((......((..(((((((.......<((((((......(((.........)))..........(..(((......)))).))))))......))))))).))...........]]]))...))))))))))...)))))))(((((.((((((((((((....)))))))))))).).))))....))))))(.((((((..(((.....(.]((..((...))..))..).....))).))))))..).....))))))(......((.....(((.(((((((((((.....))))))))))).)))((((....((((..((.(......[[...(((.(((.(.(((.((((((....)))))))))..))))....]](........(((.((..[[[[[..)).))).(..).......).))).)))......((......)).))))..((.......))...))))....((((....((((((((.((..(....(........((.((....(.[..).....))))..(((.((..(((((..)))).<).)).).)).(...).......(((((((((.}.((.........))...((((((........(((.....)))........)))))).]..((.(((..(((((((..((....(.......(((((((.......))))))).......)....)))))))..)))))(((((........)))))........((..........((((((.....))))))..)..)....)).....)).))))))).)..))).)))))))).)))))).....)).[..(((((.....}].)))))..(((((((..(((.((......((((.((((((..(((((..(((((.((..((((((((...(((((.(......[..(((((..(((.....)))..........].)))))).))))).))))))))......((((.....))))....)).)))))...)))))...((.......)).((.(((...........)))..))(.((.....(.......(((..((((...))))..))).)......(...((((((.......))))))...........).(.((.(((........))).)).)................(((((((..((.((((.........)))).((((..((..(((.(((.((.((.((..)).))))))).))..).))...(((((((((())))))))))........))))....)).((...[[[))....)))))))...((((..(((......<..)))..)))).(((....))).))]]].......((((((.(...}}}}...)))))))......)>....))))..))))))......(((((.(...(((((...((.......))...)))))....)))).).).....(((((.(((((...((((((((.........)))))..)))..((((.....)))).......))))..)...))).))....(((((((....))).))))..a.))..))).)))))))....)((((((...(((((...((((......(....)......))......(((((..))))))).((((((...((((...((((((((((((((.(((()))).(.((((...]]]]]..)))).....)>.)))))))))..)))))...)))).))))))..(((....(((((....>......)))))....))).)))))...))).)))....(((.(((((.......)))))....((((((((((((.....((((....))))....))).)))))).))).....)))....)))))))).....)))))))))). The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site; 23S rRNA 6ywy aa 1435 3.05 RF00177,RF01959,RF01960 URS00021ED984_5141 33056988 0003735 0005840 5141 auagaugaguuuggugauggcucugauugaacacuguccaaauacuugacacaugcuaaucgaacguuuaauuuuggcucuuaauuaaaagugguguacaggugaguauaauauuuuuucgcuuaacuuaaagugaaggcaaauccuucauauugcaaaaggauaucuauauccgcuuuaagaggaugagaaaaguuucagagauagguaguuguuaaggucauggcuuaacaagccaauaauucucuuagucgaagcugaaaaggcugaucgaccacauugggaaugaaaaaaucccaaggcaaauagguacagcagugaggaaucuuggucaaugggcccacgccugaacugguaacuuggaggaaugagacgucgauuuaucgaguaaaauucuguauacauauugauaaugacaauauguacauuugucuugacuaauuacgugccagcagucgcggcaauacguaagagacuaguguuaaucaucauaaauagguuuaaaggguacucagacggaaaaauucgcccaaauauaggggacaauuuuucuagaguuuuauguaagaaggucguacucuagaguggagagauaaaauucugugauaccuaggggacggguaaaggcgaaggcaaucuuuuauguaaaaacugacgucgaaggacgaaggcaaagggaacaaaaaggauuagauaccccaguagucuuugcagacaauuaugaaugccauagguuagauuuuuaauuuagucuauaaaugaaaguguaagcauuucaccucaagaguaaggcggcaacgcaggaacugaaaucacuagaccguuucugacaccagcaaugaaguauguuauuuaauucggugacccacgaaaaaccuuaccacaauuugaauauuaauuauuaauacaaguguugcacggcugucuucaguugauguugcgaaacugugguucguuccauggaauuaacguaaacccuugcuuuauuuguaaauauuauaaagcaguucaccuuuauauaggaaaugauaaaagggaucaagacaagucaucauggccuaaauauugugggcuauagacgugccacauuuuccuaaacaaagagaugcaaaaaugugaauuuuagcuaaucucaaaaaauaggauaaaaauauacaaggauuguagucugaaauucgacugcaugaauaagaaauugcuaguaaucgugaaucaccaugacacggugaauauucccucggauugguacuaaccacucgucacaugcugaaaggagugcgugcaauaaguuugcuuuucuguuauaaguaaguagacauauagguuuagauguuauaauaggauccuucguaugcgcggcucugauuaguguuaagucgaaauacgguucguguaguggaaguugcacgggacuuaucaauguugaacaauacga ......((((..<<<<<<.))))<<<<<.<<<<<..<<<<<.<<.....<<<.<<<..<<<..<<.<<<<<<<..<<.>>..>>>>>>>.>>>>>......<<.........<<<<<<<..<<...<<<<<<<<<<<<<.....>>>>>...........<<<<<<..>>>>>>>>>>>>>>.>>....>>>>>>>...<<<<<..<<<..<<<<<<<<.......>>>>>>>>>>>......>>>>>..<<<<.<<<<.....>>>>...>>>>.>>.<<<<<...........>>>>>.<<......>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>..>>>>>.<<<<......<<<<<..>>>>>.....>>>>....<<<<<<<<<.......>>>>>>>>>.....<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<<..<..<<<.<<<<<<<<.<<<<.......>>>..>>>>>>>>>...<<<<<......<<<<<<<.<..<<<<<<.<<<..<<<......>>>.....>>>>>>>>>..>........<<....>>.>>>>>>>......>>>>>...>>>...>.>>....<<<<<<...<<.....<<.........>>.....>>>>>>>>..........<<<<<<.<<<<<<<<<<<<...>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<........<<<....>>>......>>..>>>>>><<<<<...<<<<<....<<<<<<...<<<<<<<<<......<<........>>..........<<<<<<<.....<<<<<<<.>>>>>>>..<<.<<...<.<<<<<<<....<<<<<<<<<....>>>.<<<<......>>>>...>>>>>>.....<<<<<<<<<<<<...........>>>>>>>>..<<.<<<......>>>....>>....>>>>.....>>>.>>>...>.>.>>>>....>>>>>>>...>>.>>>>>>>.......<<<<<......<<<..<...<<<<....>>>>...>....>>>......>>>>>............<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<...........>>>>>>..........>>>>>..>>>.>>....<.<<<.<..<<<<<<<..<<<<<.<<<<<<....<.......<<<<<<<<<<<.....<<<<<......>>>>>....>>>>>>>>>>>.....>...>>>>>>>>>>>..>>>>>>>...>.>>>..>.....<<<<<<<<<....>>>>>>>>>......................... ......[[[[..(((((..]]]].((((.(((((..(((((.(((....(((.(((..(((..((.((((((...(...)...)))))).)))))......(((......(.((((((((.((...(((((((((.(((.....))).)...........((((((..)))))))))))))).))..)[))))))))..(((((..(((..((((((((....]..)))))))))))......)))))..((((.((((.....))))...))))))).((((((.........)))))).((......))...)))))).).....(.(((...(((((....)))).))))).))..))))).((((......((((....)))).....))))....(((((((((.......))))))))).....((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((.....(((.((((((((.((((.......)))..)))))))))..((((((.......((((((((..((((((.((...((........))......))))))))..)).......((....)).)))))).......)))))..)))).....))....((((((...((.....((.........)).....))))))))......{...((((((.((((((((((((...))))))))))))..((..]]))....)))))))))).((........(((....)))......))...)))))(((((...(((((.(...(((((...(((((((((......((........))..........(((((((..(..(((((((.)))))))).((.(((....(((((((....(((((((((....))).((((......))))...)))))).....(((.((((((((...........))))))))..((.(((......)))....)).....))).....))).)))...)..)))))....)))))))...)).)))))))..(....(((((......(((..((...(((....)))...))....)))......)))))............(....(((((((........)))))))....)..)..))))).....((((((...........))))))......)...)))))..))).))..(.(..((.(..(((((((..(((((.((((((....(...(...(((((((((((.....(((((......)))))....)))))))))))..)..)...)))))))))))..)))))))...).))...)..)..(((((((((....)))))))))}......(...)............. The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site; 16S rRNA 6zdp B 67 2.85 URS00021ED8E0_294747 33856462 294747 gguuuagaucuaaggacuuccuaauuagugguuuguccaauguucgggcaugcuagacucugaaccc <<<<<<<<<<<<.<<<<..<<........>>...>>>>.<<<<<..>>>>>..>>>>.>>>>>>>>. ((((((((((((.((....((........)).....)).(((((..)))))..)))).)))))))). Structure of telomerase from Candida Tropicalis in complexe with TWJ fragment of telomeric RNA; Chains: B 6zm5 A 1534 2.89 RF02541,RF02540 URS00021ED93A_9606 33602856 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacacugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaaauagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguuuguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<..<<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>...>..>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>.<.<<<......>>>.>..<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<...<<<<........<<<<<.<<........>>.>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>......>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<..>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((..(......(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))).((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((........)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(())......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide; 16S mitochondrial rRNA 6zm5 AA 954 2.89 RF00177 URS00008F947B_9606 33602856 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgcccgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggaaagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<.......))...>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide; 12S mitochondrial rRNA 6zm6 A 1531 2.59 RF02541,RF02540 URS00021ED93A_9606 33602856 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaaugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaaauagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguuuguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>.<.<<<......>>>.>..<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<.<<.....>>.>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<..>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(())......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA; 16S mitochondrial rRNA 6zm6 AA 954 2.59 RF00177 URS00008F947B_9606 33602856 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgcccgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggaaagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<....<<<.....>>>....>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA; 12S mitochondrial rRNA 6zxz A 26 2.44 URS000080DE5C_32630 34094374 32630 gcuccuaguacgagaggaccggngug <<<<<...............>>>>>. (((((.....(....)....))))). Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification; Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification 6zxz B 26 2.44 URS000080DE5C_32630 34094374 32630 gcuccuaguacgagaggaccggngug <<<<<...............>>>>>. (((((.....(....)....))))). Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification; Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification 6zxz C 26 2.44 URS000080DE5C_32630 34094374 32630 gcuccuaguacgagaggaccggngug <<<<<...............>>>>>. (((((.....(....)....))))). Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification; Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification 7a0s X 2699 3.22 RF02540,RF02541 URS0002311A26_243230 34417608 0003735 0005840 243230 ggucaagauaguaaggguccacgguggaugcccuggcgcuggagccgaugaaggacgcgauuaccugcgaaaagccccgacgagcuggagauacgcuuugacucggggauguccgaauggggaaacccaccucguaagagguauccgcaaggaugggaacucagggaacugaaacaucucaguaccugaaggagaagaaagagaauucgauuccguuaguagcggcgagcgaacccggaucagcccaaaccgaaacgcuugcguuucgggguuguaggaccaucaagccgaaguggcuggaaagcuacaccucagaaggugagaguccuguaggcgaacgagcccugaguaggucguuguucgugaaacgaugacugaauccgcgcggaccaccgcgcaaggcuaaauacucccagugaccgauagcgcauaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaagagaaccugaaaccguggacuuacaagcagucauggcaccuuaugcguguuauggcgugccuauugaagcaugagccggcgacuuagaccugacgugcgagcuuaaguugaaaaacggaggcggagcgaaagcgaguccgaauagggcggcauuaguacgucgggcuagacucgaaaccaggugagcuaagcaugaccagguugaaacccccgggggcggaggaccgaaccggugccugcugaaacagucucggaugaguuguguuuaggagugaaaagcuaaccgaaccuggagauagcuaguucuccccgaaauguauugagguacagccucggauguugaccauguccuguagagcacucacaaggcuaaaaccuuaugaaacuccgaaggggcacgcguuuaguccgggagugaggcugcgagagcuaacuuccguagccgagagggaaacaacccagaccaucagcuaaggucccuaaaugaucgcucagugguuaaggaugugucgucgcauagacagccaggagguuggcuuagaagcagccacccuucaaagagugcguaauagcucacuggucgagugacgaugcgccgaaaaugaucggggcucaagugaucuaccgaagcuauggauucaacucggaguugucugguaggggagcguucaguccgcggagaagccauaccggaaggagugguggagccgacugaagugcggaugccggcaugaguaacgauaaaagaagugagaaucuucuucgccguaaggacaaggguuccuggggaagggucguccgcccagggaaagucgggaccuaaggugaggccgaacggcgcagccgauggacagcaggucaagauuccugcaccgaucauguggagugauggagggacgcauuacgcuauccaaugccaagcuauggcuaugcugguugguacgcucaagggcgaucgggucagaaaaucuaccggucugccucagacguaucgggagccgaaguuggaaacgcgacggugccaagaaaagcuucuaaacguugaaacaugauugcccguaccgcaaaccgacacagguguccgagugucaaugcacuaaggcgcgcgagagaacccucguuaaggaacuuugcaaucucaccccguaacuucggaagaagggguccccacgcugcguggggcgcagugaauaggcccaggcgacuguuuaccaaaaucacagcacucugccaacacgaacaguggacguauagggugugacgccugcccggugccggaaggucaaguggagcggugcaagcugcgaaaugaagccccggugaacggcggccuaagguagcgaaauuccuugucggguaaguuccgaccugcacgaaaggcguaacgaucugggcgcugucucaacgagggacucggugaaauugaauuggcuguaaagaugcggccuacccguagcaggacgaaaagaccccguggagcuuuacuauagucuggcauugggauucggguuucuagaaacuuggauuucuaaccugaaaaaucacuuucggggaccgugcuuggcggguaguuugacuggggcggucgccucccaaaauguaacggaggcgcccaaaggucaccucaagacgguuggaaaucgucuguagagcgcaaagguagaagguggcuugacugcgagacugacacgucgagcagggaggaaacucgggcuuagugaaccggugguaccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagaguccauaucggcggggagguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgcuacgggcgcaggagaauugaggggaguugcuccuaguacgagaggaccggagugaacggaccgcuggucucccugcugucguaccaacggcacaugcaggguagcuauguccggaacggauaaccgcugaaagcaucuaagcgggaagccagccccaagaugaguucucccacugaagguaagacucccggaagaccaccggguuaagaggccaggcgugcacgcauagcaauguguucagcggacuggugcucaucagucgaggucuugacca <<<<<<<<......<<<<<<<<<<<....<<<..<<<<<<<<<<<<......<<<<<<.[...((.>>>.....<<<<<<...<<.))...]..>>......>>>>>>...>>>....<<<....>>><<<<......>>>><<<<....>>>>>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...<<<....<<<<<<<<....>>>>>>>>......<<.....<<..<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>....>>...>>.....<<<<<<<<.........>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>..............<<....>>....>>.........<<<<....>>>>.............>....>>>>>>>>>>>.......<<<<<<<<<<.......>>>>>>>>>>...<.<........>.>.<<<<<<....<<<.<<<<<<<<<<..<<<...<<<....>>>...>>>...<<....>>...<<......>>.........>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<.....<<<<..>>>>......>>>...<<<<.<.<<........>>.>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<..<<<<<<...<<<...<<<.<<<<......>>>>.>>>..>>.>...>>>>>>...>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<.....<<.......>>.....>>..........<......>....>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><..<<<<<...>>>>>..>....>>>>>><<<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>.>>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<<..>>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<...<<...<<<<....<<<<..<<<..<<<<<.<<<<.<<...[[....>>>>>><<<<<<<.<<..<<<<<<<<<<...<<.....>>.>>>>>>.>>>>..>>>>>>>>>...<.>....>>>>>...>>>...>>>>.........>>>>...>>......>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<.>>>>>>>>............<<<<<<<<<..<<...........>>..<<<<<<<.....<<<.....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>>...........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<.<<<<......>>>>.>>>>>>>...<<<<<<.......>>.>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<.<.<<.......>>..>>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.]].>>>>>>...>>>>>...>>>>.>>>>>....<<....<<<<.............>>>>....>>..>>>>.......>>>>>>>..<<..>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>>. ((((((((......((((((((((.....(((..(((.((((((((......((((((.[...[[.))).....((((((...((.]]...]..))......))))))...)))....(((....)))(((((....)))))((((....))))))...((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))....(((...((((.(........).))))....{.(((....((..(((...(((((......)))))[[(...).(((.....]])))...)))....))..))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)).......)).)))).).))..............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.[..).)))))))))).<.(.(........).).((((((....(((.((((((((((..(((...(((....)))...)))...((....))...((......)).........)))))))))))))..((.(...((((((.....((((((((((.((((....((((()))))....)<)))...(((..(.((........)).).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((..(((((.((((((...(((...(((.((((......)))).)))..)).)...)))))).).))).)))))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((.((((.............(.(...(............)...))..........(......)............)))).))))).))..........]]].)....))))))))))...)))))))(..(((((...)))))..)....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((...((...((((....(((((.(((..(((((.((((.((...{{....))))))(((((((.((..((((((((((...((.....)).)))))).))))..)))))))))...(.)....)))))...)))..)))))(..).....))))...))......))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))((((((((.))))))))(...).......(((((((((.>.(...........)...(((((((.....(((.....))).......))))))).]((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))...........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(....(..(..(.......).)...)...)...((((((.......)).))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....((((.((....))..))))....)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))....((....((((.............))))....))..))))..]....)))))))(.((..))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...))))))))). 50S Deinococcus radiodurans ribosome bounded with mycinamicin I; RNA (2732-MER) 7azo 16SA 1512 3.3 RF00177,RF01959,RF01960 URS0000901708_300852 36827973 0003735 0005840 300852 ggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccuccu ...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<<...>>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<...<<<<<<......>>>>>.>...>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>....<<......>>...>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<<.....>>>>>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ...((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(.((.((..(.....)..)).)).).)))))......(((......((((((((..((...(((((((.(((((....((((((....)))))).....)))))....((((.(((((....))))).))))...((((...)))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....((((.....)))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((.(((...(((((......)))))....((((....))))..)).)))))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((....(..(((.....)))).....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..(((.((((....))))).))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 16S rRNA 7azo PSIA 76 3.3 RF00005 URS00005AA258_562 36827973 0030533 0006412 562 gcccgganagcucagncgguagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; Phe-tRNA 7azo 23SA 2889 3.3 RF02540,RF02541,RF00002 URS00023359AD_300852 36827973 0003735 0005840 300852 gucaagaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuuuuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaacggccgaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguuggagcagccaucauuuaaagagugcguuagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuugacc <<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.....>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...(((....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<....>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....<<..>>....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.<..<<<<<......>>>>.>..>.>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<.......>...>>.........<<....>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..((((...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.........<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<.<<..<<<.......<<<<<<<<..>>>>>>>>....>>>............>>.>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<.(((..>>>>..)))>>>>>>.............>>>>..]]>>>>.......<<<<.<<<<<<<<<..<<.......>>>..>>>>>>>..>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))))>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>. 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70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 23S rRNA 7azo 5SA 122 3.3 RF00001 URS000080E212_300852 36827973 0003735 0005840 300852 aaucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga ..<<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.....<.<<<<<<<<....>>>>>>>>...>...>>>.>>>>>>>>>>> ..(((((((((((....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......))).))))))))))) 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 5S rRNA 7azo 16SB 1508 3.3 RF00177,RF01959,RF01960 URS0000901708_300852 36827973 0003735 0005840 300852 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70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 16S rRNA 7azo PSIB 76 3.3 RF00005 URS00005AA258_562 36827973 0030533 0006412 562 gcccgganagcucagncgguagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; Phe-tRNA 7azo 23SB 2873 3.3 RF02540,RF02541,RF00002 URS00023359AD_300852 36827973 0003735 0005840 300852 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70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 23S rRNA 7azo 5SB 121 3.3 RF00001 URS000080E212_300852 36827973 0003735 0005840 300852 aucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga .<<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>.......>>>.>>>>>>>>>>> .(((((((((((....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......))).))))))))))) 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977; 5S rRNA 7azs 16SA 1511 3.1 RF00177,RF01959,RF01960 URS0000901708_300852 36827973 0003735 0005840 300852 ggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccucc 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70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 16S rRNA 7azs PSIA 76 3.1 RF00005 URS00005AA258_562 36827973 0030533 0006412 562 gcccgganagcucagucgguagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; Phe-tRNA 7azs 23SA 2889 3.1 RF02540,RF02541,RF00002 URS00023359AD_300852 36827973 0003735 0005840 300852 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70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 23S rRNA 7azs 5SA 122 3.1 RF00001 URS000080E212_300852 36827973 0003735 0005840 300852 aaucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga ..<<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.....<.<<<<<<<<....>>>>>>>>...>...>>>.>>>>>>>>>>> ..(((((((((((....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......))).))))))))))) 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 5S rRNA 7azs 16SB 1507 3.1 RF00177,RF01959,RF01960 URS0000901708_300852 36827973 0003735 0005840 300852 ggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagacaugcaagucgugcgggccgcgggguacuccguggucagcggcggacgggugaguaacgcgugggugaccuacccggaagagggggacaacccggggaaacucgggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaauggcccaccaaggcgacgacggguagccggucugagaggauggccggccacaggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugccagcagccncgguaauacggagggcgcgagcguuacccggauucacugggcguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgugggggagcgugggauacgcucaggcuagacggugggagagggugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaugcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaannaacgcgaagaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaaggaggggacgacgucuggucagcaugncccuuacggccugggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacguucccgggccuuguacacacngncngunacgccaugggagcgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugacuggggcgaagucgnaacaagguagcuguaccggnnggugcggcuggaucaccuc ...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<<<<<<<..>>>>>>>>>>.>>>>>......<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<........<<<<.....>>>>..........>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<<..<<<<<<<....>>>>>>>....<<......>>...>>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<...<<<.....>>>.>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.......... ...((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((.(((((..))))).)))).)))))......(((......((((((((..((...(((((((.(((((....((((.(....).)))).....)))))....((((.(((((....))))).))))...(((.....))).)))))))..))))))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....(((((...(....(((.......))).....)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....((((((....((........)).......))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((...))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((..((...(((.(.(....).).)))...((((....))))...))..)))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((....(...((.....)).).....))))))).....(((((....)))))........)))).....).).)))...)).)))))....)))))))..[)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((......]...)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.((((....(((....))).)))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}......... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 16S rRNA 7azs PSIB 76 3.1 RF00005 URS00005AA258_562 36827973 0030533 0006412 562 gcccgganagcucagucgguagagcaggggauugaanauccccgunnccuuggnucgauuccgaguccgggcacca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>.... (((((((..((((.....[..)))).((((.........)))).....(((((..]....)))))))))))).... 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; Phe-tRNA 7azs 23SB 2875 3.1 RF02540,RF02541,RF00002 URS00023359AD_300852 36827973 0003735 0005840 300852 gucaagaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcuugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgcaagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaaacggcccgaaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggauguugaucauuuaaagagugcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccguacgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcgucaagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucuugacc <<<<<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<..>>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<....>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....<<...>>....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<.<........>.>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<......<.<<<<<.<<.......>>..............>>>>>.>..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<....>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<.....<<.......<<<<.<<<....>>>.>>>>....>>...............>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<.............>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>>. (((((........((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((......)))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((....))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))................)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.(...(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..)..))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[.....((((((.....(.....((..(((((((((......{..((((...(.....)...........()...)))).....))))))))).))..........]]].)....)))))).)))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((....)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.(((((.....))))).))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.(.((((((.(............((....(......((....(.(..).)....))...)..............))...).)))))).).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....((((((..((..]]]]..)).)))))).....)}......))))..))))))......(((((.(.((((((....(.......)....))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(..((.......)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)..))))). 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 23S rRNA 7azs 5SB 121 3.1 RF00001 URS000080E212_300852 36827973 0003735 0005840 300852 aucccccgugcccauagcggcguggaaccacccguucccauuccgaacacggaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccugggagaguaggucggugcggggga .<<<<<<<<<<<....<<<<<<<<....<<<<<<...............>>>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>.......>>>.>>>>>>>>>>> .((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).))(((.......((.(((((....))))).)).......)))..)))))))))) 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569; 5S rRNA 7b9v 6 102 2.8 RF00026 URS00006184A9_4932 33705709 0030621 0000244,0000353 0005688,0046540 4932 guucgcgaaguaacccuucguggacauuuggucaauuugaaacaauacagagaugaucagcaguuccccugcauaaggaugaaccguuuuacaaagagauuu <<<<<<<<<<.....>>>>>>>>>>.....................................<<<..<<<.....>>>...>>>.................. ((((((((((.....)))))))))).....................................(((.((((.....)))..)))).................. Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound; U6 snRNA 7dvq F 60 2.89 RF00619 URS00021ED9B2_9606 33509932 0030622,0030627 0000244,0000395 0005691 9606 uguuguaugaaaggagagaagguuagcacuccccuugacaaggauggaagaggccggccu ............................<<<<<<<<...>>>>..>>>.><<<<<>>>>> ............................(((((((.....)))..))).)((((())))) Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex); U6atac snRNA 7eia A 19 3.0 URS00023358B2_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with pyrrolo cytosine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(4PC))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7eia B 19 3.0 URS00023358B2_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with pyrrolo cytosine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(4PC))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7eia C 19 3.0 URS00023358B2_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with pyrrolo cytosine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(4PC))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7eia H 19 3.0 URS00023358B2_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with pyrrolo cytosine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(4PC))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7f8z A 19 3.0 URS00023358D6_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with 2-aminopurine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(2PR))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7f8z C 19 3.0 URS00023358D6_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with 2-aminopurine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(2PR))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7f8z F 19 3.0 URS00023358D6_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with 2-aminopurine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(2PR))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7f8z G 19 3.0 URS00023358D6_32630 32630 ggcgangaaccggggagcc ................... ................... RNA kink-turn motif with 2-aminopurine; RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(2PR))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') 7jql 2A 2800 3.0 RF02540,RF02541,RF00002 URS00001698E8_300852 32787108 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((..((((....(((..........)).)....))))..))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(.(((.........))).)........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((...((.......((((.((....)).))))....)).............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(............(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution; 23S Ribosomal RNA 7jqm 2A 2800 3.05 RF02540,RF02541,RF00002 URS00001698E8_300852 32787108 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<.....<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>.>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>..<....<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>>.<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<....<......<<<<<<<<....>>>>>>>>...>..............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..((.((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))).))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.(((((.....))))).))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((........[..(((((...((......(((((.((....)).)))))...))...........].)))))..))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((.(.........).)))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((...............))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution; 23S Ribosomal RNA 7jqm 2x 76 3.05 RF00005 URS000041AF00_562 32787108 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(.(((..]....))).)))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution; P-site tRNA 7kvu G 83 2.68 URS000231199D_32630 34937911 32630 nggaagauacaaggugagcccaauaauaugguuuggguuaggauaggaaguagagccuuaaacucucuaagcgguaucuuccc <<<<<<<<<<.......<<<<<<......<<.>>>>>>..........<<.<<<<>>.....>>>>>>.....>>>>>>>>>> ((((((((((.......((((((......[[.))))))........(..(.((((]].....)))))....).)))))))))) Crystal structure of Squash RNA aptamer in complex with DFHBI-1T; Squash RNA aptamer 7l0z G 69 2.1 URS0000BC468E_32630 33376189 32630 gggaguacggugagggucggguccaguagguacgccuacuguugaguagagugugggcuccguacuccc <<<<<<<<<<.<.....<...<<<<<<<<<....>>>>>>>..>>.........>..>.>>>>>>>>>> ((((((((((.(.....(...(((((((((....)))))))..)).........)..).)))))))))) Spinach variant bound to DFHBI-1T; RNA (69-MER) 7lyj A 66 2.11 RF00507 URS0002311984_2697049 34845084 0075523 2697049 cgguguaagugcagcccgucuuacaccgugcggcacagcggaaacgcugaugucguauacagggcu <<<<<<<<<...(((((..>>>>>>>>><<<<<<<<<<<<....>>>>>.>>>>>>>....))))) (((((((((...[[[[[..)))))))))((((((((((((....))))).)))))))....]]]]] SARS-CoV-2 frameshifting pseudoknot RNA; RNA (66-MER) 7mkt A 23 1.97 URS0002617746_32630 36352138 32630 gugugugugugugugugugugug ....................... ....................... Crystal structure of r(GU)11G-NMM complex; RNA (5'-R(*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*G)-3') 7mky A 66 1.31 RF00507 URS0002311984_2697049 34845084 0075523 2697049 cgguguaagugcagcccgucuuacaccgugcggcacagcggaaacgcugaugucguauacagggcu <<<<<<<<<...(((((..>>>>>>>>><<<<<<<<<<<<....>>>>>.>>>>>>>....))))) (((((((((...[[[[[..)))))))))((((((((((((....))))).)))))))....]]]]] SARS-CoV-2 frameshifting pseudoknot RNA; RNA (66-MER) 7mlw F 125 2.7 RF00442 URS00023119BD_987057 34257148 0010468 987057 ggaucgcuaggguuccggucgugcggcgucgccgcacgaugcugguccgagagcaauccggucuugccuucgccucguucgcgaggaaacggcgaggcuccacggagggauaaaagcccgggagg <<<<.<<..<<...<<<<<<<<<<<<<<.>>>>>>>>>>>..>>>.>>....>>.>>>>.....<<<<.<..<<<<<....>>>>>..>.>>>>........<...<<<.......>>>....>. ((((.((..((...((((((((((((((.))))))))))).).)).))....)).))))((..(((((.(..(((((....)))))..).)))))..)).(.[...(((.......))).)..]. Burkholderia sp. TJI49 Guanidine-I riboswitch; Guanidine-I riboswitch 7nhk A 2905 2.9 RF02540,RF02541,RF00002 URS0002311A01_1351 34117249 0003735 0005840 1351 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccacauguacaggauagguaggagccgaugagaccggaacgcuaguuucggaggaggcgcuggugggauacuacccuuguguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccuggggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaacc .<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<<..>>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<.....<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<...<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.....<<<<<<<<<.....<<<...<<<<<<<<...<<.<<<<.....>>>>..>>...>>>>>>>>..>>.>.....>>>>.>>>>>...>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<.........>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>><.<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>..>.....>>>>>>.......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<.<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<............>>.....>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<.<..<<<<<...........>>>>>...>>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<.....<<<<....>>>>....>>...>>>>>.>>>...>>>>....>>>>>... ..((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((.....)))...)..)).)))......).))..((((((....(((((....)))))((((((((.....(((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).)))))...)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(.(..(((.........)))..).).....(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((.(..(((((....{{....))))).((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((............)).....))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).)))).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..)))))).......((((.(.((((((...((.......))...))))))...)))).)........((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).... LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis; 23S rRNA 7nhk a 1517 2.9 RF00177,RF01959,RF01960 URS0002311A16_1351 34117249 0003735 0005840 1351 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccgggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<.<<<<<<<<<..>>>>>>>>>..>....<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<........<<<<<....>>>>>....<<<>>>.....>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....(((((......)))))......)).).......((((((((....)))))))).......(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...(....(((((....)))))....((())).)...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis; 16S rRNA 7nhl A 2914 3.1 RF02540,RF02541,RF00002 URS000024712F_93061 34117249 0003735 0005840 93061 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VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus; 23S rRNA 7nhl a 1538 3.1 RF00177,RF01959,RF01960 URS00023119DF_93061 34117249 0003735 0005840 93061 ggagaguuugauccuggcucaggaugaacgcuggcggcgugccuaauacaugcaagucgagcgaacggacgagaagcuugcuucucugauguuagcggcggacgggugaguaacacguggauaaccuaccuauaagacugggauaacuucgggaaaccguagcuaauaccggauaauauuuugaaccgcaugguucaaaagugaaagacggucuugcugucacuuauagauggauccgcgcugcauuagcuaguugguaagguaacggcuuaccaaggcaacgaugcauagccgaccugagagggugaucggccacacuggaacugagacacgguccagacuccuacgggaggcagcaguagggaaucuuccgcaaugggcgaaagccugacggagcaacgccgcgugagugaugaaggucuucggaucguaaaacucuguuauuagggaagaacauauguguaaguaacugugcacaucuugacgguaccuaaucagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuauccggaauuauugggcguaaagcgcgcguaggcgguuuuuuaagucugaugugaaagcccacggcucaaccguggagggucauuggaaacuggaaaacuugagugcagaagaggaaaguggaauuccauguguagcggugaaaugcgcagagauauggaggaacaccaguggcgaaggcgacuuucuggucuguaacugacgcugaugugcgaaagcguggggaucaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuaggggguuucccgccccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacggggacccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaaaucuugacauccuuugacaacucuagagauagagccuuccggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuaagcuuaguugccaucauuaaguugggcacucuaaguugacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugauuugggcuacacacgugcuacaauggacaauacaaagggcagcgaaaccgcgaggucaagcaaaucccauaaaguuguucucaguucggauuguagucugcaacucgacuacaugaagcuggaaucgcuaguaaucguagaucagcaugcuacggugaauacguucccgggucuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagccgguggaguaaccuuuuaggagcuagccgucgaaggugggacaaaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<...<<<.........>.>>...>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<<<<.....<<.<<<....>>>.>>......>>>>......<<<.<<<<<<..>>>>>>>>>.......<<<<<<...>>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.......<.<<<<<<<........>>>>>>>.>........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<<..<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>.>..........<<....>>.>>>>>>>..>>>>>.>>>...>>>..>>>>>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<.....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<.....<<<<<....>>>>>..........>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<..<.<<<<<<<........>>>>>>>>...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<....<.<<<<..<<<..<<<...>>>.>>>.>>>>.>...>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ...((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(((....((((.......).)))....))).)))))......(((.......(((((((..((...(((((((.((((.....((.(((....))).))......))))......(.(((((((....))))).)))......((((((...)))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..(((.......((((....))))......)))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((.(((((...(((((((.....(((((.(...((........))......).)))))............((....)).)))))))..)))))..))..))))...))))....((((((....(...((((.........))))...).))))))..........((((((..((((((((((((...(..)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.....(((((....)))))..........)))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..(((...))).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))............ VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus; 16S rRNA 7nhm A 2824 3.1 RF02540,RF02541,RF00002 URS000024712F_93061 34117249 0003735 0005840 93061 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70S ribosome from Staphylococcus aureus; 23S rRNA 7nhm a 1531 3.1 RF00177,RF01959,RF01960 URS00023119DF_93061 34117249 0003735 0005840 93061 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70S ribosome from Staphylococcus aureus; 16S rRNA 7nhn A 2908 2.9 RF02540,RF02541,RF00002 URS0000D28EF9_169963 34117249 0003735 0005840 169963 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VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes; 23S rRNA 7nhn a 1513 2.9 RF00177,RF01959,RF01960 URS0002311A12_169963 34117249 0003735 0005840 169963 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgaacggauguuaguggcggacgggugaguaacacgugggcaaccugccuguaaguuggggauaacuccgggaaaccggggcuaauaccgaaugauaaaguguggcgcaugccacgcuuuugaaagaugguuucggcuaucgcuuacagaugggcccgcggugcauuagcuaguugguaggguaauggccuaccaaggcaacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuuccgcaauggacgaaagucugacggagcaacgccgcguguaugaagaagguuuucggaucguaaaguacuguuguuagagaagaacaaggauaagaguaacugcuugucccuugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgcgcgcaggcggucuuuuaagucugaugugaaagcccccggcuuaaccggggagggucauuggaaacuggaagacuggagugcagaagaggagaguggaauuccacguguagcggugaaaugcguagauauguggaggaacaccaguggcgaaggcgacucucuggucuguaacugacgcugaggcgcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuaggggguuuccgccccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuggagacagagcuuucccgggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuugauuuuaguugccagcauuuaguugggcacucuaaagugacugccggugcaagccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaauggauaguacaaagggucgcgaagccgcgagguggagcuaaucccauaaaacuauucucaguucggauuguaggcugcaacucgccuacaugaagccggaaucgcuaguaaucguggaucagcaugccacggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucgguaggguaaccggagccagccgccgaaggugggacagauaauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<..>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<<<.<<.....<<<<<<....>>>>>>......>>.>.....<<<<<<<<<<....>>>>>>>>>>.....<<<<<<....>>>>>>>>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.......<<<<<<<<<........>>>>>>>.>>.......>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<....<<<<<....>>>>>....<<<>>>.>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<....<.<<<<..<<<..<<>>.>>>.>>>>.>...>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.(((....))).)))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....((((((((((....)))))))))).....(((((......))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......(((......))).....))))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...((((((.....(((((....)))))....((()))..)))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...((((((......(((..((...(((....)))...))....)))......))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..(()).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes; 16S rRNA 7o1a AA 1534 2.4 RF00177,RF01959,RF01960 URS000081169C_83333 34504068 0003735 0005840 83333 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<<<..>>>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<<..>>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>..<<.<<<<<......<<<.<<<<<<.......>>>>>>>>.>........>>>>>....>>.<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<.....<<<<....>>>>......<<....>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((((..)))))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((...(....).)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((.(...(...((.((((((.......)))))))).....)....).)))....)).(((.([[[...(((((.....((.]]])).......)))))).)))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))).))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((....((.((....)).))......(....)...))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan; Ribosomal RNA 16S 7o1a BA 2897 2.4 RF02540,RF02541 URS0000A7632D_83333 34504068 0003735 0005840 83333 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgnggauaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<<..>>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<....<.<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<<<.....>>.>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<<.<<....>>..>>>>>>..>....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((((.....)).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(((((.(((..(((.........)))..))).....(...((......)).).)))))...)))..))))).))...........]]].)...))))))))))...)))))))((((((((......))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((.((((.((((.(..........(.((..(((......((((((((....))))))))...)))............)).).).)))).)))).))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan; Ribosomal RNA 23S 7o1a BB 120 2.4 RF00001 URS0000049E57_83333 34504068 0003735 0005840 83333 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggcau <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>>. ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))). Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan; Ribosomal RNA 5S 7o1c AA 1534 2.6 RF00177,RF01959,RF01960 URS000081169C_83333 34504068 0003735 0005840 83333 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<.<....>.>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<<..>>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>..<<.<<<<<......<<<...<<.<<....>>.>>...>>.>........>>>>>....>>.<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<....<<<<<....>>>>>.....<<....>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((((..)))))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((.(...(...((...((.(.......)))...)).....)....).)))....)).(((.([[[...(((((.....((.]]])).......)))))).)))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))).))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((....(((((....))))).....((....))..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan; Ribosomal RNA 16S 7o1c BA 2897 2.6 RF02540,RF02541 URS0000A7632D_83333 34504068 0003735 0005840 83333 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgnggauaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<.....>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<..<<....>>...>>>>>..>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))..(((((((..((((((((((.....(((...(((.((((...((((.....)).))...)))).)))..)).).....)))))).)))..)))))))).....(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(((((.(((..((((.......))))..))).....(..(((......)))).)))))...)))..))))).))...........]]].)...))))))))))...)))))))((((((((......))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((((...(.((...(..........((((...((......((...(((....)))...))...)).............)))).)...)).)...)))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan; Ribosomal RNA 23S 7o1c BB 120 2.6 RF00001 URS0000049E57_83333 34504068 0003735 0005840 83333 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggcau <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>>. ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))). Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan; Ribosomal RNA 5S 7oa3 A 51 2.8 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form); Chili RNA Aptamer 7oa3 B 51 2.8 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form); Chili RNA Aptamer 7oav A 51 2.99 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form); Chili RNA Aptamer 7oav B 51 2.99 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form); Chili RNA Aptamer 7oav C 51 2.99 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form); Chili RNA Aptamer 7oav D 51 2.99 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form); Chili RNA Aptamer 7oaw A 51 2.95 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBI+; Chili RNA Aptamer 7oaw B 51 2.95 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBI+; Chili RNA Aptamer 7oaw C 51 2.95 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBI+; Chili RNA Aptamer 7oaw D 51 2.95 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBI+; Chili RNA Aptamer 7oax A 51 2.24 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<<..>>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBO+; Chili RNA Aptamer 7oax B 51 2.24 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBO+; Chili RNA Aptamer 7oax C 51 2.24 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBO+; Chili RNA Aptamer 7oax D 51 2.24 URS0002311967_32630 34112799 32630 gcuagcuggaggggcgccaguucgcuggugguugggugcggucggcuagcc <<<<<<<......<<<<<<<....>>>>>........>>....>>>>>>>. (((((((.(....(((((((....)))))........))...)))))))). Crystal structure of the Chili RNA aptamer in complex with DMHBO+; Chili RNA Aptamer 7odr A 1448 2.9 RF02541,RF02540 URS0002311985_9606 34135320 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacacugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcuggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacagaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacacucaauugauccaauaacuugaccaacggaacaaguuacccuagggacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucguuggaucaggacaucccgauggugcagccgcuauuaaagguucguuuguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauacccacacccacccaagaacaggguunnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>>.<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>..<<<<<<<<<<....[.>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>...........................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..............>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<................<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<....>>>....>>.>>>>........>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<<....<<<<<.<<<<<<..<<<<<.<<<<<<<<..........>>>>>>>>>>>>>..<<<<((((.>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>.....>>.........<<<....>>>............>>>>..>>>>>>>.......<<<<<<<<<...<<.......>>...>>>>>>>>>]....)))).<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>>>.....<<<<<<<....>>>.>>>>...>>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>...>..........<<<<.......>>>>................................ ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....))))(((.((((((((((.....((..........)).....))))))))))..))).((((((((((......))))))))))...(((......)))....(((.(((...(...................(((.........))).........(..(((......))))..........................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((..............)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.(((....(((((.((((((..(((((.((((((((..........)))))))))))))..(((([[[[[))))((((((...........))))))(.((.....((...(((....[..)))...)).....)).........(((....))).....)].....))))..))))))).......(((((((((.(.((.......)))..)))))))))...].]]]].(((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))))).....(((((((....))).))))..})))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).))))).....((((................))).).)..........((((.......))))................................ State A of the human mitoribosomal large subunit assembly intermediate; 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA 7ods A 1445 3.1 RF02541,RF02540 URS00023119F1_9606 34135320 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacacugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcuggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacagaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacacucaauugauccaauaacuugaccaacggaacaaguuacccuagggaagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauacccaccccacccaagaacaggguunnnnnnnnnnnnnnnnnnnnnnnnnnnnnn <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>...........................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..............>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<................<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<....>>>....>>.>>>>........>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<<....<<<<<.<<<<<<..<<<<<.<<<<<<<<..........>>>>>>>>>>>>>..<<<<((((.>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>.....>>.........<<<....>>>............>>>>..>>>>>>>......<<<<<<<<<...<<.......>>...>>>>>>>>>.....)))).<<<<<..<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>......>>>>>.....<<<<<<<....>>>.>>>>...>>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>...>.........<<<<.......>>>>............................... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(................(..(((.........)))..)......(..((........)))..........................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((..............)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((.....(((((.((((((..(((((.((((((((..........)))))))))))))..(((([[[[[))))((((((...........))))))(.((.....((...(((....[..)))...)).....)).........(((....))).....)].....))))..)))))))......(((((((((.(.((.......)))..)))))))))...].]]]].(((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))))).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))...).........((((.......))))............................... State B of the human mitoribosomal large subunit assembly intermediate; 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA 7odt A 1453 3.1 RF02541,RF02540 URS000080E357_9606 34135320 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacacugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcaaucacuuguuccuuaaauagggaccuguauuggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacagaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauacccaccccacccaagaacaggguu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<..<<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>...>..>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>...........................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..............>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<................<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.......<<..<<<<<<.....>>>>>>..>>...>>>....>>.>>>>........>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<..........>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>.....>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>......<<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>>...<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>...>.........<<<<.......>>>>. ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).{.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((........)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(................(..(((.........)))..)......(..(((......))))..........................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((..............)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.......((..(((((.......)))))..))...)))....)).))))....)..))).))))))).)))).)).....)).[..(((((.....}].))))).......((..(((.((......((((.((((((..(((((.((((((((..........)))))))))))))..((((.....))))((((((...........))))))(.((.....((...(((....[..)))...)).....)).........(((....))).....)].....))))..)))))).......(((..(.((((((.(.((.......)))..))))))...).)).)......((((((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))).)))...(((((((....))).))))....))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))...).........((((.......)))). State C of the human mitoribosomal large subunit assembly intermediate; 16S mitochondrial rRNA 7ood 3 2879 3.4 RF02540,RF02541 URS0000AB9B3C_272634 36171285,36171285 0003735 0005840 272634 aguuacuaagggcuuaugguggaugccuuggcacuaauaggcgaugaaggacguguuaaccugcgauaagcuucggguaggugguaagaaccucagauccggagauuuccgaauggagcaauccgguaguuggaaacagcuaucauuaauugaugaauaaauagucaauuaaagcaauacguggugaagugaaacaucucaguagccacaggaaaagaaaacgaaugugauuccguguguaguggcgagcgaaagcggaacaggccaaacuuaucauuagauagggguuguagggcuugcaauguggacuugaaaacgauagaagaagcuguuggaaagcagcgcgcaaaagggugauagccccguauuugaaauuguuuucauaccuagcgagaucccugaguagcucggaaaacguuauuuugagugaaucugcccagaccauuggguaagccuaaauacuaauuagugaccgauagcgaaacaguaccgugagggaaaggugaaaagaacccagagaugggagugaaauagauucugaaaccauaugccuacaacgugucagagcacauuaaugugugauggcgugcguuuugaaguaugagccggcgaguuaugauagcaagcguuaguuaaccaggagauggggagcuguagcgaaagcgaguuuuaaaagagcguuuguuuguuauuauagacccgaaacggguugagcuagucaugagcagguugaagguugaguaacaucaacuggaggaccgaaccgacucucguugaaacgauagcggaugacuugugauuaggggugaaauuccaaucgaaauccgugauagcugguucucgucgaaauagcuuuaaggcuagcgugagaucacaaauaaguggagguaaagcuacugaauguaugauggcgccaccuaggcguacugaauacaauuaaacucugaaugccauuuauuuuauucucgcagucagacagugggggauaagcuucauugucaagaggggaagagcccagaucauuaaauaagguccccaaaauauacuaaguggaaaaggaugugaaagugcuaaaacagcaaggauguuggcuuagaagcagccaucguuuaaagagugcguaacagcucacuugucgaguguuuuugcgccgaagauguaacggggcuaaguauauuaccgaauuuauggauaagauuuauaucuugugguagacgagcguuguauuggaguugaagucaaagcgugagcauugguggauccaauacaagugagaaugccggcaugaguaacgcuugggagugagaaucucccaaaccgauugacuaagguuuccuggaccagggucguccuuccaggguuagucuggaccuaagcugaggcugaaaagcguaggcgauggacaacagguuaauauuccuguacuuacaguuagacugauggagugacaaagaagguuuuccacccccauaauuggauuuggggauaaaucauaaggugguacaauaggcaaauccguugugcauaacauugagugaugaugucgagugaaaguagcgaaggugguauuaaucaugcuuucaagaaaagcuucuaggguuaaucuagcuguaaccaguaccgagaacgaacacacguagucaaggagaggauccuaagguuagcgagugaacuauagccaaggaacucugcaaauuaaccccguaaguuagcgagaaggggugcuuauguaaaaguaagccgcagugaagaacgaggggggacuguuuaacuaaaacacaacucuaugccaaaccguaaggugauguauauggggugacaccugcccagugcuggaagguuaaagaaggagguuagcgcaagcgaagcuuuuaacugaagccccagugaacggcggccguaacuauaacgguccuaagguagcgaaauuccuagucggguaaauuccgucccgcuugaaugguguaaccaucucuugacugucucggcuauagacucggugaaauccagguacgggugaagacacccguuaggcgcaacgggacggaaagaccccgugaagcuuuacuguagcuuaauauugaucaggacauuaucauguagagaauagguaggagcaaucgaugcaaguucgcuaggacuuguugaugcgaaagguggaauacuacccuugguugugugcuguucuaauugguaacuguuauccaguuucaagacaguguuaggugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcguacaaagguaccuucaguacgguuggaaaucguauguagaguguaaugguguaagggugcuugacugugagacauacaggucgaacaggugagaaaucaggucauagugauccggugguccaguauggaauggccaucgcucaacggauaaaagcuacuccggggauaacaggcugauacugcccaagaguucauaucgacggcaguguuuggcaccucgaugucgacucaucucauccucgagcugaagcagguucgaaggguucggcuguucgccgauuaaagagauacgugaguuggguucaaaccgucgugagacagguuggucccuaucuauugugcccguaggaagauugaagaguguugcuucuaguacgagaggaccgaagcgaggacaccucuuaugcuccaguuguagcgccagcugcaccgcuggguaguaacgugucuauuagauaaacgcugaaagcaucuaagugugaaacuaucucaaagauuaaucuucccauuucgaaaguaagagccgucaaagacgaugacguugauagguuacagguguaagcauagugauauguugagcugaguaauacuaauugcucgaggacu <<<......<<<<.<<<<<<....{[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((....<<<<<......>>>>>......<<<<<<<<<.....<....<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>...>..>>>>>..>>>>.....<<<<<<<<.......>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>.............}....>>>>>>.>>>>.......<<<<..<<<<......>>>>..>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<.<<........>>.>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<....<<<<<<<<<<......<<....<<..<<<<<...<.<<<<.....>>>>..>...>>>>>..>>..>>.......>>>>>>>>>>...>>>>>>.>>..<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((...<<<<<<<...........<<..<<<<<<<<<<.......<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>...>>>>>>>>>>.>>...........))).....>>>>>>>>>>...>>>>>>><<<<<<<....>>>>>>>....>>>>>><<<<<<<<<<<<......<<<<<.<<....>>.>>>>>...>>>>>>>>>>.>>.....>>>>>>.......<<...<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<<...<<<<...<<<..<<<<<<<<<....(((...>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>....>>>>..>>>>>...>><..<<.......>>...>>>>>....>>>....>>>>........>>>>>..>>.....>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<<...<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<......>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<..<<<<<<..<<....>>...>>>>>>..>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<.<<<.......>>>.>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>>>>>>>>...........<<<<<........>>>>>..<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<.<<<.<<<<..<<<...........<<<<<..<<<......<<<<<<<......>>>>>>>...>>>.............>>>>>..>>>..>>>>.>>>.>>...<<<..<<<<<.....>>>>>.>>>....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<<....<<<..<<<<<<<...............>>>>>>><<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>........>>>>>>>...<<..>>.....<<<<<<<<.........>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((.(((((.....(((..(((((((((((((......((((((....[[[.))).....((((((...(((]]]....)))......))))))...)))....(((....)))((((((((....)))))))).(((((((((.........))))))))).))....((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...(((((......)))))......(((((((((.....((...((((((((((.(((...(((((......)))))[[......(((.....]])))...)))...))))))))))..))..)))))..))))).....((((((((.[..).))))))).......(((((].[[[[)))))..)))......)).))))))).))...............((....))....)).........((((....)))).............).....))))).)))).....(.((((...(((..[...)))...)))).<.(.(........).).((((((....(((.(((((((((....((...(((.....)))...))....((....))..((((.....))))....))))))))).)))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.((.((........)).)))))..).))))))))).(.((.......))...)..)).)))......).))..((((((....(((((....)))))((((((((....((((((.(((.....(((....(((.(((((...(.((.(.....).))..)...))))).)))..)).).....))).))))))...)))))).))..((((((((((......))))))))))....(((......)))...((((.(((...((([[[...(((((((.....(.....((..((((((..((.....{..((((.(((..(((.........)))..))).....(...((......)).).))))....))..)))))).))...........]]].)...))))))))))...)))))))(((((((....)))))))....))))))(.(((((..(((......(.(((.((....))])).))...)))..)))))..).....)))))).......((...((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((((...(((((...((((..((((..(((((.(((.....{{...))).).(..(((((..((((..(((((.((.....)))))))......))))..)))))...).(..((.......))...)))))....))))...))))(..)....)))))..)).....))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))((((((......))))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))).)..))...))))))))..)))))(((((.........)))))........((..........(.(((.......))).)..)..)....))))...)).))))))).)..))).)))))))).))))))......).[..(((((.....>].)))))..(((((((..(((.((......((((.((((((..(((((.(((((((((.((.(((.(((...(((.(......[..(((((..(((......(((((.(......).)))))...)))...........].)))))).)))...))).))).))...(((..(((((.....))))).)))....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...)..(]..[[[).....)))))))...((((..(((...{..)))..)))).(((....))).))]]].......(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))....))..))).)))))))[...(((((((....(((..(((((((.....(....)....)))))))((((((...((((...(((((((((((.}}.))))))..)))))...)))).))))))..(((....((((.....}.......))))....))).)))...]....)))))))(.(((())))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells; 23S ribosomal RNA 7ow7 A 3303 2.4 RF02543 URS0002617716_9606 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgggcggaucugaccgucggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucggccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggaggucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccgggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggccgaggugggaucccgaggccucucgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucggcaguuuuauccgguaaagcgaaugauuagagguaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgcugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacaggaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcaguccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguaccunuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcuagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggagcucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaagaguuuuucacugacccggugaggcggggggcgcuucuggcgccaagcgcccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccgguccccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuugggucgggguuucguacguagcagagcagcgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<<...<<<<<<<<.........>>>>.>>>>.....>>>>...<<<<<<<<<.<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>....>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<....<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<..<<<<.<<.>>>>>>.>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<.<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<<..>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>............<<<<<..<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<.<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>>.>.>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<..>>>>>.>>.....>>>>>......>>.>>>>>....>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<..>>>..<<<<<...<<<..<<<.....>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<...<<<.<<<<<<<<<...<<<....<<<..<.<<<..>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<..........>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<<<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.................>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<<<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>.>.>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>>....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<..>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<..>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<..>>>>>>>...<<<<<.....<<<<..................<<<<<<<..>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<....<<<<<.................>>>>>..<<<<....<<<<....<<.<<<<<<.]]]..>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<..<<..<<<<....<<<........<<<<<.<<<..>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>.>>>>>><<<<<.<.............>..<<.<<<<<<<.<<.....<<<<.<..<<<<..>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..((((((((((.......))))).))))....))))....((((((((((((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))...))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((.(..((((((.(((((.((.))))))))))...)))).)))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((......(((((()))))).......)))).).)))........))))))..)))))))))))............((((((.((((((())))))).((((((.((((.((((((((((..((((((((((((.((((....)))).))))))))))))...))))))).)))...)))))))).))..(((((((..))))).))....)))))).....))).)))))...)))))...)))))))).[((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...(((())))..(((((...(((..(((.....)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((...(((.((((((((.....((.....((....(((())))....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((..........)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((................)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..................)....))...(((((........)))))]]((((.(((((...((((((......))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.((((..((..(....(.......(((((....(.{..).....)))))((.(((((((((())))..)))))).))(...).......(((((((((.].(...........)...(((((((....((((.....))))......))))))).}.(.(.(((..((((((.....(......(((......)))......)..))))..)))))((((()))))........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..)))).)...)))))....)).{..((.((.....]}.)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.(((((((())))))))...(((((.....((((..()..............(((((((())))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(...(((......))).....).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...>.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.............))))...))))..)))...).).)).).....((((((..((..((((.(..(((........(((((.(((()))).))))).......)))...(((...(((....((((.(((((((......)))))))))))...)))...)))...........)..))))..)).))))))(((((....(.......).....((.(((((((.((.....(.((.(..((((()))))..))).)....))....)))).))).))..))))).. EIF6-bound large subunit of the human ribosome; 28S rRNA 7ow7 B 120 2.4 RF00001 URS00000F9D45_9606 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. EIF6-bound large subunit of the human ribosome; 5S rRNA 7ow7 C 148 2.4 RF00002 URS0002617739_9606 0003735 0005840 9606 cgacucuuagcggcggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacaugaucaucgacacuucgaacgcacuugcggccccgggcccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>..........>>>..>...>>>....<<....>><<<<<<<<..>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]]..........)))..)...)))....((....))((((((((())))))))).................... EIF6-bound large subunit of the human ribosome; 5.8S ribosomal RNA 7ox7 A 81 2.6 RF02348 34478654 32630 agagtctctcagcugguacaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Target-bound SpCas9 complex with TRAC chimeric RNA-DNA guide; chimeric RNA-DNA guide 7ox8 A 84 2.75 RF02348 URS0002311A0C_32630 34478654 32630 ggagagucucucagcugguacaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. Target-bound SpCas9 complex with TRAC full RNA guide; sgRNA 7ox9 A 84 2.45 RF02348 URS00023119D1_32630 34478654 32630 ggggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. Target-bound SpCas9 complex with AAVS1 all-RNA guide; sgRNA 7oxa A 81 2.15 RF02348 34478654 32630 ggggccactagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagug ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). Target-bound SpCas9 complex with AAVS1 chimeric RNA-DNA guide; chimeric RNA-DNA guide 7ozz A 10 2.7 URS000080E158_32630 35821218 32630 caaagaaaag .......... .......... The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification; RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') 7p2e A 955 2.4 RF00177 URS0001A24B4C_9606 36480258 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin; 12S mitochondrial rRNA 7p7q A 2901 2.4 RF02540,RF02541,RF00002 URS0002335906_1351 35387982,30404935 0003735 0005840 1351 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaangguccuaagguagcgaaanuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccacauguacaggauagguaggagccgaugagaccggaacgcuaguuucggaggaggcgcuggugggauacuacccuuguguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccugnggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaac <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<...<.<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>>.>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<...<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.<...<<<<<<<<<.....<<<...<<<<<<<<...<<.<<<<.....>>>>..>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>>.......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<<<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<.........>>....>>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>...........<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>...>>>>....>>>>>>. (.((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).])).)))......).))..((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).))))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((...(..(((.........)))..).......(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((((.((((((....{{....))))))((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((.........))....)))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).)))).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).). E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume; 23S rRNA 7p7q B 114 2.4 RF00001 URS0000240630_1351 35387982,30404935 0003735 0005840 1351 gugguggcgauagcgagaaggauacaccuguucccaugccgaacacagaaguuaagcuucuuagcgccgauuguagugaaggguuucccuuugugagaguaggacgucgccacg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>..>>>>>>>>. ((((((((....((((((((.....((((((...(.....)...))))..))....)))))).)).((.......((((((((...)))))))).......))..)))))))). E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume; 5S rRNA 7p7q a 1521 2.4 RF00177,RF01959,RF01960 URS00023358DE_1351 35387982,30404935 0003735 0005840 1351 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccuucggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggnnggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<<....>>>>>>......>>.>.......<<<<<<<<<..>>>>>>>>>.......<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>....<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>......<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<.......<<<<<....>>>>>...<<<<<..>>>>>...>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).)........(((((((....)))))))........(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...(....(((((....)))))...(((((..))))))...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume; 16S rRNA 7p7r A 2901 2.9 RF02540,RF02541,RF00002 URS0002311A01_226185 35387982,30404935 0003735 0005840 226185 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccacauguacaggauagguaggagccgaugagaccggaacgcuaguuucggaggaggcgcuggugggauacuacccuuguguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccuggggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaac <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<.....<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<..<<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.<...<<<<<<<<<.....<<<...<<<<<<<<...<<<<<<<.....>>>>>.>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<..<...<<<<.......>>>>...>..........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<<<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<.........>>....>>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>...>>>>....>>>>>>. (.((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((..(.(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).])).)))......).))).((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).))))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((...(..(((.........)))..).......(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((((.((((((....{{....))))))((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((.........))....)))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).)))).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I; 23S rRNA 7p7r B 114 2.9 RF00001 URS00023358F1_226185 35387982,30404935 0003735 0005840 226185 gugguggcgauagcgagaaggauacaccuguucccaugccgaacacagaaguuaagcuucuuagcgccgauuguagugaaggguuucccuuugugagaguaggacgucgccacg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>..>>>>>>>>. ((((((((....((((((((.....((((((...(.....)...))))..))....)))))).)).((.......((((((((...)))))))).......))..)))))))). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I; 5S rRNA 7p7r a 1521 2.9 RF00177,RF01959,RF01960 URS00023358DE_226185 35387982,30404935 0003735 0005840 226185 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccuucggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<<....>>>>>>......>>.>.......<<<<<<<<....>>>>>>>>.......<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<.......<<<<<....>>>>>...<<<<<..>>>>>...>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).)........(((((((....)))))))........(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..(.((((((...(.....(((((((........))))))).....)....))))))....).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...(....(((((....)))))...(((((..))))))...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I; 16S rRNA 7p7s A 2901 3.0 RF02540,RF02541,RF00002 URS0002311A01_1351 35387982,30404935 0003735 0005840 1351 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccacauguacaggauagguaggagccgaugagaccggaacgcuaguuucggaggaggcgcuggugggauacuacccuuguguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccuggggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaac <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<.....<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<...<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.<...<<<<<<<<<.....<<<...<<.<<<<<...<<<<<<<.....>>>>>.>>...>>>>>.>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<......<<<.........>>>..............<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<<<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<.........>>....>>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>...>>>>....>>>>>>. (.((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((..(.(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).])).)))......).))).((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).))))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((...(..(((.........)))..).......(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((((.((((((....{{....))))))((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((.........))....)))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).)))).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II; 23S rRNA 7p7s B 114 3.0 RF00001 URS0000240630_1351 35387982,30404935 0003735 0005840 1351 gugguggcgauagcgagaaggauacaccuguucccaugccgaacacagaaguuaagcuucuuagcgccgauuguagugaaggguuucccuuugugagaguaggacgucgccacg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>..>>>>>>>>. ((((((((....((((((((.....((((((...(.....)...))))..))....)))))).)).((.......((((((((...)))))))).......))..)))))))). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II; 5S rRNA 7p7s a 1521 3.0 RF00177,RF01959,RF01960 URS00023358DE_1351 35387982,30404935 0003735 0005840 1351 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccuucggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<<....>>>>>>......>>.>.......<<<<<<<<....>>>>>>>>.......<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<.......<<<<<....>>>>>...<<<<....>>>>...>>.>>.<<<.<<<..<<<<<<.<.....<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.....>...>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<..<.<<<<<<<........>>>>>>>>...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).)........(((((((....)))))))........(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((.(...((........))......).)))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...(....(((((....)))))...(((((..))))))...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II; 16S rRNA 7p7t A 2901 2.9 RF02540,RF02541,RF00002 URS0002311A01_1351 35387982,30404935 0003735 0005840 1351 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccacauguacaggauagguaggagccgaugagaccggaacgcuaguuucggaggaggcgcuggugggauacuacccuuguguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccuggggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaac <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<.....<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>..<....<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<..<<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.<...<<<<<<<<<.....<<<...<<.<<<<<...<<<<<<<.....>>>>>.>>...>>>>>.>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<..<...<<<<.......>>>>...>..........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<<<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<.........>>....>>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>>.<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>.>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>...>>>>....>>>>>>. (.((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).])).)))......).))..((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).))))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((...(..(((.........)))..).......(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((((.((((((....{{....))))))((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((.........))....)))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).)))).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III; 23S rRNA 7p7t B 114 2.9 RF00001 URS0000240630_1351 35387982,30404935 0003735 0005840 1351 gugguggcgauagcgagaaggauacaccuguucccaugccgaacacagaaguuaagcuucuuagcgccgauuguagugaaggguuucccuuugugagaguaggacgucgccacg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>..>>>>>>>>. ((((((((....((((((((.....((((((...(.....)...))))..))....)))))).)).((.......((((((((...)))))))).......))..)))))))). PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III; 5S rRNA 7p7t a 1521 2.9 RF00177,RF01959,RF01960 URS00023358DE_1351 35387982,30404935 0003735 0005840 1351 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccuucggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<<....>>>>>>......>>.>.......<<<<<<<<....>>>>>>>>.......<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<.......<<<<<....>>>>>...<<<<<..>>>>>...>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).)........(((((((....)))))))........(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((...(.....(((((((........))))))).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((...(....(((((....)))))...(((((..))))))...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III; 16S rRNA 7p7u A 2824 3.1 RF02540,RF02541,RF00002 URS0002311A01_1351 35387982,30404935 0003735 0005840 1351 uuaagugaauaagggcgcacgguggaugccuuggcacuaggagccgaugaaggacgggacuaacaccgauaugcuuuggggagcuguaaguaagcuaugauccagagauuuccgaaugggggaacccaauaucuuuuauaggauauuacuuuucagugaauacauagcugauuagagguagacgcagagaacugaaacaucuuaguaccugcaggaagagaaagaaaauucgauucccugaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuuguugggguuguaggacuccgauaugguagucuguuaguauaguugaaggauuuggaaaauuccgcuaaagagggugaaagccccguagacgaaaugcugacaacaccuaggaggauccugaguacggcggaacacgagaaauuccgucggaauccgcggggaccaucccgcaaggcuaaauacucccuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagauccugaaaccgugugccuacaacaagucaaagcucguuaaugagugauggcgugccuuuuguagaaugaaccggcgaguuacgauugcaugcgagguuaagucgaagagacggagccgcagcgaaagcgagucugaauagggcgaaugaguauguagucguagacccgaaaccaugugaucuacccauguccagguugaaggugcgguaaaacgcacuggaggaccgaacccacguacguugaaaagugcggggaugagguguggguagcggagaaauuccaaacgaacuuggagauagcugguucucuccgaaauagcuuuagggcuagccucggaauugagaaugauggagguagagcacuguuuggacuaggggcccaucucggguuaccgaauucagauaaacuccgaaugccauucauuuauauccgggagucagacugcgagugauaagauccguagucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggaugugggguugcacagacaacuaggauguuggcuuagaagcagccaccauuuaaagagugcguaauagcucacuagucgagugacccugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggacuacaccauuagguguagugguaggagagcguucuaagggcguugaaggucgaucgugaggacggcuggagcgcuuagaagugagaaugccgguaugaguagcgaaagacaggugagaauccuguccaccguaugacuaagguuuccuggggaaggcucguccgcccaggguuagucgggaccuaagccgaggccgauaggcguaggcgauggacaacagguugauauuccuguaccaguuguuuuuguuugagcaauggagggacgcaguaggcuaaggaaugcaugcgauuggaagugcauguccaagcaaugagucuugaguagaguuaaaugcuuuacucuuuaaggacaaguugugacggggagcgaaauaguagcgaaguuccugacgucacacugccaagaaaagcuucuagugagaaaacaacugcccguaccguaaaccgacacagguagucgaggagaguauccuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcugacuucggucagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcaaaaucguaagaugaaguauaggggcugacgccugcccggugcuggaagguuaagaggauggguuagcuucggcgaagcucagaauugaagccccaguaaacggcggccguaacuauaacgguccuaagguagcgaaauuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaauuuuaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccauggagcuuuacuguaguuugauauugaguguuuguaccuguuaugaacccucuaacccgcaccacuaaucguggugggagacagugucagaugggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaaagguucccucagaaugguuggaaaucauucgaagaguguaaaggcagaagggagcuugacugcgagaccuacaagucgagcagggacgaaagucgggcuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuacccuggggauaacaggcuuaucucccccaagaguccacaucgacggggagguuuggcaccucgaugucggcucgucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgcgggcguuggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacuuaccgcugguguaccaguuguucugccaagggcauugcuggguagcuauguagggaagggauaaacgcugaaagcaucuaagugugaagcccaccucaagaugagauuucccauuucuuuaagaaaguaagaccccugagagaugaucagguagauagguuggaaguggaaggcuagugauaguuggagcggaccaauacuaaucggucgaggacuuaac <<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<..<<<<<.........>>>>>..>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<..>>>>>>>......<<<<<<<<.....<<<.<<.<<<<<<<<<.<<<...<<<.<......>.>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>..>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<..<<<<.<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>.>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.<...<<<<<<<<<.....<<<...<<<<<<<<...<<<<<<<.....>>>>>.>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<....>>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<......<<...<<<<....<<<<..<<...<<<<<.<<<<<<...(((....>>>>>><<..<<<<<..<<<<.<<<<<<<<<.....>>>>>>>>>.....>>>>..>>>>>...>>...<<.........>>....>>>>>....>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<<.<<....>>..>>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<.....>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<.....<<<<....>>>>....>>...>>>>>.>>>...>>>>....>>>>>>. (.((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).((..(((((.........)))))..)).))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((((((())))))))....{.((((((((.....(((.((.(((((((((.(((...(((.(......).)))[[(...).(((.....]])))...)))...))))))))))))))..))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((..(.(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))......)))))))))))))..((.(...(((.((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).])).)))......).))).((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((.((((.....))))..))...))))))))..)).).....)))).))))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((...(..(((.........)))..).......(...((......)).).)))))...)))))))))).))...........]]].)...))))))))))...)))))))((((((((....))))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((((((((......((...((((....((((..(((..(((((.((((((....{{....))))))((..(((((..((((.(((((((((.....))))))))).....))))..)))))...))...((.........))....)))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((......)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.(((((((.(.).))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((.....))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...))))).). E. faecalis 70S ribosome with P-tRNA, state IV; 23S rRNA 7p7u B 114 3.1 RF00001 URS0000240630_1351 35387982,30404935 0003735 0005840 1351 gugguggcgauagcgagaaggauacaccuguucccaugccgaacacagaaguuaagcuucuuagcgccgauuguagugaaggguuucccuuugugagaguaggacgucgccacg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>..>>>>>>>>. ((((((((....((((((((.....((((((...(.....)...))))..))....)))))).)).((.......((((((((...)))))))).......))..)))))))). E. faecalis 70S ribosome with P-tRNA, state IV; 5S rRNA 7p7u a 1521 3.1 RF00177,RF01959,RF01960 URS00023358DE_1351 35387982,30404935 0003735 0005840 1351 gagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgaacgcuucuuaagaggaguggcggacgggugaguaacacguggguaaccuacccaucagagggggauaacacuuggaaacaggugcuaauaccgcauaacaguuuaugccgcauggcauaagagugaaaggcgcuggugucgcugauggauggacccgcggugcauuagcuaguuggugagguaacggcucaccaaggccacgaugcauagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuucggcaauggacgaaagucugaccgagcaacgccgcgugagugaagaagguuuucggaucguaaaacucuguuguuagagaagaacaaggacguuaguaacugaacguccccugacgguaucuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggauuuauugggcguaaagcgagcgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacugggagacuugagugcagaagaggagaguggaauuccauguguagcggugaaaugcguagauauauggaggaacaccaguggcgaaggcggcucucuggucuguaacugacgcugaggcucgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuggaggguuuccgcccuucagugcugcagcaaacgcauuaagcacuccgccuggggaguacgaccgcaagguugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccuuugaccacucuagagauagagcuuucccuucggggacaaagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuauuguuaguugccaucauuuaguugggcacucuagcgagacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaaugggaaguacaacgagucgcuagaccgcgaggucaugcaaaucucuuaaagcuucucucaguucggauugcaggcugcaacucgccugcaugaagccggaaucgcuaguaaucgcggaucagcacgccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuuggagccagccgccuaaggugggauagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ..<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<<<<....>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<<....>>>>>>......>>.>.......<<<<<<<<....>>>>>>>>.......<<<<<..>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<........>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<<..<<<......>>>.....>>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<<....>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<.......<<<<<....>>>>>...<<<<<..>>>>>...>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<...<<.<<<<..<<<..<<.....>>.>>>.>>>>.>>..>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ..((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..(..((((....))))..))))......(((.......(((((((..((...(((((((.(.((.....((((((....))))))......)).)........(((((((....)))))))........(((((()))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..(.((((((...(.....(((((((........))))))).....)....))))))....).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((((....)))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))........(.(((((((..(...(((...(....(((((....)))))...(((((..))))))...).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....))))))))..)).)))))))).(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..((.....)).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... E. faecalis 70S ribosome with P-tRNA, state IV; 16S rRNA 7pnt A 909 3.19 RF02542 URS00023359BC_10090 35676484 0003735 0005840 10090 aaagguuugguccuggccuuauaauuaauuagagguaaaauuacacaugcaaaccuccauagaccgguguaaaaucccuuaaacauuuacuuaaaauuuaaggagaggguaucaagcacauuaaaauagcuuaagacaccuugccuagccacacccccacgggacucagcagugauaaauauuaagcaauaaacgaaaguuugacuaaguuauaccucuuaggguugguaaauuucgugccagccaccgcggucauacgauuaacccaaacuaauuaucuucggcguaaaacgugucaacuauaaauaaauaaauagaauuaaaauccaacuuauaugugaaaauucauuguuaggaccuaaacucaauaacgaaaguaauucuagucauuuauaauacacgacagcuaagacccaaacugggauuagauaccccacuaugcuuagccauaaaccuaaauaauuaaauuuaacaaaacuauuugccagagaacuacuagccauagcuuaaaacucaaaggacuuggcgguacuuuauauccaucuagaggagccuguucuauaaucgauaaaccccgcucuaccucaccaucucuugcuaauucagccuauauaccgccaucuucagcaaacccuaaaaagguauuaaaguaagcaaaagaaucaaacauaaaaacguuaggucaagguguagccaaugaaaugggaagaaaugggcuacauuuucuuauaaaagaacauuacuauacccuuuaugaaacuaaaggacuaaggaggauuuaguaguaaauuaagaauagagagcuuaauugaauugagcaaugaaguacgcacaccccuccuaaauuaaacuuaacauaauuaauuucuacguuuauggagauaaaagcauacugagugugcuuggaau ..((((..<<<<<<.)))).<<<<<<<.<..<<<<<<<<....<<<.<<<..<......>......<<......<<<<<<<<<..<<<....>>>.>>>>>>>.>>.<<<....<<...<<....>>..>>......>>>..<<...>>.>>.<<<....>>>.....>>>>>>..........<<....<<<<....>>>>..>>...>>.>>>>>>...<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>.>>>>>>>....<<<((.....<<<<....<<............<<<<<<....<<<<<<<....<<......>>.....>>>.>>>..>..........<<....>>.>>>>>>......>>....>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<.<<.......))..>>.>>>>.>>>.<<<.......<<<....>>>.....>>>..>>>>>>.<<<<...<<<<........<<<<<..<<<<<<<<<<.....<<........>>..........<<<<.<<...........<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>....>>.>>>>..>>.>>>>>>>>.....<<<<<....>>>>>.....<<..<.<<<<<<......>>>>>>..>.>>.....>>>>>.....<<<<<<<.........>>>>>>>............>>>>..>>>.>....<<<<<<<<<..........<<.....>>......>>>>>.>>>>....<<<<<<<<<.>>>>>>>>>..... [.[[[[..(((((..]]]]](((((((.(..((((((((..(.(((.(((..(......)......(((.....(((((((((..((((..)))).))))))).)).(((....((...((....))..))......)))..((...))))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...((((([[[.....(((.....((.]]])).......)))..)))))..).)))))))....((([[...(.((((....((............(((((((....((((((....(........).....))).))).....).......((....)).))))))......))....))))....((((((...((...((((.........))))...))))))))......{...((((.((.......]]..)).)))))))).(((.......(((....))).....)))...)))))(((.(...(((((...((..(((((..((((((((((.....((........))........(.((((.((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)).))))).)).)))))))).(...(((((....))))).....(.....((((((......)))))).....)..)..))))).....(((((((.........))))))).....).)...)))))..).).))...(((((((((..........((.....))......))))).))))....(((((((((.)))))))))}.... Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Tfb1m; 12S mitochondrial rRNA 7pnu A 941 3.06 RF02542 URS00023359BC_10090 35676484 0003735 0005840 10090 aaagguuugguccuggccuuauaauuaauuagagguaaaauuacacaugcaaaccuccauagaccgguguaaaaucccuuaaacauuuacuuaaaauuuaaggagaggguaucaagcacauuaaaauagcuuaagacaccuugccuagccacacccccacgggacucagcagugauaaauauuaagcaauaaacgaaaguuugacuaaguuauaccucuuaggguugguaaauuucgugccagccaccgcggucauacgauuaacccaaacuaauuaucuucggcguaaaacgugucaacuauaaauaaauaaauagaauuaaaauccaacuuauaugugaaaauucauuguuaggaccuaaacucaauaacgaaaguaauucuagucauuuauaauacacgacagcuaagacccaaacugggauuagauaccccacuaugcuuagccauaaaccuaaauaauuaaauuuaacaaaacuauuugccagagaacuacuagccauagcuuaaaacucaaaggacuuggcgguacuuuauauccaucuagaggagccuguucuauaaucgauaaaccccgcucuaccucaccaucucuugcuaauucagccuauauaccgccaucuucagcaaacccuaaaaagguauuaaaguaagcaaaagaaucaaacauaaaaacguuaggucaagguguagccaaugaaaugggaagaaaugggcuacauuuucuuauaaaagaacauuacuauacccuuuaugaaacuaaaggacuaaggaggauuuaguaguaaauuaagaauagagagcuuaauugaauugagcaaugaaguacgcacacccgucacccuccucaaauuaaauuaaacuuaacauaauuaauuucuagacauccguuuaugagaggagauaagucguguaagcauacuggaaagugugcuuggaau ..((((..<<<<<<.)))).<<<<<<<.<..<<<<<<<<..<.<<<.<<<..<......>......<<......<<<<<<<<<..<<<....>>>.>>>>>>>.>>.<<<....<<...<<....>>..>>......>>>..<<...>>.>>.<<<....>>>.....>>>>>>>.........<<....<<<<....>>>>..>>...>>.>>>>>>...<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>.>>>>>>>....<<<((.....<<<<....<<............<<<<<<....<<<<<<<....<<......>>.....>>>.>>>..>..........<<....>>.>>>>>>......>>....>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<.<<.......))..>>.>>>>.>>>.<<<.......<<<....>>>.....>>>..>>>>>><<<<<.<<<<<<........<<<<<..<<<<<<<<<<.....<<........>>..........<<<<.<<...........<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>....>>.>>>>..>>.>>>>>>>>.....<<<<<....>>>>>.....<<..<.<<<<<<......>>>>>>..>.>>.....>>>>>.....<<<<<<<.........>>>>>>>............>>>>>>>>>.>>..<<.<...<<<<<<....<<<<<....<<....<<.....>>....>>......>>>>>...>>>>>>....>.>>...<<<<<<<<<....>>>>>>>>>..... [.[[[[..(((((..]]]]](((((((.(..((((((((..(.(((.(((..(......)......(((.....(((((((((..(((....))).))))))).)).(((....((...((....))..))......)))..((...))))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...((((([[[.....(((.....((.]]])).......)))..)))))..).)))))))....((([[...(.((((....((............(((((((....((((((....(........).....))).))).....).....(.((....)))))))))......))....))))....((((((...((...((((.........))))...))))))))......{...((((.((.......]]..)).)))))))).(((.......(((....))).....)))...)))))(((((.((((((((..((..(((((..((((((((((.....((........))..........((((.((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)).))))..)).)))))))).(...(((((....))))).....(.....((((((......)))))).....)..)..))))).....(((((((.........))))))).....).)..))))))))))).))..((.(...((((((....(((((....((....((.....))....))......)))))...))))))....).))...(((((((((....)))))))))}.... Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA inward conformation; 12S mitochondrial rRNA 7pnv A 951 3.06 RF02542 URS00023359BC_10090 35676484 0003735 0005840 10090 aaagguuugguccuggccuuauaauuaauuagagguaaaauuacacaugcaaaccuccauagaccgguguaaaaucccuuaaacauuuacuuaaaauuuaaggagaggguaucaagcacauuaaaauagcuuaagacaccuugccuagccacacccccacgggacucagcagugauaaauauuaagcaauaaacgaaaguuugacuaaguuauaccucuuaggguugguaaauuucgugccagccaccgcggucauacgauuaacccaaacuaauuaucuucggcguaaaacgugucaacuauaaauaaauaaauagaauuaaaauccaacuuauaugugaaaauucauuguuaggaccuaaacucaauaacgaaaguaauucuagucauuuauaauacacgacagcuaagacccaaacugggauuagauaccccacuaugcuuagccauaaaccuaaauaauuaauuaacaaaacuauuugccagagaacuacuagccauagcuuaaaacucaaaggacuuggcgguacuuuauauccaucuagaggagccuguucuauaaucgauaaaccccgcucuaccucaccaucucuugcuaauucagccuauauaccgccaucuucagcaaacccuaaaaagguauuaaaguaagcaaaagaaucaaacauaaaaacguuaggucaagguguagccaaugaaaugggaagaaaugggcuacauuuucuuauaaaagaacauuacuauacccuuuaugaaacuaaaggacuaaggaggauuuaguaguaaauuaagaauagagagcuuaauugaauugagcaaugaaguacgcacacaccgncngucacccuccucaaauuaaauuaaacuuaacauaauuaauuucuagacauccguuuaugagaggagauaagucguaacaagguaagcauacuggnnagugugcuuggaaua ..((((..<<<<<<.)))).<<<<<<<.<..<<<<<<<<..<.<<<.<<<..<......>......<<......<<<<<<<<<..<<<<..>>>>.>>>>>>>.>>.<<<....<<...<<....>>..>>......>>>..<<...>>.>>.<<<....>>>.....>>>>>>>.........<<....<<<<....>>>>..>>...>>.>>>>>>...<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>.>>>>>>>....<<<((.....<<<<....<<............<<<<<<....<<<<<<<....<<......>>.....>>>.>>>..>..........<<....>>.>>>>>>......>>....>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<.<<.....))..>>.>>>>.>>>.<<<.......<<<....>>>.....>>>..>>>>>><<<<<.<<<<<<........<<<<<..<<<<<<<<<<.....<<........>>..........<<<<.<<...........<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>....>>.>>>>..>>.>>>>>>>>.....<<<<<....>>>>>.....<<..<.<<<<<<......>>>>>>..>.>>.....>>>>>.....<<<<<<<.........>>>>>>>............>>>>>>>>>.>>....<..<<.<...<<<<<<..<.<<<<<....<<....<<.....>>....>>......>>>>>>..>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>...... [.[[[[..(((((..]]]]](((((((.(..((((((((..(.(((.(((..(......)......(((.....(((((((((..(((....))).))))))).)).(((....((...((....))..))......)))..((...))))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...((((([[[.....(((.....((.]]])).......)))..)))))..).)))))))....((([[...(.((((....((............(((((((....((((((....(........).....))).))).....).....(.((....)))))))))......))....))))....((((((...((...((((.........))))...))))))))......{...((((.((.....]]..)).)))))))).(((.......(((....))).....)))...)))))(((((.(((((((...((..(((((..((((((((((.....((........))..........((((.((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)).))))..)).)))))))).(...(((((....))))).....(.....((((((......)))))).....)..)..))))).....(((((((.........))))))).....).)...)))))))))).))..(.(..((.(...((((((....(((((....((....((.....))....))......)))))...))))))....).))...)..)..(((((((((....)))))))))}..... Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Mettl15; 12S mitochondrial rRNA 7pnw A 954 3.09 RF02542 URS00023359BC_10090 35676484 0003735 0005840 10090 aaagguuugguccuggccuuauaauuaauuagagguaaaauuacacaugcaaaccuccauagaccgguguaaaaucccuuaaacauuuacuuaaaauuuaaggagaggguaucaagcacauuaaaauagcuuaagacaccuugccuagccacacccccacgggacucagcagugauaaauauuaagcaauaaacgaaaguuugacuaaguuauaccucuuaggguugguaaauuucgugccagccaccgcggucauacgauuaacccaaacuaauuaucuucggcguaaaacgugucaacuauaaauaaauaaauagaauuaaaauccaacuuauaugugaaaauucauuguuaggaccuaaacucaauaacgaaaguaauucuagucauuuauaauacacgacagcuaagacccaaacugggauuagauaccccacuaugcuuagccauaaaccuaaauaauuaauuaacaaaacuauuugccagagaacuacuagccauagcuuaaaacucaaaggacuuggcgguacuuuauauccaucuagaggagccuguucuauaaucgauaaaccccgcucuaccucaccaucucuugcuaauucagccuauauaccgccaucuucagcaaacccuaaaaagguauuaaaguaagcaaaagaaucaaacauaaaaacguuaggucaagguguagccaaugaaaugggaagaaaugggcuacauuuucuuauaaaagaacauuacuauacccuuuaugaaacuaaaggacuaaggaggauuuaguaguaaauuaagaauagagagcuuaauugaauugagcaaugaaguacgcacacaccgncngucacccuccucaaauuaaauuaaacuuaacauaauuaauuucuagacauccguuuaugagaggagauaagucguaacaagguaagcauacuggnnagugugcuuggaauaauc ..((((..<<<<<<.)))).<<<<<<<.<..<<<<<<<<..<.<<<.<<<..<......>......<<......<<<<<<<<<..<<<<..>>>>.>>>>>>>.>>.<<<....<<...<<....>>..>>......>>>..<<...>>.>>.<<<....>>>.....>>>>>>>.........<<....<<<<....>>>>..>>...>>.>>>>>>...<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>.>>>>>>>....<<<((.....<<<<....<<............<<<<<<....<<<<<<<....<<......>>.....>>>.>>>..>..........<<....>>.>>>>>>......>>....>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<.<<.....))..>>.>>>>.>>>.<<<.......<<<....>>>.....>>>..>>>>>><<<<<.<<<<<<....<...<<<<<..<<<<<<<<<<.....<<........>>..........<<<<.<<...........<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>....>>.>>>>..>>.>>>>>>>>.....<<<<<....>>>>>.....<<..<.<<<<<<......>>>>>>..>.>>.....>>>>>.....<<<<<<<.........>>>>>>>.......>....>>>>>>>>>.>>....<..<<.<...<<<<<<..<.<<<<<....<<....<<.....>>....>>......>>>>>>..>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]](((((((.(..((((((((..(.(((.(((..(......)......(((.....(((((((((..(((....))).))))))).)).(((....((...((....))..))......)))..((...))))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...((((([[[.....(((.....((.]]])).......)))..)))))..).)))))))....((([[...(.((((....((............(((((((....((((((....(........).....))).))).....).....(.((....)))))))))......))....))))....((((((...((...((((.........))))...))))))))......{...((((.((.....]]..)).)))))))).(((.......(((....))).....)))...)))))(((((.(((((((...((..(((((..((((((((((.....((........))........(.((((.((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)).))))).)).)))))))).(...(((((....))))).....(.....((((((......)))))).....)..)..))))).....(((((((.........))))))).....).)...)))))))))).))..(.(..((.(...((((((....(((((....((....((.....))....))......)))))...))))))....).))...)..)..(((((((((....)))))))))}........ Mouse mitochondrial ribosome small subunit lacking m5U modification; 12S mitochondrial rRNA 7pnx A 951 2.76 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacg ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..(...(((....((.....))...)))....)..))))).))))))....).))...)..)..(((((((((....)))))))))}.... Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a; 12S mitochondrial rRNA 7pny A 951 3.06 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacg ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<<<<<......>>>>.>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((((((......)))).))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..(...(((....((.....))...)))....)..))))).))))))....).))...)..)..(((((((((....)))))))))}.... Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b; 12S mitochondrial rRNA 7pnz A 951 3.09 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacg ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..(...(((....((.....))...)))....)..))))).))))))....).))...)..)..(((((((((....)))))))))}.... Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c; 12S mitochondrial rRNA 7po0 A 951 2.9 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacg ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..(...(((....((.....))...)))....)..))))).))))))....).))...)..)..(((((((((....)))))))))}.... Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3; 12S mitochondrial rRNA 7po1 A 955 2.92 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<....<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>....>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Initiation complex of human mitochondrial ribosome small subunit with IF3; 12S mitochondrial rRNA 7po2 A 955 3.09 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA; 12S mitochondrial rRNA 7po3 A 955 2.92 RF00177 URS0001A24B4C_9606 35676484 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.<.....<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.....>...>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome small subunit; 12S mitochondrial rRNA 7po4 A 1145 2.56 RF02541,RF02540 URS00021ED93A_9606 35676484 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaaugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagacccuauggagcuuuaauuuauuaaugcaaacaguaccaaaccugcauuaaaagcaguacaugcuaagacuucaccagucaaagcgaacuauccaauaacuugaccaacggaacaaguuacccuaggcuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuuccccuaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<..<<<<<.<.....<<<<<.<<<..<<.......>>....>>>.>>>>>...<<.......>>......>.>>>>...>..>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<...................<<<.........>>>............<<<......>>>......................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<.<<.....>>.>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.......<<...<<<<<.....>>>>>...<<<<<<.............>>>>>>.......>>...>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.......<<<.<.<<<<........<<<<<<<<....<..>......>>>>>>>>...........<<<..<<<<.....>>>>..>>>........<<<....>>>............>>>>...>>>>....>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>.....<<.<............>.>>.......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).{.(.(..[...{.).).((((((..(......(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....).))..).))).))))).(.((.......))...)..).))))......).))).((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((....].)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......)))).....................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....((...(((((.....)))))...((((((.............)))))).......))..))).))))))).)))).)).....)).[..(((((..}..}].))))).......((..(((......((.(.((.(.(........((((((((.....().......))))))))...........((...(((....[..)))...))........(((....)))......].....).)...))).))...))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))....(((................)))......).........(((((.......))))..). Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP); 16SrRNA 7ps8 A 23 NA URS00026813DD_587638 587638 cagggagguguggccugggcggg ....................... ....................... NMR Structure of the U3 RNA G-quadruplex; RNA (5'-R(*CP*AP*GP*GP*GP*AP*GP*GP*UP*GP*UP*GP*GP*CP*CP*UP*GP*GP*GP*CP*GP*GP*G)-3') 7pwf 2 1355 2.85 RF01960,RF01959,RF00177 URS00023358C0_184922 35100413 0003735 0005840 184922 auccggucgauccugccggagcgcgacgcucuccccaaggacgaagccaugcaugccucaggacgcggcggacggcucnggacaacgguugcaccncccguggcggucgccggacaccgcuggcaacccggcgccaagacgugcgcgcaagggcgggccccgggcgagcagcgugacgcagcgacggcccgcccgggcuuccggggcaucacccggucggcgcggucgcggcgcgccgagggcccgacgccuggcggagaaucaggguucgacuccggagagcgggccugcgagacggcccgcacauccaaggacggcagcaggcgcggnacuugcccaaugcgcggcgcgcngcggcgcgacggggugcgcgcgagucaggcgggcccaccccgacccgccagggcaaggcuggugccagcagccgcgguaauuccagcucggcgagcgucgcgcggcgcugcugcaguugaaacgcccguaguuggccccccgccgccacgaggaaacgggagcgcuccaggcagguuggacccgccgcgugggaccgcggcgggcccggcgcgccgcggcagccccgaggagagcgggcgggggcaccgguaccggccggggacgggugaaacaggaugaucccgccgagaccgccggccgcgcaggcgccugccaagaccgccucugucaaucaagggcgaaggccgggggcuagaaggcgaucagacaccaccguauucccggccguaaacggugccgccccgcggccggcgcgcgucccgccggccgcccagggaaaccgggaggcuccgggcucuggggggaguauggccgcaangcugaaacuugaaggcauugacggagggguacaccagacguggagucugcggcucaaucugacncaacgcgcgcaccucaccaggcccgcgcggugnugcauggccgcucccagcccgugncgcgagccgugcuccauugcgacaacgagcgagaccccggccgcgggccgcgggacggcccgcagcgggaggacggcggggcgauagcaggucugugaugcccuccgcccugggccgcacgcgcgcuacacuggcggggccagccggcgcccgcgaggacgcgagcccccgccguggccgggaccgcgggcuggaacgcccccgcgcaccagnaaugucuuguaggcgcccgcccccaccgcgcgccggacgcgucccugccccunguacacaccgnccgucgcuccuaccgacugggcgcugcggcgagcgccccggacgggaagggccgcgagccccngcgccuggaggaaggagaagucguaacaagguaucnguaggugnnccugcggauggaucccu ..<<<<<.[..(((>>>>>.<<<<<<<<<..<<<....<......<<<.<<<..<<<.........>>>......<<........<<<..<<..<<...<<<<<......<<.....<<<<<<....>>>>>>......>>.....<<....<<<....[..<.....>..>>>...>>.......>.>>>>..>>>>..>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>...<<<<<<<<....>>>>...>>>>.>>.<<<<<<..........>>>>>>.<.<<<..>>>.>...>>>>>>.........<<<....<<<...>>>..>>>..>.....>>>..........<<<.<<.........>>.>>>..<<<.<(((...<<<<<.....<<.)))>>.......>>>>>>.>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.......<<<.<<<<<<.......<<..<<.......>>........>>.....>>>>>..>.>>><<.<<<...]...>>>...>>..........<<<<<<<.....<<<<..<<..<<<<<.<<<..<.<......>.>.....>>>.>>>>.>.>>.......<<....>>...>>>>....>>>>.>>>...>>>...>>>>...<<<<<<<<...<...<<.<.<.....>.>.>>...>>>>>>>>>.........<<<.<<..<<<<<<<<<<.<...>.>>>>>>>>>>...<<..))>>....>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))..]<<<<<.<<<<<<<.<<.<<<<<<..<<<.<<<<<<......<<........>>.........<<<<<.<.....<<.<<<..<<.<<<<<<....<<.<<<<<<....>>>..<<......>>....>>>.>>....<<<<<.<<<<<<.>>>>>>.....<<<<<.>>>>>.......>>>>>....>>>.>>>.....>>>>>>>..>.>>>>>...>>.>>>>.>>>.....<<<<<<<.......<<<.<<....>>.>>>....>>>>>>>......<....<<.<<<<......>>>>.>>....>.....>>>>>>....<<<<<.<<.......>>.>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<<.<<<..<<<.<<<.........>>>.>>>..>>>.>>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ ..((((..[..[[..)))).(((((((((...((....((.....(((.(((..(((.(.....).)))......(((.......(((..((..((...(.((.......(......(((.((....)).))).......).....((....(((.......(.....)..)))...)).........)).)..))))..))).(((....(((..((((((((.......)))))))))))......)))...(((.(((......)))....)))))).((((((..........)))))).(.((....)).)...)))))).).......(((....((((.))))..)))..).....))...........(((.((.........)).)))..(((..[[....(((((.....((..]])).......)))))..)))..)))))))))...[......((([[...(.((((...(((.......(((.((((((.(.....((..((.......))........))..)..)))))..).))).((.((.......))..).)..........((((((((.(...((((..((...((((.((...(..........)......)).))))...)).......((....))...))))..).)))).)))..))))...))))....((((((....(...((.(.........).))...).))))))......{...(((.((..((((((((((.(...).))))))))))...((..]]))....))...].))))))).(((......(((......)))....)))...]]..](((((.(((((((.((..(((((..(((.((((((......((........)).........(((((.(.....((.(((...(.((.(((....((.((((((....)))..((......))....))).))....(((((.((((((.))))))..(..(((((.))))).....).)))))....)))..)).....).)))))..).)))))...)).)))).))).(...(((((((.......(((.((....)).)))....)))))))......(....((.((((......)))).))....)..)..))))).....(((((.((.......)).)))))......))...)))))))))).))..(.(..((.(.(((((.((..(.((((((((.(((..(((.(((...(.)...))).)))..))).)))))))))..)).)))))..).))...)..)..(((((((((....)))))))))}....... Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolution; rRNA 18S 7pwg 1 2450 2.75 RF02543,RF02540 URS00023358CC_184922 35100413 0003735 0005840 184922 cggcccgaggcggcgggggcgacgggcggaacuuaagcauaucagnacgccccggaggagaaaccaaccgggauuccccguagcggcgagcgacgcgggaggagcccgccccgaaggcgcgcugugggcgccgcgagggggcccgagggccccgcccgagagggugcaagccccguacggcgggcgaguagcgcugcuugagcgugcagcgcgaagggaggcgcggcccuuccaaggcuaaauacgccccgggaccgauagcggaccaaguagcgcgancgaacggugaaaaggacgcccggccgcucaaaagaccugaacccggccggcgccggcccgccggccccnucucganacncggaccgaggagccacgcgccgcggcgagcccgagggccccgcggcggagcgagcgcgagacgccccgggcccgccgcgccccugcgggcgugcgcgggccgagccgcggcgcgugggcccganaggcggugaucuaugcccggcgagggcgaggccgggcgaaagccugguggaggcccgccgcggugcugacgcgcagaucgcucgucggagccgggcauggnggcgaaagacucaucgaaccgccugguagcugguugccuccgaaaugucucccaggacagccgccgcccgcaguugcggcccguagagcgcuggccggcggccgccccccaaacuccgaagggccgcgccgccccgcccuggccugggcggggcgggcgaaugcgggcggcgcgugggccccuccugguaagcaggacgggcgaggcgggacgauccggacgccgggccagggugcgccgccggggccggaacggcgucggccgcggccggcccggaaaauggagcgcgccggagccccggacccgcgcccggccgccgcgcgcggcggguaggaggccgcagaggccccgggggcgaaggcggcgcgcaggccccgccggaccggccucuggugcanaucucggcagcaguagcgcuacuccgcgccccggaggacugagggggagacggguuccgcggcgccugcaucuggccgcggnugacucgggccuaagcggcgggugaagaccgggaaggggcgugcccgcccgucgaacggggagccggcggagacuccggcaggcgcgggcggagacgcgccccccggcgacgcgcacggggaccgcggcgggcggcgccccggcccgcgaacgccccgcagcccccggacgccuugcgcggagaggggggcccgggggcggaccgcgcguccccggccgccccugaaaagccggggggcccgcgcgccguaccgaccgcacaggacuccggggucagcagccucuagcgcgggagcgaacncggcucagggaagucggcaagccggcuccguaaccucgggaaaaggaguggcucugacggggucagaacuggaacggacgcggggaucccgacuguuuacuagaaacacagcgucgcgagggccgcacccggcgcuggcgcgacgugauuucugccnagugccagaccgucaccgugaagcgauccgccgaagcccugguaaacggcgggaguaaugacucucuuaagguagcnaanugccucnucgggcaauuuccgacggcaugaauggaccaacgaggaucccacugunccgagccgcgccuccgcgagccuccagccucgggaacgggcgagggccggccagcggngcaagaagacccunnugagcuugacnccagcccgggccuguggggcggggccgccccgcucacccggucgcgcggggacccgcccgggcggggaguucggcugnggcggcgcgccugcuacaccggaccgcaggcnucccacggcgggcucagcgaggacccucccgcggagcagaagggcacaagcccgcccgacccgcgccccccgugccggcgcgggccgcgaaagcggggccuaccgauccuucgccgccccggccgcgggcgcggagguggcagaaaaguuaccacagngauaacuggcuuguggccgccgagcgcccgcagcgacgcggcuuuuugauccuungaugucggcucuuccuaccguccgcgcgcaccggcgcggaagcgucggauuguucacccguucaagggaucgugagcuggguuuagancgucgugagacgguuaguuuuacccuacuggccccggggccagagcacggcgggccaguacggaggaacgcccgccgcgggcgcccagccccgcgguugcccgccggggcaggaccgcgcgcccgggcccgggggccuggcgcugccgccucuaaagcgccaccccccccuccggccccgccgcccgcgccccagccccgugcccccugcccgaggcggcccccgcccgggaggaccacccggcgcggcgccccuguacggcgagggcgcguucgcccggggggcgcgccgcgggcgcg ......................<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<....<<.....>>.....>>>>>..[[[...<<<<...........>>>><<<<.....<<<<<......>>>>>((......<<<.....))>>>....>>>>........<<<<<<<........>>>>>>>...(((((..<<<<<<)))))..]]]..................................<<....>>................<<<.>>>...........................<<<<<<..>>>>>>.<<<<........>>>>.<<<<<....<<<<<<<<<<<<<..<<<...<<<.>>>..>>>...<<....>>............<<<<<<<<<<<<<....>>>>>>>.>>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<<<<<.<<<<<<<<<...<<<...<<<..<<<<..>>>>..>>>..>>.>...>>>>>>>.<<<<<<<<<<<......>>>>>>>>>>>...>>>>>>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((...<<<<<<<.....<<<.<<<<<<<..>>>>>>>>>>..........)))......>>>>>>>>>>>..>>>>>>><<<<<....>>>>>....>>>>>><<<<<<<<<<...<<......<<<<<.<<....>>.>>>>>...>>>>>>>>>>.>>.....>>>>>.<<.....<<....<<<<<.....>>>>>..<<.....<<<<..<<...<<<<<<...<.......>.>>>>>>....((<<<.<<...<<<...<<<....>>>......<<<<..>>>>...>>.>....>>...<<<<<........>>>>>))<<<<<<<<<....>>><<<<<<<<<<...<<<..<<<<<<<<<<<<<<<<<.........>>>>>....<<<<<<...<<<<<<....<<.....>>......>>>>>>...>>>>>>..>>>>>.>>>>>>>..>>>.........>>>>>>>>>>>>>>>>.>>>..>>..<<.....>>.>>>>.<<<<.....>>>>..>>....<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<...>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<<...<<....<<<.<....>.>>>....>>.>>>>>..>>>>><<<<<<....>>>>>>........<...........<<<<<<.....>>>>>>....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>....>>....<<<<<........>>>>>...((((((..{{{.........{{{..{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<..>>>>>>>>>...<<<<......>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<.<<<<..>>>>.>.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>>>>>.<<<....>>>.>>))).......(((((.(((((.>>>>>>))))))))))..........]]]]..}}.}}}.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<.........>>>....>>>>>..>...>>>.>>....<<<<<<<....>>>>>>>........}}}.))))))..<<<<<<.<<<..<<<<<<<<..............>>>>>>>><<<<<...<.<....<<<<<<<<<<....>>>>>..>>>>>....>.>.>>>>>.<<<...<<<<<<...........>>>>>>...>>>..>>>.>>>>>>...<.<<<.............................>>>.>...<<.<<<<.......>>>>..<<<<<<<<<<<....<<<<<<.<..>.>>>>>>...>>>>.>>>>>>>....>>. ......................((((((.....(...[..)......))))).).........((....))...((((....((.]...)).....))))...((((..(((..((...)....))))((((.....(((((......)))))[[(...).(((.....]])))....))))...)....(((((((........)))))))...(((((..[[[[[[)))))..)))..................................((....))............(...(((.)))...........)...............((((((..))))))[((((........)))).(((((..(.(((((((((((((..((....(((.)))...))...((....))....(......)(((((((...(((....)))...).))))))...)))))))))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))....))))))))).(.((.......))...)..))))))......).))).((((((....(((((....)))))(((((((((((((.(((((((((...(((...((...((((()))))...))..)).)...))))))).((.((((((((......)))))))).))...))))))))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(((((((.....(((.(((((((()))))))))))..........]]]......))))))))))...)))))))(((((....)))))....))))))(.((((((((...((......(((((.((....)).)))))...))))))))))..).....))))).((.....((....(((((.....)))))..((.....((.(..((...((((((...(.......).))))))....[[(((.((...(((...(((....))).(....((((..)))).).)).)....))...(((((........)))))]](((((((((....)))((((((((((...(((..(((((((((((((((((...{.{...)))))....((((((...((((((....((.....))......))))))...))))))..))))).)))))))..)))(...)....)))))))))))))))).)))..))..((.....)).).)).((((.....))))..))....((((....((((((((.((..(....(.......(((((....(.{..).....)))))((.((((((...)))))).))(...).......(((((((((.].((.........))...(((((((....((((....))))......))))))).}.(((.(((..(((((((...((....(((.(....).)))....)).)))))..)))))(((((......)))))........((..........(((((.......))))).)..)....)))....)).))))))).)..))).)))))))).))))))....))....(((((.....]..)))))...((((((..(((.((......(((..((((((..(((((.((((((((..(((((((((..)))))))))...((((......)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.(.((((..)))).)...).((][.[[[))....))))))).(.((((((((.....{...)))))))))(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....)}....))))..)).))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(((((((((......))))))..))).(((.(.....).)))....)))))..)...))).).....(((((((....)))))))..>.))..))).))))))..(((((..(((..((((((((.....(...)....))))))))(((((...(.(....((((.(((((}.}.)))))...))))....).).))))).(((....((((.............))))....)))..)))..)))))(..(.(((.............................))).)..)((.((((.......))))..(((((((((((....(((((..(())..)))))...)))).)))))))....)). Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution; rRNA 28S 7pwg 3 117 2.75 RF00001 URS000044BDD8_184922 35100413 0003735 0005840 184922 aguucggccauccuacggcggaaacuccuuaacucguuccgaauuaagaagagaagcgccgucaggccccgccaguacugcgaucggagacgucgugggaacacggggugccgaacc .<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>><<<<<<......<<<<<<.<<....>>>>>>>>.....>>>>>>>>>>>>>. .(((((((....((((((((.....((((((...(.....)...))))..))....)))))).))((((((......(((((..((....)).))))).....))))))))))))). Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution; rRNA 5S 7pwo 1 2448 2.75 RF02543,RF02540 URS00023358B7_184922 35100413 0003735 0005840 184922 cggcccgaggcggcgggggcgacgggcggaacuuaagcauaucagnacgccccggaggagaaaccaaccgggauuccccguagcggcgagcgacgcgggaggagcccgccccgaaggcgcgcugugggcgccgcgagggggcccgagggccccgcccgagagggugcaagccccguacggcgggcgaguagcgcugcuugagcgugcagcgcgaagggaggcgcggcccuuccaaggcuaaauacgccccgggaccgauagcggaccaaguagcgcgancgaacggugaaaaggacgcccggccgcucaaaagaccugaacccggccggcgccggcccgccggccccnucucganacncggaccgaggagccacgcgccgcggcgagcccgagggccccgcggcggagcgagcgcgagacgccccgggcccgccgcgccccugcgggcgugcgcgggccgagccgcggcgcgugggcccganaggcggugaucuaugcccggcgagggcgaggccgggcgaaagccugguggaggcccgccgcggugcugacgcgcagaucgcucgucggagccgggcauggnggcgaaagacucaucgaaccgccugguagcugguugccuccgaaaugucucccaggacagccgccgcccgcaguugcggcccguagagcgcuggccggcggccgccccccaaacuccgaagggccgcgccgccccgcccuggccugggcggggcgggcgaaugcgggcggcgcgugggccccuccugguaagcaggacgggcgaggcgggacgauccggacgccgggccagggugcgccgccggggccggaacggcgucggccgcggccggcccggaaaauggagcgcgccggagccccggacccgcgcccggccgccgcgcgcggcggguaggaggccgcagaggccccgggggcgaaggcggcgcgcaggccccgccggaccggccucuggugcanaucucggcagcaguagcgcuacuccgcccccggaggacugagggggagacggguuccgcggcgccugcaucuggccgcggnugacucgggccuaagcggcgggugaagaccgggaaggggcgugcccgcccgucgaacggggagccggcggagacuccggcaggcgcgggcggagacgcgccccccggcgacgcgcacggggaccgcggcgggcggcgccccggcccgcgaacgccccgcagcccccggacgccuugcgcggagaggggggcccgggggcggaccgcgcguccccggccgccccugaaaagccggggggcccgcgcgccguaccgaccgcacaggacuccggggucagcagccucuagcgcgggagcgaacncggcucagggaagucggcaagccggcuccguaaccucgggaaaaggaguggcucugacggggucagaacuggaacggacgcggggaucccgacuguuuacuagaaacacagcgucgcgagggccgcacccggcgcuggcgcgacgugauuucugccnagugccagaccgucaccgugaagcgauccgccgaagcccugguaaacggcgggaguaaugacucucuuaagguagcnaanugccucnucgggcaauuuccgacggcaugaauggaccaacgaggaucccacugunccgagccgcgccuccgcgagccuccagccucgggaacgggcgagggccggccagcggngcaagaagacccunnugagcuugacnccagcccgggccuguggggcggggccgccccgcucacccggucgcgcggggacccgcccgggcggggaguucggcugnggcggcgcgccugcuacaccggaccgcaggcnucccacggcgggcucagcgaggacccucccgcggagcagaagggcacaagcccgcccgacccgcgccccccgugccggcgcgggccgcgaaagcggggccuaccgauccuucgccgccccggccgcgggcgcggagguggcagaaaaguuaccacagngauaacuggcuuguggccgccgagcgcccgcagcgacgcggcuuuuugauccuungaugucggcucuuccuaccguccgcgcgcaccggcgcggaagcgucggauuguucacccguucaagggaucgugagcuggguuuagancgucgugagacgguuaguuuuacccuacuggccccggggccagagcacggcgggccaguacggaggaacgcccgccgcgggcgcccagccccgcgguugcccgccggggcagaccgcgcgcccgggcccgggggccuggcgcugccgccucuaaagcgccaccccccccuccggccccgccgcccgcgccccagccccgugcccccugcccgaggcggcccccgcccgggaggaccacccggcgcggcgccccuguacggcgagggcgcguucgcccggggggcgcgccgcaggcgcg ......................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<....<<.....>>.....>>>>>..[[[...<<<<...........>>>><<<<..<..<<<<<......>>>>>((......<<<.....))>>>...>>>>>........<<<<<<<........>>>>>>>...(((((..<<<<<<)))))..]]]..................................<<....>>................<<<.>>>...........................<<<<<<..>>>>>>.<<<<........>>>>.<<<<<....<<<<<<<<<<<<<..<<<...<<<.>>>..>>>...<<....>>............<<<<<<<<<<<<<....>>>>>>>.>>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<<<<<.<<<<<<<<<...<<<...<<<..<<<<..>>>>..>>>..>>.>...>>>>>>>.<<<<<<<<<<<......>>>>>>>>>>>...>>>>>>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((...<<<<<<<.....<<<.<<<<<<<..>>>>>>>>>>..........)))......>>>>>>>>>>>..>>>>>>><<<<<<..>>>>>>....>>>>>><.<<<<<<<<...<<......<<<<<.<<....>>.>>>>>...>>>>>>>>>>..>.....>>>>>.<<.....<<....<<<<<....>>>>>..<<.....<<<<..<<...<<<<<<...<.......>.>>>>>>....((<<<.<<...<<<...<<<....>>>......<<<<..>>>>...>>.>....>>...<<<<<........>>>>>))<<<<<<<<<....>>><<<<<<<<<<...<<<..<<<<<<<<<<<<<<<<<.........>>>>>....<<<<<<...<<<<<<....<<.....>>......>>>>>>...>>>>>>..>>>>>.>>>>>>>..>>>.........>>>>>>>>>>>>>>>>.>>>..>>..<<.....>>.>>>>.<<<<.....>>>>..>>....<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<...>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<<...<<....<<<.<....>.>>>....>>.>>>>>..>>>>><<<<<<....>>>>>>........<...........<<<<<<.....>>>>>>....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>....>>....<<<<<........>>>>>...((((((..{{{.........{{{..{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<..>>>>>>>>>...<<<<......>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<.<<<<..>>>>.>.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>>>>>.<<<....>>>.>>))).......((((((.((((.>>>>>>))))))))))..........]]]]..}}.}}}.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<.........>>>....>>>>>..>...>>>.>>....<<<<<<<....>>>>>>>........}}}.))))))..<<<<<<.<<<..<<<<<<<<..............>>>>>>>><<<<<...<.<....<<<<<<<<<<....>>>>>.>>>>>....>.>.>>>>>.<<<...<<<<<<...........>>>>>>...>>>..>>>.>>>>>>...<.<<<.............................>>>.>...<<.<<<<.......>>>>..<<<<<<<<<<<....<<<<<<.<..>.>>>>>>...>>>>.>>>>>>>....>>. ......................((((((.....(...[..)......))))).).........((....))...((((....((.]...)).....))))...((((..(((..((...)....))))((((.....(((((......)))))[[(...).(((.....]])))....))))...)....(((((((........)))))))...(((((..[[[[[[)))))..)))..................................((....))............(...(((.)))...........)...............((((((..))))))[((((........)))).(((((....(((((((((((((..((....(((.)))...))...((....))....(......)(((((((.(.(((....))).).).))))))...)))))))))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))....))))))))).(.((.......))...)..))))))......).))..((((((....(((((....)))))(((((((((((((.(((((((((...(((...((...((((()))))...))..)).)...))))))).((.((((((((......)))))))).))...))))))))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(((((((.....(((.(((((((()))))))))))..........]]]......))))))))))...)))))))(((((....)))))....))))))(.((((((((...((......(((((.((....)).)))))...))))))))))..).....))))).((.....((....(((((....)))))..((.....((.(..((...((((((...(.......).))))))....[[(((.((...(((...(((....))).(....((((..)))).).)).)....))...(((((........)))))]](((((((((....)))((((((((((...(((..(((((((((((((((((...{.{...)))))....((((((...((((((....((.....))......))))))...))))))..))))).)))))))..)))(...)....)))))))))))))))).)))..))..((.....)).).)).((((.....))))..))....((((....((((((((.((..(....(.......(((((....(.{..).....)))))((.((((((...)))))).))(...).......(((((((((.].((.........))...(((((((....((((....))))......))))))).}.(((.(((..(((((((...((....(((.(....).)))....)).)))))..)))))(((((......)))))........((..........(((((.......))))).)..)....)))....)).))))))).)..))).)))))))).))))))....))....(((((.....]..)))))...((((((..(((.((......(((..(.((((..(((((.((((((((..(((((((((..)))))))))...((((......)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.(.((((..)))).)...).((][.[[[))....))))))).(.((((((((.....{...)))))))))(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....)}....))))...).))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(((((((((......))))))..))).(((.(.....).)))....)))))..)...))).).....(((((((....)))))))..>.))..))).))))))..(((((..(((..((((((((.....(...)....))))))))(((((...(.(....((((((((((}.}.))))).)))))....).).))))).(((....((((.............))))....)))..)))..)))))(..(.(((.............................))).)..)((.((((.......))))..(((((((((((....(((((..(())..)))))...)))).)))))))....)). Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution; rRNA 28S 7pwo 3 117 2.75 RF00001 URS000044BDD8_184922 35100413 0003735 0005840 184922 aguucggccauccuacggcggaaacuccuuaacucguuccgaauuaagaagagaagcgccgucaggccccgccaguacugcgaucggagacgucgugggaacacggggugccgaacc .<<<<<<<....<<<<<<<<.....<<<<<...............>>>..>>....>>>>>>.>><<<<<<......<<<<<<.<<....>>>>>>>>.....>>>>>>>>>>>>>. .(((((((....((((((((.....((.(((...(.....)...)))...))....)))))).))((((((......(((((..((....)).))))).....))))))))))))). Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution; rRNA 5S 7pwo 42 138 2.75 URS00023358B4_184922 35100413 184922 gaacgccccgccggcggaugccucggcccgggcggcgacgaagagcgcggcggagcgcgagacgcggugcggacccgcccgccccgagaagcaccgacccucgaacgcagcgcgcccggcgccgccgccucngcgccc ..........................................<<<<<<.((.....>>>.....<<<<<<...<..))..>.........>>>>>>...>>>....<<...>><<...>>.................. ..........................................((((((.[[.....))).....((((((...(..]]..).........))))))...)))....((...))((...)).................. Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution; rRNA 5.8S 7pwo 2 1355 2.75 RF01960,RF01959,RF00177 URS00023358C0_184922 35100413 0003735 0005840 184922 auccggucgauccugccggagcgcgacgcucuccccaaggacgaagccaugcaugccucaggacgcggcggacggcucnggacaacgguugcaccncccguggcggucgccggacaccgcuggcaacccggcgccaagacgugcgcgcaagggcgggccccgggcgagcagcgugacgcagcgacggcccgcccgggcuuccggggcaucacccggucggcgcggucgcggcgcgccgagggcccgacgccuggcggagaaucaggguucgacuccggagagcgggccugcgagacggcccgcacauccaaggacggcagcaggcgcggnacuugcccaaugcgcggcgcgcngcggcgcgacggggugcgcgcgagucaggcgggcccaccccgacccgccagggcaaggcuggugccagcagccgcgguaauuccagcucggcgagcgucgcgcggcgcugcugcaguugaaacgcccguaguuggccccccgccgccacgaggaaacgggagcgcuccaggcagguuggacccgccgcgugggaccgcggcgggcccggcgcgccgcggcagccccgaggagagcgggcgggggcaccgguaccggccggggacgggugaaacaggaugaucccgccgagaccgccggccgcgcaggcgccugccaagaccgccucugucaaucaagggcgaaggccgggggcuagaaggcgaucagacaccaccguauucccggccguaaacggugccgccccgcggccggcgcgcgucccgccggccgcccagggaaaccgggaggcuccgggcucuggggggaguauggccgcaangcugaaacuugaaggcauugacggagggguacaccagacguggagucugcggcucaaucugacncaacgcgcgcaccucaccaggcccgcgcggugnugcauggccgcucccagcccgugncgcgagccgugcuccauugcgacaacgagcgagaccccggccgcgggccgcgggacggcccgcagcgggaggacggcggggcgauagcaggucugugaugcccuccgcccugggccgcacgcgcgcuacacuggcggggccagccggcgcccgcgaggacgcgagcccccgccguggccgggaccgcgggcuggaacgcccccgcgcaccagnaaugucuuguaggcgcccgcccccaccgcgcgccggacgcgucccugccccunguacacaccgnccgucgcuccuaccgacugggcgcugcggcgagcgccccggacgggaagggccgcgagccccngcgccuggaggaaggagaagucguaacaagguaucnguaggugnnccugcggauggaucccu ..<<<<<.[..(((>>>>>.<<<<<<<<<..<<<....<......<<<.<<<..<<<.........>>>......<<........<<<..<<..<<...<<<<<......<<.....<<<<<<....>>>>>>......>>.....<<....<<<.......<.....>..>>>...>>.......>.>>>>..>>>>..>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>...<<<<<<<<....>>>>...>>>>.>>.<<<<<<..........>>>>>>.<.<<....>>.>...>>>>>>.........<<<....<<<...>>>..>>>..>.....>>>..........<<<.<<.........>>.>>>..<<<.<(((...<<<<<.....<<.)))>>.......>>>>>>.>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.......<<<.<<<<<<.......<<..<<.......>>........>>.....>>>>>..>.>>><<<<<<.......>>>.>.>>..........<<<<<<<.....<<<<..<<..<<<<<.<<<..<.<......>.>.....>>>.>>>>.>.>>.......<<....>>...>>>>....>>>>.>>>...>>>...>>>>...<<<<<<<<...<...<<.<.<.....>.>.>>...>>>>>>>>>.........<<<.<<..<<<<<<<<<<.<...>.>>>>>>>>>>...<<..))>>....>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))..]<<<<<.<<<<<<<.<<.<<<<<<..<<<.<<<<<<......<<........>>.........<<<<<.<.....<<.<<<..<<.<<<<<<....<<.<<<<<<....>>>..<<......>>....>>>.>>....<<<<<.<<<<<<.>>>>>>.....<<<<<.>>>>>.......>>>>>....>>>.>>>.....>>>>>>>..>.>>>>>...>>.>>>>.>>>.....<<<<<<<.......<<<.<<....>>.>>>....>>>>>>>......<....<<.<<<<......>>>>.>>....>.....>>>>>>....<<<<<.<<.......>>.>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<<.<<<..<<<.<<<.........>>>.>>>..>>>.>>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ ..((((..[..[[..)))).(((((((((...((....((.....(((.(((..(((.(.....).)))......(((.......(((..((..((...(.((.......(......(((.((....)).))).......).....((....(((.......(.....)..)))...)).........)).)..))))..))).(((....(((..((((((((.......)))))))))))......)))...(((.(((......)))....)))))).((.(((..........))).)).(.((....)).)...)))))).).......(((....((((.))))..)))..).....))...........(((.((.........)).)))..(((..[[....(((((.....((..]])).......)))))..)))..)))))))))...[......((([[...(.((((...(((.......(((.((((((.(.....((..((.......))........))..)..)))))..).))).((.((.......))..).)..........((((((((.(...((((..((...((((.((...(..........)......)).))))...)).......((....))...))))..).)))).)))..))))...))))....((((((....(...((.(.........).))...).))))))......{...(((.((..((((((((((.(...).))))))))))...((..]]))....))...].))))))).(((......(((......)))....)))...]]..](((((.(((((((.((..(((((..(((.((((((......((........)).........(((((.(.....((.(((...(.((.(((....((.((((((....)))..((......))....))).))....(((((.((((((.))))))..(..(((((.))))).....).)))))....)))..)).....).)))))..).)))))...)).)))).))).(...(((((((.......(((.((....)).)))....)))))))......(....((.((((......)))).))....)..)..))))).....(((((.((.......)).)))))......))...)))))))))).))..(.(..((.(.(((((.((..(.((((((((.(((..(((.(((...(.)...))).)))..))).)))))))))..)).)))))..).))...)..)..(((((((((....)))))))))}....... Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution; rRNA 18S 7qca L50 2499 2.79 RF02543 URS00026177A1_1358809 0003735 0005840 1358809 auaccacacacaagggaucguuuggcuccugggacgaggaagggcgcagcagagagcgauaugugugggagcagcagcaaugaccacacguccccgaauacagcauagugcuggaguacuccuuggaauuaagcauaugaguaaaggaaggaaaagaaacuaacgaggauucccguaguagcggcgagugaacagggaacaguccaacaguguaauucucaaaugagaaguugucaaaaggaagaagaugugaaucagaaagaaaagcugaacgauacagggugauagucccguagugucuucuuacauacggugaguagcugugcucgguaaugcacagugaagagguggcagugugcaucuaagacuaaauacaacaggagaccgauagcaaagaaguagguugaccgaaaacagugaaauuguguguggacccgaauggaucgggcccgucuugaaacacggaccaaggagugcacauacacugcaaguugagcagaggaagucugugaggcguagugaagacggaaagcagugugagugcgacccgauagacuugugaacuauaccuuguugcugugaaggcuggcgaaagccagcuggaggcggcaagccguauugaucugcaaaucauuggcguaagcaggguauaggggcgaaagaccaaucgaacagucuaguugcugguucccuccgaaaugucuaucaggacagcgcgcacgcagagagaagcaagguagagcaugggccgguauccuuaaggagacggacgaacugcgaaugugcuuuucuucuaugcaagcguagugggcgaguucugguaagcaggacuggcgaagaggaaugaaccuggcacugugcuaaggaacccaaugucuggacagagaccgaaagagguaggugaauaaaauucaucugcucugaaaauugauggcgcuuaccagacauccgaugcacaguuagcagguaggagggcgugugucuacuggcgaagguaccgagugaucggugguggagguagaugcagagcagaucuuggugguaguagcgauaauuugucuucagcggcaaagacugaggaggagaaggguuucuucucauaagaagagugagccgggucuaagcgaguguguagaagcaugagcgaaggagaaacagguugauauuccugugccugugcugucguacggcaacguguauuagcuugucgacacgaacaucuagacaaagcagaaacaccuuuucuguucaaggggaaaaagaccacugagacggaucaucuggcgacgugguuuuauaucugugaccaggccugagccugguuuguugaggauggucguccaugaaaagacaacuauauggcagcacaguccguaccaaccguaucaggacuccaaggugaagagccucuaguggauguuuuacacauguaagggaauucggcaaaauggaugcguaacuucgggagaaguauugguucaauugugaacucauugugacaaggggaaucugacuguuuaguaaaaacauagcuucaugaagagagaugaagugaguucugcccggugcucggucgugacacggaggaaaugccagaaagcacggguuaacggcgggaguaacuaugacucucuuaagguagccaaacgccucgucauuuaaauggugacgcgcaugaauggaaugacgagauucccacugucccuacauguagacuagcgaacccauuuccaggggaacgggccuggacggccagcggggaaagaagacccuguugagcuugacucuaguguggccaaguugugacgauugaggcgagcgccaugaucaucacgacacacuuguuuaaggacaaaggccagauggggaguuuggcuggggcgguacgaccacagaaucagaacguggucgaccgaagguacucacagcgagacgagaacacucguguagagcauaaggacuaaagagugccugagugugagcacuacugcuugcaugaggggaaacccgggccuagcgauccuacgcauacgagacacuuguggcgugggugucagaaaaguuaccacagggauaacuggcuuguggccgccgagcguagaaagcgacgcggcuuuuugauucuucgaugucggcucuuccuagcauggccaugcagccguggcgaaguguuggauuguucacccacuaacagggaacgugagcuggguuuagaccgucgugagacagguuaguuuuauccuacuguccaaacaguugaagggaguguggauuaguacgaaaggaaacccacacgugaccucuggugcagcgggugugcggaagugcaacugccaugcuacgucuccucaagcauagcuggaagccucuaagcuagaaaugaguccugacucuggaagacggccgggaagacgacccguaguuaacagcgguguuguacgauaugagcuuucuauuguaguagcgaguauuugagacacugguuguuaccaccgucgu ....<<<<<<<<<......((..((<<<<<<...<......<<<<<<.((.....>>>....<<<<<<..<..))..>.....>>>>>>...>>>.....<<<<<...>>>>>>....<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..<<<...........<<<<<<..>>>>>>............<<<<<<<<<<...<<<<.........>>>>((......<<<.....))>>>...>>>>>>>>>>..............<<<<<<<........>>>>>>>....<<<<<..<<<<<.>>>>>..>>>.........>>>>>>.))...............<<....>>....)).......>>>>>>>>>..<<<<<.....>>>>>.<<<<........>>>><<<<<<....<<<<.<<<<<<<<..<<<..<<<<<.....>>>>>..>>>...<<....>>.....>>>>>>>>.>>>>..<<.<..<<<<<.<<.....<<<<<<<<<<<<<<....<<<<<<<....>>>>>>>.....>>>>>.<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<..<<<<<.<<<<<<<.....<<<......<<<...<<<<..>>>>..>>>.....>>.>.....>>>>>..>>>>>..>>..>>>>.>>..<<.<<<<<<<.....>>>>>>>.>>....<<<......>>>...<<<<<<<...<<<.((...<<<<<<<.....<......<<.<<<<<<<<<<<...>>>>>>>>>>>>>..........))..>...>>>>>>>>>>...>>>>>>>.........>>>>>><.<<<<<<<<<<......<.<<<<<<....>>>>>>.>...>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<......>>>>>>.<<<.....<<<<..<<...<<<<<<....>>>>>>....((<<<<<<...<<..<<<<......>>>>..>>....>>...<<<<<........>>>>>))<<<<<<<<<<..<<<....>>>....<<<.<<<<<...<<<<.<<<<..<<<<<<<<<<<<...[[..>>>>>><<..<<<..<.<<<<<<<<.....<<<<...>>>>.....>>>>>>>>.>.>>>..>><<<<<<....>>>>>>>>>>>>...>>>>.>>>>.........>>>>>>>>...>>>>>>>>>>>>>>..>>..<<......>>.>>>>.<<<<.....>>>>..>>>....<<.....<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<....>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<........>>>>>>>..<<<..<<<..<<<<<<<.<.<<.....<<........>>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>.....>>.>..>>.>>>>>>>..>..>>.>>>>>>>..>>..>>....>>....<<<<<........>>>>>..[[.<<<..<<<.[[......<<<<.[[<<<<..<<<<<.<<.<<<<<..<<<<<<<.<<<<..<<<<..>>>>..>>>>.>>>>>>>...<<<....>>>......>>>>>.>>..>>>>>...<.<.....>.>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<.........>>>>>....<<..[.(((.>>...>>>>>>>...<<<<<<<<......>>>>>>>>..<<<....>>>.>>)))]......<<<<<<.<<<...>>>>>.>>>>>>>>>..........>>>>..]]>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>..>>.......<<<<<.<<<<<<..<<<.<<<<<......>>>>>...>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..>>>.>>>.]]...<<<....<<<<.<<<<<<..................>>>>>><.<<<...<<<<...<<<<.<<<<.]]...>>>>.>>>>...>>>>.>>>.><<<<....<<<<<...........>>>>>....>>>>>>>>....>>>...<<<<<.<<<<.......>>>>....<<<<<<<<<<<<<....<<<<<..<<<..<<<...>>>.>>>..>>>>>...>>>>>>.>>>>>>>...>>>>>.. ...((((((((((.....(((..((((((((.(.(......((((((.[[.....)))....((((((..((.]].)).....))))))...))).....((((.....)))))....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........((((((....)))))....).......((((((((((...((((.........))))[[(...).(((.....]])))...)))))))))).........)....(((((((........)))))))....(((((..[[[[[.)))))..)))......)..)))))).))...............((....))....)).).....)))))))))).(((((.....)))))[((((........))))((((((..(.((((.((((((((..(((..(((((.....)))))..)))...((....)).....)))))))).))))..((.(...((((.((.....(((((((((.(((((...(((((((....)))))))...)[))))..(((..((.((.......<)))).)))....))))))))).(.((.......))...)..))))))......).))).((((((....(((((....)))))((((((..(((((.(((((((.....(((....(.(((...(((....)))..))).)...)).).....)))))..)))))..))..)))).))..((.(((((((.....))))))).))....(((......)))...(((((((...(((.[[...(((((((.....(......((.(((((((((((...)))))))))))))..........]]..)...))))))))))...))))))).........))))))(.((((((((((......(.((((((....)))))).)...))))))))))..).....))))))((.....((.....((((((......)))))).(((.....((((..((..(((((((....))))))....[[(((.((...((..((((......))))..))....))...(((((........)))))]]((((((((((..(((....)))....(((.(((((...((((.((((..((((((((((((...{{..))))))((..((.....((((((((.....(((.....))).....))))))))....))..))((((((....))))))))))))...)))).))))(...)....))))))))...)))))))))).))).)))..((......)).)))).((((.....))))..)))....(......(((((((.((..(....(.......(((((....(.{..).....)))))((((((....))))))(...).......(((((((((.].((.........))...(((((((........))))))).}.(((.(((..(((((((...((.....((........)).....)).)))))..)))))(((((.........)))))........((..........((((((.....))))))..)..)....)))....)).))))))).)..))).)))))))...)..))....)).{..(((((.....]}.)))))..((.(((..(((.((......((((.((((((..(((((.((.(((((..(((((((.((....(((....)))....)).)))))))...(((....)))......))))).))..)))))..(((......[)).)((((((..........]))))))(.((...(((((((.(.(((((....(..).)))))...).(..[.[[[.)....)))))))...(((((((((....)))))))))..(((....))).))]]].].....((((((..((...]]]]].)).))))))....).....))))..)))))).......(..(.(..(((((...((.......))...)))))....))...)........((((.((((((..(((.(((((......)))))...))).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..>.))..))).))).))...(((....(((..((((((.......(....).....))))))(.(((...((((...((((.(((((}}..))))).))))...)))).))).)((((....((((.............))))....)))).)))....)))...(((((.((((.......))))..(.(((((((((((((....(((((..((....((...))...))..)))))...)))))).))))))))..))))).. Spraguea lophii ribosome; RNA 23S 7qca S60 1354 2.79 RF02542 URS000261779A_1358809 0003735 0005840 1358809 accagguugauucugccugacguggaugcuagucucauagauuuagccaugcauguguaagcgaagcgauuagugaagcggcggaaggcucaguaacgggcgaguauuuaaucucuagaaccggacaaccucaggaaacagaggggaaaacggaguaagagcauguguuagcaugugaugagaacaacagugcaggagaguaagaagccaucccaucaguuaguaaguaggguaagggccuauuuagacguagacggguacgggggauuaggguuugauuccggagagggagccugagagacggcuaccagguccaaggacagcagcaggcgcgaaaauuaccgaagccuccaagagggcgguagugaagagacgugaaaacaaguguguguaaaaaccacaugaguaacuggaggucaaggcuggugccagcauccgcgguaauaccagcuccaggagugucuaugaugauugcugcgauuaaaagguccguagucgaagaacaguacuuguuuguaauguggcuuaucgagagccgaauagaacgagaagaguucagaguaaggagcgaaggagggcuagauuauugagcagcgagaggugaaauuugaugaccugcuuaggaguaacagaggcgaaagcgcuagucaagaacgaauccgaugaucaaggacguaggcuggaggaucgaagacgauuagagaccguaguaguuccagcaguaaacgaugccuacgcuguugugguuaugagcacggcagaagagaaaucuaguagggcuuuggggagaguacgcgcgcaagcgauaaauuuaaaggaaauugacggaagaacaccacaaggaguggagugugcggcuuaauuugacucaacgcgggacagcuuaccauacccgauggccgugugagcguaguacgcgauaggucagagaguggugcauggccguuaacgacgaguggggugaccuuuggguuaaguccgcgaaguagugagaucccuaggauacgaaaguuaucgacagguguuaaaaacacaggaaggaaggggcaagaacaggucagugaugcccuuagaugguaugggcugcacgcgcacuacaguggucacagcagaaacaaauagaaguaaaugugaucgagagggaaugagcacuguaaugugcacaggaacgaggaauugcuaguaaucguuaucucauuaagaagcgaugaaugugucccuguucuuuguacacaccgcccgucguuaucgaagauggaaccaggugcgaacaagugaaagcgagugagugcaggguucuagaucugauacaagucguaacaaggcagcuguaggagaaccuguagcuggauca ..<<<<<.[.(((.>>>>>.<<<<<<<<<..<<<<<.<.......<<<.<<<..<<....<<...<<.....>>...>>.>>......<<.......<<<<.....<<...<<<<<.<..<<<.....<<<<.<....>.>>>>......>>>....<..<<<<<<....>>>>>>..>....<<....>>.>.>>>>>..>>...>>>.><<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>..<<<<..>>>>....>>>>>>.........<<<....<<<<...>>>>..>>>...>..>>>>>..........<<<<<.........>>>>>......<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<...<<<<....<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>....>>>>.......<<<.<<......<<<<<<..<.<<<<<<<<...<<<......>>>......>>>>>>>>..>........<<....>>.>>>>>>.....>>..>>>...>>>...>>>>..<.<<<<<<<...<....<<<.........>>>....>>>>>>>>..>.......<<<.<<.<<<<<<<<.<<..>>.>>>>>>>>..<<..))>>..>>..>>>.>>>.<<<.......<<<....>>>.....>>>....))).]<<<<<.<<<<<<<..<<.<<.<<<..<<<<<<<<<<......<<........>>..........<<<<<<<...<<<<<......<<<<...>>>>....>>>>>..<<<.<<<..<<.<<<<<<....<<.<..<<<....>>>...<<......>>......>.>>....<<<<<.<..<<<....>>.>.>.....<<<<.....>>>>........>>>>>....>>>.>>>.....>>>>>>>>....>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....................>>>>>>>....<....<<.<<<<......>>>>.>>....>.....>>>.>>....<<<<<..<<.......>>.>>>>>......>>...>>>>>>>>>>.>>.......<<.<..<<<<<.<...<<<<<<..<<<<..<<..<<....>>..>>..>>>>..>>>>>>...>.>>>>>...>.>>.........<<<<<<<<<....>>>>>>>>>...... ..((((..[.[[[..)))).(((((((((..(((((.(((.....(((.(((..((....((...((.....))...)).))......(((.......(((...(.((...(((((.(..(((.....((((.(....).))))......)))....(..((((((....))))))..).....(....)..).)))))..)))..)))..(((....(((..(((.((((.......)))).))))))......)))..(((.((((....))))....)))))).((.(((..........))).))..(((....)))....)))))).).....(.(((...(((((...)))).))))).))..)))))..........(((((.........)))))......((((([[....(.((((.....((..]])).......))))))))))..)))))))))..........((([[...(.((((...(((...((((....(((((((......((((((.....))))))....)))))))....))))......((((.((......(((((((....(((((((...((........))......)))))))....).......((....)).)))))).....))..)))..))))...))))....((((((....(....(((.........)))....).))))))......{...(((.((.((((((((.(....).))))))))..((..]]))..))..))))))).(((.......(((....))).....)))....]]].](((((.(((((((..((..(.(((..((((((((((......((........))..........(((((((...(((((......((((...))))....)))))..(((.(((...(.((((((....((.(.((((....)))...((......))....).).)).....((((.(...((....))...)..(..((((.....)))).....)..)))).....))).))).....).))))))....)))))))...)).)))))))).(...(((((((.....................)))))))....(....((.((((......)))).))....)..)..))).).....((((((.((.......))))))))......))...)))))))))).))..(.(..((.(..(((((.(..(((((((..((((..((..((....))..))..))))..)))))))..).)))))...).))...)..)..(((((((((....)))))))))}..... Spraguea lophii ribosome; RNA SSU 7qg8 A 73 3.97 RF00005 URS00023358F7_83333 35264790 0030533 0006412 83333 gcgcggauagcucagucgguagagcaggggauugaaaauccccguguccuugguucgauuccgaguccgcgca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>. (((((((..((((.....[..)))).(((((.......))))).....(((((..]....)))))))))))). Structure of the collided E. coli disome - VemP-stalled 70S ribosome; A-site tRNA 7qgh u 73 4.48 RF00005 URS00023358F7_83333 35264790 0030533 0006412 83333 gcgcggauagcucagucgguagagcaggggauugaaaauccccguguccuugguucgauuccgaguccgcgca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>. (((((((..((((.....[..)))).(((((.......))))).....(((((..]....)))))))))))). Structure of the E. coli disome - collided 70S ribosome; A-site tRNA 7qgn A 73 3.37 RF00005 URS00023358F7_562 35264790 0030533 0006412 562 gcgcggauagcucagucgguagagcaggggauugaaaauccccguguccuugguucgauuccgaguccgcgca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>. (((((((..((((.....[..)))).(((((.......))))).....(((((..]....)))))))))))). Structure of the SmrB-bound E. coli disome - stalled 70S ribosome; A-site tRNA 7qgr u 73 5.7 RF00005 URS00023358F7_562 35264790 0030533 0006412 562 gcgcggauagcucagucgguagagcaggggauugaaaauccccguguccuugguucgauuccgaguccgcgca <<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<<<<.......>>>>>>>>>>>>. (((((((..((((.....[..)))).(((((.......))))).....(((((..]....)))))))))))). Structure of the SmrB-bound E. coli disome - collided 70S ribosome; A-site tRNA 7qi4 AA 954 2.21 RF00177 URS00008F947B_9606 38769321,38769321,37503168 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA); 12S mitochondrial rRNA 7qi4 A 1558 2.21 RF02541,RF02540 URS00023359E4_9606 38769321,38769321,37503168 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..<.....>..>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<<.........<<<....>>>........>>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(((........(((....))).......)))......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......(.((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))..).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA); 16S mitochondrial rRNA 7qi5 AA 954 2.63 RF00177 URS00008F947B_9606 38769321,38769321,37503168 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution; 12S mitochondrial rRNA 7qi5 A 1558 2.63 RF02541 URS00021ED93A_9606 38769321,38769321,37503168 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..<.....>..>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<<<........<<<....>>>.......>>>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(((........(((....))).......)))......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......(.((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))..).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution; 16S mitochondrial rRNA 7qi6 AA 954 2.98 RF00177 URS00008F947B_9606 38769321,38769321,37503168 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..(...(((....((.....))...)))....)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution; 12S mitochondrial rRNA 7qi6 A 1558 2.98 RF02541 URS00021ED93A_9606 38769321,38769321,37503168 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>.<.<<<......>>>.>..<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<.<<.....>>.>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<...............<<<....>>>................>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... 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Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution; 16S mitochondrial rRNA 7qiw 2 3098 2.35 RF02540,RF02543 URS00021745CD_4081 35643637 0003735 0005840 4081 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<.......<.....>......>>>>>..[[[..<.<......<<<<<<<<<...>>>>>>>>>......>.>...<<<<<<<<.<<<.<<<<<<<.<<<<<<.<....<<<<......>>>>.((......<<<.....))>>>...>.>>>>>>...>>>>>>>.....>>>>>>>>.>>>.......<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<<<<<......<<<<<<<<<<<<..<<<<<.<<<<..>>>>.>>>>>....>>>>.>>>>>>>>.<.<<<<<<..<<<<<<<<<<<<<<<.....<<<<<<<.........>>>>>.>>...>>>>>>>>>>>>>>>.........<<<<<<<<<<...>>>..<<....>>....>>>>>>>.....>>>>>>.>....>>>.>>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<.<<<<<<..<<<..<<<<........>>>>...>>>...<<....>>....<<<<<...<<<<....>>>>....>>>>>.<<<<<<<....<<....>>....>>.>>>.>>....>>>>>>.>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<......<<.<<<<<<<.....<<<....<<<..<.<<<..<<<<<..>>>>>>>>.>..>>>..>.>>.....>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.......<..........<<<.<<<<<<.<<<.......<<....>>...>>>.>>>>>>>>>..........))).>....>>>>>>.>>>...>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<<<.......<<<.<<<<....>>>>>>>....>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<.>>>>>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<<...<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<.<<<<.......>>>>.><...<<<<<.....<<<<<<....<<<<...>>>>....>>>>>>.....>>>>>....><<<<<<<..>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>>.>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<...............<<<<<...............>>>>><<.<<<<<<<<<<<..>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<...<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<.<<<...<<<<<<<<<..>>>>>>>>>...<<<<<.....<<<<...................<<<<<<<...>>>>>>>..>>>>..>>>>>......>>>.>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<.<<<<<......>>>>>...>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<..<<<<...<<<<<.................>>>>>..<<<<<...<<<<....<<<<<<<<<......>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>...>>>>>>>....<<<<<<<<<.<<.....<<.......<<<<<..>>>>>....>>...........<<<...<<<<<<<<<<<......>>>>>>>>>>>.>>>..................>>.>>>>>>>>>.<<<<<.<.............>...<<<<<<<<<.<<<....<<<<.<..<<<<<.>>>>>..>>>>>...>>>....>>>>..>>>>>...>>>>>.. 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Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.; 25S rRNA 7qiw 8 159 2.35 RF00002 URS00023359E6_4081 35643637 0003735 0005840 4081 aacgacucucggcaacggauaucucggcucucgcaucgaugaagnacguagcgaaaugcgauacuuggugugaauuncagaaucccgugaaccaucgagucuuugaacgcaaguugcgcccgaagccauggccgagggcacgucugccugggcgucacg ...........................................<<<<<<.((.....>>>.....<<<<<......))..............>>>>.>...>>>....<<.....>><<<<...<<<..>>>...>>>>.................... ...........................................((((((.[[.....))).....(((((......]]..............)))).)...)))....((.....))((((...(((())))...)))).................... Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.; 5.8S rRNA 7qix 2 1110 2.53 RF01960,RF01959,RF00177 URS00023359BB_4081 35643637 0003735 0005840 4081 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcauguguaaguaugaacaaauagacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguuacunggauaaccguaguaauucuagngcuaauacgugcaccccgaaagggaugcauuuauuagauagcnaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguggugacgggugacggagaauuaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggaaggcagcaggcgcgcnaauuacccaauccugacacggggaggunguganaauaaauaacaauaccgggagucugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcggnaauuccagcuccaauancguanauuuaaguugnugcaguunaaaagcucguaguuggacuuuguguuacuuugaagaaauuagagugcucaaagcaagccuacgcucuguauacauungcaugggauaacauuauaggauuucgguccuaugggaucggaguaaugauuaacagggacagucgggggcauucguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggcaccuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaaggagcgnccgucgcuccuaccgauugaaugauccggugaaauguucggaucgcggucgcgagaaguccauugaaccuuaucauuuagagganggagaagucguancaagguuucnguaggugnnccugcggaaggaucauug ...<<<<<...((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<.........>>...>>.>>......<<........<<<..<<..<<....<<<<<......<<.....<..<<<.....>>>..>......>>.....<<<....>>>......<<<<<<...............>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<..>>>>>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<<......<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>........<<<<<<<<<<<..>>>>>>>>>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.<<>>>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).........<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>.........<<<<<<<<<....>>>>>>>>>......... ...((((....[[[..)))).(.(..(((((...(.(...((.....(((.(((..((....((....((.........))...))[))......(((.......(((...(..((....(((((..[...((.....(..(((.....)))..)......)).....(((....)))..(((.((..(.......(......)..)..)).).).).(]((((.((((.))))))))).)))))...)))...))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((....(((.]...)))..)))).)....).).....((((((((((..))))))).)))....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))).).)...[......(.([[...(.(.((...(.(..(......(((.((.((.......((..((.......)).(((....))).....))......)).))...)))........(((((((((((..))))))))))).....)....(((..((..(...(((...(((.(((((((....(..........).......))))))).))).......((....))....)))..)..))...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{....((.((.(((..((((((((.(((.(..))))))))))))..)))...((..]]))...))...].)).)).).(((......((((....))))....)))...]]].........((.(.(((((.((..(.(((((((..(((..((((..(...(((((..)))))...)..))))..)))..))))))))..)).)))))..).)).........(((((((((....)))))))))}........ Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.; 18S rRNA body 7qiy 2 474 2.58 RF01960,RF01959,RF00177 URS00023359C7_4081 35643637 0003735 0005840 4081 uugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacggggaaacuuaccagguncagacauaguagacugagagcucuuucnanggguggngnugcauggcnguucuuaguugguauuugucugguuaauuccguuaacgancgagaccucagccugcuaacuagcuaugcggagguucccuucgcggccagcuncuuagagggacuacggccuuuuaggccgcggaaguuugaggcaauaacangucugugaugcccnuagauguucugggccgcacgcgcgcuacacugauguauucaacgagcuuauagccuuggccgacaggcccggguaaucuuugaaauuucaucgugauggggauagaucauugcaauuguuggucuucaacgngnaauuccuaguaagcgcgagucaucagcucgcguugacuacgucccugcccuuuguacacaccg .<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<........<<........>>..........<<<<<......<<<<<.<<........>>....>>>>>...<<.<<<..<<.<<<<<<....<<<.<<.......<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<<...>>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>.......>>>>>......>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>.......>.>>>>...........<<<<<<..........>>>>>>..........>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>..... .((((..(((((((..((..(((((..(((..(((((.......(........)...........(((((.(....(((((.((........))....)))))...((.(((...(.((((((....((..((......(.((......)))...))..))....(((((.((..((((..(((..((((((((...))))))))....)))..)))).))..(..(((((.....))))).....)..)))))....))).))).....).))))).....).)))))...)).)))..))).(...(.((.(.......((.......(((.((((....)))).)))....)).......).)).)......(....(((((............)))))....)..)..))))).....((((((((.......))))))))......))...))))))).)).))..... Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit.; 18S rRNA head 7qiz 2 3098 2.38 RF02543 URS00021745CD_4081 35643637 0003735 0005840 4081 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........................(((((......(...[..).......)))).).........((....))...((((.......(.]...)......))))...((((.........((((((((((...)))))))))....)........((((((..(((.(((((((.((((((.(..({((((......)))))[[(...).(((....}]])))...).))))))...))))))).....))).)))).))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((.(....).))............).....................((.(((((((((..(...((((((((((((..(.(((.((((..)))).))).)....)))).)))))))).(.(((((((.(((((((((((((((.....(((((((.........))))).))...))))))))))))))).........((((((((((...)))(.((....))..).)))))))....))))))).)...)))).)))))).)).[((((........))))((((((....((((((.((((((..(((...(((........)))....)))...((....))....(((((...((((....))))....))))).(((((((....((....))....)).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))...(((..((.(........<.))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((......((.(((((.(......((.....((..(.(((..(((((())))))))).)..))...)).......).)))...(((((((((.(......))))))))))....))))..)))))))).))..((((....((.....))....))))....(((......)))...(((((((...((([[[...(.((((((.......(..........(((.((((((.((........((.().))....)).)))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((((.......(((.((((....)))))))....))))))))))..).....))))))((.....((.....((((.(.......).))))((((.....((((..((...((((((...((.....)).))))))....[[(((.((...(((.(((((....)))..).)...(((((.)))))...).))....))...(((((........)))))]]((((.((((((((..((((....)))...(..<((((((...((((.(((((((((((((.((((...{{..)))).)(...((((((....(((((.....(((.....))).....)))))...).)))))....)(((((((..))))))))))).).))))))).))))(...)....))))))...)).....)))).)))))))).)))..)).....((......)).)))).((((.....))))..))))..(((......(((((((.((..(....(.......(((((....(.{..).....)))))((.(((((((((((..)))))..)))))).))(...).......(((((((((.].(...........)...(((((((....((((....))))......))))))).}.(.(.(((..((((((.(.((......(((......)))......)))))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).)))))))...)))))....)).{..(((((.....]}.))))).....((((..(((.((......((((.(((((...(((((.(((.(((...(((((((((())))))))))....((((.....((((...............>...((((((.....))))))..))))..)))).......))).)))..)))))..(((......[)).)((((((..........]))))))([((....((((((.(.((((((.......))))))...).((]..[[[))....))))))..(.(((..((((....{..))))..))))((......)).))]]].......((((((..((((.]]]]]]))))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(((.(.(((......))).)...))).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...>.))..))).)))).....(((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.............))))...)))).))))...)))))))....(((((((((.(((..(.((.......(((((())))))....)))..........(((...(((((((((((......))))))))))).)))...............)..)).))))))))).(((((.(..(.......)..)...(((((((((.(((....((((.(..(((((.)))))..)))))...)))....))))..)))))...))))).. Specific features and methylation sites of a plant 80S ribosome; 25S rRNA 7qiz 8 159 2.38 RF00002 URS00023359E6_4081 35643637 0003735 0005840 4081 aacgacucucggcaacggauaucucggcucucgcaucgaugaagnacguagcgaaaugcgauacuuggugugaauuncagaaucccgugaaccaucgagucuuugaacgcaaguugcgcccgaagccauggccgagggcacgucugccugggcgucacg ...........................................<<<<<<.((.....>>>.....<<<<<......))..............>>>>.>...>>>....<<.....>><<<<...<<<..>>>...>>>>.................... ...........................................((((((.[[.....))).....(((((......]]..............)))).)...)))....((.....))((((...(((())))...)))).................... Specific features and methylation sites of a plant 80S ribosome; 5.8S rRNA 7qiz S2 1584 2.38 RF01960,RF02542,RF01959,RF00177 URS0002349D61_4081 35643637 0003735 0005840 4081 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcauguguaaguaugaacaaauagacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguuacunggauaaccguaguaauucuagngcuaauacgugcaccccgaaagggaugcauuuauuagauagcnaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguggugacgggugacggagaauuaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggaaggcagcaggcgcgcnaauuacccaauccugacacggggaggunguganaauaaauaacaauaccgggagucugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcggnaauuccagcuccaauancguanauuuaaguugnugcaguunaaaagcucguaguuggacuuuguguuacuuugaagaaauuagagugcucaaagcaagccuacgcucuguauacauungcaugggauaacauuauaggauuucgguccuaugggaucggaguaaugauuaacagggacagucgggggcauucguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggcaccuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacggggaaacuuaccagguncagacauaguagacugagagcucuuucnanggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccguuaacgancgagaccucagccugcuaacuagcuaugcggagguucccuucgcggccagcuncuuagagggacuacggccuuuuaggccgcggaaguuugaggcaauaacangucugugaugcccnuagauguucugggccgcacgcgcgcuacacugauguauucaacgagcuuauagccuuggccgacaggcccggguaaucuuugaaauuucaucgugauggggauagaucauugcaauuguuggucuucaacgngnaauuccuaguaagcgcgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgnccgucgcuccuaccgauugaaugauccggugaaauguucggaucgcggucgcgagaaguccauugaaccuuaucauuuagagganggagaagucguancaagguuucnguaggugnnccugcggaaggaucauug ...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<.........>>...>>.>>......<<........<<<..<<..<<....<<<<<......<<.....<..<<<.....>>>..>......>>.....<<<....>>>......<<<<<<...............>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<..>>>>>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<<......<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>........<<<<<<<<<<<..>>>>>>>>>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.<<>>>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<........<<........>>..........<<<<<......<<<<<.<<........>>....>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<<...>>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>.......>>>>>......>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>.......>.>>>>...........<<<<<<..........>>>>>>..........>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..)))).(.(..(((((...(.(...((.....(((.(((..((....((....((.........))...))[))......(((.......(((...(..((....(((((..[...((.....(..(((.....)))..)......)).....(((....)))..(((.((..(.......(......)..)..)).).).).(]((((..(((.))).))))).)))))...)))...))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((....(((.]...)))..)))).)....).).....((((((((((..))))))).)))....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))).).)...[......(.([[...(.(.((...(.(..(......(((.((.((.......((..((.......)).(((....))).....))......)).))...)))........(((((((((((..))))))))))).....)....(((..((.((...(((...(((.(((((((....(..........).......))))))).))).......((....))....)))..)).))...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{....((.((.(((..((((((((.(((.(..))))))))))))..)))...((..]]))...))...].)).)).).(((......((((....))))....)))...]]].]((((..(((((((..((..(((((..(((..(((((.......(........)...........(((((.(....(((((.((........))....)))))...((.(((...(.((((((.(..((..((((......))..(.((......)))...))..))....(((((.((..((((..(((..((((((((...))))))))....)))..)))).))..(..(((((.....))))).....)..))))).)..))).))).....).))))).....).)))))...)).)))..))).(...(.((.(.......((.......(((.((((....)))).)))....)).......).)).)......(....(((((............)))))....)..)..))))).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(.(((((.((..(.(((((((..(((..((((..(...(((((..)))))...)..))))..)))..))))))))..)).)))))..).))...)..)..(((((((((....)))))))))}........ Specific features and methylation sites of a plant 80S ribosome; 18S 7qqo A 84 3.0 RF02348 URS00023119D1_32630 36306733 32630 ggggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to AAVS1 off-target1 DNA substrate; AAVS1 sgRNA 7qqp A 84 2.6 RF02348 URS000261771F_32630 36306733 32630 ggggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagugc ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to AAVS1 off-target3 DNA substrate; AAVS1 sgRNA 7qqq A 83 2.65 RF02348 URS00023119D1_32630 36306733 32630 gggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .....................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to AAVS1 off-target4 DNA substrate; AAVS1 sgRNA 7qqr A 84 2.75 RF02348 URS000261771F_32630 36306733 32630 ggggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaagugc ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to AAVS1 off-target5 DNA substrate; AAVS1 sgRNA 7qqs A 84 2.4 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF on-target DNA substrate; FANCF sgRNA 7qqt A 84 2.5 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target1 DNA substrate; FANCF sgRNA 7qqu A 84 2.45 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target2 DNA substrate; FANCF sgRNA 7qqv A 85 2.25 RF02348 URS0002617742_32630 36306733 32630 gggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target3 DNA substrate; FANCF sgRNA 7qqw A 81 3.1 RF02348 URS000261773E_32630 36306733 32630 gaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ...................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ...................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target4 DNA substrate; FANCF sgRNA 7qqx A 84 2.4 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target5 DNA substrate; FANCF sgRNA 7qqz A 84 2.25 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target7 DNA substrate; FANCF sgRNA 7qr0 A 82 2.3 RF02348 URS0002311A0C_32630 36306733 32630 agagucucucagcugguacaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ....................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to TRAC off-target1 DNA substrate; TRAC sgRNA 7qr1 A 83 2.6 RF02348 URS0002311A0C_32630 36306733 32630 gagagucucucagcugguacaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .....................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .....................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to TRAC off-target2 DNA substrate; TRAC sgRNA 7qr3 C 69 2.18 RF00622 URS0002617738_9598 3.1.-.- 0004540 9598 gggggccacagcagaagcguucacgucgcggccccugucagccauugcacuccggcugcgaauucugcu <<<<<<<..(((((((<<<.......>>>>>>>>>>..<<<<<..........>>>>>....))))))) (((((((..[[[[[[[(((.......))))))))))..(((((..........)))))....]]]]]]] Chimpanzee CPEB3 HDV-like ribozyme; chimpanzee CPEB3 ribozyme 7qr5 A 84 3.3 RF02348 URS000261773E_32630 36306733 32630 ggggaaucccuucugcagcaccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to FANCF off-target6 DNA substrate; FANCF sgRNA 7qr7 A 84 3.0 RF02348 URS00023119D1_32630 36306733 32630 ggggggccacuagggacaggauguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to AAVS1 off-target2 DNA substrate; AAVS1 sgRNA 7qr8 A 85 2.75 RF02348 URS0002617728_32630 36306733 32630 ggggcaaaacucaacccuaccccguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .......................((((((..((((....))))....))))))..(((..).)).......(((......))).. SpCas9 bound to PTPRC off-target1 DNA substrate; PTPRC sgRNA 7r4x 2 1646 2.15 RF01960,RF02542,RF01959,RF00177 URS00026813A7_9606 36951107 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgcacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugaccccgggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgcccggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuccacgaggnuccauuggagngcaagucuggugccagcagccgcgguaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggagcgggcguccccgccuuacuuugaaaaaauuagaguguucaaagcaggccgccuggauaccgcagcuaggaauaauggaauaggaccggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgacuggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcncggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgaccccgcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggugcccuggcggagcgcugagaagacggucgaacuugacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<.........<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<.........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<..>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<.>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>......>>.>.....<<<<<<<<..<<<....>>>...>>>>.>>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.......................<<<<<<.<.......<<...<.......>.<<<<.>>>>...>>......>.>>>..>>>........<.<..>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<......>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<........<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<....>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>......>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<...<<............>>.....>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))((...(((((...(..(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....(((.....((....((.....((.(((.....))).))......))......)).((((...(((())))...))))((..(((((...(......)..)))))......)).(.((((.((((.)))))))))...)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)..).....(((((((((..(......)..).)))).))))....(.((..(...........)..))......)..((((([[....(.((((.....((..]])).......))))))))))..)))))...))..[......(.([[...(.(.((...(.(..(.......................((.(((.(........(..((.......)).(((.)))....).......).)))...))........(.(()).)....)....(((..(...(...((((..((..((((((((...((........))......))))))))..)).......((....))...))))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.(((((....))))))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((.).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(..(((((((.(((..((((.((...((.((........................)).))...)).))))..))).))))))).)..)).))))...).))...)..)..(((((((((....)))))))))}........ Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map; 18S ribosomal RNA 7r97 C 28 1.804 URS000080DE20_562 35829618,30916338 562 aaaggucauucgcaagaguggccuuuau <<<<<<<<<<<....>>>>>>>>>>>.. (((((((((((....))))))))))).. Crystal structure of postcleavge complex of Escherichia coli RNase III; RNA (28-MER) 7r97 D 28 1.804 URS000080DE20_562 35829618,30916338 562 aaaggucauucgcaagaguggccuuuau <<<<<<<<<<<....>>>>>>>>>>>.. (((((((((((....))))))))))).. Crystal structure of postcleavge complex of Escherichia coli RNase III; RNA (28-MER) 7rq8 2A 2800 2.5 RF02540,RF02541,RF00002 URS00001698E8_300852 34707295 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..((.((((((...(((...(.(.((((....(((..........)).)....)))).).)..)).)...)))))).))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((.(..).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((...(.......((((((((....))))))))....)...........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((...((((...........)))).....((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(............(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution; 23S Ribosomal RNA 7rq8 2x 76 2.5 RF00005 URS000041AF00_562 34707295 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution; P-site tRNA 7rq9 1A 2871 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 34707295 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<..<<<......(..>...>>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> ..(......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((..)))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((..((..((.........))...))......(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((..((((((((.(.........(((((...((.......(((((((....)))))))....)).............)))))).))))))))..)).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((.....))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....).. Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution; 23S Ribosomal RNA 7rq9 1x 76 2.6 RF00005 URS000041AF00_562 34707295 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution; P-site tRNA 7rq9 2A 2800 2.6 RF02540,RF02541,RF00002 URS00001698E8_300852 34707295 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>....<<<<<.....<......>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((.....)))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(...............)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((((((((.......)))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(......[..(((((...((.......(((((((....)))))))....))...........].)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).............(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution; 23S Ribosomal RNA 7rq9 2x 76 2.6 RF00005 URS000041AF00_562 34707295 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution; P-site tRNA 7sxp A 21 2.9 37257453 9606 ugugggagggcgggucuggga ..................... ..................... G-quadruplex structure formed in the NRAS mRNA with a G8U substitution; NRAS mRNA 7tzr X 80 2.7 RF00059 URS000080DDEB_562 35561226 0030976 562 ngacucggggugcccuucugcgugaaggcugagaaauacccguaucaccugaucuggauaaugccagcguagggaaguun <<<<<<<<<..<<.<<<<.....>>>>>>.........>>>>.....<<<...<<<<......>>>>...>>>..>>>>> (((((((((.((((.(((.....))))))......)..)))).....(((...((((......))))...)))..))))) Crystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16); RNA (80-MER) 7tzs X 80 2.21 RF00059 URS000080DDEB_562 35561226 0030976 562 ngacucggggugcccuucugcgugaaggcugagaaauacccguaucaccugaucuggauaaugccagcguagggaaguun <<<<<<<<<..<<.<<<<.....>>>>>>.........>>>>.....<<<...<<<<......>>>>...>>>..>>>>> (((((((((.((((.(((.....))))))......)..)))).....(((...((((......))))...)))..))))) Crystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17); RNA (80-MER) 7tzs Y 80 2.21 RF00059 URS000080DDEB_562 35561226 0030976 562 ngacucggggugcccuucugcgugaaggcugagaaauacccguaucaccugaucuggauaaugccagcguagggaaguun <<<<<<<<<..<<<.<<<.....>>>>>>.........>>>>.....<<<...<<<<......>>>>...>>>..>>>>> (((((((((.((((.(((.....))))))......)..)))).....(((...((((......))))...)))..))))) Crystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17); RNA (80-MER) 7u2h 1A 2871 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((.(......).)..))...))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution; 23S Ribosomal RNA 7u2h 1x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution; P-site Aminoacyl-tRNA fMet-NH-tRNAmet 7u2h 2A 2800 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((.))......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution; 23S Ribosomal RNA 7u2h 2x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution; P-site Aminoacyl-tRNA fMet-NH-tRNAmet 7u2i 1A 2871 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>....<<<<<.....<<....>>......>>>>>...........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<........<<<<<......>>>>>.....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...((.(......).))...)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((........(((.((....)).))).....)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; 23S Ribosomal RNA 7u2i 1x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; P-site Aminoacyl-tRNA fMet-NH-tRNAmet 7u2i 2A 2800 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> .........((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..((.......((((((((....))))))))....))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; 23S Ribosomal RNA 7u2i 2x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; P-site Aminoacyl-tRNA fMet-NH-tRNAmet 7u2j 1A 2871 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((.(......).)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((........(((.((....)).))).....)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; 23S Ribosomal RNA 7u2j 1x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part 7u2j 2A 2800 2.55 RF02540,RF02541,RF00002 URS00001698E8_300852 35766409 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..((.......((((((((....))))))))....))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; 23S Ribosomal RNA 7u2j 2x 77 2.55 RF00005 URS000041AF00_562 35766409 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution; P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part 7uq6 B 86 2.951 RF00005 URS00023359C4_1462 0030533 0006412 1462 ncggaaguaguucagugguagaacaccggguggaaccccaggaaacuggcccgggucgcgcggguucgagucccgucuuccgcucc <<<<<<<..<<<<.......>>>>.<<<<<.......<<<<....>>>>>>>>>.....<<<<<.......>>>>>>>>>>>>... (((((((..((((....[..)))).(((((.......((((....))))))))).....(((((..]....))))))))))))... tRNA T-box antiterminator fusion, construct #4; RNA (86-MER) 7xnx L1 3773 2.7 RF02543 URS00023359CB_9606 36259929 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcggcccggcggaucuuucccgcgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcunggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcncucuccccccucccggcgcgccggggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccgggggaggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggngcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuagnacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgcccgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugugaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnagaaauucaaugaagcgcggnuaaacggcgggaguaacnaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccccggcgcccccccgguguccccgcgaggggcccggggcgggguccgccggcccugcgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccunacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguaauccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuacnaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..[[[..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<....<<<.<<<<.<......<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>..>>>>.>>>>...>>>>>>>>>.......<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<..<<....<<<<.<<<..<<<<..>>>>>>>>>>>>>..>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<<<<<..>>>>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<<.....<..>...>>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<.<<<<<.<<<<<<<...........>.>>>>>>.>>>>>.>.>>>>>>>.>>>...>>>>..>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<......>>>>>>>..<<<<<...<<<..<<<..[[....(((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<......................<<<.<<<<<<<<<...<<<....<<<..<.<<<<....<.............>..>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<....<<.........>>....>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))....]]............................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<...........>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<....<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..{{{..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<..<<..........>>.......>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<<.<<<<<<<<.<.<...............................................................................................................>..>.>>>>>>>>...<<<<<.....<<<<.....<<.<<......>>.>>................<<<<<<<<<<.......>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))]......((((((..(((..>>>>>>.)))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]].....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<}}}.>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<.<.............>....<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((...((((((((((.....)))))).)))).....)))....((((((((((...(((.((((.(.(....((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))).)))).))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..(((((((.(.((..((....((((.(((...(.(..).).)))))))))..)).)))))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......(((((((.().))))))).......))))).))))........))))))..)))))))))))....................((((((.((((((.....(.....)..)))))).((((((.((((.((((((((((..(((((.(((((................))))).)))))...))))))).)))...))).).)))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((..(.(((((((((((((..(((..(((((........))))..)..)))...((....))...(((((((......)))))))..(((((...(((..(((..[.....[.[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((......................(((.((((((((....(((....(((..(.(((..(..................).))).)..)))..)).)....))))))...(((((((((.(......))))))))))....))))))))))))..))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{.(((((.(.(...((.........))....)).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((...........]].....]]..(.(.)..)....(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..........((.((((....(....)...)))))).......)....))...(((((........)))))]]((((....(((((...(((((((....)))))))..((((....)))...(...((((((...(((((((((((((((((((((((..{{{..))))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....(((((((.......))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((...(.(.......))........)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...(......(((......)))......).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.(((((((((.(((((((.........(....................................(.................)..............................................)..........)))))))...(((((.....(((((....((............)).)..............((((((((((.......))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((..((((....{..))))..)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}....))))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(.(.(((((......)))))...).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).))))).....((((((.(..(((..(.(((((......(....).....))))).)((((....((((....((.(((((((}}}.)))))..)).))...))))...)))).((((...((((.....}.......))))...))))..)))...).)))))).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((.(..(.......)..)....((.(((((((.((.....((((.(..(((((......)))))..)))))....))....)))).))).))..))))).. High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells; 28S rRNA 7xny L1 3773 2.5 RF02543 URS00023359CB_9606 36259929 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcggcccggcggaucuuucccgcgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcunggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcncucuccccccucccggcgcgccggggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccgggggaggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggngcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuagnacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgcccgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugugaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnagaaauucaaugaagcgcggnuaaacggcgggaguaacnaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccccggcgcccccccgguguccccgcgaggggcccggggcgggguccgccggcccugcgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccunacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguaauccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuacnaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..[[[..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<....<<<.<<<<.<......<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>..>>>>.>>>>...>>>>>>>>>.......<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<..<<....<<<<.<<<..<<<<..>>>>>>>>>>>>>..>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<<<<<..>>>>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<<.....<..>...>>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<.<<<<<.<<<<<<<...........>.>>>>>>.>>>>>.>.>>>>>>>.>>>...>>>>..>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<......>>>>>>>..<<<<<...<<<..<<<..[[....(((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<......................<<<.<<<<<<<<<...<<<....<<<....<<<<....<.............>..>>>>....>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<....<<.........>>....>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))....]]............................>>>>>>>>>....>>>>>>.<.<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<...........>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<....<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..{{{..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<..<<..........>>.......>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<<.<<<<<<<<.<.<...............................................................................................................>..>.>>>>>>>>...<<<<<.....<<<<..<<.<<.<<......>>.>>>>..............<<<<<<<<<<.......>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))]......((((((..(((..>>>>>>.)))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]].....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<}}}.>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<.<.............>....<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((...((((((((((.....)))))).)))).....)))....((((((((((...(((.((((.(.(....((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))).)))).))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..(((((((.(.((..((....((((.(((...(.(..).).)))))))))..)).)))))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......((((.((.().).))))).......))))).))))........))))))..)))))))))))....................((((((.((((((.....(.....)..)))))).((((((.((((.((((((((((..(((((.(((((................))))).)))))...))))))).)))...))).).)))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((..(.(((((((((((((..(((..(((((........))))..)..)))...((....))...(((((((......)))))))..(((((...(((..(((..[.....[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((......................(((.((((((((....(((....(((..(.(((..(..................).))).)..)))..)).)....))))))...(((((((((.(......))))))))))....))))))))))))..))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{.(((((.(.(...((.........))....)).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((..........]]].....]]..(.(.)..)....(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..........((.(((((...(....)..))))))).......)....))...(((((........)))))]]((((....(((((...(((((((....)))))))..((((....)))...(...((((((...(((((((((((((((((((((((..{{{..))))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....(((((((.......))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((...(.(.......))........)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(..((......(((......)))......)))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.(((((((((.(((((((.........(....................................(.................)..............................................)..........)))))))...(((((.....((((..((.((............))))..............((((((((((.......))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((..((((....{..))))..)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}....))))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(.(.(((((......)))))...).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).))))).....((((((.(..(((..(.(((((......(....).....))))).)((((....((((....((.(((((((}}}.)))))..)).))...))))...)))).((((...((((.....}.......))))...))))..)))...).)))))).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((.(..(.......)..)....((.(((((((.((.....((((.(..(((((......)))))..)))))....))....)))).))).))..))))).. High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells; 28S rRNA 7z4d A 75 3.1 RF02348 URS0002616B72_32630 36002571 32630 aaagaugagacgcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .............<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .............((((((..((((....))))....))))))..(((..).)).......((((....)))).. Crystal structure of SpCas9 bound to a 10 nucleotide complementary DNA substrate; sgRNA 7z4d F 77 3.1 RF02348 URS0002616B72_32630 36002571 32630 auaaagaugagacgcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga ...............<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. ...............((((((..((((....))))....))))))..(((..).)).......((((....)))).. Crystal structure of SpCas9 bound to a 10 nucleotide complementary DNA substrate; sgRNA 7z4i A 96 3.12 RF02348 URS0002616B75_32630 36002571 32630 cgcauaaagaugagacgcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuu ..................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.<<<<<<...>>>>>>.. ..................((((((..((((....))))....))))))..(((..).)).......((((....))))..(((((...)))))... SpCas9 bound to 16-nucleotide complementary DNA substrate; sgRNA 7z4l A 96 2.54 RF02348 URS0002616B75_32630 36002571 32630 cgcauaaagaugagacgcguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuu ..................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.<<<<<<...>>>>>>.. ..................((((((..((((....))))....))))))..(((..).)).......((((....))))..(((((...)))))... SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state; sgRNA 7zj4 E 374 4.43 URS00026813E8_32630 29872003 32630 ggauacgucuacgcucagugacggacucucuucggagagucugacauccgaaccauacacggaugugccucgccgaacagucuacggcgagcuuaagcgcuggggacgcccaacgcaucacaaagacugagugaugaaccagaaguauggacugguugcguugguggagacggucggguccaguucgcugucgaguagagugugggcuccaucgacgccgcuuuaagguccccaaucguggcgugucggccugcuucggcaggcacuggcgccgggaccuugaagagaugagauuucgaucucaucuuugggugucucuggugcuugagggcccuguguucgcacagggccgcucacuggguguggacguaucc <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<....>>>>>>>>><<<<<<<..((((((.>>>>>>><<<<<<<<<..((((((.>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<..)))))).>>>>>><<<<<<..)))))).>>>>>><<<<<<<<<<<<.<.......<<<<<....>>>..>>...........>>>>>>>>>>>>>>><<<<<<<<<<<<.......<<<<<...<<<<<<<....>>>>>>.>..>>>>>>>>>>>>>>>>><<<<<<<<<....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ((((((((((((((((((((((((((((((....)))))))))(((((((..[[[[[[.)))))))(((((((((..[[[[[[.)))))))((((((((((((((((((((((((((((((..]]]]]].))))))((((((..]]]]]].))))))((((((((((((.....(....((((....)))..)..........)..))))))))))))))((((((((((((.......(((((...(((((((....)))))).)..)))))))))))))))))(((((((((....)))))))))))))))))))))))))))))))(((((((((....)))))))))))))))))))))))))))))))) Ligand bound state of a brocolli-pepper aptamer FRET tile; brocolli-pepper aptamer 7zj5 E 374 4.55 URS00026813E8_32630 32630 ggauacgucuacgcucagugacggacucucuucggagagucugacauccgaaccauacacggaugugccucgccgaacagucuacggcgagcuuaagcgcuggggacgcccaacgcaucacaaagacugagugaugaaccagaaguauggacugguugcguugguggagacggucggguccaguucgcugucgaguagagugugggcuccaucgacgccgcuuuaagguccccaaucguggcgugucggccugcuucggcaggcacuggcgccgggaccuugaagagaugagauuucgaucucaucuuugggugucucuggugcuugagggcccuguguucgcacagggccgcucacuggguguggacguaucc <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<..>>>>>>>>>><<<<<<<..((((((.>>>>>>><<<<<<<<<..((((((.>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<..)))))).>>>>>><<<<<<..)))))).>>>>>><<<<<<<<<<<<.<.......<<<<<....>>>..>>..........>.>>>>>>>>>>>>>><<<<<<<<<<<<.......<<<<<....<<<<<<....>>>>>>....>>>>>>>>>>>>>>>>><<<<<<<<......>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<....>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ((((((((((((((((((((((((((((((....)))))))))(((((((..[[[[[[.)))))))(((((((((..[[[[[[.)))))))((((((((((((((((((((((((((((((..]]]]]].))))))((((((..]]]]]].))))))((((((((((((.(...(...(((((....)))..)).........)).))))))))))))))((((((((((((.......(((((...(((((((....)))))).)..)))))))))))))))))(((((((........)))))))))))))))))))))))))))))(((((((((....)))))))))))))))))))))))))))))))) Unbound state of a brocolli-pepper aptamer FRET tile.; brocolli-pepper aptamer 7zjw L5 3764 2.8 RF02543 URS0002616B6F_9986 35709277 0003735 0005840 9986 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggaaaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcgguggggcgcgggaaauguggcguacggaagacccacuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcgugguccggccgugccggcggucucggcggaucuuucccgcuccccguuccuggggguggggucggcgggggaccgccccccggccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggccccggcggggaagguggcccggggggacgccucgccgccgucguccgcggcggcggcgggcgcgaccccuccccggguguuacagccccgccccggcagcagcagcucgccgaaucccggggccgagggagcgagaccugugucgccgcgcucuccccccucgggggggccgggccgccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgugucacgccgucgggcucgggggaggccacggcgcgucgcgcgccggcgcgcgcgcgcgagcgagcgcacggggucggcggcgaugucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcggcggcgccgucgucggccgaggugggaucccgaggcccuuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcaaccccgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgcuggcagucggcagagcgagaaagagaguggagccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucagccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugguagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaauggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccgggccgccggugaaauaccacuacucuuaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgccgggccccgucgguccgggccggcggcggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugagcuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgaaggagccucgguuggccucggauagccggucccccgcgggguccggugcggagagcccuucgucccgggaaauggggcgcggccggaaagggggccgcccucucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<....<<<<<<<<.<<<....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>>>>>>>>>>>>...>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<....<<<<<<<.<<<<<.<.....<<<<<.<<<..<<<<<<<<<<<<<<<..>>>>>>>>>..>>>>>>>>>>>>>>.>>>>>>>>>>...>>>.>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<..<<<<<<<......<<<<<<<<<<......<<<<<<<<<<<<..>>>>>>>>>>>>..........>>>>>>>>>>.......>>>>>>>..>>>.........>>>>>>..>>>>>>>>>>>.....<<.....[[>>......<<<<<..<<<<<<<.>>>>>>>.<<<<<<.<<<<.<<<<<<<<<.<<<<<<<<..<<<<.<<<<....>>>>.>>>>..>>>>>.>>>.>>>>>>.>>>...>>>>..>>>>.>><<<<<..<<<.<<..>>.>>>.>>>>>.....>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<.....<......>.....>>>>..<<<<<...<<<..<<....((((.{{..>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<..........<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<.....>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<.......]]...........}}.))))..............>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<<<...>>>>>>>>>>>......>>....>>...<<<<<........>>>>>))<<<<....<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<..<<<<<<<..........<<<<<..<........>............>>>>>.>>>>>>>..>>>>>.>>>...<<<<<.....<<<.<....<<<<<<<..>>>>>>>................<<<<<.<<<<.<<<<.<<....>>.>>>>..>>>>.>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<.<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<.]]]..>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<..<<..<<<<....<<<........<<<<<..<<<<..>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<........>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<....<<<<<......>>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....(((((((((....((((((((.((.....((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))).))))))))))...)))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....((((((((((.(..(((((((.(((((.((....(((((.(((..(((((.(((((((((..)))))))))...))))))))))))))))))))))))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((...((((((......((((((((((........(((.(((((....))))).)))............)))))))))).......))))))...))).........))))))..))))))))))).....((.....{{))......((((((.(((((((.))))))).((((((..(((.(((((((....((((((..((..(.((((....)))).)...)).)))).))....)))).)))...)))...)))).))(((((.................)))))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..((((..........)))..)..)))...((....))...((((....(.........)...))))..(((((...(((..((.(]......[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((..........(((.((((((((.....((.....((.....((..(((((..(.....)..))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(((((.(((...((.........))...))).....(....(......)..).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((.......}}.........].]]......(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.(((((((((...))))))))))).......)....))...(((((........)))))]]((((....(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......((((((..((..(....(.......(((((....(.[..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......((.(....).))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..))))))...)))))....)).[..((.((.....>].)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.((((.(....((((((...........(((....(........)..............)))..))))))....)..))))...(((((.....(((....(.....(((..))).....)..............(((((.(((..(....(.(..)..)....)..))).)))))...)))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...b.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).(((....((((.....a.......))))....)))..)))...).).)).).....(((((((..((..((((.(..(((.........((((..(((....))).))))........)))...(((..((((....((((.(((((..........)))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. Rabbit 80S ribosome as it decodes the Sec-UGA codon; 28S rRNA 7zjw S2 1770 2.8 RF01960,RF02542,RF01959,RF00177 URS0002616B7D_9986 35709277 0003735 0005840 9986 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucguacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucagaucaaaaccaacccggugccggcggcuuuggugacucuagauaaccucgggccgaucgcacgcccuccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggagcgggcggccgcccguccccgccucucggcgccccggggcccgaagcguuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgacuggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacucaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggucggcccacggcccuggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<...[[[[>>>>>[[[.((((((.....{{.........[[[.[[[..<<....<<....<<..........>>...>>.>>......{{........[[[......{{....[[[[[.........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<...<....>...>>...>>>>[[..(((((.....<<<<<<<<..................<......>..)))))......]]...<<<<.<<<<......>>>>>>>>.]].]]]...}}....]]].<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.}}.<<.<<<..........>>>.>>.<.<<....>>.>...]]]]]].........<<<....<<<<...>>>>..>>>......}}.......<<<<<<<<<.<<<....>>>..>>>>>>.>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..)))))).]]]............{{.......{{...[[[.[[.....<........<..>........>.<<...<<<<.<<<<.>>.>>>>>>.>>..<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........{.[[.(((((((......>>>>>>>>.))))))).]].}....]]....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...]]]...}}......<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..}}>>...>>.....>>>.....<<<......<<<<....>>>>....>>>..]]]]..<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.......>>>>>....>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>......<.....<<<<<..........>>>>>.....>.....>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<<<<<<<<<.....>>>>>>>>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(....((....(((.....(([...((.....((.(((.....))).))......))......)).((((......................))))((..(((((......{.....{.(..........).....(......)..)))))......)).(]((((.((((......)))))))))...)))...))..).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((.(((....)))..)))))).)))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(............................((...(((..((((.)).)).))).))..(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((.......}.....}.))))))).)).)....)....(((..(...(...(((...((..((((((((...(..........)......))))))))..)).......((....))....)))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..(.((((((.(((((....))))))))))).)..)))...((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((........(..(((........)))..)......)))))...((.(((...(.((((((.(..((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........))).)..))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((.....((((((((((((((((.....)))))))))))).).))).....)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ Rabbit 80S ribosome as it decodes the Sec-UGA codon; 18S rRNA 7zo1 A 85 2.4 RF02348 URS0002617741_32630 36306733 32630 aggauaggagaagaugauguauaguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguga .......................<<<<<<..<<<<....>>>>....>>>>>>..<<.....>>.......<<<<....>>>>.. .......................((((((..((((....))))....))))))..(((..).)).......((((....)))).. SpCas9 bound to CD34 off-target9 DNA substrate; CD34 sgRNA 7zta 16S1 1534 2.7 RF00177,RF01959,RF02542,RF01960 URS000081169C_83333 37322159 0003735 0005840 83333 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<......>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<<....>>..>>>>>.>>.<<<.<<<..<<<<<<<......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((((.(....).))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((...(....).)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))...(.(((.(...(..(.((((((((.......)))))))).)...)....).)))....)..(((.([[[...(((((.....((.]]])).......)))))).)))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))........(.(((((((..(...(((((((..(((((((....)))))))....(....)...))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....))))))))..)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide; 16S ribosomal RNA 7zta 23S1 2903 2.7 RF02541 URS000080E25C_83333 37322159 0003735 0005840 83333 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<<<<<<.....>>>>>.>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<<..<<<<.......>>>>..>>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<..<<....>>...>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((.........))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.......(((((.(((..(((.........)))..))).....(...((......)).).)))))...)))..))))).))...........]]].)...))))))))))...)))))))((((((((......))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((((((((.((((.(......[..(((((..(((.......((.((((....)))).))....)))..........].)))))).)))).)))))))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide; 23S ribosomal RNA 7zta 05S1 120 2.7 RF00001 URS0000049E57_83333 37322159 0003735 0005840 83333 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggcau <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>>. ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))). Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide; 5S ribosomal RNA 8a22 A1 109 2.91 URS000261776F_353565 36253367 353565 ugugaccguuagcgcauaguacaguaauggaagugcauaaaccaaauuaaaggcuuaaauuaaaaauaaaauggcuggugcaauggcacaaaaaauaagaaaguuuaaa <<<<.<<..............<<....>>....<<<<....<<<...........................>>>....>>>>..>>>>>>................... ((((.((..............((....))....((((....(((...........................)))....))))..))))))................... Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-1 8a22 A3 207 2.91 RF02541 URS0002617776_353565 36253367 0003735 0005840 353565 uuacaggcauuuaauucgaagcauagcgagcuaacguuuagcagguuugcauaaauuaaauauauuaaaaaagcaagaccgcaaagguuucuguagcaauagaaucuugugacuuaacguuaggggcgauaaaccaaucacgcuauggcauagcuaaguuucugcgaaauauauuuagguauagcuuaaaaaacuuuauagauaaaa ..............<<.<..<<<<<<<.....<<<<<<.<<..<<<<<<<.....<<<<.....>>>>....>>>>.>>>...<<<..<<<<........>>>>.>>>....>>.>>>>>>...<<.......>>......>>>>>>...>..>.>>............<<<<<....>>>>>........................ ..............((.(...((((((.....((((((.(((.(((((((.....((((.....))))....)))).)))...(((..((((........)))).)))..).)).)))))).(.((.......))...)..))))))......).))............(((((....)))))........................ Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-3 8a22 A4 73 2.91 URS000261775F_353565 36253367 353565 uaagucagacgcaaagcuacaagguuucgcgucaaaaggaaaaaaguccgccagcgaggcuaagguacauaaa .......<<<<<.<<<<......>>>>.>>>>>....<<<......>>>........................ .......(((((.((((......)))).)))))....(((......)))........................ Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-4 8a22 A6 109 2.91 URS0002617775_353565 36253367 353565 gcagguagcagaacguucuauauaauagaauugcuaaugcugguauaaguaacuauguaaaaauacagcuaagcuaaagguuuugcgcaacagugaaacgauaaaguaa .............<.<<<<<<...>>>>>>..>.......................<<......>>.................<<.....>>................. .............(.((((((...))))))..).......................(((....))).................((.....))................. Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-6 8a22 A7 534 2.91 RF02541 URS0002617768_353565 36253367 0003735 0005840 353565 aaucguaccgcaaaccaacacagguuaguuauuguaaaggcuguauaaaaccaggauaaaggaacucggcaaaauagguuauguuuucguacaaaaccacaacaaaaguagugacuguuuaccaaaaacacaagacucugcuaacacuuauaguggaaguauagugucugauaccugcccaaaggcaaagcaaacggcagcuguaacucuaacggcucuaagguagcaaaauuccauggcauuuaaaugaugucccgcaugaaugguauaacaacuucuuaacugucucuauucuggauuaggcgaacuuuaaaugcuugugcagaugcaggcuagcuaacaagggacgaagagacccuaugcagcuuuagggcagguuauuauucaauaaacuaccuuuuuucugggacggacgcucuuauuaaagaaacaagagugagcaaugguuuuuacuaauuauaaaaaagaaaagcuuaacugcaauacaaacaauuaaagcaggggcauugucggcaauaaugcauugaagaaaua ..............<<......>>...................<<.....<<<<<<<<.<<.........<.....<<<<.<<<......>>>.>>>>.......<<<.<<<<..<<<.........>>>..<<<<.<<.....<<<.....>>>.......>>.>>>>.<<<<<.<<<.....<<...>>....>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>.>>>...>..>>.>>>>>>>>..>>..............<<<<<........>>>>>....................................<<<<..<<<<<<<....>>>>.>>>.>>>>...<<<.....>>>.<<<<<<...........>>>>>>..<<...<<<<<<..<.....((......>.>>>>>>...<<<<..<<........>>..>>>>.<<<...>>>.>>.))................. ..............((......)).........[.........((.(...((((((((.((..(....(.......(((..(((..{...)))..))).].....(((.((((...((.........))...((((.((.....(((.....))).......)).)))).}((((.(((.....((...))....)))(((((.........)))))........((..........((((((.....))))))..)..)....))))...)).)).)))..)..))).)))))))).)))...........[..(((((......].)))))....................................((((..(((((((....)))).))).))))...((......[))..(((((..........])))))...((...(((((((.((....[[.....)))))))))...((((..((........))..)))).(((...))).)).]]................. Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-7 8a22 A8 350 2.91 RF02541 URS0002617774_353565 36253367 0003735 0005840 353565 cguucuucaaccaacggaauaaagcuacgcuagggauaacaggcuuauucgcucacagaguuuuaucgacgagcgcgguuggcaccucgauguuggaucaccgcuuccuguagcugcaaacgguuauaaggguuagacuguucgucugauaaugcgguacgugaucugaguucaaagcgucguaagacaguuugguuucuaucuuuguuagcauaaguauuacggcguuguguacaguacgaaaggauuguugcacaauuaaccaauaguuuaaagagcaacguuaauaaaccggaaaacuuuuaacugcacugugcaguugcaggcaaagcaauguucagcuaaaaaaa .........................................<<<<.<..<<<<<...<<......>>...>>>>>....>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>.....................<<<<.<<.<<<...<<<<<<.................>>>>>>.<<<<<.....<<.......>>...>>>>>....>>>..>>>>>>...................<<..<<<......>>>...>>........ ........................................(((((.(..(((((...((......))...)))))....)))).).).....(((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).))....(((((((....))).)))).....................((((..(.(((...(((((((....(....)....).)))))).(((((...(.((.......)).).)))))....))).)..))))...................((.((((......))).).))........ Structure of the mitochondrial ribosome from Polytomella magna; mtLSU-8 8a22 B1 102 2.91 URS0002617782_353565 36253367 353565 cauaggguuugguuuuugcccagccuuuagcuuagcguuaagcuuauacaugcuagccuaaaagacggcgcacaggugcauauuuuguaagcauguaaaaua ....<<<<.........>>>>..................................<<<........>>>................................. ....((((.........))))..................................(((........)))................................. Structure of the mitochondrial ribosome from Polytomella magna; mtSSU-1 8a22 B2 210 2.91 RF00177 URS0002617766_353565 36253367 0003735 0005840 353565 aaaguguacuuuauaaagucauuguauugcuuacaaauaacuaggcaguugggucggcugcuauacuauagcgccccaagccugauaauuagcuaggcguaacagcggcaagccacaguagcacauaaaaauugcuaccguuaacgcagcaguaagaaagauuggacaauagcuuaagggcagauccagguaagcgcuaaaaucuuugug ..<<<<.<<<<....>>>>>>>>.............<<.....<<<..<<<<<.<<...............>>.>>>>>>>>.....>>..<<<..<<......>>....>>>....<<<<<<.........>>>>>><<<..>>>.................<<<...<.<<<....>>>..>>>>....................... ..((((.(((......))))))).............((.....(((..(((((.((...............)).)))))))).....))..(((..((......))....)))....((((((.........))))))(((..)))...............(.(((...(.(((....)))..)))))...................... Structure of the mitochondrial ribosome from Polytomella magna; mtSSU-2 8a22 B3 373 2.91 RF00177,RF01959,RF02542,RF01960 URS0002617754_353565 36253367 0003735 0005840 353565 gagcuccggcuaauugugugccagcagccgcgggaauacacaaggggccaguuuaagguuaaaacaaggcaacgguguuuaaaaacuggaaaugcgccuaaaauagcuuaaugcguuggaguaaggguuaaaucuguaaaaaccuugcagaaagccuuaaaguaaaagcagcuauucaugcccauaaaacagucuauaaacgagagcugcgguagcaaaacggauuagauacccguguagucccagccguaaauuauuuauuaaauuaaagcgccuagcgauauugccuauggcacuaaacuagggaaucugacagcauuaagcgguggagcauacuucuuaauuugauaauacgcaaaaacauuaccacgau ..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>...................<<<......<<<<<...<<.....<<<.<<.<..<<<<<<<<..<<<...<<....<<<......>>>.......>>..>>>..>>.................>>>>>>.>.>>.>>>......>>...>>>>>....<<<<.<...<<...<<<<.<.....>.>>>>...>>>.>>>>.........<<<<......>>>>..>>>.<<......<<<<...>>>>.....>>...........................................<<........>>................ (.((((([[[...(((((.....((.]]])).......)))))))))))..................(((....(.((((....((.....(((.((.(..((((((((..(((...((....((........)).......))..)))..)).................)))))).).)).)))......))....))))....((((.(...((...((((.........))))...))).)))).........((((......)))).)))).((......((((...)))).....))...........................................((........))................ Structure of the mitochondrial ribosome from Polytomella magna; mtSSU-3 8a22 B4 332 2.91 RF00177,RF01960,RF02542,RF01959 URS000261777D_353565 36253367 0003735 0005840 353565 aaaccacgguauugcauggcugauauauaauccauacaaaggauauaaccaaguagcauggucuuauauugugggcuggcggugugcuacaaguaacaaaaaguacaaccggauuaauuacugaaaucauaaauauaaagagggaaucgcuaguaaucuuuauuauaacauaaaggugaacuagugugcacacacugcccgucacauccgggaaaaccacaaagcccuaaguuuguauaguguuuaauaaaccaauucaaacauaagcuuauuguuaacaaggaugaagucguaacaagguuugcguaggggaaccugcucaagauuaugcu .......<<.<<...<<<<<<.....<<<.<<<.......>>>>>>.....>>>..>>>.>>>>...............................<<.....>>.....<....<<.<<<.........>>>.>>....>...............<<<<<<<<......>>>>>>>>...................<..<<.<.<<<<<..<..<<<.<..<<<<....<<<<<<.<<.<.<<.......>>>.>>.>>>>>.>..>>>>.>.>>>..>..>>>>>..>.>>...>.....<<<.<<<<<....>>>>>.>>>......... .......((.(((...((((((....(((.(((.......))))))...).)))..)).))))).........................(.....((.....)).....(....((.(((.........))).))....)..)............(((((((((...).)))))))).................(.(..((.(.(((((..(...((.....(((.....(((((.((.(.((.......))).)).)))))....)))....))...)..)))))..).))...)..)..(((.(((((....))))).)))......... Structure of the mitochondrial ribosome from Polytomella magna; mtSSU-4 8a3d A 3303 1.67 RF02543 URS00026813B2_9606 36909531 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgggcggaucugaccgucggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucggccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggaggucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccgggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggccgaggugggaucccgaggccucucgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucggcaguuuuauccgguaaagcgaaugauuagagguaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgcugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacaggaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcaguccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcuagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggagcucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaagaguuuuucacugacccggugaggcggggggcgcuucuggcgccaagcgcccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccgguccccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggaaaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuugggucgggguuucguacguagcagagcagcgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<..<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>.....>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<...<<<<.<...>>>>>..>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<<..>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>............<<<<<..<<<<<<..>>>>>>.<<<<<<..<<<.<<<<<<<<<<.<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>>.>.>>>>>>>.>>>...>>>.>>>>.>>..<<<<<<<..>>>>>.>>.....>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<..>>>..<<<<<...<<<..<<<.....>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<...<<<.<<<<<<<<<...<<<....<<<..<.<<<..>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<..........>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.................>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<..>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<..>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<..>>>>>>>...<<<<<.....<<<<..................<<<<<<<..>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<...<<<.<<<<<<<]]].>>>>>..>>.>>>..>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<..<<..<<<<....<<<........<<<<<.<<<..>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>.>>>>>><<<<<..................<<.<<<<<<<.<<.....<<<<....<<<<..>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..((((((((((.......))))).))))....))))....(((((((....(((((((..({((((......)))))....[[(...).(((....}]])))...).)))))).......)))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((.(..(((((....(((.((.)))))...))...)))).)))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((......(((((..))))).......)))).).)))........))))))..)))))))))))............((((((.((((((..)))))).(((((...(((.((((((((((..((((((((((((.((((....)))).))))))))))))...))))))).)))...)))..))).))..(((((((..))))).))....)))))).....))).)))))...)))))...)))))))).[((((........))))((((((..(.(((((((((((((..(((..(((((........))))..)..)))...((....))...(((.).))..(((((...(((..(((.....)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((...(((.((((((((.....((.....((....(((..)))....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((..........)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((................)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)............)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.((((..((..(....(.......(((((....(.{..).....)))))((.(((((((((..)))..)))))).))(...).......(((((((((.].(...........)...(((((((....((((.....))))......))))))).}.(.(.(((..((((((.....(......(((......)))......)..))))..)))))(((....)))........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..)))).)...)))))....)).{..((.((.....]}.)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.(((((((..)))))))...(((((.....((((..................(((((((..)))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...>.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.............))))...))))..)))...).).)).).....((((((..((..((((.(..(((........(((((.(((..))).))))).......)))...(((...(((....((((.(((((((......)))))))))))...)))...)))...........)..))))..)).))))))(((((....(.......).....((.(((((((.((.....(.((.(..(((....)))..))).)....))....)))).))).))..))))).. Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound; 28S ribosomal RNA 8a3d B 120 1.67 RF00001 URS00000F9D45_9606 36909531 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound; 5S ribosomal RNA 8a3d C 148 1.67 RF00002 URS0000005270_9606 36909531 0003735 0005840 9606 cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacaugaucaucgacacuucgaacgcacuugcggccccgggcccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>..........>>>..>...>>>....<<....>><<<<<<<<..>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]]..........)))..)...)))....((....))((((((((..)))))))).................... Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound; 5.8S ribosomal RNA 8a3w S1 1663 2.89 RF01960,RF02542,RF01959,RF00177 URS0002915692_347515 0003735 0005840 347515 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((((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))))).))....((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...((((...((((((((....))))))))....{.(((((((((.....((((........((((((.((.(((...(.((((......)))))[[(...).(((.....]])))...)))...)).)))))).)))).)))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((((((((..(((...((.......))...)))...((....))..((((.....))))......)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...(((((((.....))))).))...))))))))..)).).....))))).)))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.......(.(...((.........))...).)..............................)))))))))).))...........]]].)...))))))))))...)))))))((((((()))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]]((((((((.((......((...(((((...((((..(((..(((((.(((((....{{....))))).((..(((((..((((.((((((.((.....))))))))......))))..)))))...))..........)))))...)))...))))(..)....)))))..))..)).)))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((....((((....))))...)))))(...).......(((((((((.>.((.........))...(((((((.....(((....)))..[....))))))).}((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((((.(....................((................(..............).......................))...........).)))))....((.((((((...].)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((....))))....(((.(((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))....)))...))))))).. Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.; 23S ribosomal RNA 8a63 A 2908 3.1 RF02541 URS000261774E_169963 36300626 0003735 0005840 169963 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<<....>>>>>>>>......<<<<<<<<<<....<<<<........<<<<<<<<<.<<<.....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>>>>>>.>>>>>>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.......>>...>>>...<<....>>..<<<<.....>>>>......>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<.....<<<<<<<<<.....<<<...<<<<<<<<.<.<<<<<.<......>>>>.>>.>.>>>>>>>>..>>.>.....>>>>>.>>>>...>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<<.......<<<<..<<...<<<<.......>>>>...>>.........<<......>>....>>>>...>>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<..>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<.<<......<<...<<<<<...<<<<..<<<..<<<<<.<<<<<...(((....>>>>>.<<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>..>>>>>...>>..........>>>>>...>>>...>>>>........>>>>>..>>..>>.>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<....<<<<....>>>>...>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>..<<<<.<<<..<<<<<<<..<<<<..<<...<<<<<..<<....>>...>>>>>...>>..>>>>>>>>>..>>>>><<<<<.........>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>...>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<<<.<..<<<.<<............<<<....<<........<<<<.<<....>>.>>>>.....>>..............>>>...>>.>>>..>.>>>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>...>>>>....>>>>>>.. ((((((......((((((((((.....(((..(((((((((((((......((((((.[[..[[[)))...].((((((...(((]]..]].)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))))).))....((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...((((...((((((((....))))))))....{.(((((((((.....((((........((((((.((.(((...(.((((......)))))[[(...).(((.....]])))...)))...)).)))))).)))).)))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((((((((..(((...((.......))...)))...((....))..((((.....))))......)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))((((((((....((((((((((.....(((...((((((((...((((.(.......).)).))...))))))))..)).).....))))).)))).).)))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.......(.(...((.........))...).)..............................)))))))))).))...........]]].)...))))))))))...)))))))((((((()))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]]((((((((.((......((...(((((...((((..(((..(((((.(((((....{{....))))).((..(((((..((((.((((((.((.....))))))))......))))..)))))...))..........)))))...)))...))))(..)....)))))..))..)).)))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))(((((....((((....))))...)))))(...).......(((((((((.>.((.........))...(((((((.....(((....)))..[....))))))).}((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((((.(....................((.......(........(..............)......)................))...........).)))))....((.((((((...].)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((......)))....(((.(((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))....)))...))))))).. Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.; 23S ribosomal RNA 8a98 1 1579 2.46 RF02543 URS00027E5B01_347515 38722744 0003735 0005840 347515 agaccugaguguggcaggacuacccgccgaacuuaagcauauuacucagcggaggaaaagaaaacaaccgugauucucucagugagcggcgagcgaagagggaacgaacucguugccgaaucgggucuuacaaggccuuaaguuguggcacaaauaucauuucgugguuggugcaggaguggcgaaauucaagcgcaaagcaaacccguugcugaauacaacccuucaugugaguauugagccaaagaagguguuagcccauugagccauaaaccugagcgccucaugaacaagcgaguagcacuguuugggaaugcagugucaaguuggcagguauuugucugccaaaguuaaauacagaguaggaagaccgauagcgaacaaguagcgugagcgaaaguuugaaaagcacuuuggaaagagaguganauagaaccugaagucgugacaaagacaauggaaguaccuccauuucaagagccagaaccagcccuacugcauuauccugucgggggucaaaauccggcgggcaacgaagugcaagagggucuuggugaaaugagcggaguauuugagcuggcacgggcacgcacucuucuccgugaugcuccauguuggcgauggaaauggggugcccccacccgucuugnnacncggaccaaggagunanacagacgcgcaagggaggagauauggccaguacuucucucguacugaaagggagaugcaaaaugcaucuguggugugcacacgucaaauccguuugauuugcccaacaccgaccggcccuccguggguugcguuggagugugccngnuuggacccnanagguggugaacuaugccugaacaaggugaagcccggggaaacccagguggaggccuguagcgaugcugacgugcaaaucgcucguaugauuugggunucgnagcgaaagacucaucgaaccaccuaguagcugguucacaucgaaguuucccucaggauagcuggugcuaguagaaguauugugcgguaaagcgauacuuuaaangugcaaacaaaccggccuuagccaacugcaaggccggaaagaaaagaauuagaggcaccaagugggccuucuucgguaagcngagcaggcgaugcggaaugaaccgcuuagggauauguggcgucaaaacuuaugggcucauucucgauacguaaaggguguugguggccaccggccccgaaaauggangacgcuuaaggccaauuagugaaugcccauuauuccuuugguaagggcggaaacggagaaaguguagcccuuccgauguagauguggccuggagguuaggacgaagcuuauggcgugagccuaagauggaccggccucuagugcanaunuugguuggcgunncaaagaucuaanggagauauacucaacaugcaacguuggauacuggagcggggaaggauuucgugccaacggcacucguacacganuuguucggaaacugagcacaacguuauaucgunuuguuaggaaagugaaguacugaaaaggggcaacagagaaccugggauuauauuccaaaaagaaauugcauguggg ......................<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<<......<<.....>>....>>>>>>...<<<...<<<<<..<.<<<<<......>>>>>..>....>>>>>..........<<<<<<...<<<<<<<<.<<<<<......<<<......<<<<.......>>>>.....<<........>>......>>>.<<.......((.....>>)).....>>>>>...>>>..>>>>>.>>>>>>..........<<<<<<<........>>>>>>>......<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................(((..<<<<<<.<<<<<.....<<<<<.<<<<<<<<<...<<<<<..<<<<<<<<<........>>>>>>>>>.....>>.>>>...>>>>>..>>>>........<<<<<.....<<....<<.<..>...>>..>>..>>>>>.....<<<<...>>>>>.....>>>>>>>>>>>..))).<<<<........>>>><<<<<<....<<<<<<<.<<<<<..<<<<..<<.<.........>>>..>>>>...<<....>>..<<<<<.....>>>>>...<<<<<...<<.<<<<<<....>>>>>>.>>....>>>>><<<<<<<<<.....>>>>>>.>>>...>>>>>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.....<<...<<<<<<<...<<<.....>>.>...>>>>>>>.....<<<<<<<<.<<.....>>>>>>>>>>...........>>...>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<<<<......[..((.(........(.........<<<.<<<<<<<..>>>>>>>>>>..........>>>.)....).)).].........>>>...>>>>>>>((((.<<<<<.......>>>>.........>>>>>))))....>>>>>..<.<<<<<<<<........<<<<..<<<....>>>.>>>.>.....>>>>>>>>..>.....>>>>>>..............<<<<<<<....................>>>>>>>....................<<<<<....<<.....>>..>>>>>....<<..........<<.<<<<<......>>>>...............<....>......>.>>..........<<<<.........>>....>>.>>........... ......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((((..((((..((.(((((......)))))..)....)))))...........(((((...((((((((.(((((....({((.......((((.......)))).....((........)).......)))[[(...)..((....}]])).....)))))...)))..))))).)))))......)....(((((((........)))))))......(((((........)))))..)))....................................((....)).............(..((.(....).))............)......................((..((((((.((((((....(((((.((((((((....(((((..((((((((..........)))))))).....)).)))....))))..))))........(((.(.....((...(((.(..)...)).)))..).))).....[[[....)))))...).)))))))))))..))..(((..........)))((((.(....(((((((.(((((..(((...((.((.(..)..))))...)))...((....))..(((((.....)))))...(((((...((.((((((....)))))).))....)))))(((((((((.....)))))).)))...))))).)))))))..((.(...((((((.....((((((((((.((((...(((.(((....))).)))...).)))...(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).).((((((((.....((.(.((((((....(((.....)).)....)))))).....(((.((((.((.....)))))).)))..........)))...))))))).)...((((.((.((.....)).)).))))....(((......)))...((((((....((([[[...(..(..((.(........(.........(((.(((((((()))))))))))..........]]].)....).)).))........)))....))))))((((.((((((.......]]]...).....)))))))))....))))).)(.((((((((.(......((((..(((....))).))).)...).))))))))..).....).))))..............(((((((....................)))))))....................(((((....((.....))..)))))....((......(...((.(.(((......)))............................).))....).....((((.........))....)).))........... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT; LSUa_rRNA_chain_1 8any AA 954 2.85 RF00177 URS00008F947B_9606 39134711 0003735 0005840 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA; 12S mitochondrial rRNA 8any A 1558 2.85 RF02541 URS00021ED93A_9606 39134711 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..<.....>..>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<................<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>........>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<<<........<<<....>>>.......>>>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>......>..........<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(((........(((....))).......)))......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......(.((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))..).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA; 16S mitochondrial rRNA 8apn A1 109 3.1 URS000261776F_353565 36253367 353565 ugugaccguuagcgcauaguacaguaauggaagugcauaaaccaaauuaaaggcuuaaauuaaaaauaaaauggcuggugcaauggcacaaaaaauaagaaaguuuaaa <<<<.<<..............<<....>>....<<<<....<<<...........................>>>....>>>>..>>>>>>................... ((((.((..............((....))....((((....(((...........................)))....))))..))))))................... Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-1 8apn A3 207 3.1 RF02541 URS000261778D_353565 36253367 0003735 0005840 353565 uuacaggcauuuaauucgaagcauagcgagcuaacguuuagcagguuugcauaaauuaaauauauuaaaaaagcaagaccgcaaagguuucuguagcaauagaaucuugugacuuaacguuaggggcgauaaaccaaucacgcuauggcauagcuaaguuucugcgaaauauauuuagguauagcuuaaaaaacuuuauagauaaaa ..............<<.<..<<<<<<<.....<<<<<<.<<..<<<<<<<.....<<<<.....>>>>....>>>>.>>>...<<<..<<<<........>>>>.>>>....>>.>>>>>>...<<.......>>......>>>>>>...>..>.>>............<<<<<....>>>>>........................ ..............((.(...((((((.....((((((.(((.(((((((.....((((.....))))....)))).)))...(((..((((........)))).)))..).)).)))))).(.((.......))...)..))))))......).))............(((((....)))))........................ Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-3 8apn A4 73 3.1 URS000261775F_353565 36253367 353565 uaagucagacgcaaagcuacaagguuucgcgucaaaaggaaaaaaguccgccagcgaggcuaagguacauaaa .......<<<<<.<<<<......>>>>.>>>>>....<<<......>>>........................ .......(((((.((((......)))).)))))....(((......)))........................ Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-4 8apn A6 109 3.1 URS0002617763_353565 36253367 353565 gcagguagcagaacguucuauauaauagaauugcuaaugcugguauaaguaacuauguaaaaauacagcuaagcuaaagguuuugcgcaacagugaaacgauaaaguaa .............<.<<<<<<...>>>>>>..>.......................<<......>>.................<<.....>>................. .............(.((((((...))))))..).......................(((....))).................((.....))................. Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-6 8apn A7 534 3.1 RF02541 URS0002617777_353565 36253367 0003735 0005840 353565 aaucguaccgcaaaccaacacagguuaguuauuguaaaggcuguauaaaaccaggauaaaggaacucggcaaaauagguuauguuuucguacaaaaccacaacaaaaguagugacuguuuaccaaaaacacaagacucugcuaacacuuauaguggaaguauagugucugauaccugcccaaaggcaaagcaaacggcagcuguaacucuaacggcucuaagguagcaaaauuccauggcauuuaaaugaugucccgcaugaaugguauaacaacuucuuaacugucucuauucuggauuaggcgaacuuuaaaugcuugugcagaugcaggcuagcuaacaagggacgaagagacccuaugcagcuuuagggcagguuauuauucaauaaacuaccuuuuuucugggacggacgcucuuauuaaagaaacaagagugagcaaugguuuuuacuaauuauaaaaaagaaaagcuuaacugcaauacaaacaauuaaagcaggggcauugucggcaauaaugcauugaagaaaua ..............<<......>>...................<<.....<<<<<<<<.<<.........<.....<<<<.<<<......>>>.>>>>.......<<<.<<<<..<<<.........>>>..<<<<.<<.....<<<.....>>>.......>>.>>>>.<<<<<.<<<.....<<...>>....>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>.>>>...>..>>.>>>>>>>>..>>..............<<<<<........>>>>>....................................<<<<..<<<<<<<....>>>>.>>>.>>>>...<<<.....>>>.<<<<<<...........>>>>>>..<<...<<<<<<..<.....((......>.>>>>>>...<<<<..<<........>>..>>>>.<<<...>>>.>>.))................. ..............((......)).........[.........((.(...((((((((.((..(....(.......(((..(((..{...)))..))).].....(((.((((...((.........))...((((.((.....(((.....))).......)).)))).}((((.(((.....((...))....)))(((((.........)))))........((..........((((((.....))))))..)..)....))))...)).)).)))..)..))).)))))))).)))...........[..(((((......].)))))....................................((((..(((((((....)))).))).))))...((......[))..(((((..........])))))...((...(((((((.((....[[.....)))))))))...((((..((........))..)))).(((...))).)).]]................. Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-7 8apn A8 350 3.1 RF02541 URS0002617774_353565 36253367 0003735 0005840 353565 cguucuucaaccaacggaauaaagcuacgcuagggauaacaggcuuauucgcucacagaguuuuaucgacgagcgcgguuggcaccucgauguuggaucaccgcuuccuguagcugcaaacgguuauaaggguuagacuguucgucugauaaugcgguacgugaucugaguucaaagcgucguaagacaguuugguuucuaucuuuguuagcauaaguauuacggcguuguguacaguacgaaaggauuguugcacaauuaaccaauaguuuaaagagcaacguuaauaaaccggaaaacuuuuaacugcacugugcaguugcaggcaaagcaauguucagcuaaaaaaa .........................................<<<<.<..<<<<<...<<......>>...>>>>>....>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>.....................<<<<.<<.<<<...<<<<<<.................>>>>>>.<<<<<.....<<.......>>...>>>>>....>>>..>>>>>>...................<<..<<<......>>>...>>........ ........................................(((((.(..(((((...((......))...)))))....)))).).).....(((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).))....(((((((....))).)))).....................((((..(.(((...(((((((....(....)....).)))))).(((((...(.((.......)).).)))))....))).)..))))...................((.((((......))).).))........ Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtLSU-8 8apn B1 102 3.1 URS0002617782_353565 36253367 353565 cauaggguuugguuuuugcccagccuuuagcuuagcguuaagcuuauacaugcuagccuaaaagacggcgcacaggugcauauuuuguaagcauguaaaaua ....<<<<.........>>>>..................................<<<........>>>................................. ....((((.........))))..................................(((........)))................................. Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtSSU-1 8apn B2 210 3.1 RF00177 URS0002617758_353565 36253367 0003735 0005840 353565 aaaguguacuuuauaaagucauuguauugcuuacaaauaacuaggcaguugggucggcugcuauacuauagcgccccaagccugauaauuagcuaggcguaacagcggcaagccacaguagcacauaaaaauugcuaccguuaacgcagcaguaagaaagauuggacaauagcuuaagggcagauccagguaagcgcuaaaaucuuugug ..<<<<.<<<<....>>>>>>>>.............<<.....<<<..<<<<<.<<...............>>.>>>>>>>>.....>>..<<<..<<......>>....>>>....<<<<<<.........>>>>>><<<..>>>.................<<<...<.<<<....>>>..>>>>....................... ..((((.(((......))))))).............((.....(((..(((((.((...............)).)))))))).....))..(((..((......))....)))....((((((.........))))))(((..)))...............(.(((...(.(((....)))..)))))...................... Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtSSU-2 8apn B3 379 3.1 RF00177,RF01959,RF02542,RF01960 URS0002617754_353565 36253367 0003735 0005840 353565 gagcuccggcuaauugugugccagcagccgcgggaauacacaaggggccaguuuaagguuaaaacaaggcaacgguguuuaaaaacuggaaaugcgccuaaaauagcuuaaugcguuggaguaaggguuaaaucuguaaaaaccuugcagaaagccuuaaaguaaaagcagcuauucaugcccauaaaacagucuauaaacgagagcugcgguagcaaaacggauuagauacccguguagucccagccguaaauuauuuauuaaauuaaagcgccuagcgauauugccuauggcacuaaacuagggaaucugacagcauuaaacugacgcgguggagcauacuucuuaauuugauaauacgcaaaaacauuaccacgau ..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>...................<<<......<<<<<...<<.....<<<.<<.<..<<<<<<<<..<<<...<<....<<<......>>>.......>>..>>>..>>.................>>>>>>.>.>>.>>>......>>...>>>>>....<<<<.<...<<...<<<<.<.....>.>>>>...>>>.>>>>.........<<<<......>>>>..>>>.<<......<<<<...>>>>.....>>.................................................<<........>>................ (.((((([[[...(((((.....((.]]])).......)))))))))))..................(((....(.((((....((.....(((.((.(..((((((((..(((...((....((........)).......))..)))..)).................)))))).).)).)))......))....))))....((((.(...((...((((.........))))...))).)))).........((((......)))).)))).((......((((...)))).....)).................................................((........))................ Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtSSU-3 8apn B4 337 3.1 RF00177,RF01960,RF02542,RF01959 URS000261777E_353565 36253367 0003735 0005840 353565 aaaccacgguauugcauggcugauauauaauccauacaaaggauauaaccaaguagcauggucuuauauugugggcuggcggugugcuacaaguaacaaaaaguacaaccggauuaauuacugaaaucauaaauauaaagagggaaucgcuaguaaucuuuauuauaacauaaaggugaaccaguuuagugugcacacacugcccgucacauccgggaaaaccacaaagcccuaaguuuguauaguguuuaauaaaccaauucaaacauaagcuuauuguuaacaaggaugaagucguaacaagguuugcguaggggaaccugcucaagauuaugcu .......<<.<<...<<<<<<.....<<<.<<<.......>>>>>>.....>>>..>>>.>>>>...............................<<.....>>.....<....<<.<<<.........>>>.>>....>...............<<<<<<<<......>>>>>>>>........................<..<<.<.<<<<<..<..<<<.<..<<<<....<<<<<<.<<.<.<<.......>>>.>>.>>>>>.>..>>>>.>.>>>..>..>>>>>..>.>>...>.....<<<.<<<<<....>>>>>.>>>......... .......((.(((...((((((....(((.(((.......))))))...).)))..)).))))).........................(.....((.....)).....(....((.(((.........))).))....)..)............(((((((((...).))))))))......................(.(..((.(.(((((..(...((.....(((.....(((((.((.(.((.......))).)).)))))....)))....))...)..)))))..).))...)..)..(((.(((((....))))).)))......... Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site; mtSSU-4 8apo A1 109 3.2 URS000261776F_353565 36253367 353565 ugugaccguuagcgcauaguacaguaauggaagugcauaaaccaaauuaaaggcuuaaauuaaaaauaaaauggcuggugcaauggcacaaaaaauaagaaaguuuaaa <<<<.<<..............<<....>>....<<<<....<<<...........................>>>....>>>>..>>>>>>................... ((((.((..............((....))....((((....(((...........................)))....))))..))))))................... Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-1 8apo A3 207 3.2 RF02541 URS000261778D_353565 36253367 0003735 0005840 353565 uuacaggcauuuaauucgaagcauagcgagcuaacguuuagcagguuugcauaaauuaaauauauuaaaaaagcaagaccgcaaagguuucuguagcaauagaaucuugugacuuaacguuaggggcgauaaaccaaucacgcuauggcauagcuaaguuucugcgaaauauauuuagguauagcuuaaaaaacuuuauagauaaaa ..............<<.<..<<<<<<<.....<<<<<<.<<..<<<<<<<.....<<<<.....>>>>....>>>>.>>>...<<<..<<<<........>>>>.>>>....>>.>>>>>>...<<.......>>......>>>>>>...>..>.>>............<<<<<....>>>>>........................ ..............((.(...((((((.....((((((.(((.(((((((.....((((.....))))....)))).)))...(((..((((........)))).)))..).)).)))))).(.((.......))...)..))))))......).))............(((((....)))))........................ Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-3 8apo A4 73 3.2 URS000261775F_353565 36253367 353565 uaagucagacgcaaagcuacaagguuucgcgucaaaaggaaaaaaguccgccagcgaggcuaagguacauaaa .......<<<<<.<<<<......>>>>.>>>>>....<<<......>>>........................ .......(((((.((((......)))).)))))....(((......)))........................ Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-4 8apo A6 109 3.2 URS0002617763_353565 36253367 353565 gcagguagcagaacguucuauauaauagaauugcuaaugcugguauaaguaacuauguaaaaauacagcuaagcuaaagguuuugcgcaacagugaaacgauaaaguaa .............<.<<<<<<...>>>>>>..>.......................<<......>>.................<<.....>>................. .............(.((((((...))))))..).......................(((....))).................((.....))................. Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-6 8apo A7 534 3.2 RF02541 URS0002617777_353565 36253367 0003735 0005840 353565 aaucguaccgcaaaccaacacagguuaguuauuguaaaggcuguauaaaaccaggauaaaggaacucggcaaaauagguuauguuuucguacaaaaccacaacaaaaguagugacuguuuaccaaaaacacaagacucugcuaacacuuauaguggaaguauagugucugauaccugcccaaaggcaaagcaaacggcagcuguaacucuaacggcucuaagguagcaaaauuccauggcauuuaaaugaugucccgcaugaaugguauaacaacuucuuaacugucucuauucuggauuaggcgaacuuuaaaugcuugugcagaugcaggcuagcuaacaagggacgaagagacccuaugcagcuuuagggcagguuauuauucaauaaacuaccuuuuuucugggacggacgcucuuauuaaagaaacaagagugagcaaugguuuuuacuaauuauaaaaaagaaaagcuuaacugcaauacaaacaauuaaagcaggggcauugucggcaauaaugcauugaagaaaua ..............<<......>>...................<<.<...<<<<<<<<.<<.........<.....<<<<.<<<......>>>.>>>>.......<<<.<<<<..<<<.........>>>..<<<<.<<.....<<<.....>>>.......>>.>>>>.<<<<<.<<<.....<<...>>....>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>.>>>...>..>>.>>>>>>>>.>>>..............<<<<<........>>>>>....................................<<<<..<<<<<<<....>>>>.>>>.>>>>...<<<.....>>>.<<<<<<...........>>>>>>..<<...<<<<<<..<.....((......>.>>>>>>...<<<<..<<........>>..>>>>.<<<...>>>.>>.))................. ..............((......)).........[.........((.(...((((((((.((..(....(.......(((..(((..{...)))..))).].....(((.((((...((.........))...((((.((.....(((.....))).......)).)))).}((((.(((.....((...))....)))(((((.........)))))........((..........((((((.....))))))..)..)....))))...)).)).)))..)..))).)))))))).)))...........[..(((((......].)))))....................................((((..(((((((....)))).))).))))...((......[))..(((((..........])))))...((...(((((((.((....[[.....)))))))))...((((..((........))..)))).(((...))).)).]]................. Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-7 8apo A8 350 3.2 RF02541 URS0002617774_353565 36253367 0003735 0005840 353565 cguucuucaaccaacggaauaaagcuacgcuagggauaacaggcuuauucgcucacagaguuuuaucgacgagcgcgguuggcaccucgauguuggaucaccgcuuccuguagcugcaaacgguuauaaggguuagacuguucgucugauaaugcgguacgugaucugaguucaaagcgucguaagacaguuugguuucuaucuuuguuagcauaaguauuacggcguuguguacaguacgaaaggauuguugcacaauuaaccaauaguuuaaagagcaacguuaauaaaccggaaaacuuuuaacugcacugugcaguugcaggcaaagcaauguucagcuaaaaaaa .........................................<<<<.<..<<<<<...<<......>>...>>>>>....>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>.....................<<<<.<<.<<<...<<<<<<.................>>>>>>.<<<<<.....<<.......>>...>>>>>....>>>..>>>>>>...................<<..<<<......>>>...>>........ ........................................(((((.(..(((((...((......))...)))))....)))).).).....(((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).))....(((((((....))).)))).....................((((..(.(((...(((((((....(....)....).)))))).(((((...(.((.......)).).)))))....))).)..))))...................((.((((......))).).))........ Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtLSU-8 8apo B1 102 3.2 URS0002617782_353565 36253367 353565 cauaggguuugguuuuugcccagccuuuagcuuagcguuaagcuuauacaugcuagccuaaaagacggcgcacaggugcauauuuuguaagcauguaaaaua ....<<<<.........>>>>..................................<<<........>>>................................. ....((((.........))))..................................(((........)))................................. Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtSSU-1 8apo B2 210 3.2 RF00177 URS0002617758_353565 36253367 0003735 0005840 353565 aaaguguacuuuauaaagucauuguauugcuuacaaauaacuaggcaguugggucggcugcuauacuauagcgccccaagccugauaauuagcuaggcguaacagcggcaagccacaguagcacauaaaaauugcuaccguuaacgcagcaguaagaaagauuggacaauagcuuaagggcagauccagguaagcgcuaaaaucuuugug ..<<<<.<<<<....>>>>>>>>.............<<.....<<<..<<<<<.<<...............>>.>>>>>>>>.....>>..<<<..<<......>>....>>>....<<<<<<.........>>>>>><<<..>>>.................<<<...<.<<<....>>>..>>>>....................... ..((((.(((......))))))).............((.....(((..(((((.((...............)).)))))))).....))..(((..((......))....)))....((((((.........))))))(((..)))...............(.(((...(.(((....)))..)))))...................... Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtSSU-2 8apo B3 379 3.2 RF00177,RF01959,RF02542,RF01960 URS0002617754_353565 36253367 0003735 0005840 353565 gagcuccggcuaauugugugccagcagccgcgggaauacacaaggggccaguuuaagguuaaaacaaggcaacgguguuuaaaaacuggaaaugcgccuaaaauagcuuaaugcguuggaguaaggguuaaaucuguaaaaaccuugcagaaagccuuaaaguaaaagcagcuauucaugcccauaaaacagucuauaaacgagagcugcgguagcaaaacggauuagauacccguguagucccagccguaaauuauuuauuaaauuaaagcgccuagcgauauugccuauggcacuaaacuagggaaucugacagcauuaaacugacgcgguggagcauacuucuuaauuugauaauacgcaaaaacauuaccacgau ..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>...................<<<......<<<<<...<<.....<<<.<<.<..<<<<<<<<..<<<...<<....<<<......>>>.......>>..>>>..>>.................>>>>>>.>.>>.>>>......>>...>>>>>....<<<<.<...<<...<<<<.<.....>.>>>>...>>>.>>>>.........<<<<......>>>>..>>>.<<......<<<<...>>>>.....>>.................................................<<........>>................ (.((((([[[...(((((.....((.]]])).......)))))))))))..................(((....(.((((....((.....(((.((.(..((((((((..(((...((....((........)).......))..)))..)).................)))))).).)).)))......))....))))....((((.(...((...((((.........))))...))).)))).........((((......)))).)))).((......((((...)))).....)).................................................((........))................ Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtSSU-3 8apo B4 337 3.2 RF00177,RF01960,RF02542,RF01959 URS000261777E_353565 36253367 0003735 0005840 353565 aaaccacgguauugcauggcugauauauaauccauacaaaggauauaaccaaguagcauggucuuauauugugggcuggcggugugcuacaaguaacaaaaaguacaaccggauuaauuacugaaaucauaaauauaaagagggaaucgcuaguaaucuuuauuauaacauaaaggugaaccaguuuagugugcacacacugcccgucacauccgggaaaaccacaaagcccuaaguuuguauaguguuuaauaaaccaauucaaacauaagcuuauuguuaacaaggaugaagucguaacaagguuugcguaggggaaccugcucaagauuaugcu .......<<.<<...<<<<<<.....<<<.<<<.......>>>>>>.....>>>..>>>.>>>>...............................<<.....>>.....<....<<.<<<.........>>>.>>....>...............<<<<<<<<......>>>>>>>>........................<..<<.<.<<<<<..<..<<<.<..<<<<.....<<<<<.<<.<.<<.......>>>.>>.>>>>>....>>>>.>.>>>..>..>>>>>..>.>>...>.....<<<.<<<<<....>>>>>.>>>......... .......((.(((...((((((....(((.(((.......))))))...).)))..)).))))).........................(.....((.....)).....(....((.(((.........))).))....)..)............(((((((((...).))))))))......................(.(..((.(.(((((..(...((.....(((.....(((((.((.(.((.......))).)).)))))....)))....))...)..)))))..).))...)..)..(((.(((((....))))).)))......... Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites; mtSSU-4 8auv h 1626 2.38 RF01960,RF02542,RF01959,RF00177 URS000268141E_4097 37156858 0003735 0005840 4097 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcauguguaaguaugaacaaauucagacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguaucuacuacunggauaaccguaguaauucuagngcuaauacgugcaacaaaccccgacuucuggaagggaugcauuuauuagauaugcnaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguggugacgggugacggagaaunaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccaauccugacacggggaggunguganaauaaauaacaauaccggcugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcggnaauuccagcuccaauancguanauuuaaguugnugcaguunaaaagcucguaguuggacuuugggaugucccguuacuuugaagaaauuagagugcucaaagcaagccuacgcucuguauacauungcaugggauaacauuauaggauuucgguccuauuucgggaucggaguaaugauuaacagggacagucgggggcauncguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggcaccuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacggggaaacuuaccagguncagacauaguaagganugacagacugagagcucuuucuugauucuauggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccguuaacgancgagaccucagccugcuaacuagcuaugcggagguaucccuucgcggccagcuncuuagagggacuacggccuuuuaggccgcggaaguuugaggcaauaacangucugugaugcccnuagauguucugggccgcacgcgcgcuacacugauguauucaacgaguuuauagccuuggccgacaggcccggguaaucuuugaaauuucaucgugauggggauagaucauugcaauuguuggucuucaacgnggaauuccuaguaagcgcgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgnccgucgcuccuaccgauugaaugauccggugaaauguucggaucgcgcgagaaguccauugaaccuuaucauuuagagganggagaagucguancaagguuucnguaggugnnccugcggaaggaucauug ...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<...........>>...>>.>>......<<........<<<..<<..<<....<<<<<............<<.....<..<<<.....>>>..>......>>........<.<<<..<<...>>..>>>.>....<<<<<<................>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<..>>>>>.>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<<.....<<<..>>>.<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>........<<<<<<<<<<<.....>>>>>>>>>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.<..>>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<<....>>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>.......>>>>>....>.>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>.......>.>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<>>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))...(..(((((...(.(....(.....(((.(((..((....((....((...........))...))[))......(((.......(.(...(..((....(((((........[...((.....(..(((.....)))..)......))..........(((..(.....)..)))..(((.((.(((.......(......).))).)).).).).(]((((..(((.))).))))).)))))...)))...).).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(..(....)..)...)))))).).....(.(((....(((.]...)))..))))......).).....((((((((()))))).)))....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))).).....[......(.([[...(.(.((...(.(..(....((((..))))(((.((.((........(..((.......)).(((....))).....).......)).))...)))........(((((.((.((.....)).)).))))).....)....(((..((..(...(((...(((.(((((((....((........)).......))))))).))).......((....))....)))..)..))...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{....((.((.(((..((((((((.(((.(..))))))))))))..)))...((..]]))...))...].)).)).).(((......((((....))))....)))...]]].]((((..(((((((..((..(((((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..((((......))..(.((......)))...))..))....(((((.((..((((..((((.((((((((....))))))))...))))..)))).))..(..(((((.....))))).....)..)))))....))).))).....).))))).....).)))))...)).)))..))).(...((((.(.......((.......(((.((((....)))).)))....)).......).))))......(....(((((............)))))....)..)..)))))......(((((((.......))))))).......))...))))))).)).))..(.(..((.(.(((((.((..(.(((((((..(((..((((..(...(((())))...)..))))..)))..))))))))..)).)))))..).))...)..)..(((((((((....)))))))))}........ Cryo-EM structure of the plant 40S subunit; 18S rRNA 8azw A 3196 2.14 RF02543 URS0002681419_4097 37156858 0003735 0005840 4097 gcgaccccaggucaggcgggacuacccgcugaguuuaagnauancaanaagcggaggaaaagaaacuuacaaggauuccccuaguaacggcgagcgaaccgggaacagcccagccuuagaaucgggcggcuccgccguucgaanuguagucuggagaagcguccucagcggcggaccgggcccaaguccccuggaagggggcgccagagagggugagagccccguugugcccggacccugucgcaccacgaggcgcugucuacgagucggguuguuugggaaugcagcccaaaucnggcggugaauuccguccaaggcuaaauacgggcgagagaccgauagcgaacaaguaccgcgagggaaagaugnaaaggacuuugaaaagagagucaaagaguncuugaaauugucgggagggaagcggaugggggccggcgaugcgccccggucggauguggaacggugacgagccgguccgccgaucgacucggggcguggaccagcguggauugggggggcggccaaagcccgggcuuucgauacgcccguggaacgccgucuccuugauugugguaggcagcgcgcgccuccggcgugcuucggcaucugcgcgcuccggacgcuggccugugggcuccccauucgacccgucuugnaacncggaccaaggagunngacaugugugcgagucaacgggcgaguaaacccguaaggcguaaggaagcugauuggugggaucccccugaggggugcaccgccgaccgaccuugaucuucugugaaggguncgagugugagcauaccngucgggacccnanagauggugancuaugccugagcggggcgaagccagaggaaacucugguggaggcccgcagcgauacugncgugcaaaucguucgucugacuuggguauagnggcgaaagacuaaucgaaccgucuagungcugguucccuccgaaguuucccucaggauagcuggagcucgcgugcgaguucuaucggguaaagccaaugauuagaggcaucgggggcgcaacgcccucgaccuauucucaaacuuuaaanagguaggacggugcggcugcuuuguugagccgcaccacggaaucaagagcuccaagugggccauuuuugguaagcngaacuggcgaugcgggaugaaccggaagccggguuacggugccaaacugcgcgcuaaccuagaucccacaaaggguguuggucgauuaagacagcgccgaaucaacuagccccgaaaauggauggcgcuuaagcgcgcgaccuacacccggccgucggggcaagugccaggccccgaugnguaggagggcgcggcggucgcugcaaaaccuugggcgcgagccugggcggagcggccgucggugcagaunuuggugguagunncaaauauucaaaugagaanuuugaaggccgaagaggggaaagguuccaugugaacggcacuugcacauggguuagncgauccuaagggucgggggaaccccgacagauagcgcguuucgcgcguacuccgaaagggaaucggguuaaaauuccugaaccgggacguggcgguugacggcaacguuaggaaguccggagacgucggcgggggccucgggaagaguuaucuuuucuguuuaacagccugcccacccuggaaacgacucagucggagguaggguccagcggcuggaagagcaccgcacgucgcgugguguccggugcgcccccggcggcccuugaaaauccggaggaccgagugccguccacgcccggucguacucauaancgnaucangucuncaaggugaacagccucuggucgauggaacaanguaggcaagggaagucggcaaaauggauccguaacuucgggaaaaggauuggcucugagggcugggaacagccaacucagaacugguacggacaagnngnauccgacuguuuaauuaaaacaaagcauugcgauggucccugcggauguuuacgcaaugugauuucugccnagugcucugaaugucaaagugangaaauucaaccaagcncggguaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaunuaauuagugacgcgcaugaauggauuancgagnuucccacugunccugucuacnauccagcgaaaccacagncaagggaacgggcuuggcagaaucancggngaaagaagacccunnugagcuugacncuaguccgacuuugugaaaugacuugagaggguaguauaagugggagccggcgaaagugaaauaccacuacuuuuaacguuauuuuacuuauuccgugaaucggaagcggggcacugccccucuuuuuggacccaaggcuugcuugcaggccgauccgggcggaagacauugucagguggggaguuuggcugnggcggcacaucuguuaaaagnuaacgcaggnnuccuaagaugagcucaacgagaacagaaaunucguguggaacagaaggguaaaagcucguuugauncugauuuccagnacgaanacgaaccgugaaagcguggccuaacgauccuuuagaccuucggaauucgaagcuanangugucagnaaaguuaccacagngauaacuggcuuguggcagcnaagcguucauagcgacguugcuuuuugauccuungaugucggnucunccuaucauugugaagcagaauucaccanguguungaunnuucacccaccaauagggaacgugngnugggnuuagancgucgugagacagguuaguuuuacccuacugaugacagugucgcaauaguaauucaaccuaguacgagaggaaccguugauucgcacaauuggucaucgcgcuugguugaaaagccaguggcgcgaagcuaccgugcgcuggauuaugacugaacgccucuaagucagaauccgggcuagaagcgacgcaugcgcccgccguccgcuugccgacccgcaguaggggccuuuggcccccaagggcacgugucguuggcuaagucaucguggcggaagagccgcgguggccgccuugaaguacaauuuccaucgagcggcggguagaanccuuugcagacgacnuaaauacgcgacgggguauuguaaguggcagaguggccuugcugccacgauccacugagauucagcccuuugucgcuccgauucgu ........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<.......<.....>......>>>>>..[[[....<......<<<<<<<<<...>>>>>>>>>......>.....<<<<<<<<.<<<.<<<<<<<.<<<<<<.<<...<<<<......>>>>.((......<<<.....))>>>..>>.>>>>>>...>>>>>>>.....>>>>>>>>.>>>.......<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<<<<<......<<<<<<<<<<<<...<<<<<.<<<<.....>>>>.>>>>>....>>>>.>>>>>>>>.<.<<<<<<..<<<<<<<<<<<<<<<.....<<<<<<<.........>>>>>.>>...>>>>>>>>>>>>>>>.........<<<<<<<<<<...>>>..<<....>>....>>>>>>>.....>>>>>>.>....>>>.>>>>>>>>>..<<<<........>>>><<<<<<.....<<<<<.<<<<<<..<<<...<<<........>>>....>>>...<<....>>....<<<<<...<<<<....>>>>....>>>>>.<<<<<<<.....<....>.....>>.>>>.>>....>>>>>>.>>>>>...<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<......<<.<<<<<<<.....<<<....<<<....<<<....<<<<<<.....>>>>>>..>>>....>>>..>.>>.....>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.......<..........<<<.<<<<<<.<<<.......<..>...>>>.>>>>>>>>>..........))).>....>>>>>>.>>>...>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<<<.......<<<.<<<<....>>>>>>>....>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<...>>>>>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<<...<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<.<<<<.......>>>>.><...<<<<<.....<<<<<<....<<<<...>>>>....>>>>>>.....>>>>>....><<<<<<<.......>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>>.>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<.<..<<<.....<<<<....>>>>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<.<<<...<<<<<<<<<<.<<<<<<.........<<<<.<.<<<>>>............>>>>>.>>>>>>..>>>>>>>>>>...<<<<<.....<<<<...<<<<<...>>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>......>>>.>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<.<<<<<......>>>>>...>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<..<<<<.<.<<<<<.................>>>>>.><<<<<...<<<<....<<<<<<<<<......>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>...>>>>>>>....<<<<<<<<<.<<.<......<<.......<<<<<<...>>>>>>....>>...........<<<...<<<<<<<<<<<......>>>>>>>>>>>.>>>................>.>>.>>>>>>>>>.<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<.<..<<<<<......>>>>>..>>>>>...>>>....>>>>..>>>>>...>>>>>.. ........................(((((......(...[.{).......)))).).........((....))...((((.......(.].}.)......))))...((((.........((((((((((...)))))))))....)........(((((((.(((.(((((((.((((((.(..({((((......)))))[[(...).(((....}]])))...).))))))...))))))).....)))))))).))...)....(((((((........))))))).....((.((..[[[[[[)).))..)))..................................((....))............(..((((....))))............).....................((.(((((((((..(...((((((((((((...(((((.(((.......))).)))))....)))).)))))))).(.(((((((.((.((((((((((((.....(((((((.........))))).))...)))))))))))).)).........((((((((((...)))(.((....))..).)))))))....))))))).)...)))).)))))).)).[((((........))))((((((....((((((.(((.((..(((...(((........)))....)))...((....))....(((((...((((....))))....))))).(((((((.....(....).....)).))).))....)).))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....((..((.(..........))).))...).))))))))).(.((.......))...)..))))))......).))..((((((....(..((....))..)((((((((((......((.(((((.(......((.....(...(.(((....((((((.....))))))..))).)...)...)).......).)))...(((((((((.(......))))))))))....))))..)))))))).))..((((....((.....))....))))....(((......)))...(((((((...((([[[...(.((((((.......(..........(((.((((((.(((.....{........))).)))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((((.......(((.((((....)))))))....))))))))))..).....))))))((.....((.....((((.(.......).))))((((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(((.(((((....)))..).)...(((((...)))))...).))....))...(((((........)))))]]((((.((((((((..((((....)))...(..<((((((...((((.(((((((((((((.(((....{{...))).)(...((((((....(((((.....(((.....))).....)))))...).)))))....)(((((((.......))))))))))).).))))))).))))(...)....))))))...)).....)))).)))))))).))).))).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.{..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.].(...........)...(((((((....((((....))))......))))))).}.(.(.(((..((((((.(...(......((((....))))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).)))))))..))))))....)).{..(((((.....]}.)))))....(((((..(((.((......((((.(((((...(((((.(((.(((...((((((((((...((((..[......(((....((())).......]......))).))))....))))))))))...(((((.....((((.(.((((.....)))).).........>...((((((....))))))..))))..)))))......))).)))..)))))..(((......[)).)..((((..........]))))..([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(.(((..((((....{..))))..))))((......)).))]]].......((((((..((((.]]]]]]))))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(((.(.(((......))).)...))).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).)))))....(((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))...)))))))....(((((((((.((.(....(.((.......((((((...))))))....)))..........(((...(((((((((((......))))))))))).)))................).)).))))))))).(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..)..)))))..)))))...)))....))))..))))))..))))).. Cryo-EM structure of the plant 60S subunit; 25S rRNA 8azw B 163 2.14 RF00002 URS000268141B_4097 37156858 0003735 0005840 4097 aaacgacucucggcaacggauaucucggcucucgcaucgaugaagnacguagcgaaaugcgauacuuggugugaauuncagaauuccgugaaccaucgagucuuugaacgcaaguugcgcccgaagccauuaggccgagggcacgucugccugggcgucacgc ............................................<<<<<<.((.....>>>....<<<<<<<.....))............>.>>>>.>>..>>>....<<.....>><<<<...<<......>>...>>>>..................... ............................................((((((.[[.....))).....((.(((.....]]............).)).).)...)))....((.....))((((...(.(.....))...))))..................... Cryo-EM structure of the plant 60S subunit; 5.8S rRNA 8b0x A 1500 1.55 RF00177,RF01959,RF02542,RF01960 URS00019B7399_37762 36841832 0003735 0005840 37762 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaauucgcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugcgaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauc .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<..>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>.......>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((())).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(..(.((((((((.......)))))))).)...)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...()..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}.... Translating 70S ribosome in the unrotated state (P and E, tRNAs); 16S rRNA 8b0x a 2748 1.55 RF02541 URS00026177A6_37762 36841832 0003735 0005840 37762 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacagcugugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugugaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcggcgcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguuggccccugaucgggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacuccuugagaguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<..>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<<.>>>...>>>>>..>....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..(((((())))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..(((.)))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Translating 70S ribosome in the unrotated state (P and E, tRNAs); 23S rRNA 8b0x b 119 1.55 RF00001 URS000080E133_37762 36841832 0003735 0005840 37762 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggca <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>> ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))) Translating 70S ribosome in the unrotated state (P and E, tRNAs); 5S rRNA 8b2l h1 1626 2.2 RF01960,RF02542,RF01959,RF00177 URS000268141E_4097 37156858 0003735 0005840 4097 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcauguguaaguaugaacaaauucagacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguaucuacuacunggauaaccguaguaauucuagngcuaauacgugcaacaaaccccgacuucuggaagggaugcauuuauuagauaugcnaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguggugacgggugacggagaaunaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccaauccugacacggggaggunguganaauaaauaacaauaccggcugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcggnaauuccagcuccaauancguanauuuaaguugnugcaguunaaaagcucguaguuggacuuugggaugucccguuacuuugaagaaauuagagugcucaaagcaagccuacgcucuguauacauungcaugggauaacauuauaggauuucgguccuauuucgggaucggaguaaugauuaacagggacagucgggggcauncguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggcaccuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacggggaaacuuaccagguncagacauaguaagganugacagacugagagcucuuucuugauucuauggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccguuaacgancgagaccucagccugcuaacuagcuaugcggagguaucccuucgcggccagcuncuuagagggacuacggccuuuuaggccgcggaaguuugaggcaauaacangucugugaugcccnuagauguucugggccgcacgcgcgcuacacugauguauucaacgaguuuauagccuuggccgacaggcccggguaaucuuugaaauuucaucgugauggggauagaucauugcaauuguuggucuucaacgnggaauuccuaguaagcgcgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgnccgucgcuccuaccgauugaaugauccggugaaauguucggaucgcgcgagaaguccauugaaccuuaucauuuagagganggagaagucguancaagguuucnguaggugnnccugcggaaggaucauug ...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<...........>>...>>.>>......<<........<<<..<<..<<....<<<<<............<<.....<..<<<.....>>>..>......>>........<.<<<..<<...>>..>>>.>..<.<<<<<<................>>>>>>.>.......<<<<.<<<<.>>>>>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<..>>>>>.>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<<.....<<<..>>>.<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>........<<<<<<<<<<<.....>>>>>>>>>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.<..>>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<<....>>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>.......>>>>>....>.>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>.......>.>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<>>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))...(..(((((...(.(....(.....(((.(((..((....((....((...........))...))[))......(((.......(.(...(..((....(((((........[...((.....(..(((.....)))..)......))..........(((..(.....)..)))..(((.((.(((.......(......).))).)).).).).(]((((..(((.))).))))).)))))...)))...).).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(..(....)..)...)))))).).....(.(((....(((.]...)))..))))......).).....((((((((()))))).)))....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))).).....[......(.([[...(.(.((...(.(..(....((((..))))(((.((.((........(..((.......)).(((....))).....).......)).))...)))........(((((.((.((.....)).)).))))).....)....(((..((.((...(((...(((.(((((((....((........)).......))))))).))).......((....))....)))..)).))...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{....((.((.(((..((((((((.(((.(..))))))))))))..)))...((..]]))...))...].)).)).).(((......((((....))))....)))...]]].]((((..(((((((..((..(((((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..((((......))..(.((......)))...))..))....(((((.((..((((..((((.((((((((....))))))))...))))..)))).))..(..(((((.....))))).....)..)))))....))).))).....).))))).....).)))))...)).)))..))).(...((((.(.......((.......(((.((((....)))).)))....)).......).))))......(....(((((............)))))....)..)..)))))......(((((((.......))))))).......))...))))))).)).))..(.(..((.(.(((((.((..(.(((((((..(((..((((..(...(((())))...)..))))..)))..))))))))..)).)))))..).))...)..)..(((((((((....)))))))))}........ Cryo-EM structure of the plant 80S ribosome; 18S rRNA 8b2l A3 3196 2.2 RF02543 URS0002681419_4097 37156858 0003735 0005840 4097 gcgaccccaggucaggcgggacuacccgcugaguuuaagnauancaanaagcggaggaaaagaaacuuacaaggauuccccuaguaacggcgagcgaaccgggaacagcccagccuuagaaucgggcggcuccgccguucgaanuguagucuggagaagcguccucagcggcggaccgggcccaaguccccuggaagggggcgccagagagggugagagccccguugugcccggacccugucgcaccacgaggcgcugucuacgagucggguuguuugggaaugcagcccaaaucnggcggugaauuccguccaaggcuaaauacgggcgagagaccgauagcgaacaaguaccgcgagggaaagaugnaaaggacuuugaaaagagagucaaagaguncuugaaauugucgggagggaagcggaugggggccggcgaugcgccccggucggauguggaacggugacgagccgguccgccgaucgacucggggcguggaccagcguggauugggggggcggccaaagcccgggcuuucgauacgcccguggaacgccgucuccuugauugugguaggcagcgcgcgccuccggcgugcuucggcaucugcgcgcuccggacgcuggccugugggcuccccauucgacccgucuugnaacncggaccaaggagunngacaugugugcgagucaacgggcgaguaaacccguaaggcguaaggaagcugauuggugggaucccccugaggggugcaccgccgaccgaccuugaucuucugugaaggguncgagugugagcauaccngucgggacccnanagauggugancuaugccugagcggggcgaagccagaggaaacucugguggaggcccgcagcgauacugncgugcaaaucguucgucugacuuggguauagnggcgaaagacuaaucgaaccgucuagungcugguucccuccgaaguuucccucaggauagcuggagcucgcgugcgaguucuaucggguaaagccaaugauuagaggcaucgggggcgcaacgcccucgaccuauucucaaacuuuaaanagguaggacggugcggcugcuuuguugagccgcaccacggaaucaagagcuccaagugggccauuuuugguaagcngaacuggcgaugcgggaugaaccggaagccggguuacggugccaaacugcgcgcuaaccuagaucccacaaaggguguuggucgauuaagacagcgccgaaucaacuagccccgaaaauggauggcgcuuaagcgcgcgaccuacacccggccgucggggcaagugccaggccccgaugnguaggagggcgcggcggucgcugcaaaaccuugggcgcgagccugggcggagcggccgucggugcagaunuuggugguagunncaaauauucaaaugagaanuuugaaggccgaagaggggaaagguuccaugugaacggcacuugcacauggguuagncgauccuaagggucgggggaaccccgacagauagcgcguuucgcgcguacuccgaaagggaaucggguuaaaauuccugaaccgggacguggcgguugacggcaacguuaggaaguccggagacgucggcgggggccucgggaagaguuaucuuuucuguuuaacagccugcccacccuggaaacgacucagucggagguaggguccagcggcuggaagagcaccgcacgucgcgugguguccggugcgcccccggcggcccuugaaaauccggaggaccgagugccguccacgcccggucguacucauaancgnaucangucuncaaggugaacagccucuggucgauggaacaanguaggcaagggaagucggcaaaauggauccguaacuucgggaaaaggauuggcucugagggcugggaacagccaacucagaacugguacggacaagnngnauccgacuguuuaauuaaaacaaagcauugcgauggucccugcggauguuuacgcaaugugauuucugccnagugcucugaaugucaaagugangaaauucaaccaagcncggguaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaunuaauuagugacgcgcaugaauggauuancgagnuucccacugunccugucuacnauccagcgaaaccacagncaagggaacgggcuuggcagaaucancggngaaagaagacccunnugagcuugacncuaguccgacuuugugaaaugacuugagaggguaguauaagugggagccggcgaaagugaaauaccacuacuuuuaacguuauuuuacuuauuccgugaaucggaagcggggcacugccccucuuuuuggacccaaggcuugcuugcaggccgauccgggcggaagacauugucagguggggaguuuggcugnggcggcacaucuguuaaaagnuaacgcaggnnuccuaagaugagcucaacgagaacagaaaunucguguggaacagaaggguaaaagcucguuugauncugauuuccagnacgaanacgaaccgugaaagcguggccuaacgauccuuuagaccuucggaauucgaagcuanangugucagnaaaguuaccacagngauaacuggcuuguggcagcnaagcguucauagcgacguugcuuuuugauccuungaugucggnucunccuaucauugugaagcagaauucaccanguguungaunnuucacccaccaauagggaacgugngnugggnuuagancgucgugagacagguuaguuuuacccuacugaugacagugucgcaauaguaauucaaccuaguacgagaggaaccguugauucgcacaauuggucaucgcgcuugguugaaaagccaguggcgcgaagcuaccgugcgcuggauuaugacugaacgccucuaagucagaauccgggcuagaagcgacgcaugcgcccgccguccgcuugccgacccgcaguaggggccuuuggcccccaagggcacgugucguuggcuaagucaucguggcggaagagccgcgguggccgccuugaaguacaauuuccaucgagcggcggguagaanccuuugcagacgacnuaaauacgcgacgggguauuguaaguggcagaguggccuugcugccacgauccacugagauucagcccuuugucgcuccgauucgu ........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<.......<.....>......>>>>>..[[[....<......<<<<<<<<<...>>>>>>>>>......>.....<<<<<<<<.<<<.<<<<<<<.<<<<<<.<<...<<<<......>>>>.((......<<<.....))>>>..>>.>>>>>>...>>>>>>>.....>>>>>>>>.>>>.......<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<<<<<......<<<<<<<<<<<<...<<<<<.<<<<.....>>>>.>>>>>....>>>>.>>>>>>>>.<.<<<<<<..<<<<<<<<<<<<<<<.....<<<<<<<.........>>>>>.>>...>>>>>>>>>>>>>>>.........<<<<<<<<<<...>>>..<<....>>....>>>>>>>.....>>>>>>.>....>>>.>>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<........>>>....>>>...<<....>>....<<<<<...<<<<....>>>>....>>>>>.<<<<<<<.....<....>.....>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<......<<.<<<<<<<.....<<<....<<<....<<<....<<<<<<.....>>>>>>..>>>....>>>..>.>>.....>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.....<<<<<<.......<..........<<<.<<<<<<.<<<.......<..>...>>>.>>>>>>>>>..........))).>....>>>>>>.>>>...>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<<<.......<<<.<<<<....>>>>>>>....>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<...>>>>>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<<...<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<.<<<<.......>>>>.><...<<<<<.....<<<<<<....<<<<...>>>>....>>>>>>.....>>>>>....><<<<<<<.......>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>>.>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<.<..<<<.....<<<<....>>>>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<.<<<...<<<<<<<<<<.<<<<<<.........<<<<.<.<<<>>>............>>>>>.>>>>>>..>>>>>>>>>>...<<<<<.....<<<<...<<<<<...>>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>......>>>.>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<.<<<<<......>>>>>...>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<..<<<<.<.<<<<<.................>>>>>.><<<<<...<<<<....<<<<<<<<<......>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>...>>>>>>>....<<<<<<<<<.<<.<......<<.......<<<<<<...>>>>>>....>>...........<<<...<<<<<<<<<<<......>>>>>>>>>>>.>>>................>.>>.>>>>>>>>>.<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<.<..<<<<<......>>>>>..>>>>>...>>>....>>>>..>>>>>...>>>>>.. ........................(((((......(...[.{).......)))).).........((....))...((((.......(.].}.)......))))...((((.........((((((((((...)))))))))....)........(((((((.(((.(((((((.((((((.(..({((((......)))))[[(...).(((....}]])))...).))))))...))))))).....)))))))).))...)....(((((((........))))))).....((.((..[[[[[[)).))..)))..................................((....))............(..((((....))))............).....................((.(((((((((..(...((((((((((((...(((((.(((.......))).)))))....)))).)))))))).(.(((((((.((.((((((((((((.....(((((((.........))))).))...)))))))))))).)).........((((((((((...)))(.((....))..).)))))))....))))))).)...)))).)))))).)).[((((........))))((((((....((((((.(((.((..(((...(((........)))....)))...((....))....(((((...((((....))))....))))).(((((((.....(....).....)).))).))....)).))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))....((..((.(..........))).))...).))))))))).(.((.......))...)..))))))......).))..((((((....(..((....))..)((((((((((......((.(((((.(......((.....(...(.(((....((((((.....))))))..))).)...)...)).......).)))...(((((((((.(......))))))))))....))))..)))))))).))..((((....((.....))....))))....(((......)))...(((((((...((([[[...(.((((((.......(..........(((.((((((.(((.....{........))).)))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((((.......(((.((((....)))))))....))))))))))..).....))))))((.....((.....((((.(.......).))))((((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(((.(((((....)))..).)...(((((...)))))...).))....))...(((((........)))))]]((((.((((((((..((((....)))...(..<((((((...((((.(((((((((((((.(((....{{...))).)(...((((((....(((((.....(((.....))).....)))))...).)))))....)(((((((.......))))))))))).).))))))).))))(...)....))))))...)).....)))).)))))))).))).))).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.{..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.].(...........)...(((((((....((((....))))......))))))).}.(.(.(((..((((((.(...(......((((....))))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).)))))))..))))))....)).{..(((((.....]}.)))))....(((((..(((.((......((((.(((((...(((((.(((.(((...((((((((((...((((.........(((....((()))..............))).))))....))))))))))...(((((.....((((.(.((((.....)))).).........>...((((((....))))))..))))..)))))......))).)))..)))))..(((......[)).)..((((..........]))))..([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(.(((..((((....{..))))..))))((......)).))]]].......((((((..((((.]]]]]]))))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(((.(.(((......))).)...))).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).)))))....(((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))...)))))))....(((((((((.((.(....(.((.......((((((...))))))....)))..........(((...(((((((((((......))))))))))).)))................).)).))))))))).(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..)..)))))..)))))...)))....))))..))))))..))))).. Cryo-EM structure of the plant 80S ribosome; 25S rRNA 8b2l B3 163 2.2 RF00002 URS000268141B_4097 37156858 0003735 0005840 4097 aaacgacucucggcaacggauaucucggcucucgcaucgaugaagnacguagcgaaaugcgauacuuggugugaauuncagaauuccgugaaccaucgagucuuugaacgcaaguugcgcccgaagccauuaggccgagggcacgucugccugggcgucacgc ............................................<<<<<<.((.....>>>.....<<<<<<.....))............>.>>>>.>...>>>....<<.....>><<<<...<<......>>...>>>>..................... ............................................((((((.[[.....))).....((.(((.....]]............).)).).)...)))....((.....))((((...(.(.....))...))))..................... Cryo-EM structure of the plant 80S ribosome; 5.8S rRNA 8bn3 3 121 2.4 RF00001 URS000055688D_4932 38324474 0003735 0005840 4932 gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacuguaguuaagcugguaagagccugaccgaguaguguagugggugaccauacgcgaaacucaggugcugcaaucu <<<<<<<<<....<<<<<<<<.....<<.<<..............>>....>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>.....>>>>>>>>>>>>>>>. (((((((((....((((((((.....((((((...(....)...))).)..))....)))))).))((((((.......(((((..((....)).))))).....))))))))))))))). Yeast 80S, ES7s delta, eIF5A, Stm1 containing; 5S ribosomal RNA 8bn3 4 158 2.4 RF00002 URS00001BF64E_4932 38324474 0003735 0005840 4932 aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagcgaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucuuugaacgcacauugcgccccuugguauuccagggggcaugccuguuugagcgucauuu .........................................<<<<<<.<<.....>>>.....(.<<<......>>..............>>>..)...>>>....<<.....>><<<<<<<<<....>>>>>>>>>..................... .........................................((((((.[[.....))).....(.((((.....]]............).)))..)...)))....((.....))(((((((((....)))))))))..................... Yeast 80S, ES7s delta, eIF5A, Stm1 containing; 5.8S ribosomal RNA 8bn3 1 3143 2.4 RF02543 URS00029156E2_4932 38324474 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<<.......<<.<<<<<<...>>>>>>.>>.......>>....<<<<<<<.<<<<<<<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>>>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<..<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<...<<<<<<.....>>>>>>.>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.......<<.........>>............................>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<<........>>>>>>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..[[[..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<..>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<.<...<<.....<<<<....>>>>.....>>.>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<..<<<<<<<<<<.......>>>>>>>>>>...<<<<<.....<<<<..<<<<........>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>)))......<<<<<<<..<<<<.))))))>>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>....<<<<<<<<..<<<<...<<<<<<...............>>>>>>..<<<<<...<<<<....<<<<<<<<<<]]].>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<.<..<<<<<......>>>>>..>>>>>...>>>....>>>>.>>>>>..>>>>>.. 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Yeast 80S, ES7s delta, eIF5A, Stm1 containing; 25S ribosomal RNA 8bn3 2 1737 2.4 RF01960,RF02542,RF01959,RF00177 URS000291567B_4932 38324474 0003735 0005840 4932 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Yeast 80S, ES7s delta, eIF5A, Stm1 containing; 18S ribosomal RNA 8buu A 2852 2.9 RF02541 URS00026813E0_224308 36951104 0003735 0005840 224308 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<..[..((.>>>.....<<<<<<<..<<<))..]..>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...(((....<<<<<<<<....>>>>>>>>......<<<<<<<<<.....<<<<.......<<<<<<<<<<.<<<.....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>.>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<...<<.<<..>>..>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<..>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<..>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<.<<<<<<......<<...<<<<....<<<<..<<<..<<<.<<<<<<<<...(((....>>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>....>>>>..>>>>>...>><..<<..>>...>>>>>>...>>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<....<<<<....>>>>...>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>..<<<<.<<<..<<<<<<<..<<<...<<...<<<<<..<<....>>...>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>...>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. ((((((......((((((((((.....(((..(((((((((((((......((((((..[..[[[)))...].((((((...(((]]..]..)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...((((...((((((((....))))))))....{.(((((((((.....((((.......((((((((((.(((...(.((((......)))))[[(...).(((.....]])))...)))...)))))))))))))).)))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((.(((((..(((...(((.....)))...)))...((....))..((((.....))))......))))).)))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((..((((((((((.....(((...((((((((...((..(..)...))...))))))))..)).).....)))).))))).)))))))).))..(((((((.((......)).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.((..))...)))))))))).))...........]]].)...))))))))))...)))))))((((((()))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((.((((((......((...((((....((((..(((..(((.(((((((((...{{..).))))))((..(((((..(((((((((((.((.....)))))))))....))))..)))))...))(..((..))...))))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((....((((....))))...)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.((((((((((((.(......[..(((((..(((......((((.(((....))).))))...)))..........].)))))).)))))))))))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).).....(((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).))....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((....))))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...))))))). ARE-ABCF VmlR2 bound to a 70S ribosome; 23S rRNA 8buu a 1538 2.9 RF01959,RF00177,RF02542,RF01960 URS00001B4049_224308 36951104 0003735 0005840 224308 ggagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauacaugcaagucgagcggacagaugggagcuugcucccugauguuagcggcggacgggugaguaacacguggguaaccugccuguaagacugggauaacuccgggaaaccggggcuaauaccggaugguuguuugaaccgcaugguucaaacauaaaagguggcuucggcuaccacuuacagauggacccgcggcgcauuagcuaguuggugagguaacggcucaccaaggcgacgaugcguagccgaccugagagggugaucggccacacugggacugagacacggcccagacuccuacgggaggcagcaguagggaaucuuccgcaauggacgaaagucugacggagcaacgccgcgugagugaugaagguuuucggaucguaaagcucuguuguuagggaagaacaaguaccguucgaauagggcgguaccuugacgguaccuaaccagaaagccacggcuaacuacgugccagcagccgcgguaauacguagguggcaagcguuguccggaauuauugggcguaaagggcucgcaggcgguuucuuaagucugaugugaaagcccccggcucaaccggggagggucauuggaaacuggggaacuugagugcagaagaggagaguggaauuccacguguagcggugaaaugcguagagauguggaggaacaccaguggcgaaggcgacucucuggucuguaacugacgcugaggagcgaaagcguggggagcgaacaggauuagauacccugguaguccacgccguaaacgaugagugcuaaguguuaggggguuuccgccccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacggucgcaagacugaaacucaaaggaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacauccucugacaauccuagagauaggacgucccggggcagagugacagguggugcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuugaucuuaguugccagcauucaguugggcacucuaaggugacugccggugacaaaccggaggaagguggggaugacgucaaaucaucaugccccuuaugaccugggcuacacacgugcuacaauggacagaacaaagggcagcgaaaccgcgagguuaagccaaucccacaaaucuguucucaguucggaucgcagucugcaacucgacugcgugaagcuggaaucgcuaguaaucgcggaucagcaugccgcggugaauacguucccgggccuuguacacaccgcccgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuuaggagccagccgccgaaggugggacagaugauuggggugaagucguaacaagguagccguaucggaaggugcggcuggaucaccuccu ...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<<<...<<<..<..>..>>>...>>>>.>>>>>......<<........<<<<<<<..<<...<<<<<<<.<<<<.....<<<<<<....>>>>>>......>>>>.....<<<<<<<<<<....>>>>>>>>>>.....<<<<<<....>>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<.........<<<<<<<<<.....>>>>>>>>>..........>>>>>>...>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<......>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<....<<<<<....>>>>>...<<<.>>>>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<..<<<<....<.<<<<..<<<..<<<...>>>.>>>.>>>>.>...>>>>..>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ ...((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((((.(.(.((......)).))..)))).)))))......(((.......(((((((..((...(((((((.((((.....((((((....))))))......)))).....((((((((((....)))))))))).....((((((....)))))).)))))))..))))))))).(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))....((((((...(.....(.(((((((.....))))))).).....)....))))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))...).)))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))))).)))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((......))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((.....((((....))))....((().))))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((..(((..((......)))))...)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((..((((....(.((((..(((..(((...))).))).)))).)...))))..))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... ARE-ABCF VmlR2 bound to a 70S ribosome; 16S rRNA 8c6j 6 97 2.8 RF00026 URS000035C796_9606 36867703 0030621 0000244,0000353 0005688,0046540 9606 gugcucgcuucggcagcacauauacuaaaauuggaacgauacagagaagauuagcauggccccugcgcaaggaugacacgcaaauucgugaagcguu <<<<<.<<....>>>>>>>.....................................<<...<<<.....>>>....>>................... ((((..((....)).)))).....................................((..((((.....)))..).))................... Human spliceosomal PM5 C* complex; U6 snRNA 8ca7 A 502 2.06 RF00177,RF01959,RF01960,RF02542 URS0000D56C37_679895 37550453 0003735 0005840 679895 ugaucauccauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugaaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgncaagggauca .<........><<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>................ .(........)(((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....))))))).............))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(.)..)...... Omadacycline and spectinomycin bound to the 30S ribosomal subunit head; 16S rRNA 8cai A 1114 2.08 RF00177,RF01959,RF02542,RF01960 URS0000D56C37_679895 37550453 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacagguugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagcuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguuguuggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccggcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcgacgucaagugncuucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<....>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<.>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<.......<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.........>>.........>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((.).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((())).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((.))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((......(((.(....(((((((((....)))...(((......)))...)))))).....).).))........)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Streptomycin and Hygromycin B bound to the 30S body; 16S rRNA 8cam a 2690 1.86 RF02541 URS00004B0F34_679895 37550453 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcguaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaaucagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaacc <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<.<....<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>..>>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<.....>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<....>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>..>....>>>>>>>>>..>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<..>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>.(<<...<<<<<<<...........<<)..(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>> ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((.....))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((....)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(..)...)))..))))).))...........]]].)...))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((..))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.......).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))) Evernimicin bound to the 50S subunit; 23S rRNA 8caz A 460 2.11 RF00177,RF01959,RF01960,RF02542 URS0000D56C37_679895 37550453 0003735 0005840 679895 cccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggcc <<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<.....>...>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>.. ((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....))))))).............))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))).. empty 30S head; 16S rRNA 8ccs AA 3190 1.97 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 uugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagaggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugnaacnnggaccaaggagunuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaugucuucggauggauuugaguaagagcauagcuguugggacccnanagauggugancuaugccugaauagggugaagccagaggaaacucugguggaggcucguancgguucugncgugcaaaucgaucgucgaaunuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugagguaaagcgaaugauuagagguuccggggucgaaaugaccuugaccuauucucaaacuuuaaauauguaagaaguccuuguuacuuaauugaacguggacauuugaaugaagagcuuuuagugggccauuuuugguaagcngaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaunuuggugguagunncaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugauaaccgcagcaggucuccaaggugaacagccucuaguugauagaauaanguagauaagggaagucggcaaaauagauccguaacuucgggauaaggauuggcucuaagggucgcgaucaacuuagaacugguacggacaaggggaaucugacugucuaauunaaacauagcauugcgauggucagaaagugauguugacgcaaugugauuucugccnagugcucugaaugucaaagugangaaauucaaccaagcgcggguaaacggcgggaguancuaugacucucuuaagguagcnannugccucnucaucuaauuagugacgcgcaugaauggauuaacgagauucccacugunccuaucuacnaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaaagaagacccuguugagcungacncuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuuauucaaugaagcggagcuggaauuccacguucuagcauucaaggucccauucggggcugauccggguugaagacauugucagguggggaguuuggcugnggcggcacaucugunaaacgnuaacgcagauguccuaaggggggcucauggagaacagaaaucuccaguagaacaaaaggguaaaagcccccuugauuuugauunucagngugaauacaaaccaugaaaguguggccuaucgauccuuuagucccucggaauuugaggcuanangugccagaaaaguuaccacagngauaacuggcuuguggcagucaagcguucauagcgacauugcuuuuugauucuungaugucggcucuuccuaucauaccgaagcagaauucgguaagcguuggaunnuucacccacuaauagggaacgugngnuggguuuagancgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccuugguuacgaucugcugagauuaagccuuuguugucugauuugu ........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...<.......<<.<<<<<<...>>>>>>.>>.......>.....<<<<<<.<<<<<<.<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>.>>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<<..>>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<...<<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<<...>>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<.<............>.>>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<...............<<<<<...............>>>>><<.<<<<<<<<<<<>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<.<...<<<..........................................>>>..>..>>>>>>>>>>...<<<<<.....<<<<..<<<<..>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<<...............>>>>>>..<<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((.(((((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))).))....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......((((.(....).)))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((....((((((.((((((..(((..((((.......))))..)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((....(((.........)).).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.................)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((()))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.....((.....((((....)))).....))..))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((.(((..(.(((................(......)..................))).).).)).)))))))....((((.....((((..((((()))))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..(((.((..)).)))..)))))...)))....)))).)))))).))))).. 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex; 25S ribosomal RNA 8ccs c 1604 1.97 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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...<<<<<.[.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<......>>...>>.>>......<<........<<<..<<..<<....<<<............<<......<<.<<.......>>.>>......>>........<<<<.>>>><...<<<<<<.............>>>>>>.....>...<<<<..<<<.....>>>.>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<..>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>.........<<<((.....<.<<...<<<.<<....<<<<<<.<<<..>>>.>>>>>>.....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<<.....>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<<.....>.>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>>>.<<<......<<<......>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<..<........<<.<<<........>>>.>>......>..>>...<<.<<<..<<<<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<<.<.<<<<....>>>>.>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>...>.>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<..>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<....>>>>>>>>>........ ...((((..[.[[[..))))((((.((((((...(.(...((.....(((.(((..((....((....((......))...))[))......(((.......(((..((..((....(((........(...((......((.(((.....))).))......)).........(((.))).(.(.((((((....(......).)))))).)...)..)((((..(((.....))).))))....)))...))))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)....).).....((((((()))).)))....(.(((.(...........)).))......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..[......((([[...(.(.((...(((.((....(.((((.(((()))).)))).).....(((((.((.......((..((.......)).(((.....)))....))......)).))..))).........((...()..)).....))...(((..((.((...((((..((..((((((.....((........))........))))))..)).......((....))...))))..)).))...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..((((((((.(((........)))))))))))..)))...((..]]))...))...].))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))..........(((((.(....(...(........((.(((........))).)).......)..)...((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..((((......((....))........))))..)))).))..(.((((((.....))))))....)..)))))....))).))).....).))))).....).)))))...)).)))).))).(...(((((((......((.....((..((((....))))..))....)).......)))))))......(....((((((..........))))))....)..)..))))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.(((..(.((..(...(((())))...)..)).)..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}....... 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex; 18S ribosomal RNA 8cdl AA 3190 2.72 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex; 25S ribosomal RNA 8cdl Dd 14 2.72 38030725 4932 aagaaaauguuuuu .............. .............. 80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex; Messenger RNA 8cdl c 1604 2.72 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex; 18S ribosomal RNA 8cdr AA 3197 2.04 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 25S ribosomal RNA 8cdr CC 158 2.04 RF00002 URS00001BF64E_4932 38030725 0003735 0005840 4932 aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagcgaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucuuugaacgcacauugcgccccuugguauuccagggggcaugccuguuugagcgucauuu .........................................<<<<<<.<<.....>>>.....(.<<<......>>..............>>>..)...>>>....<<.....>><<<<<<<<<....>>>>>>>>>..................... .........................................((((((.[[.....))).....(.((((.....]]............).)))..)...)))....((.....))(((((((((....)))))))))..................... Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 5.8S ribosomal RNA 8cdr c 1608 2.04 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 18S ribosomal RNA 8ceh AA 3197 2.05 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...<.......<<.<<<<<<...>>>>>>.>>.......>.....<<<<<<.<<<<<.<.<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>..>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<...<<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<.....>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>...........<............>.......>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<.>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<<<.<.<<<..........................................>>>.>>>.>>>>>>>>>>...<<<<<.....<<<<..<<.<<......>>.>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<<...............>>>>>>..<<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((.((.((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))..))....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......((((.((..)).)))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((....((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((....(((.(.....).)).).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.................)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((.)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..((((((((((((.(.(((................(......)..................))).))).))))))))))....((((.....((((..((............))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..))))))..)))))...)))....)))).)))))).))))).. Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 25S ribosomal RNA 8ceh c 1608 2.05 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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...<<<<<.[.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<......>>...>>.>>......<<........<<<..<<..<<....<<<............<<......<<.<<.......>>.>>......>>.........<<<.>>>.<...<<<<<<.............>>>>>>.....>...<<<<.<<<<.....>>>>>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<..>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>.........<<<((.....<.<<...<<<.<<....<<<<<<.<<<..>>>.>>>>>>.....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<.......>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<<.....>.>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......<<........>>..........<<<<<......<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<<.<..<<<....>>>..>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>.....>>>>>>>.......>>>>>...>>.>>>>.>>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<<<..>>>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ 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Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 18S ribosomal RNA 8cep A 1046 2.04 RF00177,RF01959,RF02542,RF01960 URS000268143B_679895 37550453 0003735 0005840 679895 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaaugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaagcccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacggggguuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<.....>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.....<<<<.....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.....>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((..).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((.....((((.....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(..)))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Kasugamycin bound to the 30S body; 16S rRNA 8ceu a 2753 1.83 RF02541 URS00004B0F34_679895 37550453 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<..<<....>>...>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((.(.((.....)).)..))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Retapamulin and Capreomycin bound to the 50S subunit; 23S rRNA 8cf1 A 485 1.82 RF00177,RF01959,RF01960,RF02542 URS000268143B_679895 37550453 0003735 0005840 679895 auugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnc ..<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....... ..(((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))....... Tetracycline bound to the 30S head; 16S rRNA 8cf5 AA 3190 2.71 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>...{.....<<....>>..<<<<<......<<.....>>.....>>>>>..[[[..<<.......<<.<<<<<<...>>>>>>.>>.......>>....<<<<<<.<<<<<..<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>......>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]....}.............................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<.....>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<..<...........>.>>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<.<.<.<<<..........................................>>>.>>..>>>>>>>>>>...<<<<<.....<<<<..<<<<..>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((.(((((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))).))....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.(((((....(((((((((((((((((((((((.......(((((((......((((.(....).)))).......))))))).....))))).))))))))))........(((....)))....)))))))).....))))).))))).<((((........))))((((((....((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((...(((.(((((((.....(((....(((..(.((((...(.((.(.....).)).).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))).)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.................)....))....))...(((((........)))))]]((((..(((.(((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....)))...))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((()))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.....((.....((((....)))).....))..))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..((((((((((.....(((..........................................))).....))))))))))....((((.....((((..((((()))))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..(((.((..)).)))..)))))...)))....)))).)))))).))))).. Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 25S ribosomal RNA 8cf5 BB 121 2.71 RF00001 URS000055688D_4932 38030725 0003735 0005840 4932 gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacuguaguuaagcugguaagagccugaccgaguaguguagugggugaccauacgcgaaacucaggugcugcaaucu <<<<<<<<<....<<<<<<<<.....<<.<<..............>>....>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>.....>>>>>>>>>>>>>>>. (((((((((....((((((((.....((((((...(....)...))).)..))....)))))).))((((((.......(((((..((....)).))))).....))))))))))))))). Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 5S ribosomal RNA 8cf5 c 1604 2.71 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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...<<<<<.[.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<......>>...>>.>>......<<........<<<..<<..<<....<<<............<<......<<.<<.......>>.>>......>>........<<<<.>>>><...<<<<<<.............>>>>>>.....>...<<<<..<<<.....>>>.>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<..>>>.>>>......<<.................>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>.........<<<((.....<.<<...<<<.<<....<<<<<<.<<<..>>>.>>>>>>.....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<<.....>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<........>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<<<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<<...<<<<....>>>>.....>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>...>.>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<..>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ ...((((..[.[[[..))))((((.((((((...(.(...((.....(((.(((..((....((.....(......)....))[))......(((.......(((..((..((....(((........(...((......((.(((.....))).))......)).........(((.))).(.(.((((((....(......).)))))).)...)..)((((..(((.....))).))))....)))...))))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)....).).....((((((()))).)))....(.(((.(...........)).))......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..[......((([[...(.(.((...(((.((....(.((((.(((()))).)))).).....(((((.((.......((..((.......)).(((.....)))....))......)).))..))).........((...()..)).....))...(((..((.((...((((..((..((((((.....((........))........))))))..)).......((....))...))))..)).))...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..((((((((.(((........)))))))))))..)))...((..]]))...))...].))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))..........(((((.(....(............((.(((........))).))..........)...((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..(((((.....((....)).......)))))..)))).))..(.((((((.....))))))....)..)))))....))).))).....).))))).....).)))))...)).)))).))).(...(((((((......((.....((..((((....))))..))....)).......)))))))......(....((((((..........))))))....)..)..))))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(.(((((.((.(((..(.((..(...((.().))...)..)).)..))).)).))))))..)).))))...).))...)..)..(((((((((....)))))))))}....... Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 18S ribosomal RNA 8cf8 A 460 2.2 RF00177,RF01959,RF01960,RF02542 URS000268143B_679895 37550453 0003735 0005840 679895 cccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggcc <<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<..<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>.........>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>.. ((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))).. Eravacycline bound to the 30S head; 16S rRNA 8cg8 AA 3197 2.57 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<........<<.<<<<<<...>>>>>>.>>........>....<<<<<<.<<<<<<..<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>..>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<.....>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.........<.<<...........>>.>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>...<.{{<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..[[[..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>......>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<.>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<..<<<<<<<<<<<<.<.<<<..........................................>>>.>>>.>>>>>>>>>>...<<<<<.....<<<<..<<<<<......>>>>>..........}}...<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>)))......<<<<<<<..<<<<.))))))>>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<<<<<<<<]]].>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((.((((((.((((((((...({((((......)))))[[(...).(((....}]])))....))))))))...)))).))....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......(((((((..))))))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((....((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((...((((((.....)))))).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.(.............).)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((.)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..((.(((((((((.(.(((................(......)..................))).))).))))))).))...(((((.....((((..((............))..........]]...((((((....))))))..))))..))))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((....((((.(..(((......)))..).))))..)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..))))))..)))))...)))....)))).)))))).))))).. Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 25S ribosomal RNA 8cg8 CC 158 2.57 RF00002 URS00001BF64E_4932 38030725 0003735 0005840 4932 aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagcgaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucuuugaacgcacauugcgccccuugguauuccagggggcaugccuguuugagcgucauuu .........................................<<<<<<.<<.....>>>.....(.<<<......>>..............>>>..)...>>>....<<.....>><<<<<<<<<....>>>>>>>>>..................... .........................................((((((.[[.....))).....(.((((.....]]............).)))..)...)))....((.....))(((((((((....)))))))))..................... Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 5.8S ribosomal RNA 8cg8 c 1608 2.57 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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...<<<<<.[.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<......>>...>>.>>......<<........<<<..<<..<<....<<<............<<......<<.<<<.....>>>.>>......>>........<<<<.>>>><...<<<<<<.............>>>>>>.....>...<<<<.<<<<.....>>>>>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<..>>>.>>>......<<.................>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<.<<...<<<.<<....<<<<<<.<<<..>>>.>>>>>>.....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<.......>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<<.....>.>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<.<<<<.<<<<<.......<<........>>..........<<<<<.<....<............<<.<<<........>>>.>>..........>.<.<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<<.<.<<<<....>>>>.>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>.....>>>>>>>>....>.>>>>>....>.>>>>.>>>.>...<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<<<..>>>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ ...((((..[.[[[..))))((((.((((((...(.(...((.....(((.(((..((....((....((......))...))[))......(((.......(((..((..((....(((........(...((......((..((.....))..))......)).........(((.))).(.(.((((((....(......).)))))).)...)..)((((..(((.....))).))))....)))...))))..))).(((....((.....((((((((.......)))))))).))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)....).).....(((.((()))..)))....(.(.(..(..........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..[......((([[...(.(.((...(((.((....(.((((.(((()))).)))).).....(((((.((.......((..((.......)).(((.....)))....))......)).))..))).........((...()..)).....))...(((..((.((...((((..((..((((((.(...((........))......).))))))..)).......((....))...))))..)).))...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..((((((((.(((........)))))))))))..)))...((..]]))...))...].))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))........(.(((((.(........(........((.(((........))).)).......)......((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..((((......((....))........))))..)))).))..(.((((((.....))))))....)..)))))....))).))).....).))))).....).))))))..)).)))).))).(...(((((((......((.....((..((((....))))..))....)).......)))))))......(....((((((..........))))))....)..)..))))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.(((..(.((..(...((.((())).))...)..)).)..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}....... Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 18S ribosomal RNA 8cgd a 2748 1.98 RF02541 URS00004B0F34_679895 37550453 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaacc <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<<..>>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<..<<....>>...>>>>>..>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<..>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>> ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..(((((((..)))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((.(.....).))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(..)...)))..))))).))...........]]].)...))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((..))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))) Clindamycin bound to the 50S subunit; 23S rRNA 8cgi A 460 1.89 RF00177,RF01959,RF01960,RF02542 URS000268143B_679895 37550453 0003735 0005840 679895 cccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggcc <<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>.. ((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....))))))).............))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))).. Pentacycline TP038 bound to the 30S head; 16S rRNA 8cgj A 1130 1.79 RF00177,RF01959,RF02542,RF01960 URS000268143B_679895 37550453 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggcucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaagcccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcgcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcagucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacaugacgucaacccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<..<.......>.>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<..>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<........<<....>>.......>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<..>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.........<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.................>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((.(........).))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((())))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......(.((....)).).....))))..((.(((((...(..(.(((.((((.......)))).))).)...)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((()))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((..(.(....(((((((((....)))...(((......)))...))))))..........).)....)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Streptomycin bound to the 30S body; 16S rRNA 8cgk a 2699 1.64 RF02541 URS00004B0F34_679895 37550453 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaaaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaacc <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<<..>>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<.<....<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>..>>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<<..>>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<......>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<................>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<......>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>.>.....>>>>>>>>>..>>>>>...........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<....>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>.(<<...<<<<<<<...<<..>>.....<<)..(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>> ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((......)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{........)))..))))).))...........]]].)...))))))))))...)))))))(((((......)))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(.)........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((....)))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((()))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))) Lincomycin and Avilamycin bound to the 50S subunit; 23S rRNA 8cgn AA 3197 2.28 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..<<<...........<<.<<<<<<...>>>>>>.>>.............<<<<<<.<<<<<.<<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>>..>>>>>.>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<.....>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<...<...........>..>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..[[[..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<.>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<..<<<<<<<<<<<<<..<<<..........................................>>>.>>>.>>>>>>>>>>...<<<<<.....<<<<..<<.<........>.>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>)))......<<<<<<<..<<<<.))))))>>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<<<<<<<<]]].>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((..((((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))).).....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......(((((.(...)))))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((....((((((.((((((..(((..((((.......))))..)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((...((((.(.....).)))).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.................)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((.)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((.((...(..((................(......)..................))..)...)).)))))))....((((.....((((..((............))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..))))))..)))))...)))....)))).)))))).))))).. Non-rotated 80S S. cerevisiae ribosome with ligands; 25S ribosomal RNA 8cgn c 1624 2.28 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 uaucugguugauccugccaguagucaunugcuugucucaaagauuaagccaugcaugucuaaguauaagcaauacagugaaacugcgaauggcucnuuaaaucaguuaucguuuauuugauaguucccuacaugguauaacugugguaauucuagagcuaauacaugcuuaaaaucucagauguauuuauuagauaaugaugauucauaauaacuuuucgaaucgcauggccuugugcuggcgaugguucauucaaauuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguuucaacggguaacggggaauaaggguucgauuccggagagggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccaauccuaauucagggagguagugacaauaaauaacgauacauguaauuggaaugaguacaauguaaauaccuuaacgaggnacaauuggagggcaagucugnugccagcagccgcggnaauuccagcuccaauagcguauauuaaaguuguugcaguunaaaagcucguaguugaacuuugggcccgguugcaacggggccuuucuuuuacuuugaaaaaauuagaguguucaaagcaggcguauugcucgaauauauungcauggaauaauagaauaggacguuugguucuauaggaccaucguaaugauuaauagggacggucgggggcaucaguauucaauugucagaggugaaauucuuggauuuauugaagacuaacuacugcgaaagcauuugccaaggacguuuucauuaaucaagancgaaaguuaggggaucgaagaugaucagauacngucguagucuuaaccauaaacuaugccgacuagggaucgggugguguuuuuuuaaugacccacucggcaccuuacgagaaaucaaagucuuuggguucuggggggaguauggucgcaangcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacggggaaacucaccagguccagacacaauaaggauugacagauugagagcucuuucuugauuuuguggguggngnugcauggcnguucuuaguugguggagugauuugucugcuuaauugcgauaacgaacgagaccuuaaccuacuaaauaguggugcuagcauuugcugguuauccacuucuuagagggacuaucgguuucaagccgauggaaguuugaggcaauaacangucugugaugcccuuagacguucugggccgcacgcgcgcuacacugacggagccagcgagucuaaccuuggccgagaggucuugguaaucuugugaaacuccgucgugcuggggauagagcauuguaauuauugcucuucaacnagnaauuccuaguaagcgcaagucaucagcuugcguugauuacgucccugcccuuuguacacaccgnccgucgcuaguaccgauugaauggcuuagugaggccucaggaucugcuagcggagaauuuggacaaacuuggucauuuagaggaacuaaaagucguaacaagguuucnguaggugnnccugcggaaggaucauu ...<<<<<.[.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<......>>...>>.>>......<<........<<<..<<..<<....<<<............<<......<<.<<.......>>.>>......>>........<<<<.>>>><...<<<<<<...............>>>>>>.....>...<<<<..<<<.....>>>.>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<..>>>.>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>>>>>.........<<<((.....<.<<...<<<.<<....<<<<<<.<<<..>>>.>>>>>>.....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<<..<<<<<<<..>>>>>>>.>>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>......<<<....>>>..>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<<.....>.>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<<<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<<.<.<<<<....>>>>.>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>...>.>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<<<..>>>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ ...((((..[.[[[..))))((((.((((((...(.(...((.....(((.(((..((....((....((......))...))[))......(((.......(((..((..((....(((........(...((......((.(((.....))).))......))........((((.))))(.(.((((((......(......).)))))).)...)..)((((...((.....))..))))....)))...))))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)....).).....(.((((()))).).)....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..[......((([[...(.(.((...(((.((....(.((((.(((()))).)))).).....(((((.((.(.....((..((.......)).(((.....)))....))..)...)).))..))).........(((..(((((((()))))))).))).....))...(((..((.((...((((..(((.((((((.....((........))........)))))).))).......((....))...))))..)).))...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..((((((((.(((........)))))))))))..)))...((..]]))...))...].))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))..........(((((.(....((((.........((.(((........))).)).......))))...((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((((.((..((((..((((......((....))........))))..)))).))..(.((((((.....))))))....)..)))))....))).))).....).))))).....).)))))...)).)))).))).(...(((((((......((.....((..((((....))))..))....)).......)))))))......(....((((((..........))))))....)..)..))))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.(((..(.((..(...(((((())))))...)..)).)..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}....... Non-rotated 80S S. cerevisiae ribosome with ligands; 18S ribosomal RNA 8cgr A 1060 2.12 RF00177,RF01959,RF02542,RF01960 URS000268143B_679895 37550453 0003735 0005840 679895 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaagcccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacggggguuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<.<....>.>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.....<<<<.....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.<...>.>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.....>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<<..>>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((((........))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....(((((...))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((.....((((.....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((..)))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(..)))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Apramycin bound to the 30S body; 16S rRNA 8cgu A 1047 1.89 RF00177,RF01959,RF02542,RF01960 URS000268143B_679895 37550453 0003735 0005840 679895 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaauugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaagcccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacggggguuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<.>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.....<<<<.....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.....>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((.)).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((.....((((.....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(..)))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Gentamicin bound to the 30S body; 16S rRNA 8cgv a 2687 1.66 RF02541 URS00004B0F34_679895 37550453 0003735 0005840 679895 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<<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<...>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<....>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>..>....>>>>>>>>>..>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<.>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...(((...)))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((....)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{........)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(.)...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Tiamulin bound to the 50S subunit; 23S rRNA 8civ AA 3197 2.47 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...<.......<<.<<<<<<...>>>>>>.>>.......>.....<<<<<<.<<<<<..<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>......>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<....<<<<....<<<<<<...>>>>>>..>>>>....>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<......<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.........<................>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<<....<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>.....>>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<.>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<<<...<<<..........................................>>>..>>.>>>>>>>>>>...<<<<<.....<<<<..<<<<<......>>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<....>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((..(.((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))..).....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......((((..(...).)))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((..(.((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((...((((((.....)))))).)))).)..)))..)).).....)))))...((((.((((.(......))))).)))).....))))..)))))))).))..((((.((.((.....)).)).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.................)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.(((((((((((.)))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((.(((.....((......(.........(......)..........).......))....).)).)))))))....((((.....((((..((............))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..))))))..)))))...)))....)))).)))))).))))).. Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 25S ribosomal RNA 8civ c 1622 2.47 RF01960,RF02542,RF01959,RF00177 URS000268149F_4932 38030725 0003735 0005840 4932 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Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin; 18S ribosomal RNA 8cku AA 3190 3.11 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin; 25S ribosomal RNA 8cku BB 121 3.11 RF00001 URS000055688D_4932 38030725 0003735 0005840 4932 gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacuguaguuaagcugguaagagccugaccgaguaguguagugggugaccauacgcgaaacucaggugcugcaaucu <<<<<<<<<....<<<<<<<<.....<<.<<..............>>....>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>.....>>>>>>>>>>>>>>>. (((((((((....((((((((.....((((((...(....)...))).)..))....)))))).))((((((.......(((((..((....)).))))).....))))))))))))))). Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin; 5S ribosomal RNA 8cku c 1604 3.11 RF01960,RF02542,RF01959,RF00177 URS000268149C_4932 38030725 0003735 0005840 4932 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...((((..[.[[[..))))((((.((((((...(.(...((.....(((.(((..((....((....((......))...))[))......(((.......(((..((..((....(((........(...((......((.((.......)).))......))........((((.))))(.(.((((((....(......).)))))).)...)..)((((...((.....))..))))....)))...))))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.(.(...)).)...)))))).).....(.(((...((((.]...))).))))).)....).).....(....(..).....)....(.(.(..(..........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..[......((([[...(.(.((...(((.((....(.((((.((.().)).)))).).....(((((.((..(...(.(..((.......)).(((.....)))......)))...)).))..))).........((.......)).....))...(((.(((.((...((((..(((.((((((.....((........))........)))))).))).......((....))...))))..)).)))..))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..((((((((.(((........)))))))))))..)))...((..]]))...))...].))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((.(..(((.((((((......((........))..........((((..(....(.(..........((.(((........))).))........).)...((.(((...(.((((((....(((.((.((....))...(.((......)))...)).)))....(((((.((..((((..(((((.....((....)).......)))))..)))).))..(.((((((.....))))))....)..)))))....))).))).....).))))).....)..))))...)).)))).))).(...(((((((......((.....((..(.((....)).)..))....)).......)))))))......(.....(((((..........))))).....)..)..).))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(..(((((((.(((..(.((..(...((.().))...)..)).)..))).))))))).)..)).))))...).))...)..)..(((((((((....)))))))))}....... Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin; 18S ribosomal RNA 8cmj AA 3197 3.79 RF02543 URS000061F377_4932 38030725 0003735 0005840 4932 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........................<<<<<<.....<<....>>......>>>>>.>...{.....<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...........<<.<<<<<<...>>>>>>.>>.............<<<<<<.<<<<<.<<<<<<<<<<<<<<<.....<<<<......>>>>.(.......<<<......)>>>....>>>>>>>>>..>>>>.>>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]....}.............................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<.<..<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>......>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<....<<.<<<<<<<.....<<<....<<<..<.<<<<....<<<<<<...>>>>>>..>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<<....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.........<..<...........>.>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<<....<<<....>>>...<...<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>...>.....>>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<...............<<<<<...............>>>>><<.<<<<<<<<<<<.>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>...>>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<<<.<.<<<..........................................>>>.>>>.>>>>>>>>>>...<<<<<.....<<<<..<<<<........>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<...<<<<<<<<<<<}}}.>>>>>..>>>>>>..>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<.<..<<<<......>>>>..>>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((..(((((.((((((((...({((((......)))))[[(...).(((....}]])))....))))))))...))).)).....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.(((((....((((((((((((((.((((((((.......(((.(((......(((((((..))))))).......))).))).....))))).))).))))))........(((....)))....)))))))).....))))).))))).<(((..........)))((((((..(.(((((..((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....))))))..)))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((.....((((.....))))...)))).)..)))..)).).....)))))...((((..(((.(......))))..)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((.......(((.((((....)))))))....))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.(.............).)....))....))...(((((........)))))]]((((.((((.(((...((((....)))...(.[[((((((...(((.((.((((((((((((((((...{{..))))))(...(((((....(((((......((.....))......))))).....)))))....)((((((((....)))))))))))).).))))).).))))(...)....))))))...))....)))...)))))))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....))))).(.(((((((((((.)))))..)))))).).(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((.(.(..((......((((....))))......)))).))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((((((..(..((................(......)..................))..).).))))))))))...(((((.....((((..((............))..........]]...((.(((....))).))..))))..))))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((....((((((.(.((((((.......))))))...).((][.[[[))....))))))..(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((...(..(((((...((.......))...)))))....)..).)........((((.((.(((..(.(((((((......))))))..).).(((.(.....).))).....))).)..)...))).)......((((((....))).)))...a.))..))).)))))....((.(((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....))))).)).......(.((((.(((.((....((.(........(((((((..).)))))).....))).......((.(((...(((.(.(..(((......)))..).).))).))).)).............)).))).)))).)..(((((.(..(.......)..)...(.((((((.((.(((....((((.(..(((........)))..)))))...)))....)).).)))))).))))).. Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin; 25S ribosomal RNA 8csp A 737 2.66 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucaaauaaagcuaaaaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaauuuagcaguaaacugagaggcuuaguugaacagggcccugaagcgcgucgucaagucguaaaguguacuggaaagugcacuu ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<.....<<<<<<..............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>><.<<<<<......))..>>>>>.>.>>>.<<....<..<<<<....>>>>...>.>>..>>>>>>.....<<<<<<<<...<<<.<<<<<..<<<<<<<<<<......<<................>>.<<<<<<<.......<<.<<<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>>>>>>>>....>>>>>>>..>>>>.>>>>>>.....<<<<.....>>>>..>>>>>.....<<<<<<<...>>>>>>>.....>>>...>>>>>>>>..<<......>>..<<<<<<<<<....>>>>>>>>> [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((.....(((((((.....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))(.(((((......]]..))))).))))).((.......((((....)))).....))...))))).......(((((....(((.(((((..((((((((((......((................)).(((((((.......((.(((..(((((((.(...(((((.....))).......))..).).)))...))))))))....)))))))..))).))))))).....((((.....))))..))))).....(((((((...))))))).....)))....)))))....((......))..(((((((((....))))))))) Human mitochondrial small subunit assembly intermediate (State A); 12S mitochondrial rRNA 8csq A 802 2.54 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucaaauaaagcuaaaaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaauuuagcaguaaacugagaggcuuaguugaacagggcccugaagcgcgucgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaaaguguacuggaaagugcacuu ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<.....<<<<<<..............<<....>>.>>>>>>.....>>>>...>>>>.....<<<<<...<<...<<<<.........>>>>...>>>>>>>.<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>>.....<<<<<<<<...<<<.<<<<<.<<<<<<<<<<<......<<................>>.<<<<<<<.......<<.<<<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>>>>>>>>....>>>>>>>..>>>.>>>>>>>.>...<<<<.....>>>>..>>>>>.....<<<<<<<...>>>>>>>.....>>>...>>>>>>>>..<<.....<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>......>>..<<<<<<<<<....>>>>>>>>> [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((.....(((((((.....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))(.(((((......]]..))))).))))).((.......((((....)))).....))...))))).....(.(((.(....(((.(((((..(((((.((((......((................)).(((((((.......((.(((..(((((((.(...(((((.....))).......))..).).)))...))))))))....)))))))..))))..))))).....((((.....))))..))))).....(((((((...))))))).....)))....).))).)..((.....((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))......))..(((((((((....))))))))) Human mitochondrial small subunit assembly intermediate (State B); 12S mitochondrial rRNA 8csr A 853 2.54 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaauuuagcaguaaacugagaggcuuaguugaacagggcccugaagcgcgucgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaguaaguguacuggaaagugcacuuggac ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<......<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.......[[>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>>.....<<<<<<<<...<<<.<<<<<..<<<<<<<<<<......<<................>>.<<<<<<<.......<<.<<<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>>>>>>>>....>>>>>>>..>>>.>>>>>>>.....<<<<.....>>>>..>>>>>.....<<<<<<<...>>>>>>>.....>>>...>>>>>>>>..<<.....<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>......>>..]]<<<<<<<<<....>>>>>>>>>.... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((......(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((........{))))...))))))))......<...(.(((((......]]..))))).))))).((.......((((....)))).....))...))))).....(.(((((....(((.(((.(..((((((((((......((................)).(((((((.......((.(((..(((((((.(...(((((.....))).......))..).).)))...))))))))....)))))))..)))).)))))).....((((.....))))..).))).....((((.((...)).)))).....)))....))))).)..((.....((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))......))..}.(((((((((....)))))))))>... Human mitochondrial small subunit assembly intermediate (State C); 12S mitochondrial rRNA 8css A 846 2.36 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucaccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaauuuagcaguaaacugagaggcuuaguugaacagggcccugaagcgcgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaaguaaguguacuggnnagugcacuuggacg ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<.......<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>>.....<<<<<<<<...<<<.<<<<<..<<<<<<<<<<......<<................>>.<<<<<<<.......<<.<<<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>>>>>>>>....>>>>>>>..>>>.>>>>>>>.....<<<<.....>>>>..>>>>>.....<<<<<<<...>>>>>>>.....>>>...>>>>>>>>......<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>......<<<<<<<<<....>>>>>>>>>..... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((.......(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))..(..(.(((((....(((.(((((..((((((((((......((................)).(((((((.......((.(((..(((((((.(...(((((.....))).......))..).).)))...))))))))....)))))))..))).))))))).....((((.....))))..))))).....(((((((...))))))).....)))....))))).).)....((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))......(((((((((....)))))))))}.... Human mitochondrial small subunit assembly intermediate (State D); 12S mitochondrial rRNA 8cst A 888 2.85 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucaaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaaguaaguguacuggnnagugcacuuggacg ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<.....<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>>......<<<<<<<...<<<.<<<<<..<<<<<<<<.......<<........>>..........<<<<<<<.......<<.<<<..<<.<<<<.<..<<<<<.....>>>.......>>..>.>.>>>....>>>>>>>....>>>>>>>.....>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>.......<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>......<<<<<<<<<....>>>>>>>>>..... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((.....(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))..(..(.(((((.....((.(((((..((((((((.(.....((........))..........(((((.(.......((.(((..(((((((.(..(((((.....))).......))..).).)))...))))))))....).)))))...).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)).....))))).).)....((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))......(((((((((....)))))))))}.... Human mitochondrial small subunit assembly intermediate (State E); 12S mitochondrial rRNA 8csu A 881 3.03 URS0001A24B4C_9606 36482135 9606 auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucaaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgaucaccaccucuugcucagccuauauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcgucgucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaguaaguguacuggaaagugcacuuggac ..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<.....<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.......[[>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>>.....<<<<<<<<...<<<.<<<<...<<<<<<<<<<......<..>.<<<<<<<.......<<.<<<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>>>>>>>>....>>>>>>>..>>>.>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>......>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>..<<.....<<<<<<..<<<<<..<....<....<<<.....>>>...>.....>..>>>>>.>>>>>>......>>..]]<<<<<<<<<....>>>>>>>>>.... [.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((.....(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((........{))))...))))))))......<...(.(((((......]]..))))).))))).((.......((((....)))).....))...))))).....(.(((.......((..((.....((((.((((......(..).(((((((.......((.(((..(((((((.(...(((((.....))).......))..).).)))...))))))))....)))))))..))).).))))..(...((((.....)))).....(....(((((((.......)))))))....)..)....))......(((((((.........))))))).....)).......))).)..((.....((((((..(((((..((........(((.....))).......).)..))))).))))))......))..}.(((((((((....)))))))))>... Human mitochondrial small subunit assembly intermediate (State C*); 12S mitochondrial rRNA 8cvj 1A 2871 2.4 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<.......(...>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<<....>>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(..(((..........))..))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((..((((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).))))))))..))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8cvj 1x 77 2.4 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-part 8cvj 2A 2800 2.4 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (.(......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(...............)....))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(......[..(((((...(.(.....((((((((....))))))))...))...........].)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....).) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8cvj 2x 77 2.4 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-part 8cvk 1A 2871 2.5 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<.<..>.>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; 23S Ribosomal RNA 8cvk 1x 77 2.5 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-part 8cvk 2A 2800 2.5 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<............>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(...............)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(.........(((((...((......((((((((....))))))))...)).............)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; 23S Ribosomal RNA 8cvk 2x 77 2.5 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-part 8cvl 1A 2871 2.3 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.(((.(.((((((.(.........(((((..(((.......((((.((....)).))))....)))............)))))).)))))).).))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((.....))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution; 23S Ribosomal RNA 8cvl 1x 77 2.3 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution; P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-part 8cvl 2A 2800 2.3 RF02541 URS00001698E8_300852 36316410 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<............>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(...............)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(......[..(((((...(.......((((((((....))))))))....)...........].)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution; 23S Ribosomal RNA 8cvl 2x 77 2.3 RF00005 URS000041AF00_562 36316410 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution; P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-part 8d29 C 34 1.81 URS0002617793_32630 36413497 32630 ggcgauaccagcgaaacacgcccuuggcagcguc <<<<.<.<<<<<<.....>>>...>>>..>>>>> ((((...((((((.....)))...)))...)))) Crystal structure of theophylline aptamer - apo form; RNA (34-MER) 8ekb 1A 2871 2.7 RF02541 URS00001698E8_300852 36546783 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>>....<<<..>>>......>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<<....>>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((.(......).)..))...)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution; 23S Ribosomal RNA 8ekb 2A 2800 2.7 RF02541 URS00001698E8_300852 36546783 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.....((..........))......)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(.........(((((..((.......((((((((....))))))))....))............)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(............(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution; 23S Ribosomal RNA 8ekb 2x 76 2.7 RF00005 URS000041AF00_562 36546783 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolution; P-site deacylated tRNAmet 8emm a 2753 2.1 RF02541 URS00004B0F34_562 37308707 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<<.<<....>>..>>>>>>..>....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>>.....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>.....>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Composite 70S ribosome structure for ""Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates; 23S rRNA 8eyu B 45 1.95 URS000268140F_32630 37221204 32630 gcgccgggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<<<<<<<.....................>>>>>>>>>>>> ((((((((((((.........(..........))))))))))))) Structure of Beetroot dimer bound to DFAME; RNA (49-MER) 8eyu A 49 1.95 URS000268140F_32630 37221204 32630 gcgccgguuaggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<.....<<<<<.....................>>>>>.>>>>>> (((((((....(((((.........(..........))))))))))))) Structure of Beetroot dimer bound to DFAME; RNA (49-MER) 8eyv A 45 2.55 URS000268140F_32630 37221204 32630 gcgccgggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<<<<<<<.....................>>>>>>>>>>>> ((((((((((((.........(..........))))))))))))) Structure of Beetroot dimer bound to DFHO; RNA (45-MER) 8eyv B 45 2.55 URS000268140F_32630 37221204 32630 gcgccgggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<<<<<<<.....................>>>>>>>>>>>> ((((((((((((.........(..........))))))))))))) Structure of Beetroot dimer bound to DFHO; RNA (45-MER) 8eyw B 49 2.1 URS000268140F_32630 37221204 32630 gcgccgguuaggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<....<<<<<<.....................>>>>>>>>>>>> ((((((....((((((.........(..........))))))))))))) Beetroot dimer bound to ThT; RNA (49-MER) 8eyw A 45 2.1 URS000268140F_32630 37221204 32630 gcgccgggcagaggugggugguguggaggaguaucuguccggcgc <<<<<<<<<<<<.....................>>>>>>>>>>>> (.((((((((((.........(..........))))))))))).) Beetroot dimer bound to ThT; RNA (49-MER) 8f0n B 49 2.85 URS0002681412_32630 37221204 32630 gcgccgguuaggcaguggugggugguguggaggaguagcuguccggcgc <<<<<<....<<<<<<.....................>>>>>>>>>>>> ((((((....((((((.........(..........))))))))))))) Wobble Beetroot (A16U-U38G) dimer bound to DFHO; RNA (49-MER) 8f0n A 49 2.85 URS0002681412_32630 37221204 32630 gcgccgguuaggcaguggugggugguguggaggaguagcuguccggcgc <<<<<<<....<<<<<.....................>>>>>>>>>>>> (((((((....(((((.........(..........))))))))))))) Wobble Beetroot (A16U-U38G) dimer bound to DFHO; RNA (49-MER) 8fru 1 2551 2.49 RF02543 URS0002915677_941442 38242118 0003735 0005840 941442 cgcggcccgaggcggcgggggcgacgggcggaacuuaagcauaucaguacgccccggaggagaaaccaaccgggauuccccguagcggcgagcgacgcgggaggagcccgccccgaaggcgcgcuguggggcgcaccgccgcgagggggcccgagggccccgcccgagagggugcaagccccguacggcgggcggcgaguagcgcugcuugagcgugcagcgcgaagggaggcgcggcccuuccaaggcuaaauacgccccgggaccgauagcggaccaaguagcgcgagcgaacggugaaaaggacgcccugcggccgcucaaaagaccugaacccggccggccgccggcccgccggccccgucucgaaacacggaccgaggagccacgcgccgcggcgagcccgagggagcccccgcggcggagcgagcgcgagacgccccgggcccgccaugccccugcgggcgugcgcgggccgagccgcggcgcgugggcccgaaaggcggugaucuaugcccggcgagggcgaggccgggcgaaagccugguggaggcccgccgcggugcugacgcgcagaucgcucgucggagccgggcaugggggcgaaagacucaucgaaccgccugguagcugguugccuccgaaaugucucccaggacagccgccgccccgcaguugcggcccguagagcgcuggccggcgggagcggggccucgcccgccccccaaacuccgaagggccgcgccgccccgccgcuggccugggcggggcgggcgaaugcgggcggcgcgugggccccuccugguaagcaggacgggcgaggcgggacgauccggacgccgggccagggugcgccgccggggcccgcggaacggcgucggccggucccgacagcagccgaaucggccggcccggaaaauggagcgcgccggagccccggacccgcgcccggccgccgcgcgcggcggguaggaggccgcagaggccccgggggcgaaggcggcgcgcaggccccgccggaccggccucuggugcagaucucggcagcaguagccgcuacuccgcgccccggaggacugagggggagacggguuccgcggcgccugcaucuggccgcgggugacucgggccuaagcggcgggugaagaccgggaaggggcgugcccgcccgucgaacggggagccggcggagacuccggcaggcgcggcccccgcggagacgcccgccccccggcgacgcgcacggggaccgcggcgggcggcgccccggcccgcgaacgccccgcagcccccggacgccuugcgcggagaggggggcccgggggcggaccccgcgcguccccggccgccccugaaaagccggggggcgccggccgcgcgccguaccgaccgcagcaggacuccggggucagcagccucuagcgcgggagcgaacgcggcucagggaagucggcaagccggcuccguaaccucgggaaaaggaguggcucugacggccgggucagaacuggaacggacgcggggaucccgacuguuuacuagaaacacagcgucgcgagggccgcacccggcgcuggcgcgacgugauuucugcccagugccacgaccgucaccgugaagcgauccgccgaagcccugguaaacggcgggaguaacuaugacucucuuaagguagccaaaugccucgucgggcaauuuccgacgugcaugaauggaccaacgaggaucccacugucccgagccgcgccuccgcgagccuccagccucgggaacgggcgagggccggccagcggggcaagaagacccuuuugagcuugacuccagcccgggccuguggggcgggggccgccgccgccccgcucacccggucgcgcggggacccgcccgggcggggaguucggcuggggcggcgcgccugcuacaccggaccgcaggcgucccacggcgggcucagcgaggacggagaccucccgcggagcagaagggcacaagcccgcccgacccgcgccccccgugccggcgcgggccgcgaaagcggggccuaccgauccuucgccgccccggccgcgggcgcggagguggcagaaaaguuaccacagggauaacuggcuuguggccgccgagcgcccgcagcgacgcggcuuuuugauccuucgaugucggcucuuccuaccguccgcgcgcaccggcgcggaagcgucggauuguucacccguucaagggaucgugagcuggguuuagaccgucgugagacagguuaguuuuacccuacuggccccggggccagagcacggcgggccaguacgagaggaacgcccgccgcgggccgccagccccgcgguugcccggccgggcagcgccgcgccgccgcgcccgggggcccugcgcugaccgccucuaagcgcgcaccccgccucgcgccccgcccggccgcgcgccccagccccgugccccgucgccgagcggcccccgcccggggagaccacccggcgcggcgcuccuguacggcgcagagcccugcgaucgccugagggacgcgccugcagagcgc ........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<....<<.....>>.....>>>>>..[[[...<<<.............>>><<...<<<<<<....<<<<<......>>>>>((......<<<.....))>>>...>>>>>>>>........<<<<<<<........>>>>>>>...(((((..<<<<<<)))))..]]]..................................<<....>>................<<<....>>>............................<<<<<<..>>>>>>.<<<<........>>>>.<<<<<....<<<<<<<<<<<<<..<<<...<<<....>>>..>>>...<<....>>............<<<<<<<<<<<<<....>>>>>>>.>>>>>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<<.<<<.<<<<<<<<<...<<<...<<<..<<<<<..<<<<<..>>>>>>>>>>..>>>..>>.>...>>>>>>>.<<<<<<<<<<.........>>>>>>>>>>...>>>>>>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((...<<<<<<<........<<<.<<<<<<<<<.................>>>>>>>>>>>>..........)))......>>>>>>>>>>>..>>>>>>><<<<<....>>>>>....>>>>>><<<<<<<<<<...<<......<<<<<.<<....>>.>>>>>...>>>>>>>>>>.>>.....>>>>>.<<.....<<.....<<<<<.....>>>>>..<<.....<<<<..<<...<<<<<<...<.......>.>>>>>>....((<<<.<<...<<<...<<<....>>>......<<<<..>>>>...>>.>....>>...<<<<<........>>>>>))<<<<<<<<...<<<....>>>..<<<<<<<<<<...<<<..<<<<<<<<<<<<<<<<<...{{{...>>>>>....<<<<<<...<<<<<<....<<.....>>......>>>>>>...>>>>>>....>>>>>.>>>>>>>..>>>.........>>>>>>>>>>...>>>>>>>>.>>>..>>..<<......>>.>>>>.<<<<.....>>>>..>>....<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<......>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<.<...<<....<<<.<....>.>>>....>>.>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>....>>....<<<<<........>>>>>...((((((..{{{.........{{{..{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<.........>>>>>>>>>...<<<<......>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<.<<<<.......>>>>.>.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>>>>>.<<<....>>>.>>))).......(((((.(((((.>>>>>>))))))))))..........]]]]..}}.}}}.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<.........>>>....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........}}}.))))))..<<<<<..<<<..<<<<<<<<...............>>>>>>>><<<<<...<.<<...<<<<<<<<<<}}}.>>>>>..>>>>>...>>.>.>>>>>.<<<...<<<<<<...........>>>>>>...>>>..>>>..>>>>>....<<<<<<............................>>>>>>.....<<<<<.......>>>>..<<<<<<<<<<<....<<<<.<..<<...>>..>>>>>...>>>>.>>>>>.>>...>... ........................((((((.....(...[..)......))))).).........((....))...((((....((.]...)).....))))...((((..(((..((...)....))))((...(((((.....(((((......)))))[[(...).(((.....]])))....)))))))...)....(((((((........)))))))...(((((..[[[[[[)))))..)))..................................((....))............(...(((....)))...........)................((((((..))))))[((((........)))).(((((..(.(((((((((((((..((....(((....)))...))...((....))....(......)(((((((((((((....))))))).))))))...)))))))))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))....))))))))).(.((.......))...)..))))))......).))).((((((....(((((....)))))((((((((((.(((.(((((((((...(((...(((..(((((..(((((()))))))))))..)))..)).)...))))))).((((((((((.(......)))))))))))...))))))))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(((((((........(((.((((((((((.......(...)...)))))))))))))..........]]]......))))))))))...)))))))(((((....)))))....))))))(.((((((((...((......(((((.((....)).)))))...))))))))))..).....))))).((.....((.....(((((.....)))))..((.....((((..((..(((((((...(.......).)))))).....[(((.((...(((...(((....))).(....((((..)))).).)).)....))...(((((........)))))].((((((((...(((....)))..((((((((((...(((..(((((((((((((((((...{{{...)))))....((((((...((((((...(((.....))).....))))))...))))))....))))).)))))))..)))(...)....))))))))))...)))))))).))).)))..((......)).)))).((((.....))))..))....((((....((((((((.((..(....(.......(((((....(.{..).....)))))((.(((((((..)..)))))).))(...).......(((((((((.].((.........))...(((((((....((((....))))......))))))).}.(((.(((..((((((.(...((....(((.(....).)))....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))).))))))....)).{..(((((.....]}.)))))...((((((..(((.((......(((..((((((..(((((.((((((((..((((((((((.....)..)))))))))...((((......)))).....))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.(.((((.......)))).)...).((][.[[[))....))))))).(.((((((((.....{...)))))))))(((....))).))]]].].....(((((.(((((.]]]]]]))))))))))....)}....))))..)).))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(((((((((......))))))..))).(((.(.....).)))....)))))..)...))).).....(((((((....))).))))..>.))..))).))))))..(((((..(((..((((((((.....(....)....))))))))(((((...(.((...((((((((((}}}.)))))..)))))...)).).))))).(((....((((.............))))....)))..)))..)))))(...((((((........(..)................))))))..)..(((((.......))))..(((((((((((....((((.(..((...))..)))))...)))).))))).))...)... 60S subunit of the Giardia lamblia 80S ribosome; 28S rRNA 8g29 1A 2871 2.55 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.......>>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<......>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(....(..........)....)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; 23S Ribosomal RNA 8g29 1x 77 2.55 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; P-site Aminoacylated fMet-tRNAmet 8g29 2A 2800 2.55 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>..<....<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>>.<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...(.......((((((((....))))))))....)...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; 23S Ribosomal RNA 8g29 2x 77 2.55 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; P-site Aminoacylated fMet-tRNAmet 8g2a 1A 2871 2.45 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...((.().))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((..........)..))...))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution; 23S Ribosomal RNA 8g2a 1x 77 2.45 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution; P-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-part 8g2a 2A 2800 2.45 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (........((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(..)....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(...............).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..((.))......(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))......) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution; 23S Ribosomal RNA 8g2a 2x 77 2.45 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution; P-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-part 8g2b 1A 2871 2.55 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<..........>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((..)))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((.....))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution; 23S Ribosomal RNA 8g2b 1x 76 2.55 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution; P-site Aminoacylated fMet-tRNAmet 8g2b 2A 2800 2.55 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<..........>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution; 23S Ribosomal RNA 8g2b 2x 76 2.55 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution; P-site Aminoacylated fMet-tRNAmet 8g2c 1A 2871 2.65 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution; 23S Ribosomal RNA 8g2c 1x 77 2.65 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution; P-site Aminoacylated fMet-tRNAmet 8g2d 1A 2871 2.7 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....((((((((..[......))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((.(......).)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((.((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).)))))))))))).)))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((.....))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution; 23S Ribosomal RNA 8g2d 1x 76 2.7 RF00005 URS000041AF00_562 38238495 0030533 0006412 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution; P-site Deacylated tRNAmet 8g2d 2A 2800 2.7 RF02541 URS00001698E8_300852 38238495 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<<........>>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<...<<......<<<<<<<<....>>>>>>>>...>>.............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((((((......((..........)).......)))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((...((......((((((((....))))))))...))...........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution; 23S Ribosomal RNA 8g5y S2 1680 2.29 RF01960,RF02542,RF01959,RF00177 URS00026813DB_9606 37020024 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgcuccucucccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuuuuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<..................<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<......>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<.<<<....>>.>.>>>>>.>>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.....<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>....>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<..>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....((((....((.............((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(.((((..((((...).))).))))).).)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((..((....))...))))).))))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(.....(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((...............))))))).)).)....)....(((..(...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.((((......)))))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((..(((())))....)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state); 18S rRNA 8g5y L8 156 2.29 RF00002,RF02540 URS00004B2C76_9606 37020024 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state); 5.8S rRNA 8g5y L5 3721 2.29 RF02543 URS00026813F0_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccggcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggcccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugguagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccccggcgcccccccgguguccccgcgaggggcccggggcgggguccgccggcccugcgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgcgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>...<<<<<<<<<<...<<<<<<<<.<<.....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>.>>>>>>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<...<<<...<<<<<.<<<..<<<...>>>>>>>>>>>..>>>..>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<.<<<<<<<<<<<<<<<...<<..<<<..<.<<<<......<<<<<<<<..>>>>>>>>.......>>>>.>.>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<.<<<<<<<.<<<<....>>>>.>>>>>>>.>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>......>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<<....>>>>>>>>..<<<<<...<<<..<<<..((((.(((.>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<..................<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<<...>>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<........<<<<.<<....<<.........>>....>>.........<<......>>...>>>>....>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<...........))).)))).....................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<<<...>>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<...............<<<<<...............>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<<<<.<<<<...........<..<<...............................................................................>>..>.>>>>.>>.>>>>>>>>>>...<<<<<.....<<<<..<<.<<............>>>>..............<<<<<<<<<<<.....>>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<....<<<<<.................>>>>>..<<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<...>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....((((((((((...(((((.((.((.(...((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))))))).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((..(...((((((((.(((.....(((((((((((..((((((....(((.(.(((((.(((..(((...)))))))))))).)))...)))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((....((((......((((((((())))))))).......))))...)))........))))))..)))))))))))....................((((((.((((((())))))).((((((.((((.((((((((((((((((..((((((.((((....)))).))))))..))).)))))))))).)))...)))))))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...).)))...)))))))).<((((........))))((((((....(((((((((((((..(((..((((..........)))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[.)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((..................(((.((((((((.....((.....((.....((..((((((.((...)).)))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{..((((..((...((.........))...))......(...((......)).).))))....)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((...........]]].]]]]].......(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.((((.(.((...)).).)))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......(((......)))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.((((((((((((.((((...........(..((...............................................................................))..).)))).)).))))))))))...(((((.....((((..((.((............))))..............(((((((((((.....)))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...a.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).(((....((((.....}.......))))....)))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((...)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state); 28S rRNA 8g5y L7 120 2.29 RF00001 URS000002B0D5_9606 37020024 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state); 5S rRNA 8g5z S2 1701 2.64 RF01960,RF02542,RF01959,RF00177 URS00026813E7_9606 37020024 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggagcgggcguccccgccuuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggugcccuggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<..........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<......>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<.<<<....>>>..>>>>>.>>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<........................<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<......>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<<.......<<.<<<........>>>.>>.....>>>>>>.<.<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>>......>>>>>....>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<<..........>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....((((....((.....((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(.((((.((((......))))))))).).)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((.(((....)))..))))).))))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(........................(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((...............))))))).)).)....)....(((.((...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...))..))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.((((......)))))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((.(((((..........)))))...)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state); 18S rRNA 8g5z L8 156 2.64 RF00002,RF02540 URS00004B2C76_9606 37020024 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state); 5.8S rRNA 8g5z L5 3687 2.64 RF02543 URS00026813E5_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgaacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<<...>>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<.<<.<<.....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>.>>>>.>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<....<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<<...<<<<<.<<<..<<<..>>>>>>>>>>>..>>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<.<<<<...<<..<<<.<<.<<<<......<<<<<<<<..>>>>>>>>.......>>>>>>.>>>........>>>>>>...>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>.....>>>.>>>>>....>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<<....>>>>>>>>..<<<<<...<<<..<<<..((((.(((.>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<..............<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<.....>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<...........))).))))............................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<.<....>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<.......................>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<<.<<.<<<..........<<<<<........................>>>>>.>>>>>...>>>>>>>>>>...<<<<<.....<<<<..<<.<<<<<......>>>>>>>..............<<<<<<<<<<<.....>>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<....<<<<<......>>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..((((((((((((...))))))).))))....))))....((((((((((...(((((.((.((.....((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))).)))).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..((.(((...((.....(((((.(((..(((..)))))))))))....))..)))....)))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......((((((((..)))))))).......)))))).)))........))))))..)))))))))))......{.............((((((.((((((())))))).((((((.((((.((((((((((((((((((((((((.((((....)))).))))))))))).)))))))))).)))...)))))))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[.)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((..............(((.((((((((.....((.....((.....((..(((((..(.....)..))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(((((..((...((.........))...))......(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}..]]].]]]]]..............(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.(((((((.......))))))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((.......................)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......(((......)))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.(((((((.((.((.(((..........(((((........................))))).)))))...)).)))))))...(((((.....((((..((.(((((......)))))))..............(((((((((((.....)))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...b.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....a.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state); 28S rRNA 8g5z L7 120 2.64 RF00001 URS000002B0D5_9606 37020024 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state); 5S rRNA 8g60 L8 156 2.54 RF00002,RF02540 URS00004B2C76_9606 37020024 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state); 5.8S rRNA 8g60 L5 3637 2.54 RF02543 URS00026813F0_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccggggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucgggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcguccccggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgaacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcgcgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcuggguagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggcgccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu 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.........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..((((((.(((((...))))).).))))....))))....((((((((((...(((((.(.....(...((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))))...).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..((((((...((((.(.(((((.(((..(((.)))))))))))).))))..)))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......((((((((..)))))))).......)))))).)))........))))))..)))))))))))......{.............((((((.((((((())))))).((((((.((((.(((((((((((((.(((((((((.((((....)))).))))).))))..)))))))))).)))...)))))))).))..((((((((())))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[.)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((..............(((.((((((((.....((.....((.....(((..(((((.((...)).)))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(((((.(((...(...........)...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}..]]].]]]]].............)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.((((((.........)))))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((.....)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......(((......)))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.(((((((.((............................................................)).)))))))...(((((.....((((..((.((((........))))))..............((((((((()))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...b.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....a.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.(((......))).))))).......)))...(((...(((....((((.(((((((......)))))))))))...)))...)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state); 28S rRNA 8g61 S2 1682 2.94 RF01960,RF02542,RF01959,RF00177 URS00026813DB_9606 37020024 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuuguuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggugcccuggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<.<..<<....<<<<<..........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<......>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>>.>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<.<<<....>>>..>>>>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.....<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<<.<<<<<<<<...<<<......>>>......>>>>>>>>.>>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>......<.....<<<<<..........>>>>>.....>.....>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<<..........>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....(((((...((.....((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(.((((.((((......))))))))))).)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((.(((....)))..)))))).)))....(.(...(...........)...)......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(.....(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((...............))))))).)).)....)....(((.((...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...))..))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.((.(......).)))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((.(((((..........)))))...)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state); 18S rRNA 8g61 L5 3657 2.94 RF02543 URS00026813F0_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgaacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugguagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<<...>>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<<<<.<......<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>..>>>>>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<<...<<<<<.<<<..<<<..>>>>>>>>>>>..>>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<.<<<<<<<<<<<<<<<...<<..<<<.<<.<<<<......<<<<<<<<.>>>>>>>>.......>>>>>>.>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>......>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<<....>>>>>>>>..<<<<<...<<<..<<<..((((.((((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<..............<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<<...>>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))).))))..................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<.<....>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<<<<.<<<<..........<<<<<........................>>>>>.>>>>.>>.>>>>>>>>>>...<<<<<.....<<<<.....<<<<<......>>>>>................<<<<<<<<<<<.....>>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<.<.............>....<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....((((((((((...(((((.(.(...(...((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))))..)).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..((((((...((((.(.(((((.(((..(((..)))))))))))).))))..)))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......((((((((.)))))))).......)))))).)))........))))))..)))))))))))......{.............((((((.((((((())))))).((((((.((((.((((((((((((((((((((((((.((((....)))).))))))))))).)))))))))).)))...)))))))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((..(.(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((..............(((.((((((((.....((.....((.....(((..(((((.((...)).)))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(((((..((...((.........))...))......(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}.]]]].]]]]]....(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..........((.((((.((.......)).)))))).......)....))...(((((........)))))]]((((.(((((...((.((((....)))).))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....(......(((......)))......)..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.(((((.((((((.((((..........((((..........................)))).)))).)).)))).)))))...(((((.....((((.....(((.(......).)))................(((((((((((.....)))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...b.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....a.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state); 28S rRNA 8g6j S2 1701 2.8 RF01960,RF02542,RF01959,RF00177 URS00026813DB_9606 37020024 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggagcgggcguccccgccuuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggugcccuggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<..........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<......>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<.<<<....>>>..>>>>>.>>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<........................<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<......>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<<.......<<.<<<........>>>.>>.....>>>>>>.<.<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>>......>>>>>....>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<<..........>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....((((....((.....((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(.((((.((((......))))))))).).)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((.(((....)))..))))).))))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(........................(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((...............))))))).)).)....)....(((.((...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...))..))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.((((......)))))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((.(((((..........)))))...)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2); 18S rRNA 8g6j L8 156 2.8 RF00002,RF02540 URS00004B2C76_9606 37020024 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2); 5.8S rRNA 8g6j L5 3687 2.8 RF02543 URS00026813F0_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgaacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacaugagagguguagaauaagugggaggcccgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<<...>>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<.<<.<<.....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>.>>>>.>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<....<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<<...<<<<<.<<<..<<<..>>>>>>>>>>>..>>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<.<<<<...<<..<<<.<<.<<<<......<<<<<<<<..>>>>>>>>.......>>>>>>.>>>........>>>>>>...>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>.....>>>.>>>>>....>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<<....>>>>>>>>..<<<<<...<<<..<<<..((((.(((.>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<..............<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<.....>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<...........))).))))............................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<.<....>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<.......................>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<<.<<.<<<..........<<<<<........................>>>>>.>>>>>...>>>>>>>>>>...<<<<<.....<<<<..<<.<<<<<......>>>>>>>..............<<<<<<<<<<<.....>>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<....<<<<<......>>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..((((((((((((...))))))).))))....))))....((((((((((...(((((.((.((.....((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))).)))).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..((.(((...((.....(((((.(((..(((..)))))))))))....))..)))....)))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((.((.((((......((((((((..)))))))).......)))))).)))........))))))..)))))))))))......{.............((((((.((((((())))))).((((((.((((.((((((((((((((((((((((((.((((....)))).))))))))))).)))))))))).)))...)))))))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[.)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((..............(((.((((((((.....((.....((.....((..(((((..(.....)..))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(((((..((...((.........))...))......(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}..]]].]]]]]..............(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.(((((((.......))))))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((.......................)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......(((......)))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.(((((((.((.((.(((..........(((((........................))))).)))))...)).)))))))...(((((.....((((..((.(((((......)))))))..............(((((((((((.....)))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...b.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....a.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2); 28S rRNA 8g6w a 2753 2.02 RF02541 URS00004B0F34_562 37396857 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgnggauaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>.(<<...<<<<<<<...<<<<<<.......>>>>>>.....<<)..(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((..(((.....)))...))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((.(((()))).))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe; 23S rRNA 8g6x a 2753 2.31 RF02541 URS00004B0F34_562 37396857 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((.(((.(((...(((((......)))))[[(...).(((.....]])))...)))...))).)))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((.((((.....))))..))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((.(((()))).))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...(((((..)]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe; 23S rRNA 8g6y a 2753 2.09 RF02541 URS00004B0F34_562 37396857 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>.>......>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((.(((.....))).).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe; 23S rRNA 8g7p a 1529 2.9 RF00177,RF01959,RF02542,RF01960 38538914 0003735 0005840 562 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<..........>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<.......<<<<..>>>>......>>>>...<.<<<<<......<.<<<<<<<<.<...>.>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>.>>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>.............>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((.(((..........)))..)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))...(.(((((...(..(.((((((((.......)))))))).)...)....)))))....)..((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..)))).))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((...((.(((....))).)).....(.....)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I); 16S Ribosomal RNA 8g7r a 1528 2.8 RF00177,RF01959,RF02542,RF01960 URS00000ABFE9_562 38538914 0003735 0005840 562 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<.<<<<........>>>>..>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>....<....>...>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((.(((..........)))..)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))...(.(((((...(...((((.((((.......)))).))).)...)....)))))....)..((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((.(((....))).)))....(.....)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III); 16S Ribosomal RNA 8glp S2 1672 1.67 RF01960,RF02542,RF01959,RF00177 URS00026813DB_9606 37020024 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuuuuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<..........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<<....>>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<.<<<....>.>>.>>>>>.>>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.....<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<........<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>......>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<..>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((....((..........))...))[))......(((.......(((.(.(..((....((((....((.....((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(.((((..((((...).))).))))).).)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........(((((((((..((....))...))))).))))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(.....(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(((((((...............))))))).)).)....)....(((..(...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.(((((....))))))))))).)..))....((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..(((((((((((((....).)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((..(((())))....)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure); 18S rRNA 8glp L8 156 1.67 RF00002,RF02540 URS00004B2C76_9606 37020024 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure); 5.8S rRNA 8glp L5 3546 1.67 RF02543 URS00026813F0_9606 37020024 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgcggcggaucuuucccggcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgagccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggaaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugguagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugnngaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgcgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<<<<.<<.....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>.>>>>>>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<...<<<...<<<<<.<<<..<<<...>>>>>>>>>>>..>>>..>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<.<<<<<<<<<<<<<<<...<<..<<<..<.<<<<......<<<<<<<<..>>>>>>>>.......>>>>.>.>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>......>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<<....>>>>>>>>..<<<<<...<<<..<<<..((((.(((.>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<.................<<<.<<<<<<<<<...<<<....<<<..<.<<<..<<<<<<.<<...>>.>>>>>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<..>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<...........))).))))...............>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<<<...>>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<.<<..>>.>>>>>>...<<<<<.....<<<<..<<.<<<.<......>.>>>>>..............<<<<<<<<<<<.....>>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<...>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<.<..<<<<..>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....((((((((((...(((((.((.((.(...((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))))))).)))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..((((((....(((.(.(((((.(((..(((...)))))))))))).)))...)))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((......((((((((())))))))).......)))).).)))........))))))..)))))))))))....................((((((.((((((())))))).((((((.((((.(((((((((((((((((.((((((.((((....)))).)))))).)))).)))))))))).)))...)))))))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((((....))))))))..(((((...(((..(((..[[[[.[[[.)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((.................(((.((((((((.....((.....((.....((..((((((.((...)).)))))))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{..((((..))))....)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((...........]]].]]]]].(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.((((.((((...)))).)))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((....)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(..((......(((......)))......)))))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).)).....((((..(((.((......((((.(((((...(((((.(((((((((.((((((.((..)).))))))...(((((.....((((..((.((.(........).))))..............(((((((((((.....)))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...a.))..))).))))......(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....}.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((...)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..((((()))))..))).)....))....)))).))).))..))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure); 28S rRNA 8glp L7 120 1.67 RF00001 URS000002B0D5_9606 37020024 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure); 5S rRNA 8hsp A 1519 2.32 RF00177,RF01959,RF02542,RF01960 38538915 0003735 0005840 562 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<<.<<<..<<<..<<.<...<<<<<<<<<......>>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>.>>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((......)))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((.(....).))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....(((.((((.......)))).))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((...((.(((....))).)).....(.....)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state; 16S rRNA 8htz A 1519 2.4 RF00177,RF01959,RF02542,RF01960 38538915 0003735 0005840 562 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<<......>>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>.............>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((.(((((......)))))..)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))...(.(((((...(....((((((((.......)))))))).....)....)))))....)..((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((.(((....))).)))....(.....)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state; 16S rRNA 8hu1 A 1519 2.69 RF00177,RF01959,RF02542,RF01960 38538915 0003735 0005840 562 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<<......>>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<.......<<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>.............>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<..<.<<<<<<<........>>>>>>>>...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((......)))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))....(.....)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state; 16S rRNA 8hze A 35 1.59 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N; RNA (36-MER) 8hzf A 35 2.7 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N565; RNA (36-MER) 8hzf B 35 2.7 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N565; RNA (36-MER) 8hzj A 35 2.6 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N571; RNA (36-MER) 8hzj B 35 2.6 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N571; RNA (36-MER) 8hzm A 35 2.5 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N, manganese soak; RNA (36-MER) 8hzm B 35 2.5 38816645 32630 gaagauuguaaacaugccgaaaggcagacacuucc <<<<..........<<<<....>>>>....>>>>. ((((..........((((....))))....)))). A new fluorescent RNA aptamer bound with N, manganese soak; RNA (36-MER) 8jiv Aa 2863 2.84 RF02543 38458197 0003735 0005840 4565 gcgaccccaggucaggcgggacuacccgcugaguuuaagcauauaaanaagcggaggagaagaaacuuacaaggauuccccuaguaacggcgagcgaaccgggagcagcccagcuugagaaucgggcggcugugccguccgaanuguagucuggagaggcguccugcgacggaccgggcccaaguccccuggaaaggggcgccugggagggugagagccccguccggcccggacccugucgcgaggcgccucaacgagucggguuguuugggaaugcagcccaaaucgggcgguagacuccguccaaggcuaaauacaggcgagagaccgauagcgaacaaguaccgcgagggaaagaugnaaaggacuuugaaaagagagucaaaagugcuugaaauugccgggagggaagcggaugggggccggcgaugcgccccggccguaugcggaacggcugguccgccgcucggcucgggguguggacuguugucggccgcgccggcggccaaagcccgggggcccuaggugcccccgguggccgucgucggcacggccgcgcgccuaaaggcgugucccucggggcacugcgcugcaacggccugcgggcuccccauccgacccgucuugnaacncggaccaaggagunngacaugcgugcgagucgacggguucugaaaccugggaugcgcaaggaagcugacgagcgggaggcccugggccgcaccgcuggccgacccugaucuucugugaaggguucgaguuggagcacgccngucgggacccnanagauggugancuaugccugagcggggcgaagccagaggcucugguggaggcucgaagcgauacugncgugcaaaucguucgucugacuuggguauagnggcgaaagacuaaucgaaccaucuagungcugguucccuccgaaguuucccucaggauagcuggagcccaacgaguucuaucagguaaagccaaugauuagaggccuauucucaaacuuuaaanagguaggauggcgcggcugcuucggugagccgugccauggaaucgggcuccaagugggccauuuuugguaagcngaacuggcgaugcgggaugaaccggaagccggguuacggugcccaacugcgcgcuaaccuagaacccacaaaggguguuggucgaacuagccccgaaaauggauggcgcugaagcgcgcgacccacacccggccaucugggcgagcgccaugccccgaugnguaggagggcgcggcggccgcugcaaaacccggggcgcgagcccgggcggagcggccgucggugcagaunuuggugguagunncaaauauucaaaugagaanuuugaaggccgaagaggagaaagguuccaugugaacggnacuugcacauggguaagncgauccuaagggacgggguaaccccggcagauagcgcacgcgccccgaaagggaaucggguuaagauuucccgagccgggauguggcgguugacggcgacguuaggaaguccggagacgccggcgggggccucgggaagaguuaucuuuucugcuuaacggccugccaacccuggaaacgguucagccggagguaggguccaguggccggaagagcaccggguguccggugcgcccccggcggcccaugaaaauccggaggaccgccguucacgcccggucguacucauaancgnaucangucuncaaggugaacngccucuggccaauggaacaanguaggcaagggaagucggcaaaacggauccguaacuucgggaaaaggauuggcucugaggaccgacucagaacuggnacggacaagnngnauccgacuguuuaauuaaaacaaagcauugcgaugguccucgcggaugcugacgcaaugugauuucugccnagugcucugaaugucaaagugangaaauucaaccaagcncggguaaacggcaagguagcnaanugccucnucaunuaauuagugacgcgcaugaauggauuancgagauucccacugunccugucuacnauccagcgaaaccacagncaagggaacgggcuuggcggaaucancggngaaagaagacccunnugagcuugacncuaguccgacuuugugaauacuuauuccgugggucggaaguuuuggcuccaaggccggccgauccgggcggaagacauugucagguggggaguuuggcugnggcggcacaucuguuaaaagnuaacgcaggnnuccuaagaugagcucaacgagaacagaaaunucguguggaacaaaaggguaaaagcucguuugauncugauuuccagnacgaanacgaaccgugaaagcguggccuaucgauccuuuagcuucggaguuugaagcuanangugucagaaaaguuaccacagngauaacuggcuuguggcagcnaagcgauagcgacguugcuuuuugauccuungaugucggnucunccuaucauugugaagcagaauucaccanguguungaunnuucacccaccanuagggaacgugngnugggnuuagancgucgugagacagguuaguuuuacccuacugaugacagugucgcgauaguaauucaaccuaguacgagaggaaccguugauucacacaauuggucaucgcgcuugguugaaaagccaguggcgcgaagcuaccgugugccggauunugacugaacccucuaagucagaauccaagcuagcaugcgacgccucgacccacguuaggcccaagggcccgugggccgaagugcagcucccuucccgaauccuuuncagacgacnuaagacggggcauuguaaguggcagagugacgauccacugagauccagccccgucgcauucgu 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........................(((((......(...[..).......)))).).........((....))...((((.......(.]...)......))))...((((.........((((((((((...)))))))))....)........((((((.(..(((((((.(((((((...({((((......)))))[[(...).(((....}]])))....)))))))...)))))))..).))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((.(....).))...........).....................((((((.((.((..(...(....(...........(....(.)....)..............)....).(..(((((......((....(..(......(..((...(.....)..).)..).....)..)....))........((((........).................)))..)))))..)...)))..)).)))))).[((((........))))(((((...(.(.((((.((((((...(....(((........))).....).....(....).....(((((..(((((.)))))...)))))((((((((.....(....).....)).))).)))...)))))).)))).)..((.(...((((((.....((((((((((.((((...(((((((.)))))))...)[)))...(((..((.(........<.))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)(((((.(.((..(((.(((((.(......((.....((..(.((())).)..))...)).......).)))...(((((((((.(......))))))))))....)))))))).))).))..((((....((.....))....))))....(((......)))...(((((((...((([[[...(.((((((.......(..........(((.((((((...)))))))))..........]]].)....))))))))))...)))))))((((.((((.........)))).))))....))))))(.((((((((((.......(((.((((....)))))))....))))))))))..)......)))))((.....((.....((((.(.......).))))((((.....((((..((...((((((...((.....)).))))))....[[(((.((...(((..((((....)))..).....((....))..)))....))...(((((.........)))))]]((((..(((((((..((((....)))...(..<((((((...((((.(((((((((((((.((((...{{..)))).)(...((((((....(((((.....(((.....))).....)))))...).)))))....)(((((.))))))))).).))))))).))))(...)....))))))...)).)))).))).)))).)))..))......(......)..)))).((((.....))))..))))..(((......(((((((.((..(....(.......(((((....(.{..).....)))))((.(((((((..)..)))))).))(...).......(((((((((.].(...........)...(((((((....((((....))))......))))))).}.(.(.(((..((((((.(...(......(((......)))......).)))))..)))))......((..........(((((.......)))))..)..)....).)....)).))))))).)..))).)))))))...)))))....)).{...((((.....]}.))))......((((..(((.((......((((.(((((...(((((.(((.(((...(((..)))....((((.....((((..........>...(((())))..))))..)))).......))).)))..)))))..(((......[)).).(((((..........]))))).([((....((((((.(.((((((.......))))))...).((][.[[[))....))))))....(.(..((((....{..))))..).).((......)).))]]].].....((((((((((.]]]]]]))))))))))....)}.....)))..)))))).......(....(.((((.(...((....))...).))))...)....)........((((.((((((..(((.(((((......)))))...))).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...>.))..))).)))).....(((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..)))))..(((...((((............))))...)))..))))....)))))))...(.((.......(())....))).....(.(....)..)............((.(..(..(.......)..).(((((((.(((....((((.(..((.))..)))))...)))....)))))))..).)).. Atomic structure of wheat ribosome reveals unique features of the plant ribosomes; 25S rRNA 8jiv Ac 152 2.84 RF00002 38458197 0003735 0005840 4565 cgacucucggcaacggauaucucggcucucgcaucgaugaagnacguagcgaaaugcgauaccuggugugaauuncagaauccgugaaccaucgagucuuugaacgcaaguugcgcccgaggggccgagggcacgccugccugggcgucacg .........................................<<<<<<.((.....>>>....<<<<<<......)).............>>>>.>>..>>>....<<.....>><<<<..<<..>>..>>>>.................... .........................................((((((.[[.....))).....((((((.....]]...........).)))).)...)))....((.....))((((..((..))..)))).................... Atomic structure of wheat ribosome reveals unique features of the plant ribosomes; 5.8S rRNA 8jiw Ad 1571 2.88 RF01960,RF02542,RF01959,RF00177 38458197 0003735 0005840 4565 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcaugugcaaguaugaaccaaugaacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguacguacucggauaaccguaguaauucuagngcuaauacgugcaacaaaccccgacugggcgcauuuauuagauaugauccnaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaggggccuaccaugguggugacgggugacggagaauuaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggaaggcagcaggcgcgcnaauuacccaauccugacacggggaggunguganaauaaauaacaauaccgggugucugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcgguaauuccagcuccaauancguauauuuaaguugnugcaguunaaaagcucguaguuggaccuugggccggcaucguuacuuugaagaaauuagagugcucaaagcaagccaucgcucuggauncauungcaugggauaacaucauaggauuccaugaguaaugauuaauagggacagucgggggcauucguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcaggacuccgccggcaccuuaugagaaaucaaagucuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggcguggagccugcguuugaccaacacggggaaacuuaccgguccagacaagcagacugagagcucuuucuaugggugguggugcauggguucuuaguugguggagcgauuugucugguuaauuccguuaacgaacgagaccucagccugcuaacuagcuaugcggagcccuccgcagcuagcuucuuagagggacuaucgccguuuaggcgacggaaguuugaggcaauaacaggucugugaugcccuuagauguucugggccgcacgcgcgcuacacugauguauucaacgaguauauagccuuggccgacaggcccggguaaucuuggaauuucaucgugauggggauagaucauugcaauuggucuucaacgaggaaugccuaguaagcgcgagucaucacucgcguugacuacgucccugcccuuuguacacaccgnccgucgcuccuaccgauugaaugguccggugaaguguucggaucgcggucgcgagaaguccauugaaccuuaucauuuagagganggagaagucguaacaagguuuccguaggugnnccugcggaaggaucauug ...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<.........>>...>>.>>......<<........<<<..<<..<<....<<<<<.........<<.....<..<<<.....>>>..>......>>.........<<<.....>>>.....<<<<<<...................>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<..>>>>>>>.>>>......<<<.<...........>>.>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<................<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>........<<<<...>>>>......>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<....>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<..<<.......>>..........<<<<......<<<<.<<........>>....>>.>>...<<.<<<..<<.........<<<.<<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<..>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>................>>>>>>>.......>>.>>......>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>......>.>>>>......<....<<<<<<.......>>>>>>....>.....>>>>>>....<<<<<<<<......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))...(..(.(((...(.(...((.....(((.(((..((....((....((.........))...))[))......(((.......(((...(..((....(((((.....[...((.....(..(((.....)))..)......)).........(((.....))).(((.((..(.....................)..)).).).).(]((((..(((.))).))))).)))))...)))...))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.(......).)...)))))).).....(.(((....(((.]...)))..)))).)....).).....(((((((.(....).)))).)))....(.(((.(...........)).))......)..((((([[....(.((((.....((..]])).......))))))))))..))).).).....[......(.([[...(.(.((...(.(..(...............(((.((.((........(..((.......)).(((....))).....).......)).))...))).........(((...)))......)....(((.(((..(...(((...(((.(((((((....(..........).......))))))).))).......((....))....)))..)..)))..))..)).)...)).)....((((((....(....(.(.........).)....).))))))......{....((.((.(((..((((((((.(((.(.))))))))))))..)))...((..]]))...))...].)).)).).(((......((((....))))....)))...]]].](((((.(((((((..((..((.((..(((..(((...(.......)...........(((...(...(..(.((........))....)...)....(.(((...(.(..(.(..((..((((......))..(.((......)))...))..))....(((((.((..((((..(((..((((.((..)).))))....)))..)))).))..(...((((.....))))......)..))))).)..).....).....).))))......)..).))......)))..))).(...(.((.(.......((.......(((.((((....)))).)))....))......).)).)......(....(((.(.........).)))....)..)..)).)).....(.((((((......)))))).)......))...)))))))))).))..(.(..((.(.(((((.((..(.(((((((..(((..((((..(...((((....))))...)..))))..)))..))))))))..)).)))))..).))...)..)..(((.(((((....))))).)))}........ Atomic structure of wheat ribosome reveals unique features of the plant ribosomes; 18S rRNA 8k1e A 57 2.23 RF01684 9606 ggcgcugguggggcacguccagcacggcugggccgggguucgaguccccgcaguguu <<<<<<.<<<...>>><<<<<<.....>>>>>><<<<<.......>>>>>.>>>>>> (.((((((((..[)))((((((.....))))))(((((..]....)))))))))).) Crystal structure of a human menRNA; RNA (58-MER) 8k7w A 49 2.24 32630 gggacggucggguccagauauucguaucugucgaguagagugugggcuc <<<.<.......<<<<<<<<....>>>>>>..>>...........>>>> (((.....(...((((((((....))))))..)).........)..))) Crystal structure of Broccoli aptamer with DFHBI-1T; RNA (49-MER) 8k85 A 56 2.95 32630 ggagacggucggguccagucgcaacgauguuggcuguugaguagugugugggcucc ........................................................ ........................................................ Crystal structure of Red Broccoli aptamer with OBI; RNA (56-MER) 8k85 B 56 2.95 32630 ggagacggucggguccagucgcaacgauguuggcuguugaguagugugugggcucc ........................................................ ........................................................ Crystal structure of Red Broccoli aptamer with OBI; RNA (56-MER) 8oin B8 1571 3.6 RF02541 URS000022E3AE_9823 37141370 0003735 0005840 9823 accaaagcuagcucaacauacuaaacaaauacaaaaauacaccaaaauaaaauaaaacauucaccuaacauuaaaguauaggagauagaaauuuuuauccugacgcuauagagauaguaccguaagggaaagaugaaagaauaaaauaaaaguaaaaaaaagcaaagauuaccccuucuaccuuuugcauaaugguuuaaccagaaaaaaucuaacaaagagaacuuuagcuagauaccccgaaaccagacgagcuacccaugagcaguuuaaaagaaccaacucaucuauguggcaaaauagugagaagacuuguagguagaggugaaaagccuaacgagccuggugauagcugguuguccgagaaagaauuuuaguucaaccuuaaaaauaccccaaaaacccuaaauuccaauguauuuuuaagagauagucuaaaaagguacagcuuuuuagaaacggauacaaccuugacuagagaguaaaaucuuaauacuaccauaguaggccuaaaagcagccaucaauugagaaagcguuaaagcucaacaaauucaccaacauaaucccaaaaacuaauaacaaacuccuagcccaauaccggacuaaucuauugaaacauagaagcaauaauguuaauaugaguaacaagaagccuuucuccucgcacacgcuuacaucaguaacuaauaauauacugauaauuaacaaccaauaaaccaaaacaacacuaaaacguuuauuaauuacauuguuaacccaacacaggagugcaccaaggaaagauuaaaagaaguaaaaggaacucggcaaacacaaaccccgccuguuuaccaaaaacaucaccucuagcauuacuaguauuagaggcaaugccugcccagugacaccaguuuaacggccgcgguauucugaccgugcaaagguagcauaaucacuuguucuccaanuaaggacuuguaugaauggccacacgaggguuuuacugucucuuacuuccaaucagugaaauuaaccuucccgugaagaggcgggaauaaaaaaauaagacgagaagacccuauggagcuuuaauuaacuauuccaaaaguuaaacaacucaaccacaaagggauaaaacauaacuuaacauggacuagcaauuucgguugnggugaccucggaguacaaaaaacccuccgagugauuuuaaucuagacaaaccagucaaaauaaccauaacaucacuuauugauccaaaauuuugaucaacggaacaaguuacccuagggauaacagcgcaauccuguucuagaguuccuaucgacaauaggguuuacgaccucgauguuggaucaggacacccaaauggugcaaccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggagcaauccaggucgguuucuaucuauuauaaauuucucccaguacgaaaggacaagagaaaugggaccaaccucacaaacgcgucucagagauaauuaaugauuuaaucuuaaccuaauuaacucauaauaaauccagcccuagaacagggcaca <<.<......<<<<.......................................<......>.................<<.....>>..............>>.>>.............<<....>>...................>....>>...........<<<.......>>>...<.<........>.>..<<<<<........<<<<<.<..<<....>>...>.>>>>>..<<.<..<<<<<.<.....<<<.<<<<<..<<<......>>>...<<<..<<<<........>>>>.>>>....>>>>>.>>>...<<<.....>>>......>.>>>>...>..>.>>..<<<<<.....<<<<....>>>>..<<<<<<<<<<<<.....<<........>>.....>>>>>>>>>>>.>....<<<<<<<<<......>>>>>>>>>...<<......>>....<<<<.<<<...................<....<<<.........>>>....>.......<<<......>>>........................................>>>>>>>........>>>>>...<<<<<......>>>>>.........>>>>>.<......<<..<<<....>>><<<..<<<<........<<<<<....<<....>>..>>>>>......<<<..<<<<<<<.................>>>>>>>.......>>>.....<<......>>.>>>>.....>>>..<<<<....<<<<<<<.<<.........<.....<<<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>...<<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<.......>>>>>.....>....>>>.>..>>.>>>>>>...>..>>.>>>>>>>.>>>>.>>.....>.....<<<<<........>>>>>.......<<<.<<<.<<......<<<<.<<<<<<..<<<<..<<<.<<<<.<<<<<<............................>>>>>>....>>>>.>>>.>>>>..<<<<.....>>>><<<<<<...........>>>>>>.<<<<....<<...<<<......>>>...>>.........>>>>..........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<.<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>....>>..>>>>>>.<<.<<<<<<<.................>>>>>>><<<<<...<.........>.>>>>>.<<<...<<<<.<............>..>>>>...>>>.>>.........<<<<.......>>>>... ((.(...(..((((.......................................(...[..)........(..(.....((.]...))....)..)......)).)).............((....))....)..............)....))...........(((.......))).{.(.(........).)..(((((........(((((.(..((....))...).)))))..((.(...((((.(.....(((.((((((.((......[.))...(((..((((........)))).)))..).))))).))).(.(((.....)))...)..).))))......).))..(((((.....((((....))))...((((((((.((.....((........)).....)).))))))))......(((((((((......)))))))))...((......))....((((.(((...................(.(..(((.........)))..).)....(..(((......)))).......................................)))))))........)))))...(((((......))))).........))))).(......((..(((....)))(((..((((......(.(((((....((....))..)))))......(((..(((((((...........(..)..))))))).......))).)...((......)).)))).....)))..((((....(((((((.((..(....(.......((.(((((.].((.........))....((((((.............))))))....(((.(((..((.((....))...)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))).))..)..))).))))))).)))).)).....)..[..(((((.....}].))))).......(((.(((.((......((((.((((((..(((...(((.((((.((((((............................))))))....)))).)))..)))..(((......[)))((((((..........]))))))((((((..)((.(.(((...[..))))..)).........))))..........(((....))).....)].....))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(..(.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...)...).....(((((((....))).))))....))..)))))).((.(((((((......(....).....)))))))(((((...(.(.....).).))))).(((....((...................))....))).)).........((((.......))))... 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA; 16S rRNA 8oin AA 960 3.6 RF00177,RF02542 URS000268142B_9823 37141370 0003735 0005840 9823 acagguuugguccuggccuuucuauuaauucuuaauaaaauuacacaugcaaguauccgcgccccggugagaaugcccuccagaucuuaaagaucaaaaggagcagguaucaagcacaccuauaacgguagcucauaacgccuugcucaaccacacccccacgggaaacagcagugauaaaaauuaagccaugaacgaaaguuugacuaaguuauauuaauuagaguugguaaaucucgugccagccaccgcggucauacgauuaacccaaauuaauagauccacggcguaaagaguguuuaagaaaaaaaaucacaauagaguuaaauuauaacuaagcuguaaaaagcccuaguuaaaauaaaauaacccacgaaagugacucuaauaauccugacacacgauagcuaggacccaaacuggganuagauaccccacuaugccuagcccuaaacccaaauaguuacauaacaaaacuauucgccagaguacuacucgcaacugccuaaaacucaaaggacuuggcggugcuucacauccaccuagaggagccuguucuauaaucgauaaaccccgauagaccuuaccaacccuugccaauucagccuauauaccgccaucuucagcaaacccuaaaaaggaacaauaguaagcacaaucauagcacauaaaaacguuaggucaagguguagcuuauggguuggaaagaaaugggcuacauuuucuacauaagaauauccaccacacgaaaguuuuuaugaaacuaaaaaccaaaggaggauuuagcaguaaaucaagaauagagugcuugauugaauaaggccaugaagcacgcacacaccgncngucacccuccucaagcauguaguaauaaaaauaaccuauauucaauuacacaaccaugcaagaagagacaagucguaacaagguaagcauacuggnnagugugcuuggauuacc ..((((..<<<<<<.)))).<<<<<<<<<..<<<<<<<...<.<<<.<<<..<<....>>......<<......<<<<<...<<<<<...>>>>>...>>>.>>.<<<....<<...<<<......>>>..>>......>>>..<.....>.>>.<<<....>>>.....>>>>>>>.........<<....<<<<....>>>>..>>....>.>>>>>>...<.<<<<<<.....(((.....((.>>>)).......)))..>>>.>..>>>>>>>>>.....<<<((.....<<<<...<<..............<<<<<<.....<.<<<<<<.<<<......>>>..>>>>>>..>..........<<<....>>>>>>>>>......>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<<.....))..>>>>>>>.>>>.<<<........<<....>>......>>>..>>>>>><<<<<.<<<<<<<...<<..<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<..........<<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>>...>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>................<<<<<<<......>>>>>>>..........>>>>>.....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<...<<<.<<..<<<<<..<<<<<...<<<<.....>>>>..>>>>>.....>>>>>..>>.>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>........ [.[[[[..(((((..]]]]](((((((((..((((((((..(.(((.(((..((....))......(((.....(((((...(((((...)))))...))).)).(((....((..((((......))).)))......)))..(.....)))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...(.((([[[.....(((.....((.]]])).......)))..))).)..))))))))).....((([[...(.((((...((..............(((((((......((((((.((........))..))))))......).......((....)).))))))......))...))))....((((((...((...((((.........))))...))))))))......{...(((((((.....]]..))))))))))).(((........((....))......)))...)))))(((((.(((((((...((..(((((..((((((((((.....((........))..........(((((((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)))))))..)).)))))))).(...((((.....))))...........(....(((((((......)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(...(((.((..(((((..(((((...(((.......)))..))))).....)))))..)).)))....).))...)..)..(((((((((....)))))))))}....... 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA; 12S rRNA 8oip AA 960 3.6 RF00177,RF02542 URS00000CFF65_9823 37141370 0003735 0005840 9823 acagguuugguccuggccuuucuauuaauucuuaauaaaauuacacaugcaaguauccgcgccccggugagaaugcccuccagaucuuaaagaucaaaaggagcagguaucaagcacaccuauaacgguagcucauaacgccuugcucaaccacacccccacgggaaacagcagugauaaaaauuaagccaugaacgaaaguuugacuaaguuauauuaauuagaguugguaaaucucgugccagccaccgcggucauacgauuaacccaaauuaauagauccacggcguaaagaguguuuaagaaaaaaaaucacaauagaguuaaauuauaacuaagcuguaaaaagcccuaguuaaaauaaaauaacccacgaaagugacucuaauaauccugacacacgauagcuaggacccaaacuggganuagauaccccacuaugccuagcccuaaacccaaauaguuacauaacaaaacuauucgccagaguacuacucgcaacugccuaaaacucaaaggacuuggcggugcuucacauccaccuagaggagccuguucuauaaucgauaaaccccgauagaccuuaccaacccuugccaauucagccuauauaccgccaucuucagcaaacccuaaaaaggaacaauaguaagcacaaucauagcacauaaaaacguuaggucaagguguagcuuauggguuggaaagaaaugggcuacauuuucuacauaagaauauccaccacacgaaaguuuuuaugaaacuaaaaaccaaaggaggauuuagcaguaaaucaagaauagagugcuugauugaauaaggccaugaagcacgcacacaccgncngucacccuccucaagcauguaguaauaaaaauaaccuauauucaauuacacaaccaugcaagaagagacaagucguaacaagguaagcauacuggnnagugugcuuggauuacc ..((((..<<<<<<.)))).<<<<<<<<<..<<<<<<<...<.<<<.<<<..<<....>>......<<......<<<<<...<<<<<...>>>>>...>>>.>>.<<<....<<...<<<......>>>..>>......>>>..<.....>.>>.<<<....>>>.....>>>>>>>.........<<....<<<<....>>>>..>>....>.>>>>>>...<.<<<<<<.....(((.....((.>>>)).......)))..>>>.>..>>>>>>>>>.....<<<((.....<<<<...<<..............<<<<<<.....<.<<<<<<.<<<......>>>..>>>>>>..>..........<<<....>>>>>>>>>......>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<<.....))..>>>>>>>.>>>.<<<........<<....>>......>>>..>>>>>><<<<<.<<<<<<<...<<..<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<..........<<<.<<<..<<<<<<.......<<..<<<<<....>>>.......>>..>>......<<.....>>..........>>>...>>>>>>>>>...>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>................<<<<<<<......>>>>>>>..........>>>>>.....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<...<<<.<<..<<<<<..<<<<<...<<<<.....>>>>..>>>>>.....>>>>>..>>.>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>........ [.[[[[..(((((..]]]]](((((((((..((((((((..(.(((.(((..((....))......(((.....(((((...(((((...)))))...))).)).(((....((..((((......))).)))......)))..(.....)))).(((....))).....)))))))......(..((...(((((....)))).))).).)).))))))...(.((([[[.....(((.....((.]]])).......)))..))).)..))))))))).....((([[...(.((((...((..............(((((((......((((((.((........))..))))))......).....(.((....)))))))))......))...))))....((((((...((...((((.........))))...))))))))......{...(((((((.....]]..))))))))))).(((........((....))......)))...)))))(((((.(((((((...((..(((((..((((((((((.....((........))..........(((((((..(......).((.(((...((.(((.(....((..(((((....))).......))..))......((.....))......).).))....)).)))))....)))))))..)).)))))))).(...((((.....))))...........(....(((((((......)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(...(((.((..(((((..(((((...(((.......)))..))))).....)))))..)).)))....).))...)..)..(((((((((....)))))))))}....... 28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA; 12S rRNA 8oiq B8 1571 3.5 RF02541 URS000022E3AE_9823 37141370 0003735 0005840 9823 accaaagcuagcucaacauacuaaacaaauacaaaaauacaccaaaauaaaauaaaacauucaccuaacauuaaaguauaggagauagaaauuuuuauccugacgcuauagagauaguaccguaagggaaagaugaaagaauaaaauaaaaguaaaaaaaagcaaagauuaccccuucuaccuuuugcauaaugguuuaaccagaaaaaaucuaacaaagagaacuuuagcuagauaccccgaaaccagacgagcuacccaugagcaguuuaaaagaaccaacucaucuauguggcaaaauagugagaagacuuguagguagaggugaaaagccuaacgagccuggugauagcugguuguccgagaaagaauuuuaguucaaccuuaaaaauaccccaaaaacccuaaauuccaauguauuuuuaagagauagucuaaaaagguacagcuuuuuagaaacggauacaaccuugacuagagaguaaaaucuuaauacuaccauaguaggccuaaaagcagccaucaauugagaaagcguuaaagcucaacaaauucaccaacauaaucccaaaaacuaauaacaaacuccuagcccaauaccggacuaaucuauugaaacauagaagcaauaauguuaauaugaguaacaagaagccuuucuccucgcacacgcuuacaucaguaacuaauaauauacugauaauuaacaaccaauaaaccaaaacaacacuaaaacguuuauuaauuacauuguuaacccaacacaggagugcaccaaggaaagauuaaaagaaguaaaaggaacucggcaaacacaaaccccgccuguuuaccaaaaacaucaccucuagcauuacuaguauuagaggcaaugccugcccagugacaccaguuuaacggccgcgguauucugaccgugcaaagguagcauaaucacuuguucuccaanuaaggacuuguaugaauggccacacgaggguuuuacugucucuuacuuccaaucagugaaauuaaccuucccgugaagaggcgggaauaaaaaaauaagacgagaagacccuauggagcuuuaauuaacuauuccaaaaguuaaacaacucaaccacaaagggauaaaacauaacuuaacauggacuagcaauuucgguugnggugaccucggaguacaaaaaacccuccgagugauuuuaaucuagacaaaccagucaaaauaaccauaacaucacuuauugauccaaaauuuugaucaacggaacaaguuacccuagggauaacagcgcaauccuguucuagaguuccuaucgacaauaggguuuacgaccucgauguuggaucaggacacccaaauggugcaaccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggagcaauccaggucgguuucuaucuauuauaaauuucucccaguacgaaaggacaagagaaaugggaccaaccucacaaacgcgucucagagauaauuaaugauuuaaucuuaaccuaauuaacucauaauaaauccagcccuagaacagggcaca <<.<......<<<<.......................................<......>.................<<.....>>..............>>.>>.............<<....>>...................>....>>...........<<<.......>>>...<.<........>.>..<<<<<........<<<<<.<..<<....>>...>.>>>>>..<<.<..<<<<<.<.....<<<.<<<<<..<<<......>>>...<<<..<<<<........>>>>.>>>....>>>>>.>>>...<<<.....>>>......>.>>>>...>..>.>>..<<<<<.....<<<<....>>>>..<<<<<<<<<<<<.....<<........>>.....>>>>>>>>>>>.>....<<<<<<<<<......>>>>>>>>>...<<......>>....<<<<.<<<........................<<<.........>>>............<<<......>>>........................................>>>>>>>........>>>>>...<<<<<......>>>>>.........>>>>>.<......<<..<<<....>>><<<<.<<<<........<<<<<....<<....>>..>>>>>......<<<..<<<<<<<.................>>>>>>>.......>>>.....<<......>>.>>>>....>>>>..<<<<....<<<<<<<.<<.........<.....<<<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>...<<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<.......>>>>>.....>....>>>.>..>>.>>>>>>...>..>>.>>>>>>>.>>>>.>>.....>.....<<<<<........>>>>>.......<<<.<<<.<<......<<<<.<<<<<<..<<<<..<<<.<<<<.<<<<<<............................>>>>>>....>>>>.>>>.>>>>..<<<<.....>>>><<<<<<...........>>>>>>.<<<<....<<...<<<......>>>...>>.........>>>>..........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>>>>.<<.<<<<<<<.................>>>>>>><<<<<...<.........>.>>>>>.<<<...<<<<.<............>..>>>>...>>>.>>.........<<<<.......>>>>... ((.(...(..((((.......................................(...[..)........(..(.....((.]...))....)..)......)).)).............((....))....)..............)....))...........(((.......))).[.(.(........).)..(((((........(((((.(..((....))...).)))))..((.(...((((.(.....(((.((((((.((......[.))...(((..((((.......{)))).)))..).))))).))).(.(((.....)))...)..).))))......).))..(((((.....((((....))))...(((((((((((.....((........)).....)))))))))))......(((((((((......)))))))))...((......))....((((.(((...................(.(..(((.........)))..).)....(..(((......)))).......................................)))))))........)))))...(((((......))))).........))))).(......((..(((....)))(((..((((......(.(((((....((....))..)))))......(((..(((((((.................))))))).......))).)...((......)).)))).....)))..((((....(((((((.((..(....(.......((.(((((.].((.........))....((((((.............))))))....(((.(((..((.((....))...)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))).))..)..))).))))))).)))).)).....)..{..(((((.....]}.))))).......(((.(((.((......((((.((((((..((((..(((.((((.((((((............................))))))....)))).))).))))..(((......[)))((((((..........]))))))((((((..)((.(.(((...[..))))..)).........))))..........(((....))).....)].....))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(..(.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...)...).....(((((((....))).))))..}.))..)))))).((.(((((((......(....).....)))))))(((((...(.(.....).).))))).(((....((...................))....))).)).........((((.......))))... 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA; 16S rRNA 8oir B8 1558 3.1 RF02541 URS00021ED93A_9606 37141370 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<..<<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>...>..>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..<.....>..>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<<<........<<<....>>>.......>>>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<.<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>....>>..>>>.>>.....<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>.................<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(((........(((....))).......)))......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......(.((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))..).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). 55S human mitochondrial ribosome with mtRF1 and P-site tRNA; 16S rRNA 8oir AA 955 3.1 RF00177 URS0001A24B4C_9606 37141370 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<....<<.......>>....>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<.......))...>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<<...<<<<<<<.......>>>>>>>>...>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ 55S human mitochondrial ribosome with mtRF1 and P-site tRNA; 12S rRNA 8oir AI 33 3.1 37141370 9606 nnnnaugaggnnnnnnnnnnnnnnnnnnnnnnn ................................. ................................. 55S human mitochondrial ribosome with mtRF1 and P-site tRNA; mRNA 8ois AA 955 3.0 RF00177 URS0001A24B4C_9606 37141370 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<....<<.......>>....>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<.......))...>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<<...<<<<<<<.......>>>>>>>>...>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((...((((..((..(((....((.....))...)))..).)..))))..))))))....).))...)..)..(((((((((....)))))))))}........ 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA; 12S rRNA 8ois AI 33 3.0 37141370 9606 nnnnaugaggnnnnnnnnnnnnnnnnnnnnnnn ................................. ................................. 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA; mRNA 8oit B8 1558 2.9 RF02541 URS00021ED93A_9606 37141370 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggaacagcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacccacuaccuaaaaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacgaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcccagugacacauguuuaacggccgcgguacccuaaccgugcaaagguagcauaaucacuuguuccuuaanuagggaccuguaugaauggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaagaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacaguaccuaacaaacccacagguccuaaacuaccaaaccugcauuaaaaauuucgguugnggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacuacuauacucaauugauccaauaacuugaccaacggaacaaguuacccuagggauaacagcgcaauccuauucuagaguccauaucaacaauaggguuuacgaccucgauguuggaucaggacaucccgauggugcagccgcuauuaaagguucguunnuucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauuauacccacacccacccaagaacaggguuugu <<<.......<<<<.....................................<......>...............<<.....>>.............>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<..<<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>...>..>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<<......>>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>....................................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..<.....>..>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<.........<......<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>..>>>>><<<<<<......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>....>>.>>>>.....>..>>.>>>>>>>>>>>>.>>.....>.....<<<<<........>>>>>.......<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<....<<<........<<<....>>>.......>>>......>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>...........>>.........<<<....>>>............>>>>..>>>>>>.......<<<..<.<<<<<<...<<.......>>...>>>>>>...>.>>.>.......<.<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>..>....<<<<<<<....>>>.>>>>....>>..>>>.>>.....<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>.................<<<<.......>>>>.... ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....)))).((.((((((((((.....((..........)).....))))))))))..))..((((((((((......))))))))))...(((......)))....(((.(((...(..............(.(..(((.........)))..).)....(..(((......))))...................................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((.((.....)).)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((.(((..(((((....)))..)))))(((((........)))))........((..........(((((.......)))))..)..)....)))....)).))))....)..))).))))))).)))).)).....)).{..(((((.....]}.))))).......((..(((.((......((((.((((((..(((((.((((((((....(((........(((....))).......)))......)))))))))))))..(((......[)))((((((..........]))))))(.((.....((...(((....[..)))...))...........)).........(((....))).....)].....))))..))))))......((((..(.((((((.(.((.......)))..))))))...).)).).)......(.((.((((((..((.((((((......))))))...)).(((((.....))))).....)))))..)...))..).....(((((((....))).))))..}.))..))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(((................)))......).........(((((.......))))..). 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA; 16S rRNA 8ols A 390 3.0 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[((.....(.((((((((..((((.]......))))...)))).]]]]]]]...)))).).....))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((.(....).)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and intronistat B; Group IIC intron 8olv A 394 2.81 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ggggugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ........<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...[[[[[[[[[[[...........[[[[[......[[[...(((((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...)))))))...]]]...]]]]]]]]]]...]]]]]]...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .....[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((......(((...(((((((((((..((((........))))...)))).]]]]]]]...)))))))...)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850; Group IIC intron 8olw A 396 4.0 RF02001,RF01998 URS000080E361_182710 38898052 0000373 182710 guuaugugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg [[[[[.....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<..]]]]].>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>..<.<<<<....>>>>..>........<<<......<<<<......>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .{{{{..[<.((((({..(((((((((((...(((.......)))..((((....[[[[[[[....))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((.(((((.(.....)...((((......[(((..(.((((((((((..((((.]}}}}..))))...)))).]]]]]]]...)))))).)..)))....)))))))))....)))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B; Group IIC intron 8oly A 390 3.11 RF02001,RF01998 URS000080E176_182710 38898052 0000373 182710 gugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugug .....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>... ..[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..((((((((((((..((((.]......))))...)))).]]]]]]]...))))))))..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..))))))))))... Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B; Group IIC intron 8olz A 390 3.31 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..(((((...<<<<<<<...)))))..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...[[[[[[[[[[[...........[[[[[......[[[...(((((((<<<<..<<<<........>>>>...>>>>.>>>>>>>...)))))))...]]]...]]]]]]]]]]...]]]]]]...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..((((....[[[[[[[....))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((......(((...(((.(((((((..((((........))))...)))).]]]]]]]...))).)))...)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(.(.(....(((.(....).)))...)).)....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking; DOMAINS 1-5 8om2 r 1486 2.57 RF00177,RF01959,RF02542,RF01960 URS00029156C3_4932 38199006 0003735 0005840 4932 auaagaauaugauguugguucagauuaagcgcuaaauaaggacaugacacaugcgaaucauacguuuauuauugauaagauaauaaauaugugguguaaacgugaguaauuuuauuaggaauuaaugaacuauagaauaagcuaaauacuuaauauauaaaaaggauauauaauauauuuaucuauagucaagccaauaaugguuuagguaguagguuuauuaagaguuaaaccuagccaacgauccauaaucgauaaugaaaguuagaacgaucacguugacucugaaauauagucaauaucuauaagauacagcagugaggaauauuggacaaugaucgaaagauugauccaguuacuuauuaggaugauauauaaauauauauauauaaauugauuaaaaauaaaauccauaaauaauuaaaauaaugauauuaauuaccauauauuuuuauauggauauauuuuaauaguccugacuaauauuugugccagcagucgcgguaacacaaagagggcgagcguuaaucauaaugguuuaaaggauccguagaaugaauuauauauuauaauuuagaguuaauaaaauuaauuaaagaauuauaauaguaaagaugaaauaaauaauuauaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagggauuaaaacuagaguagcgaaacggauucgauacccguguaguucuaguaguaaacuaugaauacaauuauuuauauauauauauauaaauaauaaaugaaaaugaaaguauuccaccugaagaguacguuagcaauaaugaaacucaaaacaauagacgguuacagacuuaagcaguggagcauguuauuuaauucgauaauccacgacuaaccuuaccauauuuugaauauuauaauaauuaaauuauuauauuacaggcguuacauuguugucuuuaguucgugcugcaaaguuuuagauuaaguucauaaacgaacaaaacuccauauauauaauuuuaauuauauauaauuuuauauuauuuauuaauauaaagaaaggaauuaagacaaucauaaugauccuuauaauauggguaauagacgugcuauaauaaaaugauaauaaaauuauauaaaauauauuuaauuauauuuaauuaauaauauaaaacauuuuaauuuuuaauauauuuuuuuauuauauauuaauaugaauuauaaucugaaauucgauuauaugaaaaaagaauugcuaguaauacguaaauuaguauguuacggugaauauucuaacuguuucgcacuaaucacucaucacgcguugaaacauauuauuaucuuauuauuuauauaauauuuuuuaauaaauuuauuaauuuauauuuauuuauaucagaaauaauaugaauuaaugcgaaguugaaauacaguuaccguaggggaaccugcggugggcuuauaaauaucuuaaauauucuuaca ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<<<<<<<<<<<.....>>>>>>>>>>..>>>>>.....<<<........<<<<<.<<.........<<<<<<<<.<<<<.......>>>>...........<<<<<<<<.>>>>>>>>.>>>>>>>>....>>>>>>><<<....<<<..<<<<<<<<........>>>>>>>>>>>......>>>..<<<<.<<<<....>>>>...>>>>.>>><<<<<<.........>>>>>><<<<.....>>>>..>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.<<<<..<<<<<<........>>>>>>..<<......>>.....>>>>..<<<<<<<<..............>>>>><<<<<<<....>>>>>>><<..>>>>>....<<<<<(((.....<<<<.....<<.)))>>.......>>>>.>>>>>..>>>>>>>>>.....<<<((.....<<<<...<.<<.<<<<<<<...>>>>>>>...<<<<<<<<...<<<<<<<<<<..<<<<<<<...................>>>>>>>..>>.......<<....>>.>>>>>>>>.>>>>>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<..>>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<.......<<<<....>>>>.....>>..)))).]<<.<<...<<<<....<.<<<<<..<<<<<<<<<<............................<<<<<<<.....<<.<<<<<<<<<<.>>>>>>>>>>.>>.<<<.<<..<<<<<<<<<<<<..<<<<<<<<<....>>>....<<......>>....>>>>>>.....<<<.<<<<<<<<........>>>>>>>>..<<<<<<<<<.....>>>>>>>>>....>>>...>>>>>>>...>>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<........<<<..<<..<<<<<<......>>>>>>..>>....>>>......>>>>>>......<<<<<........>>>>>..........<....<<<<<<<........>>>>>>>....>.....>>>>>.....<<.<<<<<.........>>>>>>>.....>.....>>>>..>>..>>....<.<<<.<.<<<<<<<<..<<<<<<<<<.<<<...<<<..<<<.<<<<<...<<<<<<<..>>>>>>>...>>>>>>>>..>>>..>>>>>>>>>>>>..>>>>>>>>..>.>>>..>.....<<<<<<<<<....>>>>>>>>>............................. ....((((..[.[[[[.)))).((((.(((((..(((((((((....(((.(((..(((..((((((((((((.....))))))))))..))))).....((((.......(((((.((...(...(.((((((((.((((.......))))...........((((((((.)))))))).))))))))).).)))))))(((....(((..((((((((........)))))))))))......)))..((((.((((....))))...))))))))((((((.........))))))(((((..).))))..)))))).).....(.(((...(((((....)))).))))).)).)))))).((((..((((.(........).))))..((......)).....))))....((((....(.......).....)))(((((((....))))))).(()).)......((((([[[.....((((.....((.]]])).......)))).)))))..)))))))))...(.((([[...(.((((...(.((.(((((((...)))))))..(((((((((...((((((((((..(((((((...................)))))))..)).......((....)).)))))))).))))))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((.(((((((((((((..)))))))))))))..((..]]))....)))))))))))((.......((((....)))).....))..]]]].]((.((...((((....(.(((....((((((((((......(..........)........(.(((((((..(..((.(((((.((((.)))).))))).))).((.((...((((((((.(...(((((((((....)))....((......))....)))))).....(((.((((((((........))))))))..((((((((((..).)))))))))....)))....).)))).)..))).))))....))))))))..)).)))))))).(...((((((........(((..((...(((((......)))))...))....)))......))))))......(((((.(....).)))))..........(....(((((((........)))))))....)..)....))).....((.(((((.........))))))).....).....))))..))..))..(.(..((.(.((((((((..(((((((((.(((...(((..(((.(((((...(((((((..)))))))...))))))))..)))..))))))))))))..))))))))..).))...)..)..(((((((((....)))))))))}............................ Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.; 15S mitochondrial rRNA 8om3 r 1487 2.87 RF00177,RF01959,RF02542,RF01960 URS00029156C3_4932 38199006 0003735 0005840 4932 auaagaauaugauguugguucagauuaagcgcuaaauaaggacaugacacaugcgaaucauacguuuauuauugauaagauaauaaauaugugguguaaacgugaguaauuuuauuaggaauuaaugaacuauagaauaagcuaaauacuuaauauauaaaaaggauauauaauauauuuaucuauagucaagccaauaaugguuuagguaguagguuuauuaagaguuaaaccuagccaacgauccauaaucgauaaugaaaguuagaacgaucacguugacucugaaauauagucaauaucuauaagauacagcagugaggaauauuggacaaugaucgaaagauugauccaguuacuuauuaggaugauauauaaauauauauauauaaauugauuaaaaauaaaauccauaaauaauuaaaauaaugauauuaauuaccauauauuuuuauauggauauauuuuaauaguccugacuaauauuugugccagcagucgcgguaacacaaagagggcgagcguuaaucauaaugguuuaaaggauccguagaaugaauuauauauuauaauuuagaguuaauaaaauuaauuaaagaauuauaauaguaaagaugaaauaaauaauuauaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagggauuaaaacuagaguagcgaaacggauucgauacccguguaguucuaguaguaaacuaugaauacaauuauuuauauauauauauauaaauaauaaaugaaaaugaaaguauuccaccugaagaguacguuagcaauaaugaaacucaaaacaauagacgguuacagacuuaagcaguggagcauguuauuuaauucgauaauccacgacuaaccuuaccauauuuugaauauuauaauaauuaaauuauuauauuacaggcguuacauuguugucuuuaguucgugcugcaaaguuuuagauuaaguucauaaacgaacaaaacuccauauauauaauuuuaauuauauauaauuuuauauuauuuauuaauauaaagaaaggaauuaagacaaaucauaaugauccuuauaauauggguaauagacgugcuauaauaaaaugauaauaaaauuauauaaaauauauuuaauuauauuuaauuaauaauauaaaacauuuuaauuuuuaauauauuuuuuuauuauauauuaauaugaauuauaaucugaaauucgauuauaugaaaaaagaauugcuaguaauacguaaauuaguauguuacggugaauauucuaacuguuucgcacuaaucacucaucacgcguugaaacauauuauuaucuuauuauuuauauaauauuuuuuaauaaauuuauuaauuuauauuuauuuauaucagaaauaauaugaauuaaugcgaaguugaaauacaguuaccguaggggaaccugcggugggcuuauaaauaucuuaaauauucuuaca ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<......<<<.<<<..<<<..<<<<<<<<<<<<.....>>>>>>>>>>..>>>>>.....<<<........<<<<<.<<.........<<<<<<<<.<<<<.......>>>>...........<<<<<<<<.>>>>>>>>.>>>>>>>>....>>>>>>><<<....<<<..<<<<<<<<........>>>>>>>>>>>......>>>..<<<<.<<<<....>>>>...>>>>.>>><<<<<<.........>>>>>><<<<.....>>>>..>>>>>>.........<<<....<<<<....>>>>..>>>...>.>>>>>>.<<<<..<<<<<<........>>>>>>..<<......>>.....>>>>..<<<<<<<<..............>>>>><<<<<<<....>>>>>>><<..>>>>>....<<<<<(((.....<<<<.....<<.)))>>.......>>>>.>>>>>..>>>>>>>>>.....<<<((.....<<<<...<.<<.<<<<<<<...>>>>>>>...<<<<<<<<...<<<<<<<<<<..<<<<<<<...................>>>>>>>..>>.......<<....>>.>>>>>>>>.>>>>>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<..>>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<.......<<<<....>>>>.....>>..)))).]<<.<<...<<<<.....<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<.....<<.<<<<<<<<<<.>>>>>>>>>>.>>.<<<.<<<..<<<<<<<<<<<..<<<<<<<<<....>>>....<<......>>....>>>>>>.....<<<.<<<<<<<<........>>>>>>>>..<<<<<<<<<.....>>>>>>>>>....>>>...>>>>>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<........<<<..<<..<<<<<<......>>>>>>..>>....>>>......>>>>>>......<<<<<........>>>>>..........<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<.<<<<<.........>>>>>>>...........>>>>..>>..>>....<.<<<.<.<<<<<<<<..<<<<<<<<<.<<<...<<<..<<<.<<<<<...<<<<<<<..>>>>>>>...>>>>>>>>..>>>..>>>>>>>>>>>>..>>>>>>>>..>.>>>..>.....<<<<<<<<<....>>>>>>>>>............................. ....((((..[.[[[[.)))).((((.(((((..(((((((((....(((.(((..(((..((((((((((((.....))))))))))..))))).....((((.......(((((.((...(...(.((((((((.((((.......))))...........((((((((.)))))))).))))))))).).)))))))(((....(((..((((((((........)))))))))))......)))..((((.((((....))))...))))))))((((((.........))))))(((((..).))))..)))))).).....(.(((...(((((....)))).))))).)).)))))).((((..((((.(........).))))..((......)).....))))....((((....(.......).....)))(((((((....))))))).(()).)......((((([[[.....((((.....((.]]])).......)))).)))))..)))))))))...(.((([[...(.((((...(.((.(((((((...)))))))..(((((((((...((((((((((..(((((((...................)))))))..)).......((....)).)))))))).))))))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((.(((((((((((((..)))))))))))))..((..]]))....)))))))))))((.......((((....)))).....))..]]]].]((.((...((((.....((((((..((((((((((......((........))..........(((((((..(..((.(((((.((((.)))).))))).))).((.(((..(((((((((((..(((((((((....)))....((......))....)))))).....(((.((((((((........))))))))..((((((((((..).)))))))))....)))...))))).)))...))))))))....)))))))...)).)))))))).(...((((((........(((..((...(((((......)))))...))....)))......))))))......(((((.(....).)))))..........(....(((((((........)))))))....)..)..))))))....((.(((((.........)))))))...........))))..))..))..(.(..((.(.((((((((..(((((((((.(((...(((..(((.(((((...(((((((..)))))))...))))))))..)))..))))))))))))..))))))))..).))...)..)..(((((((((....)))))))))}............................ Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.; 15S mitochondrial rRNA 8om4 r 1487 2.32 RF00177,RF01959,RF02542,RF01960 URS00029156C3_4932 38199006 0003735 0005840 4932 auaagaauaugauguugguucagauuaagcgcuaaauaaggacaugacacaugcgaaucauacguuuauuauugauaagauaauaaauaugugguguaaacgugaguaauuuuauuaggaauuaaugaacuauagaauaagcuaaauacuuaauauauaaaaaggauauauaauauauuuaucuauagucaagccaauaaugguuuagguaguagguuuauuaagaguuaaaccuagccaacgauccauaaucgauaaugaaaguuagaacgaucacguugacucugaaauauagucaauaucuauaagauacagcagugaggaauauuggacaaugaucgaaagauugauccaguuacuuauuaggaugauauauaaauauauauauauaaauugauuaaaaauaaaauccauaaauaauuaaaauaaugauauuaauuaccauauauuuuuauauggauauauuuuaauaguccugacuaauauuugugccagcagucgcgguaacacaaagagggcgagcguuaaucauaaugguuuaaaggauccguagaaugaauuauauauuauaauuuagaguuaauaaaauuaauuaaagaauuauaauaguaaagaugaaauaaauaauuauaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagggauuaaaacuagaguagcgaaacggauucgauacccguguaguucuaguaguaaacuaugaauacaauuauuuauauauauauauauaaauaauaaaugaaaaugaaaguauuccaccugaagaguacguuagcaauaaugaaacucaaaacaauagacgguuacagacuuaagcaguggagcauguuauuuaauucgauaauccacgacuaaccuuaccauauuuugaauauuauaauaauuaaauuauuauauuacaggcguuacauuguugucuuuaguucgugcugcaaaguuuuagauuaaguucauaaacgaacaaaacuccauauauauaauuuuaauuauauauaauuuuauauuauuuauuaauauaaagaaaggaauuaagacaaaucauaaugauccuuauaauauggguaauagacgugcuauaauaaaaugauaauaaaauuauauaaaauauauuuaauuauauuuaauuaauaauauaaaacauuuuaauuuuuaauauauuuuuuuauuauauauuaauaugaauuauaaucugaaauucgauuauaugaaaaaagaauugcuaguaauacguaaauuaguauguuacggugaauauucuaacuguuucgcacuaaucacucaucacgcguugaaacauauuauuaucuuauuauuuauauaauauuuuuuaauaaauuuauuaauuuauauuuauuuauaucagaaauaauaugaauuaaugcgaaguugaaauacaguuaccguaggggaaccugcggugggcuuauaaauaucuuaaauauucuuaca ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<<<<<<<<<<<.....>>>>>>>>>>..>>>>>.....<<<........<<<<<.<<.........<<<<<<<<.<<<<.......>>>>...........<<<<<<<<.>>>>>>>>.>>>>>>>>....>>>>>>><<<....<<<..<<<<<<<<........>>>>>>>>>>>......>>>..<<<<.<<<<....>>>>...>>>>.>>><<<<<<.........>>>>>><<<<.....>>>>..>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.<<<<..<<<<<<........>>>>>>..<<......>>.....>>>>..<<<<<<<<..............>>>>><<<<<<<....>>>>>>><<..>>>>>....<<<<<(((.....<<<<.....<<.)))>>.......>>>>.>>>>>..>>>>>>>>>.....<<<((.....<<<<...<.<<.<<<<<<<...>>>>>>>...<<<<<<<<...<<<<<<<<<<..<<<<<<<...................>>>>>>>..>>.......<<....>>.>>>>>>>>.>>>>>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<..>>>>>>>>>>>>>..<<..))>>....>>>>>>.>>>.<<.......<<<<....>>>>.....>>..)))).]<<.<<...<<<<.....<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<.....<<.<<<<<<<<<<.>>>>>>>>>>.>>.<<<.<<<..<<<<<<<<<<<..<<<<<<<<<....>>>....<<......>>....>>>>>>.....<<<.<<<<<<<<........>>>>>>>>..<<<<<<<<<.....>>>>>>>>>....>>>...>>>>>.>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<........<<<..<<..<<<<<<......>>>>>>..>>....>>>......>>>>>>......<<<<<.<....>.>>>>>..........<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<.<<<<<.........>>>>>>>...........>>>>..>>..>>....<.<<<.<.<<<<<<<<..<<<<<<<<<.<<<...<<<..<<<.<<<<<...<<<<<<<..>>>>>>>...>>>>>>>>..>>>..>>>>>>>>>>>>..>>>>>>>>..>.>>>..>.....<<<<<<<<<....>>>>>>>>>............................. ....((((..[.[[[[.)))).((((.(((((..(((((((((....(((.(((..(((..((((((((((((.....))))))))))..))))).....((((.......(((((.((...(...(.((((((((.((((.......))))...........((((((((.)))))))).))))))))).).)))))))(((....(((..((((((((........)))))))))))......)))..((((.((((....))))...))))))))((((((.........))))))(((((..).))))..)))))).).....(.(((...(((((....)))).))))).)).)))))).((((..((((.(........).))))..((......)).....))))....((((....(.......).....)))(((((((....))))))).(()).)......((((([[[.....((((.....((.]]])).......)))).)))))..)))))))))...(.((([[...(.((((...(.((.(((((((...)))))))..(((((((((...((((((((((..(((((((...................)))))))..)).......((....)).)))))))).))))))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((.(((((((((((((..)))))))))))))..((..]]))....)))))))))))((.......((((....)))).....))..]]]].]((.((...((((.....((((((..((((((((((......((........))..........(((((((..(..((.(((((.((((.)))).))))).))).((.(((..(((((((((((..(((((((((....)))....((......))....)))))).....(((.((((((((........))))))))..((((((((((..).)))))))))....)))...))))).)))...))))))))....)))))))...)).)))))))).(...((((((........(((..((...(((((......)))))...))....)))......))))))......(((((.(....).)))))..........(....(((((((........)))))))....)..)..))))))....((.(((((.........)))))))...........))))..))..))..(.(..((.(.((((((((..(((((((((.(((...(((..(((.(((((...(((((((..)))))))...))))))))..)))..))))))))))))..))))))))..).))...)..)..(((((((((....)))))))))}............................ Small subunit of yeast mitochondrial ribosome.; 15S mitochondrial rRNA 8ova BA 1604 2.47 RF02543 URS00029156E1_5702 37985661 0003735 0005840 5702 agaccugaguguggcaggaccacccgcuaaacuuaagcanauuacucagcggaggaaaagaaaacaaccgugauucucucagucagcggcgagcgaagagggauucaacucguugccgaaucgggucuuauaugaccucgaacuguggcauagggcuggugcaggcguggcggaauucaauugcaaagcaaacccguugcugaacauuacaacccuucaugugnguauugagccaaagaaggugucagcccauuacagccacggagccuacgcgccuccucaagagaguagcacuguuugggaaugcagugucaagccggcagguauuugucugccaagguuaaauauagaguaggaagaccgauagcgaacaaguagcgugagcgaaaguuugaaaaguacuuuggaaagagagugacauagaaccugaaaucgugacaacgacaauggaaguaccuucauuucucggccagacccaaccucgccgcgcaauuuccuuccggggcuaacauccggugggucacugugcggguuucgaggucauggggugcgugagugggcggaauaaagggucgguguguuguguucuuccuccuucccuguccgugcgucucgacgcuggcgauggaaauggggugcccccacccgucuugnnacncggaccaaggagunanacagacgcgcaagggaggaguauugugacaacucuuuucucguacugaaagggaggugugauacacccguggcgugcgcaauuuuuugcccaacaccgaccggcccuccgugggcugcgcgcgagugugccunnuuggacccnanagguggugaacuaugccugaacaaggugaagcccggggaaaccccgguggaggccuguagcgaugcugncgugcaaaungcucguacgauuugggunucgnagcgaaagacucaucgaaccaccuaguagcugguucacgucgaaguuucccucaggauagcuggugcuugucaagaaguauugugcgguaaagcaaaugauuagagggaccuauucucaaacuuuaaangugcaaacaacccagccuuaguuauuuuaacaaggcuuuaagaauugaggcaccaagugggccuucuucgguaagcngagcaggcgaugcggaaugaaccgcuuagggauauguggcgucaaaacuugugggcucauunucgauacgugaaaaggguguugguggauauccaccggccccgaaaauggangacgcuuaagccccaugugcgugauugcccauuauuccuuuggugagggcggcuauauggugagaaaguguagcccucccgauguagacguggcgugggggugaggacgaagccgauggcgcgagccucggauggacccgccucuagugcanaunuugguuggcgunncaaagaucuaacggaauauuuuuaaaugcaacguuggauncuggagcggggaaggauuucgugccaacggcacucguacacganuuguucggucacugagcacaacguuacaccgunuuguuaggaaagugaaggugcucugaaaaggggcaacagagaaccugggaugauauuccaaaaagaauugcaugugggac ......................<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<......<<.....>>....>>>>>....<<<...<<<<<..<<<<<<<......>>>>>.>>....>>>>>.<<<...<<<<<<<<<<<<<<......<<<......<<<<.......>>>>........<<........>>......>>>.<<.......((.....>>))......>>>>>...>>>>..>>>>>.>>>..........<<<<<<<........>>>>>>>......<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................<<<..<<<<<<.<<<<<..<<.<<<<.(<<<<<<<<<<<<<<<.....<<<.<<<<<.......>>>>>.>>>.....>>>>>>....>>>>>>..>>>..............<<<<....<<<<..<<.<.<..<....>..>>.>>..>>>>.>>>>....<<<<<..)>>>>>>....>>>>>>>>>>>..>>>.<<<<........>>>><<<<<<....<<<<<<<.<<<<<..<<<...<<<.........>>>.....>>>...<<....>>..<<<<<...>>>>>...<<.<<..<<<<....>>>>...>>.>>..<<<<<<<.....>>>>>>.>.....>>>>>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.......<<...<<<<<<....<<<....<<<..<.<<<..>>>.>..>>>..>.>>....>>>>>>...<..<....<<.<......>>>....>..>......>>..>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<(((......<<.<<<<........<...........<<<.<<<<<<<<<..>>>>>>>>>>>>..........))).>....>>>>>>...........>>>...>>>>>>><<<<.<<<<<...........>>>>>........>>>>>>>>>....>>>>>..<.<<<<<<<<........<<<<..<<<....>>>.>>>.>.....>>>>>>>>..>.....>>>>>>..............<<<<<<<..................>>>>>>>....................<<<<<....<<.....>>..>>>>>.....<..........<<.<<<<<......>>>>...............<<<...>>>......>.>>..........<<<<.........>>....>>.>............. ......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((((..((((..(.((((((......))))).).....))))).(((...((((.((((((((.(...(.((.......((((.......))))........((........)).......)))[[(...)..((.....]]))....)..))))...))))...)))).))).....)....(((((((........)))))))......(((((........)))))..)))....................................((....)).............(..((.(....).))............)......................((..((((((.(((((..((.((((.(((((((((.((((((.....(((.((((.........)))).))).....)))))).....)))))..))).).............(((....((((..((.(.(..(....)..)).))..)))).)))......[[[....))))))....)))))))))))..))..(((..........)))((((.(....((.((((.(((((..(((.(.(((.........)))....))))...((....))..((.((...)).))...((.((..((((....))))...)).))..((((((.(..)..))))).).....))))).)))).))..((.(...((((((.....((((((((((.((((...(((.(((....))).)))...).)))...(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).).(((((((((......((.(.((((((....(((.....(...(.(((..))).)...)...)).)....))))))...(..(....((.........))....)..).....))).)))))))).)...((((.((.((.....)).)).))))....(((......)))...(((((((...((([[[...(..((.((((........(...........(((.(((((((((..))))))))))))..........]]].)....)))))))..........)))...)))))))((((.(((((............]]].........)))))))))....))))).)(.((((((((.(......((((..(((....))).))).)...).))))))))..).....).))))..............(((((((..................)))))))....................(((((....((.....))..))))).....(......(...((.(..((......))..................(.....).......).))....).....((((.........))....)).)............. CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN; LSUa rRNA 8ova AA 1919 2.47 RF01960,RF02542,RF01959,RF00177 URS0002915680_5702 37985661 0003735 0005840 5702 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CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant; SSU rRNA 8ove BA 1579 2.6 RF02543 URS00029156E1_5702 37985661 0003735 0005840 5702 agaccugaguguggcaggaccacccgcuaaacuuaagcanauuacucagcggaggaaaagaaaacaaccgugauucucucagucagcggcgagcgaagagggauucaacucguugccgaaucgggucuuauaugaccucgaacuguggcauagggcuggugcaggcguggcggaauucaauugcaaagcaaacccguugcugaacauacaacccuucaugugnguauugagccaaagaaggugucagcccauuacagccacggagccuacgcgccuccucaagagaguagcacuguuugggaaugcagugucaagccggcagguauuugucugccaagguuaaauauagaguaggaagaccgauagcgaacaaguagcgugagcgaaaguuugaaaaguacuuuggaaagagagugacauagaaccugaaaucgugacaacgacaauggaaguaccuucauuucucggccagacccaaccucgccgcgcaauuuccuuccggggcuaacauccgguggguacugugcggguuucgaggucauggggugcgugagugggcggaauaaagggucggugguuguguucuuccuccuucccuguccgugcgucucgacgcuggcgauggaaauggggugcccccacccgucuugnnacncggaccaaggagunanacagacgcgcaagggaggaguauugugacaacuuuucucguacugaaagggaggugugauacacccguggcgugcgcaauuuguguuuuugcccaacaccgaccggcgugggcugcgcgcgagugugccunnuuggacccnanagguggugaacuaugccugaacaaggugaagcccggggaaaccccgguggaggccuguagcgaugcugncgugcaaaungcucguacgauuugggunucgnagcgaaagacucaucgaaccaccuaguagcugguucacgucgaaguuucccucaggauagcuggugcuuguuaagaaguauugugcgguaaagcaaaugauuagagggaccuauucucaaacuuuaaangugcaaacaacccagccuuaguuauaacaaggcuggguaauugaggcaccaagugggccuucuucgguaagcngagcaggcgaugcggaaugaaccgcuuagggauauguggcgucaaaacuugugggcucauunucgauacgugaaaaggguguugguggauauccaccggccccgaaaauggangacgcuuaagccccaugugcgugauugcccauuauuccuuuggugagggcggcuauaugugagaaaguguagcccucccgauguagacguggcgugggggugaggacgaagccgauggcgcgagccucggauggacccgccucuagugcanaunuugguuggcgunncaaagaucuaacggaauauuuuuaaaugcaacguuggauncuggagcggggaaggauuucgugccaacggcacucguacacganuuguucggucacugagcacaacguuacaccgunuuguuaggaaagaaaaggggcaacagagaaccugggaugauauuccaaaaagaauugcauguggg ......................<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<......<<.....>>....>>>>>....<<<...<<<<<..<<<<<<<......>>>>>.>>....>>>>>.<<<...<<<<<<<<<<<<<<......<<<......<<<<.......>>>>.......<<........>>......>>>.<<.......((.....>>))......>>>>>...>>>>..>>>>>.>>>..........<<<<<<<........>>>>>>>......<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................<<<..<<<<<<.<<<<<..<<.<<<<.(<<<<<<<<<<<<<<<.....<<<.<<<<<.......>>>>>.>>>....>>>>>>....>>>>>>..>>>..............<<<<....<<<<..<<.<<..<....>..>>.>>..>>>>.>>>>....<<<<<..)>>>>>>....>>>>>>>>>>>..>>>.<<<<........>>>><<<<<<....<<<<<<<.<<<<<..<<<...<<<.........>>>...>>>...<<....>>..<<<<<...>>>>>......<...<.<.......>.>....>.....<<<.<<......>>.>>.>.....>>>>>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.......<<.<.<<<<<<....<<<....<<<....<<<..>>>....>>>..>.>>....>>>>>>...<<<<<<<<<<.<<<..>>>>>>>>>>>>>.>>>..>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<(((......<<.<<<<........<...........<<<.<<<<<<<<<..>>>>>>>>>>>>..........))).>....>>>>>>...........>>>...>>>>>>><<<<.<<<<<..........>>>>>........>>>>>>>>>....>>>>>..<.<<<<<<<<........<<<<..<<<....>>>.>>>.>.....>>>>>>>>..>.....>>>>>>..............<<<<<<<..................>>>>>>>....................<<<<<....<<.....>>..>>>>>.....<..........<<.<<<<<......>>>>.................>.>>..........<<<<.........>>....>>.>........... ......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((((..((((..(.((((((......))))).).....))))).(((...((((.(.((((((.(...({((.......((((.......)))).......((........)).......)))[[(...)..((....}]]))....)..))))...)).)...)))).))).....)....(((((((........)))))))......(((((........)))))..)))....................................((....)).............(..((.(....).))............)......................((..((((((.(((((..((.((((.(((((((((.((((((.....(((.((((.........)))).)))....)))))).....)))))..))).).............(((....((((..((.((..(....)..)).))..)))).)))......[[[....))))))....)))))))))))..))..(((..........)))((((.(....((.((((.(((((..(((.(.(((.........)))..))))...((....))..((.((...)).))......(.....(.......)......).....(((.((......)).)).).....))))).)))).))..((.(...((((((.....((((((((((.((((...(((.(((....))).)))...).)))...(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).).(((((((((......((.(.((((((....(((.....(...(.(((..))).)...)...)).)....))))))...((((((((((.((....)))))))))))).))).)))))))).)...((((.((.((.....)).)).))))....(((......)))...(((((((...((([[[...(..((.((((........(...........(((.(((((((((..))))))))))))..........]]].)....)))))))..........)))...)))))))((((.(((((...........]]].........)))))))))....))))).)(.((((((((.(......((((..(((....))).))).)...).))))))))..).....).))))..............(((((((..................)))))))....................(((((....((.....))..))))).....(......(...((.(..((......))...................).))....).....((((.........))....)).)........... CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant; LUS_alpha rRNA 8ove BB 1109 2.6 RF02543 URS00029156B3_5702 37985661 0003735 0005840 5702 caacugcagaccguacucaucaccgcaucagguccccaagcaucgaaugcucugguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguaugucgcaaacugauuucugcccagugcucugaaugucaacgugacgagauucaccgacgcgcggguaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngauucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagaagacccunuugaguuugacnccagucuggcucugugcggcgacuuacguugcuucacuuaucgaaugaagagaccaaugguuguuuugcgcagucuucgggcugugcgccgucuaggcugacgcgugcggaacucugcgccaacgggguggaauucuccggagucuuguuucgagacaucugccagauggggaguuuggcugnggcggcauaucuguuacacgacaacgcaggnnuccuaaggcgagcucagugggaucucacguggaacacaagcguaaaugcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaacaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggcucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunguucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuggcuggagauugcgaguaaaagauuauccgcgcaaagcggaggcaguccguuuuuuucugggucugccguuggguggcaugugcuuggcgcu ......................<<......>>......<<<<<...>>>>>........<<<<....<<<<.<<<<.<<.........<.....<<<<<.....<..>......>>>>><<.<<<<<<<<<<<>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<.<..<<<....<<<<......>>>>....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<....>>>>>>.>>>...<<<<<.....<<<<....<<<......<<<<<<<......>>>>>>>>>>.....<..<...>..>...................<<<.<<..>>.>>>...>>>>...>>>>>.......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<..>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>.........<<<<<..............<<<<.......>>>>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<.<......>.>>>>..>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>...<<<...........>>>..........<..<.<.......>.>.>.... ......................((......))......((((.....))))........(.((.....(((.((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((()))))..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...((....((((......))))....)).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).)))))))..)).).........[...(.((......].)).)...(((((((..(((.((......((((.(((((...(((((.(((((((...(((.(((.((....)).))).)))....((((.....(((.....(((......(((((.(......).))))))))..(.....((.)).....)................(((..(..)..)))....)))...))))........)))))))..)))))..(((......[)).)(((((...........].)))))([((...(((((((.(.(((((())))))...).((][....))....))))))).(.(....(((((....{..)))))...))(((....))).))...].....((.((.(............((.(.......).))))).))....)}.....)))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(((((((.(......).))))..))).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).))))))).......................((((.....))))...((.............)).........(...(.(.......).)...).. CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant; LSUb rRNA 8ove BG 183 2.6 RF02543 URS00000EFF4F_5702 37985661 0003735 0005840 5702 gugagauugugaagggaucucgcaggcaucgugagggaaguaugggguaguacgagaggaacucccaugccgugccucugguuucuggaguuugucgaagggcaagugcuccgacgcuaucgcacggugguucucggcugaacgccucuaagccagaaaccagucccaagaccgggugcccgu <<<<<<<.........>>>>>>>.<<<<<<....<<<<.<<<<<<<<...............>>>>>>>><<<<<...<<<<....<<<<<<<<<......>>>>..>>>>>...>>>>..>>>>>.<<<<..<.<<<<...........>>>>.>..>>>>.>>>>.......>>>>>>... (.(((((.........))))).).(((((((...(((..(((((((......(....).....)))))))(((((...((((....((((((((((....)))))..)))))...))))..))))).((((....(((.............)))....))))..))).....).))))))... CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant; SrRNA 2 8ovj 1 1611 2.4 RF02543 38722744 0003735 0005840 347515 cagaccugaguguggcaggacuacccgccgaacuuaagcauauuacucagcggaggaaaagaaaacaaccgugauucucucagugagcggcgagcgaagagggaacgaacucguugccgaaucgggucuuacaaggccuugaguuguggcacgugugguuggugcaggaguggcgaaauucaagcgaaaagcaaacccguugcugaauacaacccuucaugugnguauugagccaaagaagguguuagcccauugagccauaaaccugagcgccucaugaacaagcgnguagcacuguuugggaaugcagugucaaguggcagguauuugucugccaaaguuaaauacagaguaggaagaccgauagcgaacaaguagcgugagcgaanguuugaaaagcacuuuggaaagagagugaaauagaaccugaagucgugacaaagacaauggaaguaccuccauuucaacggccagaaccagcccuacugcauuauccugucggggaucaaaauccggcgggcaacgaagugcaagaaugggucuuggugaaaugagcggaguauuugugcugcgcacggcggccgcacgcacugguuucuucuccgugaugcuccauguuggcgauggaaauggggugcccccacccgucuugnnacncggaccaaggagunanacagacgcgcaagggaggagauaugccaguacuucucucguacugaaagggagaugcaaaaugcaucuguggugugcacacgucaaauccguuugauuugcccaacaccgaccggcccuccguggguugcguuggagugugccngnuuggacccnanagguggugaacuaugccugaacaaggugaagcccggggaaacccagguggaggccuguagcgaugcugncgugcaaaucgcucguaugauuugggunucgnagcgaaagacucaucgaaccaccuaguagcugguucacaucgaaguuuccnucaggauagcuggugcuaguagaaguauugugcgguaaagcaaaugauuagaggcgaccuauucucaaacuuuaaangugcaaacaaaccggccuuagccaacugcaaggccggaaagaaaagaauuagaggcaccaagugggccuucuucgguaagcngagcaggcgaugcggaaugaaccgcuuagggauauguggcgucaaaacuuaugggcucauucucgauacgugaaaaggguugguggauccaccggccccgaaaauggangacgcuuaagcccaauuagugauugcccauuauuccuuugguaagggcggaaacaaaggagaaaguguagcccuuccgauguagauguggccuggagguuaggacgaagcuuauggcgugagccuaagauggaccggccucuagugcanaunuugguuggcgunncaaagaucuaacggagauauacucaacaugcaacguuggauacuggagcggggaaggauuucgugccaacggcacucguacacganuuguucggaaacugagcacaacguuauaucgunuuguuaggaaagugaaggaacugaaaaggggcaacagagaaccugggauuauauuccaaaaagaaauugcauguggg .......................<<<<<......<......>.......>>>>.>.........<<....>>..<<<<<<......<<.....>>....>>>>>>...<<<...<<<<<..<<<<<<<......>>>>>.>>....>>>>>..<<<<...<<<<<<<<.<<<<<......<<<......<<<<.......>>>>.....<<........>>......>>>.<<.......((.....>>)).....>>>>>...>>>..>>>>>.>>>>............<<<<<<<........>>>>>>>.....<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................<<<..<<<<<<.<<<<<...<<.<<<<.<<<<<<<<....<<<<<..<<<<<<<<<........>>>>>>>>>.....>>.>>>......>>>>..>>>>........<<<<<.....<.<<<<.<<.<<<<.>>>>...>>.>.>>>..>..>>>>>.....<<<<...>>>>>>....>>>>>>>>>>>..>>>.<<<<........>>>><<<<<<....<<<<<<<.<<<<<..<<<<..<<.<........>>>..>>>>...<<....>>..<<<<<.....>>>>>...<<<<<...<<.<<<<<<....>>>>>>.>>....>>>>><<<<<<<<<.....>>>>>>.>>>...>>>>>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.....<<...<<<<<<....<<<....<<<..<.<<<...>>>.>..>>>..>.>>....>>>>>>.....<<<<<<<<.<<.....>>>>>>>>>>...........>>...>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<(((......<..<<<<........<...........<<<<<<<<<<..>>>>>>>>>>...........))).>....>>>>.>.........>>>...>>>>>>><<<<.<<<<<..........>>>>.........>>>>>>>>>....>>>>>..<.<<<<<<<<........<<<<..<<<....>>>.>>>.>.....>>>>>>>>..>.....>>>>>>..............<<<<<<<....................>>>>>>>....................<<<<<....<<.....>>..>>>>>....<<..........<<.<<<<<......>>>>...............<<...>>......>.>>..........<<<<.........>>....>>.>>........... .......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((((..((((..((((((((......))))).))....)))))...(((...((((((((.(((((....({((.......((((.......)))).....((........)).......)))[[(...)..((....}]])).....)))))...)))..))))).)))........)....(((((((........))))))).....(((((........)))))..)))....................................((....)).............(..((.(....).))............)......................((..((((((.((((((..((.((((.((((((((....((.((..(((((.((..........)).))))).....))..))......))))..))))........(((((.....(.((((..(.((((.))))...)..).)))..)..))))).....[[[[...))))))..).)))))))))))..))..(((..........)))((((.(..(.(((((.(.(((((..(((...((.((......))))...)))...((....))..(((((.....)))))...(((((...((.(((((......))))).))....)))))(((((((((.....)))))).)))...))))).).)))))..((.(...((((((.....((((((((((.((((...(((.(((....))).)))...).)))...(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).).((((((((.....((.(.(.((((.....((....(((..(.(((...))).)..)))..))......)))).).....(((.((((.((.....)))))).)))..........)))...))))))).)...((((.((.((.....)).)).))))....(((......)))...((((((....((([[[...(..(..((((........(...........(((((((.((..)).)))))))...........]]].)....)))).))........)))....))))))((((.((((((.........]]]]...).....)))))))))....))))).)(.((((((((.(......((((..(((....))).))).)...).))))))))..).....).))))..............(((((((....................)))))))....................(((((....((.....))..)))))....((......(...((.(.(((......))).................(...).......).))....).....((((.........))....)).))........... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN; LSUa_rRNA_chain_1 8ovj 5 115 2.4 38722744 347515 uacgucccucuccaaacgagagaacaugcaugggcuggcaugagcggcaugcuucccgguggggcucgcgucccgaggcgcugaaccuugaggccugaaacaugcucagggacac ...<<<<<<<<<.......>>>>....<<<<<<<<.<<.....<<<................<<..<..>..>>....>>>....>>.....>>>.....>>>>>...>>>>>.. ...(((((((((.......))))....((((((((.((.....(((.............(..((..(..)..))..).)))....)).....))).....)))))...))))).. CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN; SR4_chain_5 8ovj 7 164 2.4 RF00002 38722744 0003735 0005840 347515 aacgugncgcgauggaugacuuggcuuccuauuucguugaagnacgcaguaaagugcgauaagugguaucaauuncagaacauucaauuaccgaaucuuugaacgcaaacggcgcaugggagaagcucgugucauccccgugcaugccauauucucngugucga .........................................<<<<<<.((.....>>>.....<<<<<......))............>>>>.>...>>>....<<.....>><<<<<<<....<<....>>....>>>>>>>..................... .........................................((((((.[[.....))).....(((((......]]............)))).)...)))....((.....))(((((((....((.().))....)))))))..................... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN; 5.8S_rRNA_chain_7 8ovj S1 1755 2.4 RF01960,RF02542,RF01959,RF00177 38722744 0003735 0005840 347515 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN; SSU_rRNA_chain_S1 8ovj 2 1105 2.4 RF02543 38722744 0003735 0005840 347515 ccaacugcagaccguacucaucaccgcaucagguccccaagcauagaaugcucngguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaaaaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguauaucgcaaacugauuucugccnagugcucugaaugucaacgugacgagauucaccgacgcgcggguaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngnuucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagaagacccunuugaguuugacnccagucuggcucugugcggcgacauccguugcuucacuuaucgaaugaagagaccaauggguugcguagucuucgggcuaugcaccgucuagguuguggguacccaaccgugcuguaaacugaaccaacgggaguuccggagucuuguuucgagacaucugccagauggggaguuuggcugnggcggcauaucuguuacacgacaacgcaggnnuccuaaggcgagcucagugggaacagaucucacguagaacacaagcguaaaagcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaauaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunnuucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuagcuggaaauugcgagaaaaagauuauccgugcaaagcggacguggcgagcgguggguaguacaugguacgcucaucacc .......................<<......>>......<<<<<...>>>>>........<<<<....<<<<.<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<...>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<....<<<<......>>>>....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<....>>>>>>.>>>...<<<<<.....<<<<....<<...<<<<<<<<<..>>>>>>>>>.>>.....<<<............>>>...................<<<<...>>>>..>>>>...>>>>>.......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.....>>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>.........<<<<<..............<<<<.......>>>>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<.<......>.>>>>..>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>.<<<.>>>.<.<<<<<<<.<<<<...>>>>>>>>>>>.>. .......................((......))......((((.....))))........(.((.....(((.((.(.((..(....(.......(((((....(.[..).....)))))((.((((((((.((...)).))..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....((....(((........)))....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).).)))))..)).).........[..((.((......].)).))..(((((((..(((.((......((((.(((((...(((((.(((((((...(((.((((((....)))))).)))...(((((.....((((....(....((((((((....))))))))..)..(..(((............)))..)................(((.(.).)))..))))...))))).......)))))))..)))))..(((......[)).)(((.(...........].).)))([((...(((((((.(.((((((.....))))))...).((][..[.))....))))))).(.(....(((((....{..)))))...))(((....))).)).].].....((.((.(............((((.......))))))).))....)}.....)))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(((((((.(......).))))..)))..((.(.....).))......)))))..)...))).)......((((((....))).))).....))..))).)))))))........................(((.....)))..((...)).(.(((((((.((((...))))))))))).). CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN; LSUb_rRNA_chain_2 8p16 2 1536 2.77 RF00177,RF01959,RF02542,RF01960 0003735 0005840 562 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaauucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggaucaccuccuua ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<..>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((.(..).))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....))))))).............))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. E167K RF2 on E. coli 70S release complex with UGG (Structure I); 16S rRNA 8p16 1 2899 2.77 RF02541 0003735 0005840 562 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<<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>..>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>..>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>.(<<...<<<<<<<...<<<<<<.......>>>>>>.....<<)..(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>>.....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>.....>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))..(((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).....(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{..((((.(((...(((.......)))...))).....(..(((......)))).))))....)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((((((..((((.(..........((((..(((.......(((((((....)))))))....)))............)))).).))))..))))))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E167K RF2 on E. coli 70S release complex with UGG (Structure I); 23S rRNA 8p17 2 1536 2.78 RF00177,RF01959,RF02542,RF01960 0003735 0005840 562 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaauucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggaucaccuccuua ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<..>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((.(..).))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. E167K RF2 on E. coli 70S release complex with UGG (Structure II); 16S RNA 8p17 1 2899 2.78 RF02541 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<<.<<....>>..>>>>>>..>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>..>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>.(<<...<<<<<<<...<<<<<<.......>>>>>>.....<<)..(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>>.....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>.....>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))..(((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).....(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{..((((.(((...(((.......)))...))).....(..(((......)))).))))....)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((((((..((((.(..........((((..(((.......(((((((....)))))))....)))............)))).).))))..))))))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E167K RF2 on E. coli 70S release complex with UGG (Structure II); 23S rRNA 8p18 2 1536 2.77 RF00177,RF01959,RF02542,RF01960 0003735 0005840 562 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaauucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggaucaccuccuua ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<..>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>...........<<<<<<<........>>>>>>>..........>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((.(..).))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....))))))).............))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. E167K RF2 on E. coli 70S release complex with UGG (Structure III); 16S rRNA 8p18 1 2899 2.77 RF02541 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<<...<<<<<<......>>>>>>.>...>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<<<<<.<<...<<<<.......>>>>...>>........<<<......>>>..>>>>>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<........<<<<<<.<<....>>..>>>>>>........>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<..<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>..>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>>.....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>.....>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{..((((.(((...(((.......)))...))).....(..(((......)))).))))....)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.((((((((((..((((.(..........((((..(((.......(((((((....)))))))....)))............)))).).))))..))))))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E167K RF2 on E. coli 70S release complex with UGG (Structure III); 23S rRNA 8p2f A 2844 2.44 RF02541 38902339 0003735 0005840 93061 uuaaguuauuaagggcgcacgguggaugccuuggcacuagaagccgaugaaggacguuacuaacgacgauaugcuuuggggagcuguaaguaagcuuugauccagagauuuccgaauggggaaacccagcaugaguuaugucauguuaucgauaugugaauacauagcauaucagaaggcacacccggagaacugaaacaucuuaguacccggaggaagagaaagaaaauucgauucccuuaguagcggcgagcgaaacgggaagagcccaaaccaacaagcuugcuuguugggguuguaggacacucuauacggaguuacaaaggacgacauuagacgaaucaucuggaaagaugaaucaaagaagguaauaauccuguagucgaaaauguugucucucuugaguggauccugaguacgacggagcacgugaaauuccgucggaaucugggaggaccaucuccuaaggcuaaauacucucuagugaccgauagugaaccaguaccgugagggaaaggugaaaagcaccccggaaggggagugaaauagaaccugaaaccgugugcuuacaaguagucagagcccguuaaugggugauggcgugccuuuuguagaaugaaccggcgaguuacgauuugaugcaagguuaagcaguaaauguggagccguagcgaaagcgagucugaauagggcguuuaguauuuggucguagacccgaaaccaggugaucuacccuuggucagguugaaguucagguaacacugaauggaggaccgaaccgacuuacgungaaaagugagcggaugaacugaggguagcggagaaauuccaaucgaaccuggagauagcugguucucuccgaaauagcuuuagggcuagccucaagugaugauuauuggagguagagcacuguuuggacgaggggccguuaccgaauucagacaaacuccgaaugccaauuaauuuaacuugggagucagaacaugggugauaagguccguguucgaaagggaaacagcccagaccaccagcuaaggucccaaaauauauguuaaguggaaaaggauguggcguugcccagacaacuaggauguuggcuuagaagcagccaucauuuaaagagugcguaauagcucacuagucgagugacacugcgccgaaaauguaccggggcuaaacauauuaccgaagcuguggauuguccuuuggacaaugguaggagagcguucuaagggcguugaagcaugaucguaaggacauguggagcgcuuagaagugagaaugccggugugaguagcgaaagacgggugagaaucccguccaccgauugacuaagguuuccagaggaaggcucguccgcucuggguuagucggguccuaagcugaggccgacaggcguaggcgauggauaacagguugauauuccuguaccaccuauaaucguuuuaaucgauggggggacgcaguaggauaggcgaagcgugcgauuggauugcacgucuaagcaguaaggcugaguauuaggcaaauccgguacucguuaaggcugagcugugauggggagaagacauugugucuucgagucguugauuucacacugccgagaaaagccucuagauagaaaauaggugcccguaccgcaaaccgacacagguagucaagaugagaauucuaaggugagcgagcgaacucucguuaaggaacucggcaaaaugaccccguaacuucgggagaaggggugcucuuuaggguuaacgcccagaagagccgcagugaauaggcccaagcgacuguuuaucaaaaacacaggucucugcuaaaccguaaggugauguauaggggcugacgccugcccggugcuggaagguuaagaggagugguuagcuucugcgaagcuacgaaucgaagccccaguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacccgcacgaaaggcguaacgauuugggcacugucucaacgagagacucggugaaaucauaguaccugugaagaugcagguuacccgcgacaggacggaaagaccccguggagcuuuacuguagccugauauugaaauucggcacagcuugcccuagcuguguuggcuuucuaacccgcaccacuuaucguggugggagacagugucaggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcucaaagguucccucagaaugguuggaaaucauucauagaguguaaaggcauaagggagcuugacugcgagaccuacaagucgagcagggucgaaagacggacuuagugauccggugguuccgcauggaagggccaucgcucaacggauaaaagcuaccccgngganaacaggcuuaucucccccaagaguucacaucgacggggagguuuggcaccucgnugucggcucaucgcauccuggggcuguagucggucccaaggguugggcuguucgcccauuaaagcgguacgcgagcuggguucagaacgucgugagacaguucggucccuauccgucgugggcguaggaaauuugagaggagcuguccuuaguacgagaggaccgggauggacauaccucugguguaccaguugucgugccaacggcauagcuggguagcuauguguggacgggauaagugcugaaagcaucuaagcaugaagccccccucaagaugagauuucccaacuucgguuauaagaucccucaaagaugaugagguuaauagguucgagguggaagcauggugacauguggagcugacgaauacuaaucgaucgaagacuuaau <<<<<<......<<<<<<<<<<<.....[[.(((<<<<<<<[[<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<......<<....>>.......>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..(((....<<<<<<<<....>>>>>>>>......<<<<<<<<<.....<<<<.......<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>.>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.)))..............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>.>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<..................>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<.<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>.>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<...>>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<..<<......<<<...<<<<....<<<<..<<<..<<<<<.<<<<<<...(((...>>>>>><<..<<<<<..<<<<<<<<<<..<<.....>>.>>>>>>.....>>>>..>>>>>...>>...<<<<<<.....>>>>>>...>>>>>...>>>...>>>>.........>>>>..>>>.>>..>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<....>.>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<<.<<<<....>>>>.>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<..<<...<<<<<..<<....>>...>>>>>...>>..>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<<.<<<<<<<<<<<......>>>>>>>>>>>.>>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<....>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. 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Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state; 23S ribosomal RNA 8p4v 1 3149 3.16 RF02540,RF02541,RF02543 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...........<<.<<<<<<...>>>>>>.>>.............<<<<<<.<<<<<<<<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>>>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<......>>>..................................<<<<<.<<<<<......<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<....<....>....>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>(><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<....<<<<<..<<<<<.......>>>>>>>>>>....>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>).<<<<.<<<<<.....>>>>>.>>>>....<<<..[...>>>...<<<<<<<..<<<<(((.....<<<<<<......<.....]....<<<.<<<<<<<<<<.......<<<<<..<....<<.........>>....>..........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>....>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<<<<<<........>>>>>>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<...............<<<<<...............>>>>><<.<<<<<<.<<<......>>>...>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<.<...<<.....<<<<....>>>>.....>>.>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<.......>>>>>>>>...<<<<<.....<<<<..<<<<<......>>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<<...............>>>>>>..<<<<<...<<<<....<<<<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.....................<<<<<<<<<.<<<....<<<<....<<<<<......>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((((((((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))))))....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((.....(((((((((((((((((((((((.......(((((((......((((((....)))))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).[((((........))))((((((....((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....(((((((((..((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))....))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((((((((((...(((.(((((((.....(((....(((..(.((((...((.(((.....))).)).)))).)..)))..)).).....)))))...((((..(((.(......))))..)))).....))))).)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((...(...((.........))...)...........(........)...)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((.(..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........((..............).)....))....))...(((((........)))))]]((((..(((((.(...((((....)))...(.<.((((((...((((.(((((((((.((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))).).).))))))).))))(...)....))))))...))....).))..))).)))).)))..)).....((......)).).)).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.{..).....)))))((.((((((((.(.(...)).))..)))))).))(...).......(((((((((.].((.........))...(((((((....((((.....))))......))))))).}.(((.(((..((((((.(...((.....((((....)))).....)).)))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).{..(((((.....]}.)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((.........)))))))....((((.....((((...((..........))............>...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((..((((....{..))))..))).(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..>.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..(....(..)......)..)))))...)))....)))).)))))).))))).. 80S yeast ribosome in complex with HaterumaimideQ; 25S ribosomal RNA 8p4v AR 3147 3.16 RF02540,RF02541,RF02543 URS000061F377_4932 0003735 0005840 4932 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80S yeast ribosome in complex with HaterumaimideQ; 25S ribosomal RNA 8p4v sR 1783 3.16 RF01960,RF02542,RF01959,RF00177 0003735 0005840 4932 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80S yeast ribosome in complex with HaterumaimideQ; 18S ribosomal RNA 8p7x 3 2893 3.03 RF02540,RF02541,RF02543,RF00002 39668257 0003735 0005840 272634 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Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells; 23S ribosomal RNA 8p7y 3 2893 3.7 RF02540,RF02541,RF02543,RF00002 39668257 0003735 0005840 272634 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<<<......<<<<.<<<<<<....{[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((....<<<<<......>>>>>......<<<<<<<<<.....<<...<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>..>>..>>>>>..>>>>.....<<<<<<<<<....>.>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>.............}....>>>>>>.>>>>.......<<<<..<<<<......>>>>..>>>>...<<<........>>>.<<<<<<....<<<<<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..<<<<<...>>>>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<.<<........>>.>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<....<<<<<<<<<<.....<<<....<<..<<<<<...<<<<<<.....>>>>>.>...>>>>>..>>..>>.>.....>>>>>>>>>>...>>>>>>.>>..<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((...<<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>>>>>...>>>>>>><<<<<<<....>>>>>>>....>>>>>>..<<<<<<<<<<......<<<<<.<<....>>.>>>>>...>>>>>>>>>>........>>>>>>.......<<...<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<<...<<<<..<<<<..<<<<<<<<<....(((...>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>....>>>>..>>>>>...>><..<<....<<....>>.....>>...>>>>>....>>>>...>>>>........>>>>>..>>.....>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<<...<<<<<<<<.<<...............<<<<<.....<..>......>>>>><<<<<<......>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<..<<..<<<<<<<.<<....>>..>>>>>>>..>>..>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<.<<<<.....>>>>.>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>>>>>>>>...........<<<<<........>>>>>..<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<.<<<.<<<....<<...........<<.....<<<.......<<<<<........>>>>>....>>>................>>..>>....>>>.>>>.>>...<<<..<<<<<.....>>>>>.>>>....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>>....<<<<<<<....<<<..<<<<<<<...............>>>>>>><<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>........>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit; 23S ribosomal RNA 8p8b 3 2893 2.9 RF02540,RF02541,RF02543,RF00002 39668257 0003735 0005840 272634 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Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells; 23S ribosomal RNA 8p8v 3 2893 8.7 RF02540,RF02541,RF02543,RF00002 39668257 0003735 0005840 272634 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Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S); 23S ribosomal RNA 8p8w 3 2893 8.7 RF02540,RF02541,RF02543,RF00002 39668257 0003735 0005840 272634 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Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S); 23S ribosomal RNA 8pk0 A 1423 3.03 RF02541 URS000291568E_9606 38042949 0003735 0005840 9606 gcuaaaccuagccccaaacccacuccaccuuacuaccagacaaccuuagccaaaccauuuacccaaauaaaguauaggcgauagaaauugaaaccuggcgcaauagauauaguaccgcaagggaaagaugaaaaauuauaaccaagcauaauauagcaaggacuaaccccuauaccuucugcauaaugaauuaacuagaaauaacuuugcaaggagagccaaagcuaagacccccgaaaccagacgagcuaccuaagaacagcuaaaagagcacacccgucuauguagcaaaauagugggaagauuuauagguagaggcgacaaaccuaccgagccuggugauagcugguuguccaagauagaaucuuaguucaacuuuaaauuugcccacagaacccucuaaauccccuuguaaauuuaacuguuaguccaaagaggcucuuuggacacuaggaaaaaaccuuguagagagaguaaaaaauuuaacacccauaguaggccuaaaagcagccaccaauuaagaaagcguucaagcucaacacaaaucccaaacauauaacugaacuccucacacccaauuggaccaaucuaucacccuauagaagaacuaauguuaguauaaguaacaugaaaacauucuccuccgcauaagccugcgucagauuaaaacacugaacugacaauuaacagcccaauaucuacaaucaaccaacaagucauuauuacccucacugucaacccaacacaggcaugcucauaaggaaagguuaaaaaaaguaaaaggaacucggcaaaucuuaccccgccuguuuaccaaaaacaucaccucuagcaucaccaguauuagaggcaccgccugcuauauauauauauauauauauauauauauauuggcuccacgaggguucagcugucucuuacuuuuaaccagugaaauugaccugcccgugaggcgggcauaacacagcaagacgagaagacccuauggagcuuuaauuuauuaaugcaaacagaaaccugcauuaaaaauuucgguuggggcgaccucggagcagaacccaaccuccgagcaguacaugcuaagacuucaccagucaaagcgaacacucaauugauccaauaacuugaccaacggaacaaguuacccuagggacgcaauccuauucuagaguccauaucaacaauaggguuuuggaucaggacaucccgauggugcagccgcuauuaaagguucguuuguucaacgauuaaaguccuacgugaucugaguucagaccggaguaauccaggucgguuucuaucuacuuucaaauuccucccuguacgaaaggacaagagaaauaaggccuacuucacaaagcgccuucccccguaaaugauaucaucucaacuuaguauacccaccccacccaagaacaggguu <<<.......<<<<.....................................<......>.........<.....<<.....>>....>........>>.>>.............<<....>>......................>>>...........<<<.......>>>...<.<........>.>.<<<<<<.........<<<.<<..<<....>>...>>.>>>...<<.<...<<<<.<.....<<<<<.<<<..<<<.....>>>...<<<..<<<<........>>>>.>>>....>>>.>>>>>...<<.......>>......>.>>>>......>.>>..<<<<<<....<<<<....>>>><<<.<<<<<<<<<<.....<<..........>>.....>>>>>>>>>>..>>>.<<<<<<<<<...>>>>>>>>>...<<<......>>>....<<<.<<<...<..............<....<<<.........>>>....>.......<<<......>>>........................>...>>>>>>........>>>>>>...<<<<<......>>>>>.........>>>>>><......<<..<<<....>>><<<<..<<<<........<<<<<..............>>>>>......<<<...<<<<.......................>>>>.......>>>.....<<......>>.>>>>.....>>>>..<<<<...<<<<<<<<.<<................<<<<<<..<<<.........>>>...<<<<<<.............>>>>>>....<<<...<<<<<<..>>>>>>.<<<<<<<..>>>>>>>.>>>....>>.>>>>........>>.>>>>>>>>>>>>.>>.....>.....<<<<<.....>>>>>.......<<..<<<........<<<<<.<<<<<<..<<<<<.<<<<<<<<..........>>>>>>>>>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<.....<<<..<<<<.....>>>>..>>>.....>>.........<<<....>>>............>>>>..>>>>>>>....<<<<<<<<<...<<.......>>...>>>>>>>>><<<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<.....>>>>>.....>>>>>..>...>>>>>.....<<<<<<<....>>>.>>>>........>>>.>>...<.<<<.<<<.................>>>.>>><<<<<...<<<....>>>.>>>>>......<<<................>>>...>.........<<<<.......>>>>. ((.....(..((((.....................................(...[..).........(.....((.]...))....)........)).)).............((....))....)..................)).........(.(((.......))).[.(.(........).).((((((.........(((.((..((....))...)).)))...((.(...((((.(.....(((((.((((.(((....[)))...(((..((((.......{)))).)))..).))).))))).(.((.......))...)..).))))......).))..((((((....((((....))))(((.((((((((((.....((..........)).....))))))))))..))).(((((((((...)))))))))...(((......)))....(((.(((...(................(..(((.........)))..)......(..(((......)))).......................)...))))))........))))))...(((((......))))).........))))))(......((..(((....)))(((...((((......(.(((((..............)))))......(((...((((...............(..)....)))).......))).)...((......)).))))......)))..((((....(((((((.((..(....(........((((((.].((.........))....((((((.............))))))....(((...((((((())))))).(((((((()))))))).)))....)).))))....)..))).))))))).)))).)).....)).{..(((((..]}.))))).......((..(((........(((((.((((((..(((((.((((((((..........)))))))))))))..((((.....))))((((...............))))(.((.....((...(((....[..)))...)).....)).........(((....))).....)].....))))..)))))))....(((((((((...((.......))...)))))))))(((((.((((((..((.(((((((....)))))))...)).(((((.....))))).....)))))..)...))))).....(.(.(((....)))..).)..}.....))).))...(.(((.(((......(....).....))).)))(((((...(((....))).)))))......(.(................).)...).........((((.......)))). human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7; 16S rRNA + pre-H68-71 segment 8qbt A 2841 2.2 RF02541 38503735 0003735 0005840 679895 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.<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<......>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<<<.....>>.>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<..............>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<......>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>.>.....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<.<<<<.............<<............<<<<<<<......>>>>>>>...................>>....>>>>.>>>>>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>.. 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E. coli ApdP-stalled ribosomal complex; 23S rRNA 8qbt i 1539 2.2 RF01959,RF00177,RF02542,RF01960 38503735 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccgcgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaugcaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucauggcccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgcccgucacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucguaacaagguaaccguaggggaaccugcgguuggaucaccuccu .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<<<....>>>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<.<<..<......>.>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.......<<<....>>>......>>>>...<.<<<<.......<.<<<<<<<.........>>>>>>>.>.........>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<...<<<<<<....>>>>>>....<<....>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((.(((......))).)).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....(((.((..(......))).))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..(((........(((....))).......)))..((..((.....(....(((((((.........))))))).....)......)).....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((...((((((....))))))....((....))..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... E. coli ApdP-stalled ribosomal complex; 16S rRNA 8qcq A 2745 2.3 RF02541 38503735 0003735 0005840 224308 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.....((.>>>.....<<<<<<<..<<<)).....>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...(((....<<<<<<<<....>>>>>>>>......<<<<<<<<.<<<<<<<<<.<<<.....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>>>>>>.>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>......>>>>>.>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<...<<<<<..>>>.>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<..>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<..>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<.<<<<<<......<<...<<<<....<<<<..<<<..<<<.<<<<<<<<...(((....>>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>...>>>>..>>>>>...>><..<<..>>...>>>>>>...>>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<....<<<<....>>>>...>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>..<<<<.<<<..<<<<<<<..<<<<..<<...<<<<<..<<....>>...>>>>>...>>..>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>...>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<...>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. 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B. subtilis ApdA-stalled ribosomal complex; 23S rRNA 8qhu S1 1847 2.72 RF01960,RF02542,RF01959,RF00177 0003735 0005840 347515 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; SSU_rRNA_chain_S1 8qhu 4 184 2.72 RF02543,RF02540,RF02541 0003735 0005840 347515 gugagauugugaagggaucucgcagguaucgugagggaaguaugggguaguacgagaggaacucccaugccgunccucuaguuucugggguuugucgaacggcaagugccccgaagccaucgcacggugguucucggcugaacgccucuaagccagaagccaaucccaagaccagaugcccacu <<<<<<<.........>>>>>>>.<<<<<<....<<<<.<<<<<<<<...............>>>>>>>><<<<<...<.<<....<<<<<<<<<......>>>>..>>>>>...>>.>..>>>>>.<<<<....<<<<...........>>>>....>>>>.>>>>.......>>>>>>.... (((((((.........))))))).(((((((...(((..(((((((......(....).....)))))))(((((...(.((....((((((((((....)))))..)))))...)).)..)))))...((....(((.............)))....))....))).....).)))))).... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; SR2_chain_4 8qhu 1 1646 2.72 RF02543,RF02540,RF02541 0003735 0005840 347515 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; RNA (1646-MER) 8qhu 3 178 2.72 347515 gugguaangcgaacacuugccagguaacaaaucaauccucccacggugagcuuucuuuucaccauaauccaccuugggccuuuuuaccgcguuguucggagcgggggcucaagauugaaaaaugcagcucuguacugucauugugaguucugcgcauuaaagcaaaaaccuggggugu <<......>>....<<<..<<<<<<.......<<...<<<.<<.<<<<<<.......>>>>>><...<<.<.<<<<<<<<<<<....<<.......>>....>>>>>>>>>>>.>.>>....>..<...........>...>>.>>>...>>...............>>>>>>>>>.. (((....)))....(((..((((((.......((...(((.((.((((((.......))))))(...((.(.(((((((((((....((.......))....))))))))))).).))....)..(...........)...)).)))...))...............))))))))).. CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; SR1_chain_3 8qhu 5 117 2.72 347515 uacgucccucuccaaacgagagaacaugcaugggcuggcaugagcggcugcuuuucggggggcucgcgucccgaggcgcugaaccuugaggccugaaauucaugcucagggacacua ...<<<<<<<<<.......>>>>....<<<<<<<<.<<.....<<<..<<.....>>...<<..<..>..>>....>>>....>>.....>>>.......>>>>>...>>>>>.... ...(((((((((.......)))).....(((((((.((.....(((...(.....).....(..(())..).....)))....)).....))).......))))....))))).... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; SR4_chain_5 8qhu 7 163 2.72 RF00002 0003735 0005840 347515 aacgugncgcgauggaugacuuggcuuccuauuucguugaagnacgcaguaaagugcgauaagugguaucaauuncagaaauucaauuaccgaaucuuugaacgcaaacggcgcaugggagaagcucgugucauccccgugcaugccauauucucngugucga .........................................<<<<<<<<<....>>>>.....(<<<<......>>...........>>>>.)...>>>....<<.....>><<<<<<<.<..<<....>>..>.>>>>>>>..................... ..........................................(((((.[[.....))).....(((((......]]...........)))).)...)).....((.....))(((((((....((.().))....)))))))..................... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; 5.8S_rRNA_chain_7 8qhu 2 1190 2.72 RF02543,RF02540,RF02541 0003735 0005840 347515 cccaacugcagaccguacucaucaccgcaucagguccccaagcauagaaugcucugguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaaaaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguauaucgcaaacugauuucugccnagugcucugaaugucaacgugacgagauucaccgacgcgcggguaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngnuucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagaagacccunuugaguuugacnccagucuggcucugugcggcgacaucugaggguaggguggaagcgcaagcgcaaaugaaauaccaccacucggaacguugcuucacuuaucgaaugaagagaccaauggguugcguagucuucgggcuaugcaccgucuagguuugggagugucccccuguggguacccaaccgugcuguaaacugaaccaacgggaucaguuccggagucuuguuucgagacaucugccagauggggaguuuggcugnggcggcauaucuguuacacgacaacgcaggnnuccuaaggcgagcucagugggaacagaaaucucacguagaacacaagcguaaaagcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaauaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunnuucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuagcuggaaauugcgagaaaaagauuauccgugcaaagcggacgucgggucguugggccuggcgagcgguggguaguacuugguacgcucaucacc ........................<<......>>......<<<<.....>>>>........<<<<....<<<<.<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<...>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<....<<<<......>>>>....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<.<<<.<<......................................>>.>>>..>>>>>>.>>>...<<<<<.....<<<<....<<...<<<<<<<<....>>>>>>>>.>>.....<<<<.<<.....<<.......>>...>>.>>>>...................<<<<<....>>>>>..>>>>...>>>>>.......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>........<<<<<<..............<<<<.......>>>>.>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>........<<<<.<<<<<<..<<<<<<<.<......>.>>>>..>>>.<<<.........>>>.....>>>>>..>...>>>.>.....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>.<<<<<<<<<....>>>>>>>>>.<.<<<<<<<.<<<<...>>>>>>>>>>>.>. ........................((......))......((.(.....).))........(.((.....(((.((.(.((..(....(.......(((((....(.[..).....)))))((.(((((((.(((...))).)..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....((....(((........)))....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).).)))))..)).).........[..((.((......].)).))..(((((((..(((.((......((((.(((((...(((((.((.((((...((..((((((.(((.((............((....))..................)).)))..))))))..))...(((((......(((....(....((((((((....))))))))..)..(..(((..((.....((..(..).))...))..)))..)................((((......))))..)))....))))).......)))).))..)))))..(((......[)).)(((.(...........].).)))([((...(((.(((.(.((((((.......))))))...).((][..[.))....))).))).(......(((.(.......).)))....)(((....))).)).].].....((.((.(............(((.........)))))).))....)......)))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(((((((.(......).))))..))).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).)))))))........................(((.....)))..(((.(((((....))))).))).(.(((((((.((((...))))))))))).). CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression; LSUb_rRNA_chain_2 8qie 1 1611 2.43 RF02543,RF02540,RF02541 0003735 0005840 347515 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......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((.(...(.(..((((((((......))))).))....)).)...((((...((((((((.(((((....(.((.......((((.......)))).....((........)).......)))[[(...)..((.....]])).....)))))...)))..))))).)))).......)....(((((((........)))))))......(((((........)))))...))....................................((....)).............(..((.(....).))............)......................((..(((((..(((((....(.((((.((((.(((....((((...(.(((.((..........)).))).)......).))).....)))...))))........((((......((((((..(.((.(.).))...)..).))).))...)))).....[[[[...))))).....))))).)))))..))..(((..........)))((((.(....(((((.(.(((((..(((..(((.((.(.)..)))))..)))...((....))..(((((.....)))))...(((((...((.(((((......))))).))....)))))(((((((((.....)))))).)))...))))).).)))))...(.(...((((((.....((((((((((..(((...(.(.(((....))).).)...).))....(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).)...((((((....(.(((....))).).((((((((.....((.(.(.((((....(((.....(.....(.(..).).....)...)).)....)))).).....(((.(((((.((.....))))))))))..........)))...))))))).)...((((.((.((.....)).)).))))....((........))...((((((....((([[[...(..(..((((........(...........(((((((.((...)).)))))))...........]]].)....)))).))........)))....))))))((((.(((((..........]]]].........)))))))))....))))).)(.((((.(((.(......((((..(((....))).))).)...).))).))))..).....).))))..............(((((((.......(.......)....)))))))....................(((((....((.....))..)))))....((......(...((.(.(((......))).................(...).......).))....).....((((.........))....)).))........... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4; LSUa_rRNA_chain_1 8qie 2 1159 2.43 RF02543,RF02540,RF02541 0003735 0005840 347515 ccaacugcagaccguacucaucaccgcaucagguccccaagcauagaaugcucngguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaaaaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguauaucgcaaacugauuucugccnagugcucugaaugucaacgugacgagauucaccgacgcgcggguaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngnuucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagaagacccunuugaguuugacnccagucuggcucugugcggcgacaucugaggguaggguggaagcgcaagcgcaaaugaaauaccaccacucggaacguugcuucacuuaucgaaugaagagaccaauggguugcguagucuucgggcuaugcaccgucuagguuugggaguccgucccccuguggguacccaaccgugcuguacugaaccaacgggauccggagucuuguuucgagacacugccagauggggaguuuggcugnggcggcauaucuguuacacgacaacgcaggnnuccuaaggcgagcucagugggaaucucacguagaacacaagcguaaaagcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaauaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunnuucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuagcuggaaauugcgagaaaaagauuauccgugcaaagcggaggcgagcgguggguaguacaugguacgcucaucacc .......................<<......>>......<<<<<...>>>>>........<<<<....<<<<.<<<<.<<...............<<<<<.....<..>......>>>>><<.<<<<<<<<<<<...>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<.....<<....<<<<......>>>>....>>..>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<.<<<.<<.............<....>...................>>.>>>..>>>>>>.>>>...<<<<<.....<<<<....<<...<<<<<<<<....>>>>>>>>.>>.....<<<<.<<.......<<.<...>.>>...>>.>>>>.................<<<<.>>>>..>>>>...>>>>>......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.>>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>.........<<<<<..............<<<<.......>>>>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<.<......>.>>>>..>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>......<.<<<<<<<.<<<<...>>>>>>>>>>>.>. .......................((......))......((.(.....).))........(.((.....(((.((.(.((..(....(........((((....(.[..).....)))).((.(((((((..((...))..)..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....((....(((........)))....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).).)))))..)).).........[..((.((......].)).))..(((((((..(((.((......((((.(((((...(((((.(((((((...((..((((((..((.((.........(..((....)).............)....)).))...))))))..))...(((((.....((((....(....((((((((....))))))))..)..(..((((.((.......((.(...).))...)).))))..)..............(((...)))..))))...)))))......)))))))..)))))..(((......[)).)(((.(...........].).)))([((...(((((((.(.((((((.))))))...).((][..[.))....))))))).(......(((.(.......).)))....)(((....))).)).].].....((.((.(............(((.........)))))).))....)......)))..))))))............(.((((((...((.......))...))))))...).............((((.((((((..((.((((.(......).))))...))..((.(.....).))......)))))..)...))).)......((((((....))).))).....))..))).)))))))........................(((.....))).......(.(((((((..(((...))).))))))).). CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4; LSUb_rRNA_chain_2 8qie 4 184 2.43 RF02543,RF02540,RF02541 0003735 0005840 347515 gugggauugugaagggaucucgcagguaucgugagggaaguaugggguaguacgagaggaacucccaugccgunccucuaguuucugggguuugucgaacggcaagugccccgaagccaucgcacggugguucucggcugaacgccucuaagccagaagccaaucccaagaccagaugcccacu <<<<<<<.........>>>>>>>.<<<<<<....<<<<.<<<<<<<<...............>>>>>>>><<<<<...<.<<....<<<<<<<<<......>>>>..>>>>>...>>.>..>>>>>.<<<<....<<<<...........>>>>....>>>>.>>>>.......>>>>>>.... (((.(((.........))).))).(((.(((...(((..((((.((......(....).....)).))))(((((...(.((....((((((((.(....).)))..)))))...)).)..)))))...((....((...............))....))....))).....).)).))).... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4; SR2_chain_4 8qie 7 164 2.43 RF00002 0003735 0005840 347515 aacgugncgcgauggaugacuuggcuuccuauuucguugaagnacgcaguaaagugcgauaagugguaucaauuncagaacauucaauuaccgaaucuuugaacgcaaacggcgcaugggagaagcugugucauccccgugcaugccauauucucngugucgaa .........................................<<<<<<<<<....>>>>.....(<<<<......>>............>>>>.)...>>>....<<.....>><<<<<<<.<<.<<...>>..>>>>>>>>>...................... .........................................((((((.[[.....))).....(((((......]]............)))).)...)))....((.....))(((((((...............)))))))...................... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4; 5.8S_rRNA_chain_7 8qie S1 1787 2.43 RF01960,RF02542,RF01959,RF00177 0003735 0005840 347515 gaucuggnugauucugcnaguagucauangcuuguuunaaggacuuagccaugcaugccucagaaucacugcagcaggaaucugcgcauggcucnuuaaaucagacguaaucugccgcaaaaaucuugcggccgcaaaauuggauaacuuggcgaaacgccaagcuaauacaugaaccaaccggguguucuccaugagacgcccagcgaaugaaugacaguaaaaccaaugccuucaguaacacccagcaguguugacucaauucauuccgugcgaaagccggcuuccggcgucuuuugacgaacaacugcccuaucagcuggugauggccguguaguggacugccauggcguugacgggagcgggggauuaggguucgauuccggagagggagccugagaaauagcuaccacuucuacggagggcagcaggcgcgcnaauugcccaaugucaaaacaaaacgaugaggcngcgaaaagaaauagaguugucuugucauuucaaugggggauauuuaaacccauccaauaucgaguaacaauuggangacaagucuggugccagcacccgcgguaauuccagcuccaaaagcguauauuaaugcugungcuguunaaggguucguaguugaacugugggcugugcagggcccuugcagcccgugaaaagaaacaagaaacacgggagugggucgcaugucaugcaugccagggggcguccgugauuuuacugugacuaaagaagcgugacuaaagcagucauuugacuugaauuagaaagcaugggauaacaaaggagcauuuuuaaaggauuggagauuauggagcugugcgacaaaugcuuuccucggugugguuuaaggaaugaaggaggguaguucgggggagaacguacuggggcgucagaggugaaauucuuagaccgcaccaagacgaacuacagcgaaggcauucuucaaggauaccuuccucaaucaagaaccaaaguguggagaucgaagaugauuagaaaccauuguaguccacacugcaaacgaugacacccaugaauuggggauaucuugaauauccucagcacguacgcgaaagcuuugagguuacagucucaggggggaguacguucgcaanagugaaacuuaaagaaauugacggaauggcaccacaagacguggagcgugcgguuuaauuugacnnaacacngggaacuuuaccagauccggacaggaugaggauugacagauugaguguucuuucucgauucccugaauggngnugcauggccgcuuauggucggugnagugauuuguuugguugauuccgucaacggacgagauccaagcugcccaguagaauucagaauugcccauaggauagcauucgggaauucuucucugcgggauuccuuuguaugcacaaggugaaauuuugggcaacagcangucngugaugcuccucaauguucugggcgacacgcnnacuacaaugucanugagaacaagaacgaaccuacuugaucaaaagaguggggaaaccccggaaucacauagacccacuugggaccgaggauugcaauuanuggucgcgcaacgagnaaugucucguaggcgcagcucaucanacugugccgauuacgucccugccauuuguacacaccgccngucguuguuuccgaugauggugcaauacaggugaucggacaggcgcccgaaaguucaccgauauuunuucaauagagnaagcaaaagucguaacaagguagcuguaggggnnccugcagcugggacauuu 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...((((..[..[[..))))((((.((((((...(((...((.....(((.(((..((....((....((((.))))...))[))......(((.......(((..((..((...((........(((((())))))....(.....(.((((.....)))).)......)...........(((.(.(((.....)))).))).(((((((.((.......{......{...............................)).)))))...))....(((((...)))))......))..))))..))).(.(....(((....(((((.((.......)).))))))))......).)..(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(..(....(.((.]........))..).).).)....)))....(((.((......)).))).....((((............))).....).........((((([[....(.(.((.....((..]])).......)).)))))))..))))))))))..[......((([[...(.((((...(((..(....(.........(..)........)..................(...............((((.......)))).............)....((.(((((.......((..((.......))................))......)))))...))........(..(...(.((.....}......}....)).)...)................(..)......)...)....(.(.(((..((...(((((.((...(((.(((...(..........)......))).)))...)).......((....))..)))))..)).)))..)...))))...))))....((((((....(...((((.........))))...).))))))......{...(((.((..((..((((((((.(.(.).).))))))))..))...((..]])).....))...].))))))).(((......((((....))))....)))...]]..]((((..(.(((((..((..(((((..((.(((((((.......(........)...........(((((.(.....(((......(..((.(.(........).).))....)..)))....((..(....(.((((((....(((.(.(((....)))....((......)).....).))).....((((.((((.....(((.(((.(.((...............)).)..))).))).....))))..(.((((.........))))....)..)))).....))).))).....)..).)).....).)))))...)).))))).)).(...(((((((.......(......((.((((........)))).))....)........))).).)))......(....((...(..........)...)).....)..)..))))).....(((.(((.........))).)))......))...))))).).)).))..(.(..((.(.((((((((..((.(((.(.(.(.(.(((((.(...(.((..)).)...).))))))..).).).))).))..))))))))..).))...)..)..(((((((((....)))))))))}........ CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4; SSU_rRNA_chain_S1 8qk7 2 1536 2.77 RF00177,RF01959,RF02542,RF01960 0003735 0005840 562 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaauucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggaucaccuccuua ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<..>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<....>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. ........((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((((..))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. E167K RF2 on E. coli 70S release complex with UAA; 16S rRNA 8qk7 1 2899 2.77 RF02540,RF02541,RF02543,RF00002 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagccaggauguuggcuuagaagcagccaucauuuaaagaaagcguaauagcucacuggucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauugagccuugauguguaggauaggugggaggcuuugaaguguggacgccagucugcauggagccgaccuugaaauaccacccuuuaauguuugauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu 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((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((.(((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))))))).)))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{..((((.(((...(((.......)))...))).....(..(((......)))).))))....)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((((.(...((((.(..........((((..(((.......(((((((....)))))))....)))............)))).).))))...).)))))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E167K RF2 on E. coli 70S release complex with UAA; 23S rRNA 8qoa a 2753 2.0 RF02541 38503753 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugaccccuaaucgggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>.>.....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ...(((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...((.((((.....))))..))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{........)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).)))))).... Structure of SecM-stalled Escherichia coli 70S ribosome; 23S rRNA 8qoa A 1513 2.0 RF01959,RF00177,RF02542,RF01960 38503753 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagaggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugcccuugaggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaugcaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucauggcccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgcccgucacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucguaacaagguaaccguaggggnnccugcgguuggaucaccuccu .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<...>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<..>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<<.....>>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<.....<<<<....>>>>......<<....>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<<..>>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>............ .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((.....((..(((...)))))....)))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....(.(((..))).).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((.......(((....)))......))))..((.(((((...(....((((((.(.......).)))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((.....((((....))))......((....))..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....(((..(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)...))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....(((((..((((...(....)..)))).)))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}........... Structure of SecM-stalled Escherichia coli 70S ribosome; 16S rRNA 8qoi L5 3773 1.9 RF02543 38844527 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcggcccggcggaucuuucccgcgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccucccggcgcgccggggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccgggggaggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnnacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggugcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgcccgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcgggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaagagacaugagagguguagaauaagugggaggcccccggcgcccccccgguguccccgcgaggggcccggggcgggguccgccggcccugcgggccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccuuacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggaaaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<...<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>...<<<<<<<<<<....<<.<<<<........<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>...>>>>..>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<..<.............<<<<.<<<............>>>>>>>........>.....>>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<<<<<..>>>>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<<<..........>>>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<.<<<<<.<<<<..<...........>...>>>>.>>>>>.>.>>>>>>>.>>>...>>>>..>>>>.>>..<<<<<<.<<.......>.>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<.<......>.>>>>>..<<<<<...<<<..<<<..[[...[[..>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<......................<<<.<<<<<<<<<...<<<....<<<..<.<<<<...<<.............>>.>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<...............................................<........>...........>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<............]]...]]............................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<...<<<<...<...>...>>>>..>......>>....>>>..<<<<<........>>>>>))<<<<....<<<<<...<<<<<<<....>>>>>>>...<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<..<............>.......>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<...............................<...>....<.....<..................>......>...................................................>>>>>>...<<<<<.....<<<<.........<.......>...................<<<<<<<<<<.......>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<..<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>.>>>>>><<<<<.<.............>....<<.<<<<<<<.<<.....<<<<....<<<<<......>>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((...((((((((((.....)))))).)))).....)))....(((((((((.....((.((((........((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))...))).).))...)))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..(((...(........(....((((.((..............)))))).)......)......))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((.......((((((....))))))........))))..))))........))))))..)))))))))))....................((((((..(((((.....(....)...)))))..((((((.((((.(((((((((((.(((((.(((....................))).))))).).))))))).)))...))))..)))).))...(((((.(..........))))).)...[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((..(.(((((((((((((..(((..(((((........))))..)..)))...((....))...((((((........))))))..(((((...(((..(((..[.......[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((......................(((.((((((((.....((.....((.....(((......(..........)...))).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{..............................................................)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((...........]......]]..............(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..........(...(((....(...)....)))..).......)....))...(((((........)))))]]((((....(((((...((.((((....)))).))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....(((((((.......))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.(((...((..(....(.......(((((....(.[..).....)))))((.(((((((((((...(.(.......))........)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......((.(....).))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))...))).)...)))))....)).[..((.((.....>].)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.(((((..............................................................................................................................)))))...(((((.....((((.....................................((((((((((.......))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...a.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....}.......))))...))))..)))...).).)).).....((((((...(..((((.(..(((........(((((.((((....)))).))))).......)))...(((...(((....((((.(((((((......)))))))))))...)))...)))...........)..))))..)..))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA; 28S rRNA (3773-MER) 8qoi L7 120 1.9 RF00001 38844527 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA; 5S rRNA (120-MER) 8qoi L8 156 1.9 RF00002,RF02540 38844527 0003735 0005840 9606 cgacucuuagcggnggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))(((((((((.....))))))))).................... Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA; 5.8S rRNA (156-MER) 8qoi S2 1740 1.9 RF01960,RF02542,RF01959,RF00177 38844527 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucgcuccucucccacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucngcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcgguaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggagcgggcguccccgcccucucggccggggcccgaagcguuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcncggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuanagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccggggucggcccacggcccuggcggagcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<..................<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<........>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<..<<.<<..<<....>>..>>..>>...>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.......................<<................>>...<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<.<<<...............>>>.>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>....>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<....<.....................>......>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....(.....((..........))....)[))......(((.......(((.(.(..((....(((.....((.............((.....((.(((.....))).))......))......)).((((...((((........))))...))))((..((.((...(......)..)).))......)).(.((((.((((......)))))))))...)))...))).).))).(((....((.....(((((((.........))))))).))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........((..((.((..((....))..))..))...))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([....(.(.((...(.(..(.......................((................))...(..(((.(........(..((.......)).(((.......)))....).......).)))....)........(.((.(.(.((.................)).).).)).)....)....(((..(...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((..((..(.((((((.((((......)))))))))).)..))....((...]))...))...].))))).).(((.......(.(....).).....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((.....(..((.((..........)).))....).)))))...((.(((...(.((((((....((..((.((....))...(.((......)))...))..))....(((...(...((.(..((((((((((((.......)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...(..(((........(.......(((.((((....)))).)))....).........)))..)......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...((.((....(.(...............)...)......)).))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA; 18S rRNA (1740-MER) 8qrk A 955 6.69 RF00177 URS0001A24B4C_9606 38969660 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<...<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<.......>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<......>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>...>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1; 12S mitochondrial rRNA 8qrl A 951 3.34 RF00177 URS0001A24B4C_9606 38969660 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacg ...((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<....<<<.<<<..<......>......<<.......<<<<.<..<<<.....>>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<<....>>>.....>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<....<<.....>>...>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>..... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.(((((((...(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))...)))))))))).))..(.(..((.(...((((((..(((((..(...(((....((.....))...)))....)..))))).))))))....).))...)..)..(((((((((....)))))))))}.... mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2; 12S mitochondrial rRNA 8qrm A 955 3.05 RF00177 URS0001A24B4C_9606 38969660 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<...<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<.......>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<......>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>...>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<....<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>....>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.((((((....(((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)))....))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3; 12S mitochondrial rRNA 8qrn A 955 2.98 RF00177 URS0001A24B4C_9606 38969660 0003735 0005840 9606 aauagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugcaagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaagggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagccacacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaaguuuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccaccgcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuuuagaucacccccuccccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaauagcuaagacccaaacuggganuagauaccccacuaugcuuagcccuaaaccucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcgcaaguacccacguaaagacguuaggucaagguguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaaacuacgauagcccuuaugaaacuuaagggucgaagguggauuuagcaguaaacugagaguagagugcuuaguugaacagggcccugaagcgcguacacaccgncngucacccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagacaagucguaacaugguaaguguacuggnnagugcacuuggacgaacc ...((((..<<<<<<.)))).<<<<<<.<...<<<<<<<<..<.<<<.<<<..<......>......<<.......<<<<.<..<<.......>>.>..>>>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.>>.<<......>>.....>>>>>>>........<<<....<<<<....>>>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>)).......)))..>>>>>...>.>>>>>>....<<<((.....<<<<..<<<<...............<<<<<<......<<<.<<<.<<<......>>>..>>>.>>>.............<<....>>.>>>>>>.....>>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>>>.....>>..>>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<<<<<<<<<.....<<........>>..........<<<<<<<.......<<.<<<..<<<<<<.......<<..<<<<<.....>>>.......>>..>>.....<<<....>>>.........>>>...>>>>>>>>....>>>>>>>..>>.>>>>>>>>.....<<<<.....>>>>.....<....<<<<<<<.......>>>>>>>....>.....>>>>>.....<<<<<<<.........>>>>>>>.....>>>...>>>>>>>>>>.>>....<..<<.<...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>.......>>>>>.>>>>>>....>.>>...>.....<<<<<<<<<....>>>>>>>>>......... .[.[[[[..(((((..]]]]]((((((.((..((((((((..(.(((.(((..(......)......(((......((((.(..(((.....))).)..))))..((((....((..((((....))).)))......)))).((...))))).(((....))).....)))))))......(.(((...(((((....)))).))))).)).)))))).....((((([[[.....(((.....((.]]])).......)))..)))))..)).))))))....((([[...(.((((...(((...............(((((((.....(((.(((.((........))..))).))).....).....(.((....))))))))).....)))....))))....((((((...((...((((.........))))...))))))))......{...(.(((((......]]..))))).))))).((.......((((....)))).....))...)))))(((((.((((((.....((.(((((..((((((((((.....((........))..........(((((((.......((.(((...((((((.(....((..(((((.....))).......))..)).....(((....))).....).).)))...)).)))))....)))))))..)).)))))))).(...((((.....)))).....(....(((((((.......)))))))....)..)..))))).....(((((((.........))))))).....)).....))))))))).))..(.(..((.(...((((((..(((((..((..(((....((.....))...)))..).)..))))).))))))....).))...)..)..(((((((((....)))))))))}........ mt-SSU in GTPBP8 knock-out cells, state 4; 12S mitochondrial rRNA 8qyx A2 3706 1.78 RF02540,RF02543,RF02541 39658079 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgcucguggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcggcccggcggaucuuucccgcgcgggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccucccggcgggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccgggggaggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnnacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacgcccgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgaucucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccanuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccugccgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagcggcggccggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccuccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggaguggcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccncggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugaagaaauucaaugaagcgcggnuaaacggcgggaguaacuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaagagacaugagagguguagaauaagugggaggccccgccggugaaauaccacuacucugaucguuuuuucacugacccggugaggcgggggggcgagccccgaggggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguaauccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccggugcggagugcccuucguccugggaaacggggcgcggccggagaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<<...>>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<...<<<<....<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>>>>>..>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<<....>>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<..<....<<....<<<<.<<<...<<....>>.>>>>>>>>>...>..>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<.<..<<<<......<<<<<<<<..>>>>>>>>.......>>>>.>.>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<<......>>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<.<...........>..>>>>>>>>>>>.>>>>>>>>>.>>>...>>>>..>>>>.>>..<<<<<<<...........>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<...<<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<......>>>>>>>..<<<<<...<<<..<<<..(((...(((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<......................<<<.<<<<<<<<<...<<<....<<<..<.<<<..<..<.............>..>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<..........<..<<.....................>>........................>.....>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))...)))...........................>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<...........>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<....<<<<<..<<<<<<<......>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<<...<..........>........>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<...............>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<......<...........................................>....>..>>>.>>>>>...<<<<<.....<<<<.....................................<<<<<<<<<<.......>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<....<<<<<.................>>>>>..<<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<.<...>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<.<.............>....<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....(((...((((...(((.((..((((....((((((((..({((((......)))))....[[(...).(((....}]])))...).))))))))))).)).)))..))))...)))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((.......((((.((......(((((((((((..(((((((..(....((....((((.(((............)))))))))...)..))))...)))))))))))))).......)).))).).......(((((((((((((((((((((((...((..(((....((((......(.(((((....))))).).......))))...)))........))))))..)))))))))))....................((((((.(((((((......))))))).((((((.((((.((((((((((.(((((..((((..................))))..)))).).))))))).)))...))))..)))).))..((((.(.((.......).)).)).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((....(((((((((((((..(((..(((((........))))..)..)))...((....))...(((((.(......).)))))..(((((...(((..(((..[.[...[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((......................(((.((((((((.....((.....((.....((.....(.............)...)).....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....{.....(.................................(............)..)......)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((..........]]]...].]].............(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.(((((...(...)...))))))).......)....))...(((((........)))))]]((((....(((((...((((((......))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....(((((((.......))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....((((.....(.((((..((..(....(.......(((((....(.[..).....)))))((.(((((((((((...(.(.......))........)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....(......((((....))))......)..))))..)))))(((.............)))........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..)))).)..))))))....)).[..((.((.....>].)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.((((..((.(........................................................)))...))))...(((((.....((((.....................................((((((((((.......))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...a.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....}.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.(((.(...)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....((((.(..(((((......)))))..)))))....))....)))).))).))..))))).. Human 60S ribosomal subunit; 28S rRNA 8qyx C2 156 1.78 RF00002,RF02540 39658079 0003735 0005840 9606 cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacacauugaucaucgacacuucgaacgcacuugcggccccggguuccucccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>.............>>>..>...>>>....<<....>><<<<<<<<<.....>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]].............)))..)...)))....((....))((((((((.......)))))))).................... Human 60S ribosomal subunit; 5.8S rRNA 8r57 A 458 2.55 RF01960,RF02542,RF01959,RF00177 URS00029156AD_4565 38139282 0003735 0005840 4565 ggcaccaccaggcguggagccugcggcuuaauuugacucaacacggggaaacuuaccagguncagacauagcaagganugacagacugagagcucuuucuugauucnanggguggngnugcauggcnguucuuaguugguuaauuccguuaacgancgagancucagccugcuaacuagcuaugcggagccauccnuccgcagcuagcuncuuagagggacuaucgccguuuaggcgacggaaguuugaggcaauaacangucugugaugcccnuagauguucugggccgcacgcgcgcuacacugauguauucaacgaguauauagccuuggccgacaggcccggguaaucuugggaaauuucaucgugauggggauagaucauugcaauuguuggucuucaacgngnaaugccuaguaagcgcgagucaucagcucgcguugacuacgucccugcc <<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>..........<<<<<......<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<<<<<<<<....<<<<<......>>>.......>>....<<<<<.<<..<<<<..<<<<.<<<<<<<......>>>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>...>.>>>>>>>.......>>>>>....>.>>>>.>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>....>>........>.>>>>...........<<<<<<..........>>>>>>..........>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>> ((((..((..(((((..(((..(((((.......(........)...........(((((.(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((.((......))........))....(((((.((..((((..((((.(((((.(......).)))))...))))..)))).))..(..(((((.....))))).....)..)))))....))).))).....).))))).....).)))))...)).)))..))).(...((((.(.......((.......(((.((((....)))).)))....))........).))))......(....(((((............)))))....)..)..)))))......(((((.(.......).))))).......))...)))) CryoEM structure of wheat 40S ribosomal subunit, head domain; RNA (458-MER) 8r6c A 1519 2.2 RF00177,RF01959,RF02542,RF01960 URS000081169C_679895 38826346 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngaaccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<<<<<<<......>>>>>>.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<..<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>.........>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((((........))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.; 16S ribosomal RNA 8r6c a 2753 2.2 RF02541 38826346 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<....>>...>>>>>..>....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.; 23S ribosomal RNA 8r6f A 1177 2.34 RF01960,RF02542,RF01959,RF00177 URS00029156AD_4565 38139282 0003735 0005840 4565 uaccugguugauccugccaguagucaunugcuugucunaaagauuaagccaugcaugugcaaguaugaaccaaugaacugugaaacugcgaauggcucauuaaaucaguuauaguuuguungaugguauacucggauaaccguaguaauucuagngcuaanacgugcaacaaaccccgacuucugggaggggcgcauuuauuagaunaugauucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaaauuucugcccuaucaacuuucgaugguaggauaggggccuaccaugguggugacgggugacggagaauuaggguucgauuccggaganggagccugagaaacggcuaccacauncaaggnaggcagcagncgcgcnaauuacccaauccugacacggggaggungugacaauaaauaacaauaccggggucugguaauuggaaugaguacaaucuaaaucccuuaacgaggnuccauuggagggcaagucuggugccagcagccgcgguaauuccagcuccaauancguanauuuaaguugnugcaguunaaaagcucguaguuggaccuugggccgcgaccccguuacuuugaagaaauuagagugcucaaagcaagccaucgcucuggauacauungcaugggauaacaucauaggauuccgguccuagggaucggaguaaugauuaauagggacagucgggggcauucguauuucauagucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaagancgaaaguugggggcucgaagacgaucagauaccgnccuagucucaaccauaaacgaugccgaccagggaucggcggauguugcuuaggacuccgccggcaccuuaugagaaaucaaagucuuuggguuccggggggaguauggucgcaangcugaaacuuaaaggaauugacggaaguggugnagcgauuuguccuuuguacacaccgnccgucgcuccuaccgauugaaugguccggugaaguguucggaucgcggcgacggccgacgucgcgagaaguccauugaaccuuaucauuuagagganggagaagucguancaagguuucnguaggugnnccugcggaaggaucauug ...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<.........>>...>>.>>......<<........<<<..<<..<<....<<<<<.......<<.....<..<<<.....>>>..>......>>.........<<<<..<<...>>..>>>>.....<<<<<<............>>>>>>.........<<<<..<<<.>>>.>>>>..>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<.<.>.>>>>>.>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>..........<.<((.....<.<<...<<<.<.....<<<.<..>.>>>.<<<<<<.<<.......<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>.........<<<<<<<<<<.>>>>>>>>>>.......>....<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.<<.>>>>>>>>>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<....<<<....>>>...>>>>>>.>>....<..<<.<.<<<<<.<<.....<<<<<<..<<<..<<<<..<...<<<<<<...<<..>>...>>>>>>...>..>>>>..>>>..>>>>>>....>>.>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))...(..(((((.....(...((.....(((.(((..((....((....((.........))...))[))......(((.......(((...(..((....(((((...[...((.....(..(((.....)))..)......)).........((((..((...))..)))).(((.((..(....(......)..)..)).).).).(]((((..(((.))).))))).)))))...)))...))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)....).......(((((((((...)))))).)))....(.(((.(...........)).))......)..((((([[....(.((((.....((..]])).......))))))))))..))))).).....[......(.([[...(.(.((...(.(..(....(((.(..).))).(((.((.((........(..((.......)).(((....))).....).......)).))...)))........(((((((((((.))))))))))).....)....(((.(((.((...((((..(((.(((((((....((........)).......))))))).))).......((....))...))))..)).)))..))..)).)...)).)....((((((....(...((((.........))))...).))))))......{....((..(..((..((((((((.(((.(...))))))))))))..))...(((..]])))..)....].)).)).).(((......((((....))))....)))...]]].]((((..(((....((......))...))).)).))..(.(..((.(.(((((.((..(..((((.(..(((..((((..(...(((((((...(())...)))))))...)..))))..)))..).)))).)..)).)))))..).))...)..)..(((((((((....)))))))))}........ CryoEM structure of wheat 40S ribosomal subunit, body domain; RNA (1177-MER) 8r8m A 1519 2.4 RF00177,RF01959,RF02542,RF01960 URS000081169C_679895 38826346 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngaaccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<<....>>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<<....>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<...<<....>>..>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((((((((......)))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.; 16S ribosomal RNA 8ruh A 390 4.55 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((..(.((((((((((..((((.]......))))...)))).]]]]]]]...)))))).)..)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((........)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon; Domains 1-5 8rui A 390 3.31 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..(((((...[[[[[[[...)))))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[.((..(((.((((((((..((((.]......))))...)))).]]]]]]]...)))).)))..))....))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((.(....).)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking; Domains 1-5 8ruj A 390 3.12 RF02001,RF01998 URS000080DF32_182710 38898052 0000373 182710 ugugcccggcaugggugcagucuauagggugagagucccgaacugugaaggcagaaguaacaguuagccuaacgcaaggguguccguggcgacauggaaucugaaggaagcggacggcaaaccuucggucugaggaacacgaacuucauaugaggcuagguaucaauggaugaguuugcauaacaaaacaaaguccuuucugccaaaguugguacagaguaaaugaagcagauugaugaagggaaagacugcauucuuacccggggaggucuggaaacagaagucagcagaagucauaguacccuguucgcaggggaaggacggaacaaguauggcguucgcgccuaagcuugaaccgccguauaccgaacgguacguacgguggugugg ....<<<<<...<<<<<<<<<<<...<<<.......>>>..<<<<<...(((((((...>>>>>..<<<...<<<..<<<<.<<<<<<....>>>>>>>>>>.......>>>...>>>...<<<<<<<<<<<...........<<<<<......<<<..<<<<<<<<<<<<..<<<<........>>>>...>>>>.)))))))...>>>>>>>>..>>>...>>>>>>>>>>...>>>>>>...>>>>>>>>>>>....>>>>>....<<<<....>>>>...........<<<......<<<<<....>>>>>....>>>....<<<<<..<<<<....>>>>...>>>>>.<<<<<<<<<<<<<....>>>..>>>>>>>>>>.... .[<.((((({..(((((((((((...(((.......)))..(((.(...[[.[[[[...).)))..(((...(((..((((.((((((....))))))))))...>}..)))...)))...(((((((((((.(.....)...(((((.....[(((...((.((((((((..((((.]......))))...)))).]]]].]]...)))).))...)))...))))))))))...))))))...)))))))))))...])))))(...((((....))))...).......(((.(....(((.(....).)))...))))....(((((..((((....))))...))))).(((((((((((((....)))..)))))))))).... Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking; Domains 1-5 8rxh L1 1677 2.93 RF02543 38722744 0003735 0005840 347515 cagaccugaguguggcaggacuacccgccgaacuuaagcauauuacncagcggaggaaaagaaaacanccgugauucucucagugagcggcgagcgaagagggaacgaacucguugccgaaucgggucuuacaaggccuugaguuguggcacaaauaucauugugugguuggugcaggaguggcgaaauucaagcgaaaagcaaacccguugcugaauacaacccuucaugugnguauugagccaaagaagguguuagcccauugagccauaaaccugagcgccucaugaauaagcgnguagcacuguuugggaaugcagugucaaguuggcagguauuugucugccaaaguuaaauacagaguaggaagaccgauagcgaacaaguagcgugagcgaanguuugaaaagcacuuuggaaagagagugaaauagaaccugaagucgugacaaagacaauggaaguaccuccauuucaacggccagaaccagcccuacugcauuauccugucggggaucaaaauccggcgggcaacgaagugcaagaaucuugggucuuggugaaaugagcggaguauuugagcugcgcacggcgcgccgcacgcacugguuucuucuccgugaugcuccauguuggcgauggaaauggggugcccccacccgucuuganacncggaccaaggagunanacagacgcgcaagggaggagauaugguugccaguacuucucucguacugaaagggagaugcaaaaugcaucuguggugugcacacgucaaauccguuugauuugcccaacaccgaccggcccuccguggguugcguuggagugugccngnuuggacccnanagguggugaacuaugccugaacaaggugaagcccggggaaacccagguggaggccuguagcgaugcugncgugcaaaucgcucguaugauuugggunucgnagcgaaagacucaucgaaccaccuaguagcugguucacaucgaaguuuccnucaggauagcuggugcuaguagaaguauugugcgguaaagcaaaugauuagaggucgaccuauucucaaacuuuaaangugcaaacaaaccgugccuuagccaacugcaaggccggaaagaaaagaauuagaggcaccaagugggccuucuucgguaagcngagcaggcgaugcggaaugaaccgcuuagggauauguggcgucaaaacuuaugggcucauucucgauacgugaaaaggguguugguggauacaguuggacccaaccgaauccaccggccccgaaaauggangncgcuuaagcccaauuagugauugcccauuauuccuuugguaagggcggaaacaaauggagaaaguguagcccuuccgauguagauguggccuggagguuaggacgaagcuuauggcgugagccuaagauggaccggccucuagugcanaunuugguuggcgunncaaagaucuaacggagauauacucaacaugcaacguuggauacuggagcggggaaggauuucgugccaacggcacucguacacganuuguucggaaacugagcacaacguuauaucgunuuguuaggaaagugaaggugugucggcggagcuguucgacugugaaaaggggcaacagagaaccugggauuauauuccaaaaagaaauugcauguggga .......................<<<<<......<......>.......>>>>.>.........<<....>>..<<<<<<......<<.....>>....>>>>>>...<<<...<<<<<..<<<<<<<......>>>>>.>>....>>>>>............<<<<...<<<<<<<<.<<<<<......<<<......<<<<.......>>>>.....<<........>>......>>>.<<.......((.....>>)).....>>>>>...>>>..>>>>>.>>>>............<<<<<<<........>>>>>>>......<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................<<<..<<<<<<.<<<<<...<<.<<<<.<<<<<<<<....<<<<<..<<<<<<<<<........>>>>>>>>>.....>>.>>>.........>>>>..>>>>........<<<<<.....<<<<<..<<.<<<<..>>>>...>>...>>>.>>..>>>>>.....<<<<...>>>>>>....>>>>>>>>>>>..>>>.<<<<........>>>><<<<<<...<<<<<<<<.<<<<<..<<<..<<<.<............>>>>..>>>...<<....>>..<<<<<.....>>>>>...<<<<<...<<.<<<<<<....>>>>>>.>>....>>>>><<<<<<<<<.....>>>>>>.>>>...>>>>>.>>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.....<<...<<<<<<<...<<<....<<<....<<<....>>>....>>>..>.>>...>>>>>>>.....<<<.<<<<<.<<.....>>>>>>>>>>...........>>...>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<(((......<..<<<<........<...........<<<.<<<<<<<<<<..................>>>>>>>>>>>>>..........))).>....>>>>.>.........>>>...>>>>>>><<<<.<<<<<...........>>>>.........>>>>>>>>>....>>>>>....<<<<<<<<.........<<<..<<<....>>>.>>>.......>>>>>>>>........>>>>>>..............<<<<<<<....................>>>>>>>....................<<<<<....<<.....>>..>>>>>....<<..........<<.<<<<<......>>>>............<..<.<..<<.....<...>....>>..>.>..>...>.>>..........<<<<.........>>....>>.>>............ .......................(((((......(...[..).......)))).).........((....))...((((.......((.]...)).....))))....((.(...(.(..((((((((......))))).))....)).).............((((...((((((((.(((((....(.((.......((((.......)))).....((........)).......)))(((...).{[[.....))]].....)))))...)))..))))).)))).......)....((((.((........)).))))......(((((........)))))...))....................................((....)).............(..((.(....).))............)......................((..(((((..((((((..((.((((.((((.(((....((((...(.((((((..........)))))).)......).))).........)))...))))........(((((.....((((((..(.((.(..).))...)..).))).))..))))).....[[[[...))))))..).))))).)))))..))..(((..........)))(((..(....(((((.(.(((((..(((..(((..(....}.....).)))..)))...((....))..(((((.....)))))...((.((...((.(((((......))))).))....)).))(((((((((.....)))))).)))...))))).).)))))...(.(...((((((.....((((((((((..(((...(.(.(((....))).).)...).))....(((..((.((........)))).)))..).))))))))).(.((.......))...)..))))))......).)...((((((....(.(((....))).).((((((((.....((.(.((((((....(((....(((..(.(((....))).)..)))..)).)....)))))).....(((.(((((.((.....))))))))))..........)))...))))))).)...(((..((.((.....)).))..)))....(((......)))...(((((((...((([[[...(..(..((((........(...........(((.(((((.((((..................)))).))))))))..........]]].)....)))).))........)))...)))))))((((.((((((..........]]]]...).....)))))))))....))))).)(.((((.(((.(......((((..(((....))).))).)...).))).))))..).....)..)))..............(((((((....................)))))))....................(((((....((.....))..)))))....((......(...((.(.(((......))).............(........(..............)........)...).))....).....((((.........))....)).))............ CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; LSUa_rRNA_chain_1 8rxh L2 1155 2.93 RF02543 38722744 0003735 0005840 347515 cccaacugcagancguacucaucaccgcaucagguccccaagcauagaaugcucngguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaaaaaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguauaucgcaaacugauuucugccnagugcucugaaugucaacgugacgagauucaccgacgcgcggguaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngnuucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagnagacccunuugaguuugncnccagucuggcucugugcgncgacaucugaggcucggaacguugcuucacuuaucgaaugaagagaccaauggguuuagcguagucuucgggcuaugcaccgucuagguuugggaguccccuguggguacccaaccgugcuguaaacugaaccaacgggauugcaguuccggagucuuguuucgagacaucugccagauggggaguuuggcugnggcggcauaucuguuacacgncaacgcaggnnuccuaaggcgagcucagugggaacagaaaucucacguagaacacaagcguaaaagcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaauaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunnuucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuagcuggaaauugcgagaaaaagauuauccgugcaaagcggacgucgggucguugggccuggcgagcgguggguaguacaugguacgcucaucacc ........................<<......>>......<<<<.....>>>>........<<<<....<<<<.<<<<.<<.........<.....<<<<<.....<..>......>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<....<<<<......>>>>....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<.<<<.<<.>>.>>>..>>>>>>.>>>...<<<<<.....<<<<....<<.....<<<<<<<<....>>>>>>>>.>>.....<<<<.<<...<<.<..>.>>...>>.>>>>...................<<<<<......>>>>>..>>>>...>>>>>.......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>.........<<<<<..............<<<<.......>>>>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<<<<<<<.<......>.>>>>..>>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>.<<<<<<<<<....>>>>>>>>>.<.<<<<<<<.<<<<...>>>>>>>>>>>.>. ........................((......))......((((.....))))........(.((.....(((.((.(.((..(....(.......(((((....(.[..).....)))))((.(((((((..((....))..)..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....((....(((........)))....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).).)))))..)).).........[..((.((......].)).))..(((((((..(((.((......((((.(((((...(((((.(((((((...((..((((((..(..((.))..)...))))))..))...(((((.....((((....(......((((.(((....))).))))..)..(..((((.((....(.(..).)....)).))))..)................((((((....))))))..))))...))))).......)))))))..)))))..(((......[)).)(((.(...........].).)))([((...(((((((.(.((((((.......))))))...).((][..[.))....))))))).(......(((...........)))....)(((....))).)).].].....((.((.(............((...........))))).))....)......)))..))))))............(.((((((...((.......))...))))))...).............((((.((((((..((.((((.(......).))))...)).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).)))))))........................(((.....)))..(((((((((....))))))))).(.(((((((..(((...))).))))))).). CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; LSUb_rRNA_chain_2 8rxh L3 183 2.93 38722744 347515 agugguaangcgaaacacuugccagguaacaaaucaauccucccacggugagcuuucuuuucaccauaauccaccuugggccuuuuuacuuucgcguuguucggagcgggggcucaagauugaaaaaugcagcucuuacugucauuugugaguucugcgcauuaaagcaaaaaccuggggugu .<<<....>>>.....<<<..<<<<<<.......<<...<<<<...<<<<<<.......>>>>>><...<<.<.<<<<<<<<<<<.......<<.......>>....>>>>>>>>>>>.>.>>....><..<.<......>.>..>.>.>>>...>>...............>>>>>>>>>.. .(((....))).....(.(..((((((.......((...((((...((((((.......))))))(...((.(.(((.((.((((.......((.......))....)))).)).))).).))....)(..(..........)..).).)))...))...............))))))).).. CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; SR1_chain_3 8rxh L4 184 2.93 RF02543 38722744 0003735 0005840 347515 gugggauugugaagggaucucgcagguaucgugagggaaguaugggguaguacgagaggaacucccaugccgunccucuaguuucugggguuugucgaacggcaagugccccgaagccaucgcacggugguucucggcugaacgccucuaagccagaagccaaucccaagaccagaugcccacu <<<<<<<.........>>>>>>>.<<<<<<....<<<<.<<<<<<<<...............>>>>>>>><<<<<...<.<<....<<<<<<<<<......>>>>..>>>>>...>>.>..>>>>>.<<<<....<<<<...........>>>>....>>>>.>>>>.......>>>>>>.... (((.(((.........))).))).(((.(((...(((..(((((((......(....).....)))))))(((((...(.((....((((((((.(....).)))..)))))...)).)..))))).(.((....((...............))....)).)..))).....).)).))).... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; SR2_chain_4 8rxh L5 120 2.93 38722744 347515 uuacgucccucuccaaacgagagaacaugcaugggcuggcaugagcggcaugcuucuccgguggggcuccgucccgaggcgcugaaccuugaggccugaaaauucaugcucagggacacu ....<<<<<<<<<.......>>>>....<<<<<<<<.<<.....<<<.................<<.......>>....>>>....>>.....>>>........>>>>>...>>>>>... ....(((((((((.......)))).....((((.((.((.....(((..............(...(..(.)..)...).)))....)).....)).........))))....)))))... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; SR4_chain_5 8rxh L7 166 2.93 RF00002 38722744 0003735 0005840 347515 aacgugucgcgauggaugacuuggcuuccuauuucguugaagnacgcaguaaagugcgauaagugguaucaauuncagaaucauucaauuaccgaaucuuugaacgcaaacggcgcaugggagaagcucgugucauccccgugcaugccauauucucngugucgaa .........................................<<<<<<<<<....>>>>.....(<<<<......>>.............>>>>.)...>>>....<<.....>><<<<<<<.<..<<....>>..>.>>>>>>>...................... ...........................................((((.[[.....))).....(((((......]].............)))).)...)......((.....))(((((((....((.().))....)))))))...................... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; 5.8S_rRNA_chain_7 8rxh L8 120 2.93 RF00001 38722744 0003735 0005840 347515 gaguacgaccacacuugagugaaaacaccauaucccguccgauuugugaaguuaagcacucacaggcucaguuaguacugaggucagugaugacucgggaacccugagugccguacuccu <<<<<<<......<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<......<<<<<..<<....>>.>>>>>.....>>>>>>..>>>>>>>.. (((((((.(....((((((((.....((((((...(....)...))))..))....)))))).))((((((......(((((..((....)).))))).....))))))).))))))).. CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; 5S_rRNA_chain_8 8rxh S1 1844 2.93 RF01960,RF02542,RF01959,RF00177 38722744 0003735 0005840 347515 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN; SSU_rRNA_chain_S1 8rxx L1 1657 2.97 RF02543 38722744 0003735 0005840 347515 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......................<<<<<......<......>.......>>>>.>.........<<....>>..<<<<<<......<<.....>>....>>>>>>...<<<...<<<<<..<<<<<<<......>>>>>.>>....>>>>>............<<<<...<<<<<<<<.<<<<<......<<<......<<<<.......>>>>.....<<........>>......>>>.<<.......((.....>>)).....>>>>>...>>>..>>>>>.>>>>............<<<<<<<........>>>>>>>......<<<<<........>>>>>..>>>....................................<<....>>................<<<<....>>>>..................................<<<..<<<<<<.<<<<<...<<.<<<<.<<<<<<<<....<<<<<..<<<<<<<<<........>>>>>>>>>.....>>.>>>.........>>>>..>>>>........<<<<<.....<<<<<<.<<.<<<<.>>>>...>>.>.>>>.>>..>>>>>.....<<<<...>>>>>>....>>>>>>>>>>>..>>>.<<<<........>>>><<<<<<...<<<<<<<<.<<<<<..<<<..<<<.<............>>>>..>>>...<<....>>..<<<<<.....>>>>>...<<<<<...<<.<<<<<<....>>>>>>.>>....>>>>><<<<<<<<<.....>>>>>>.>>>...>>>>>.>>>>>>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<.<<<....>>>.>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>......>.>>...<<<<<....<.<<<....>>>.><<<<<<<<<.....<<...<<<<<<<...<<<....<<...<.<<<..>>>.>...>>..>>.>...>>>>>>>.....<<<.<<<<<.<<.....>>>>>>>>>>...........>>...>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>>>>..<<<<<<<...<<<(((......<..<<<<........<...........<<<.<<<<<<<<<<..>>>>>>>>>>>>>..........))).>....>>>>.>.........>>>...>>>>>>><<<<.<<<<<...........>>>>.........>>>>>>>>>....>>>>>....<<<<<<<<.........<<<..<<<....>>>.>>>.......>>>>>>>>........>>>>>>..............<<<<<<<....................>>>>>>>....................<<<<<....<<.....>>..>>>>>....<<..........<<.<<<<<......>>>>............<.......<<...<......>...>>.....>.....>.>>..........<<<<.........>>....>>.>>............ 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; LSUa_rRNA_chain_1 8rxx L2 1149 2.97 RF02543 38722744 0003735 0005840 347515 cccaacugcagancguacucaucaccgcaucagguccccaagcauagaaugcucugguacauagagaaangnacacucagggaagucggcaaanuagaugcguaaguucgcaagaagcauuggcucugagggcaaaaaauugccaacucagaacugnuuacggcggggaauccaacugunuaauuaaaacauagguuugugaugcauccaagugguguauaucgcaaacugauuucugccnagugcucuggucaacgugacgagauucaccgacgcgcggguaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucuuccaauuagagacgcgcaugaanggauuaaugngnuucccucugunccgaguuncuaucuagcgaancgacagucaagggaacggacuugnagggcuaagcggngaaagaagacccunuugaguuugncnccagucuggcucugugcgncgacaucugaggcucggaacguugcuucacuuaucgaaugaagagaccaauggguuuagcguagucuucgggcuaugcaccgucuagguuugggaguccccuguggguacccaaccgugcuguaaacugaaccaacgggaucaguuccggagucuuguuucgagacacugccagauggggaguuuggcugnggcggcauaucuguuacacgacaacgcaggnnuccuaaggcgagcucagugggaacagaaaucucacguagaacacaagcguaaaagcuugcuugauuaacgauuuccaguangaaucgagacugcgaaagcaaggccngcgauccuuugcgaagaauaggaaauaugaacaaaucauaccanangugucagaauaauuacnacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaaccuagcgccgcagaagacgcuaaggguuggaunnuucacccacugncagggaacgugngcuggguuuagancgucgugagacagguugguuunacccuacuuagcuggaaauugcgagaaaaagauuauccgugcaaagcggacgucgggucguugggccuggcgagcgguggguaguacaugguacncucaucacc ........................<<......>>......<<<<.....>>>>........<<<<....<<<<.<<<<.<<.........<.....<<<<<...............>>>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>..........<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<..<<....<<<<......>>>>....>>..>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>>.>>>>............<<<<<........>>>>>..<<<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<...<<<.<<<<<<.<<<.<<.>>.>>>..>>>>>>.>>>...<<<<<.....<<<<....<<.....<<<<<<<<....>>>>>>>>.>>.....<<<<.<<...<<.<..>.>>...>>.>>>>...................<<<<<....>>>>>..>>>>...>>>>>......>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<......>>....>>>>>>>...<<...<<<<<.......>>>>>..>>.<<<....>>>.>>........<<<<<<..............<<<<.......>>>>.>>>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<<<<<<<.<......>.>>>>>..>>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>>>.......................<<<<.....>>>>.<<<<<<<<<....>>>>>>>>>.<.<<<<<<<.<<<<...>>>>>>>>>>>.>. ........................((......))......((((.....))))........(.((.....(((.((.(.((..(....(.......(((((....(.[..).....)))))((.(((((((((((....)))))..)))))).))..........(((((((((...((.........))...(((((((....((((.....))))......))))))).].(.(.(((..((((((..((....(((........)))....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..))).).)))))..)).).........[..((.((......].)).))..(((((((..(((.((......((((.(((((...(((((.(((((((...((..((((((..(..((.))..)...))))))..))...(((((.....((((....((.....((((.(((....))).)))).))..(..((((.((...((.(..).))...)).))))..)................((((((..))))))..))))...)))))......)))))))..)))))..(((......[)).)(((.(...........].).)))([((...(((((((.(.((((((.......))))))...).((][..[.))....))))))).(......(((...........)))....)(((....))).)).].].....((.((.(............((...........))))).))....)......)))..))))))............(.((((((...((.......))...))))))...).............((((.((((((..((.((((.(......).))))...)).(((.(.....).))).....)))))..)...))).)......((((((....))).))).....))..))).)))))))........................(((.....)))..(((((((((....))))))))).(.(((((((..(((...))).))))))).). CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; LSUb_rRNA_chain_2 8rxx L3 183 2.97 38722744 347515 agugguaangcgaaacacuugccagguaacaaaucaauccucccacggugagcuuucuuuucaccauaauccaccuugggccuuuuuacuuucgcguuguucggagcgggggcucaagauugaaaaaugcagcucuuacugucauuugugaguucugcgcauuaaagcaaaaaccuggggugu .<<......>>.....<<<..<<<<<<.......<<...<<<....<<<<<<.......>>>>>><...<<.<.<<<<<<<<<<<.......<<.......>>....>>>>>>>>>>>.>.>>....><..<..........>..>...>>>...>>...............>>>>>>>>>.. .(((....))).....(((..((((((.......((...((((...((((((.......))))))(...((.(.(((((((((((.......((.......))....))))))))))).).))....)(..(..........)..).).)))...))...............))))))))).. CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; SR1_chain_3 8rxx L4 184 2.97 RF02543 38722744 0003735 0005840 347515 gugggauugugaagggaucucgcagguaucgugagggaaguaugggguaguacgagaggaacucccaugccgunccucuaguuucugggguuugucgaacggcaagugccccgaagccaucgcacggugguucucggcugaacgccucuaagccagaagccaaucccaagaccagaugcccacu <<<<<<<.........>>>>>>>.<<<<<<....<<<<.<<<<<<<<...............>>>>>>>><<<<<...<.<<....<<<<<<<<<......>>>>..>>>>>...>>.>..>>>>>.<<<<....<<<<...........>>>>....>>>>.>>>>.......>>>>>>.... (((.(((.........))).))).(((.(((...(((..(((((((......(....).....)))))))(((((...(.((....((((((((.(....).)))..)))))...)).)..))))).(((.....(((.............))).....)))..))).....).)).))).... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; SR2_chain_4 8rxx L5 122 2.97 38722744 347515 uuacgucccucuccaaacgagagaacaugcaugggcuggcaugagcggcaugcuucuccgguggggcucgacgucccgaggcgcugaaccuugaggccugaaaauucaugcucagggacacc ....<<<<<<<<<.......>>>>....<<<<<<<<.<<.....<<<.................<<..<<.>>..>>....>>>....>>.....>>>........>>>>>...>>>>>... ....(((((((((.......))))....((((((((.((.....(((..............(..((..((.))..))..).)))....)).....)))........)))))...)))))... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; SR4_chain_5 8rxx L7 166 2.97 RF00002 38722744 0003735 0005840 347515 aacgugucgcgauggaugacuuggcuuccuauuucguugaagnacgcaguaaagugcgauaagugguaucaauuncagaaucauucaauuaccgaaucuuugaacgcaaacggcgcaugggagaagcucgugucauccccgugcaugccauauucucngugucgaa .........................................<<<<<<<<<....>>>>.....(<<<<......>>.............>>>>.)...>>>....<<.....>><<<<<<<.<..<<....>>..>.>>>>>>>...................... ...........................................((((.[[.....))).....(((((......]].............)))).)...)......((.....))(((((((....((.().))....)))))))...................... CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; 5.8S_rRNA_chain_7 8rxx S1 1836 2.97 RF01960,RF02542,RF01959,RF00177 38722744 0003735 0005840 347515 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...<<<<<.{.[[[[>>>>><<<<.<<<<<<...<<<..........<<<.<<<..<<....<<....<<<<.>>>>...>>.>>......<<........<<<..<<..<<...<<.<<.....<<<<<..>>>>>...<<.....<<<<<<.....>>>>>>......>>..........<<<<<.<<<<.....>>>>>>>>>.<<<<<<<<<<.....(((((.((((<<...>>.........................>>>>>>>>...>>....<<<<<......>>>>>...>>.>>..>>>>..>>>.<<<....<<<....<<<<<.<<.......>>.>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<.<<<..........>>>.>>.<<<<....>>>>...>>>>>>.........<<<....<<<..........>>>..>>>.......>>>....<<<.<<.....>>.>>>.....<<<<............>>>.....>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>.........<<<[[.....<<<<...<<<.......<...<<....<..>...>>...>..................<...............<<<<.......>>>>.............>.....<<<<<<<<.......<<...<.......>..<<<....>>>.....>>......>>>>>..>>>...........<<..<<<<<<.<<.....>>.<...)))).)))))>.>>>>>>..>>.......<<<<<<<.<.<<...>>.>...>>>.>>>>............<<<<<..<<...<<<<<<<<<.<<<<.<<<...<<<......>>>......>>>.>>>.>>>>.......<<....>>.>>>>>>..>>.>>>.>>....>>>...>>>>...<<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>>.........<<<.<<..<<..<<<<<<<........<<..........>>.>>>>>>>..>>...<<..]]>>.....>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..]]]].}<<<<<.<<<<<<<..<<.<<<<<<..<<.<<<<<<<......<<........>>..........<<<<<.<....<<<<........<<.<<<........>>>.>>.......>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<<<.....<<<<<<<.<<<<.................>>>>....>>>>>>>.....>>>>....<<<<.<<......>>>>>>.......>>>>>....>>>.>>>.....>>>>>>>.....>.>>>>>...>>.>>>>>.>>.....<<<.<<<<......<........<<<<<<<........>>>>>>>....>.......>>>>...>>>...........<<<..<........>..>>>...........>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<<<<..<<.<<<.<.<<<<..<<<<<.....<.<<..>>.>.....>>>>>..>>>>.>.>>>.>>..>>>>>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>......... 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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN; SSU_rRNA_chain_S1 8s1p A 2733 1.96 RF02541 38811035 0003735 0005840 224308 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<..[..((.>>>.....<<<<<<<..<<<))..]..>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...(((....<<<<<<<<....>>>>>>>>......<<<<<<<<<....<<<<.......<<<<<<<<<<.<<<.....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>.>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....>>>>>.>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<..>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<...<<<..>.>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<<.....<....>.>>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<..>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>><......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<.<<<<<<......<<...<<<<....<<<<..<<<..<<<.<<<<<<<<...(((....>>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>...>>>>..>>>>>...>><..<..>...>>>>>>...>>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<...<<<<....>>>>...>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>..<<<<.<<<..<<<<<<<..<<<<..<<...<<<<<..<<....>>...>>>>>...>>..>>>>>>>>>..>>>>><<<<..>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>...>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.(...<<<<<.......)>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<.>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. ((((((......((((((((((.....(((..(((((((((((((......((((((.....[[[)))...].((((((...(((]].....)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...((((...(((((((((..)))))))))....{.(((((((((....((((.......((((((((((.(((...(.((((......)))))[[(...).(((.....]])))...)))...)))))))))))))).)))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((....(((((((.(((((..(((...(((.....)))...)))...((....))..((((.....))))....))))).)))))))..((.(...((((((.....((((((((((.((((...((()))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).]))))))......).))..((((((....(((((....)))))(((((((((...(((((((((.....(((...((((((((...(((()).))...))))))))..)).).....)))).)))))..))))))).))..(((((((.(........).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.......()...)))))))))).))...........]]].)...))))))))))...)))))))((((((()))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((.((((((......((...((((....((((..(((..(((.(((((((((...{{..).))))))((..(((((..(((((((((((.((.....)))))))))...))))..)))))...))(..(())...))))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((...((((....))))...)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))((((()))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.((((.(.).)))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((((....))))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...))))))). YlmH bound to PtRNA-50S; 23S rRNA 8s1u A 2789 3.4 RF02541 38811035 0003735 0005840 224308 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<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<..[..((.>>>.....<<<<<<<..<<<))..]..>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<......>>>>>>>.<<<<<<<<<.........>>>>>>>.>>.>>....<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<......<<.....>>.....>>>>...(((....<<<<<<<<....>>>>>>>>......<<<<<<<<<....<<<<.......<<<<<<<<<<.<<<.....<<<<......>>>>.((......<<<.....))>>>...>>>...>>>>>>>>>>>>>>.>>>>>..>>>>.....<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<....>>>>..................>>>>>>>>>>>.......<<<<..<<<<......>>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<.<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....>>>>>.>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<..>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<...<<<<<<<<<.....<<<...<<<<<<<<...<<<..>.>>...>>>>>>>>..>>.>.....>>>>.>>>>>..>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<...<<<<.......>>>>...>>.........<<......>>...>>>>>....>>>>>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<..>>>>>>....>>>>>>..<<<<<<<.<<......<<<<<.<<....>>.>>>>>...>>.>>>>>>>........>>>>>>.......<<....<<<<<<.......>>>>>><<<<....<<<<<.<<<..<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<.<<<<<<......<<...<<<<....<<<<..<<<..<<<.<<<<<<<<...(((....>>>>>><<..<<<<<..<<<<<<<<<<<.<<.....>>>>>>>>>...>>>>..>>>>>...>><..<..>...>>>>>>...>>>...>>>>.........>>>>..>>..>>>>>>>>>>>>>>>.>>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<...<<<<....>>>>...>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>..<<<<.<<<..<<<<<<<..<<<<..<<...<<<<<..<<....>>...>>>>>...>>..>>>>>>>>>..>>>>><<<<..>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>...>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.......(...<<<<<.......)>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<<.<<<.<<<<<<.>>>>>>.>>>....<<.<<<<<<.....>>>>>>>>.....>>>>>>>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>)))]......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<.)))>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<....>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>>>>>. ((((((......((((((((((.....(((..(((((((((((((......((((((.....[[[)))...].((((((...(((]].....)))......))))))...)))....(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....(...[..)......))))).).........((....))...((((......((.]...)).....))))...((((...(((((((((..)))))))))....{.(((((((((....((((.......((((((((((.(((...(.((((......)))))[[(...).(((.....]])))...)))...)))))))))))))).)))))..)))))....((((((((..[......))))))))....}.(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.((((..((((..[...))))..)))).<.(.(........).).((((((..(.(((((((.(((((..(((...(((.....)))...)))...((....))..((((.....))))....))))).)))))))..((.(...((((((.....((((((((((.((((...((()))...)<)))...(((.(((((.......A))))))))..).))))))))).(.(((....[)))...).]))))))......).))).((((((....(((((....)))))(((((((((...(((((((((.....(((...((((((((...(((()).))...))))))))..)).).....)))).)))))..))))))).))..(((((((.(........).)))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((.(((((.......(((((.(((...((.........))...))).....(...((......)).).)))))...))))).)))).))...........]]].)...))))))))))...)))))))((((((()))))))....))))))(.(((((((.((......(((((.((....))])))))...)).)))))))..).....))))))(......((....((((((.......))))))((((....(((...((..(((((((...((.....)).))))))....[[((((.((.(.(((...(((....)))...)))..)))...(((((........)))))]](((((.((((((......((...((((....((((..(((..(((.(((((((((...{{..).))))))((..(((((..(((((((((((.((.....)))))))))...))))..)))))...))(..(())...))))))...)))...))))(..).....))))..))..))))))))))))))).))).....((......))..))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.[..).....)))))(((((...((((....))))...)))))(...).......(((((((((.>.((.........))...(((((((.....(((....))).......))))))).]((((.(((..(((((((..(((...((...(((((..((....))...)))))...))...))))))))..)))))((((()))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).[..(((((.....>].)))))..((((((((.(((.((......((((.((((((..(((((.(((((((((.(((.((((.(.).)))).)))....((.((((((.....)))))))).....)))))))))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(((((((....))).))))..a.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))..)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((((....))))....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...))))))). YlmH bound to stalled 50S subunits with RqcH and PtRNA; 23S rRNA 8t2x B5 1782 2.46 RF01960,RF02542,RF01959,RF00177 0003735 0005840 4932 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...<<<<<.{.((((>>>>><<<<.<<<<<<...<.<...<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<..<<..<<....<<<..................<.....<<.<<.......>>.>>......>.........<<<<<............>>>>><...<<<<<<.......((.............................>>>>>>.....>...<<<<..<<<.....>>>.>>>>....>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<<<<<<....>>>>...>>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<.....>>>..>>>..>....>.>.....<<..<<....<.......>.....>>...>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>.........<<<[[.....<.<<...<<<.<<....<<<<<<.<<..................>>.>>>>>>.....<<<.<.........<...........>.........>.>>>....<<<<<.<<.......<<...<.......>..<<<.....>>>....>>......>>.>>..>>>.........<<.....<.<............)).....>.>....>>.....>>....<<<<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<........>>>>>>>>>>>..>>>...<<..]]>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>..)))).}<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<<<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<..<<..<<<<..<<<<<.<.<<<<<..>>>>>.>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>........>>>>....>>>.>>>...>.>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>......<....<<<<<<..........>>>>>>....>.....>>>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<<<....<.<.<<........>>.>.>....>>>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<....>>>>>>>>>........ ...((((..[.[[[..))))((((.((((((...(.(....(.....(((.(((..((....((....((..........))...)){))......(((.......(((...(..((....(((..................((....((.(((.....))).)).....)).........(((((............)))))(.(.(((.((......[.[.[.[.(.(....).).....(......).)).))).)...).(.((((...(((..).))..)))))...)))...)))...))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(..(....)..)...)))))).).....(.(((...((((.}...))).)))))......).).....(....(.....(......).....).....)....(.(.(.(...........))..)......)..((((([[....(.((((.....((..]])).......))))))))))..))))))))))..{......((({{...(.(.((...(.(.(.....((((((.((.(..............).)).))))))......((((.............(.....)...........)))).....(((((.((........(..((.......)).(((.....)))....).......)).))..))).........((.....(..(.......]..]].]...)..)....))......)...(((.(((..(...((((..((..((((((.....((........))........))))))..)).......((....))...))))..)..)))..))..)).)...)).)....((((((....(...((((.........))))...).))))))......<...(((.((.(((..((((((((.(((........)))))))))))..)))...((..}}))...))...}.))))))).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((.......(........)...........((((..(....(((((........((.(((........))).))......)))))...((.(((...(.((((((....((..((((......))..(.((......)))...))..))....((((..((..(((...(((((..(.((((..)))).)....)))))...))).))..(.((((((.....))))))....)...))))....))).))).....).))))).....)..))))...)).)))).))).(...(((((((......((.....((..((((....))))..))....)).......)))))))......(....((((((..........))))))....)..)..))))).....(.((((((.......)))))).)......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.((...(.((..(...((.(..(.(.((.((.(....).)).)).)..).).))...)..)).)...)).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))>....... Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE; 18S rRNA 8t2x A1 3216 2.46 RF02540,RF02541,RF02543 0003735 0005840 4932 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........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[...<.......<<.<<<<<<...>>>>>>.>>.......>.....<<<<<<.<<<<<<<<<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>>>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<.............<..>........<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<..........>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<....<<.<<<<<<<.....<<<....<<<..<.<<<<...............>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<....<<.........>>....>>......................>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>.........<<<<..........>>>>.....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<......<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<......>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>............>>.>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<...>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<.<..<<<.....<<<<....>>>>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<<<<<<<.............<<<......................>>>....>>>>>>.>>>>>>>>>>...<<<<<.....<<<<..<<<..........>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>..>>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<<...............>>>>>>..<<<<<...<<<<<...<<<<<<<<<<}}}.>>>>>..>>>>>..>>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<....<<<......>>>....>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<....<<<<<......>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((((...(((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..)))...))....)))))))))))...)....(((((((........))))))).....(((((..[[[.[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.(((((.........................(((((((((((((((((((((((.......(((((((......(((..........))).......))))))).....))))).))))))))))........(((....)))....)))))))).....))))).))))).[((((........))))((((((..(.((((((.((((((..(((..((((.......))))..)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)[)))...(((..((.((.......<)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((......(((....)))..(((.(.((((....((.(.(((.(......((.....((..(.((((...............)))).)..))...)).......).)))...((((.((((.(......))))).))))(..)..)))..)))).).).))..((((.((.((.....)).)).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(.(((.(.(...((.........))....)).....(...(........).).))).)...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....)))..........((............))......))....))...(((((........)))))]]((((..(((((.....((((....))).....<.((((((...((((.((((((((((((((((((...{{..))))))....(((((....(((((.....(((.....))).....))))).....))))).....(((((((......))))))))))).).))))))).))))(...)....))))))....).......)).))).)))).)))..)).....((......)).)))).((((.....))))..))))..(.(......((((((..((..(....(.......(((((....(.{..).....)))))((.(((((((((((...)))))..)))))).))(...).......(((((((.(.].((.........))...(((((((....((((.....))))......))))))).}.(.(.(((..((((((.....((.....((((....)))).....))..))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)..))))))).)..)))..))))))...).)))....)).{..(((((.....]}.)))))....(((((..(((.((......((((.(((((...(((((.((((((((..((.(((.((((((((...............((..(.(...))............))......))))).))).))).))....((((.....((((..((((........))))...........>...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....)))))))...(((...(((....{..)))...))).(((....))).))]]].].....((((((..((((.]].]]]))))))))))....)}.....)))..)))))).......(....(.((((((...((.......))...))))))...)....)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...>.))..))).)))))....((((((((..((((.(.(((.(......(....).....).))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..(((.((..)..).)))..)))))...)))....)))).)))))).))))).. Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE; 25S rRNA 8tjv A 409 2.99 RF00028,RF00028 URS0002915687_32630 37791881 0000372 32630 gggcgaugaggcccgcccaaacugcccuauauggaugcaguucacagacuaaaugucggucggggaagauguauucuucucauaagauauagucggaccucuccuuaaugggagcuagcggaugaagugaugcaacacuggagccgcugggaacuaauuuguaugcgaaaguauauugauuaguuuuggaaaguuaucaggcaugcaccugguagcuagucuuuaaaccaauagauugcaucgguuuaaaaggcaagaccgucaaauugcgggaaaggggucaacagccguucaguaccaagucucaggggaaacuuugagauggccuugcaaaggguaugguaauaagcugacggacaugguccuaaccacgcagccaaguccuaaguagggcugauggccucuacug .((((..<<<<<<))))......<<<<<<<..<<<<...<<.....<<<<<...{.(((((.<<<<<<<.....>>>>>>>........>>>>>...(..<<<<<....>>>>><<<<<<<.(..<<<<<<<<<<>>>>...)>>>>>>>.<<<<<<<<.<<<<<......>>>>>.>>>>>>>>...)..<<<<<<<<<<..[[[.>>>>>>>>>>.<<<<<<<<<<<......>>>>>>.>>>>>.>>>>>>..))))).}....<<<<<<...<<<<<<.....<<<.<<<<.<<...<<<<<<<<<....>>>>>>>>>..<<..]]]..>>.....>>......>>>>>>>....>>>>>>..>>.>>>>>>...>>>>...>>>>>>>....>>>>>>..... .[[[[..((((((]]]]......(((((((..((((...((...[.[[[[[...(.(((((.(((((((.....)))))))........]]]]]]..((.(((((....)))))(((((((....(((([[[[[[))))....))))))).(((((((...(((((....)))))...)))))))..))..((((((((((..{{{.)))))))))).(((((((((((....(.]]]]]]))))))).)))))..))))).)....((((((...((((((.....(((.((((.(((..(((((((((....)))))))))..((..}}.}.))....)))......)))))))....))))))..)).))))))...))))...)))))))....))))))..... Tetrahymena Ribozyme scaffolded Fluoride riboswitch; RNA (417-MER) 8u5j A 36 1.7 32630 guacgaaggaagguuugguaugugguagauucguac <<<<<<<......................>>>>>>> (((((((......................))))))) Structure of Mango III variant aptamer bound to T01-07M-B; Mango III variant 8u5k A 36 2.8 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II aptamer bound to T01-6A; Mango II 8u5k B 36 2.8 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II aptamer bound to T01-6A; Mango II 8u5k C 36 2.8 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II aptamer bound to T01-6A; Mango II 8u5p A 36 2.9 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II aptamer bound to T01-6A-B; Mango II 8u5p B 36 2.9 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II aptamer bound to T01-6A-B; Mango II 8u5p C 35 2.9 32630 gcguacgaaggagaggagaggaagaggagaguacg .<<<<<........................>>>>> .(((((........................))))) Structure of Mango II aptamer bound to T01-6A-B; Mango II 8u5r A 36 2.6 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A; Mango II variant 8u5r B 36 2.6 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A; Mango II variant 8u5r C 36 2.6 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A; Mango II variant 8u5t A 36 2.2 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A-B; Mango II variant 8u5t B 36 2.2 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A-B; Mango II variant 8u5t C 36 2.2 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-6A-B; Mango II variant 8u5z A 36 2.5 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-7M-B; Mango II variant 8u5z B 36 2.5 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-7M-B; Mango II variant 8u5z C 36 2.5 32630 gcguacgaaggugaggagaggcgaggaagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant aptamer bound to T01-7M-B; Mango II variant 8u60 A 36 3.3 32630 gcguacgaaggagaggagaggaugaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant2 aptamer bound to T01-6A; RNA Mango II variant 2 aptamer 8u60 B 36 3.3 32630 gcguacgaaggagaggagaggaugaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant2 aptamer bound to T01-6A; RNA Mango II variant 2 aptamer 8u60 C 36 3.3 32630 gcguacgaaggagaggagaggaugaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Structure of Mango II variant2 aptamer bound to T01-6A; RNA Mango II variant 2 aptamer 8ud6 1A 2871 2.7 RF02541 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........))..))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud6 1x 76 2.7 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8ud6 2A 2800 2.7 RF02541 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<<.<......>.>>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.....(............)......))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..((.......((((((((....))))))))....))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))((((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud6 2x 76 2.7 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8ud7 1A 2871 2.55 RF02541 URS00001698E8_300852 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.....(.>>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<.<<....>>.>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(..(((..........))..))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud7 1x 76 2.55 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8ud7 2A 2800 2.55 RF02541 URS00001698E8_300852 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..((............).).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud7 2x 76 2.55 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8ud8 1A 2871 2.6 RF02541 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((.(......).)..)))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((.....))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud8 1x 76 2.6 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8ud8 2A 2800 2.6 RF02541 38359125 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(..((............).).)..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(.(......((((((((....))))))))...).)............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; 23S Ribosomal RNA 8ud8 2x 76 2.6 RF00005 38359125 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution; P-site Aminoacyl-tRNA fMet-tRNAmet 8utg A 21 1.97 38926367 1968826 uauggaagaggcgguugguau ..................... .......(..........).. An RNA G-Quadruplex from the NS5 gene in the West Nile Virus Genome; RNA (5'-R(*UP*AP*UP*GP*GP*AP*AP*GP*AP*GP*GP*CP*GP*GP*UP*UP*GP*GP*UP*AP*U)-3') 8utg B 21 1.97 38926367 1968826 uauggaagaggcgguugguau ..................... .......(..........).. An RNA G-Quadruplex from the NS5 gene in the West Nile Virus Genome; RNA (5'-R(*UP*AP*UP*GP*GP*AP*AP*GP*AP*GP*GP*CP*GP*GP*UP*UP*GP*GP*UP*AP*U)-3') 8uvr 1A 2871 2.6 RF02541 38165935 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<..<<<<.......>>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<......>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution; 23S Ribosomal RNA 8uvr 1x 76 2.6 RF00005 38165935 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution; P-site Deacylated tRNAmet 8uvr 2A 2800 2.6 RF02541 38165935 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>..<....<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>>.<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.(((.....((............).).....))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution; 23S Ribosomal RNA 8uvr 2x 76 2.6 RF00005 38165935 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution; P-site Deacylated tRNAmet 8uvs 1A 2871 2.75 RF02541 38165935 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.......>>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<......>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> 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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution; 23S Ribosomal RNA 8uvs 1x 76 2.75 RF00005 38165935 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution; P-site Deacylated tRNAmet 8uvs 2A 2800 2.75 RF02541 38165935 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<...<<<............>.>>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<..>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(...............)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..((.......((((((((....))))))))....))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((...(((((.........))))).....((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))..(...)......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution; 23S Ribosomal RNA 8uvs 2x 76 2.75 RF00005 38165935 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution; P-site Deacylated tRNAmet 8vtu 1A 2871 2.4 RF02541 39039256 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<<.......>>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((..........)..))...))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((..((((((((.(.........(((((..(((.......(((((((....)))))))....)))............)))))).))))))))..))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8vtu 1x 77 2.4 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; Aminoacylated fMet-tRNAmet 8vtu 2A 2800 2.4 RF02541 39039256 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....((............).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((.))......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8vtu 2x 77 2.4 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; Aminoacylated fMet-tRNAmet 8vtv 1A 2871 2.55 RF02541 39039256 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<<<<....>>>>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<.>>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(..(((..........))..))..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..((((.))))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; 23S Ribosomal RNA 8vtv 1x 77 2.55 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; Aminoacylated fMet-tRNAmet 8vtv 2A 2800 2.55 RF02541 39039256 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<..<<<<<<<....<<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>>..<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....((............).)....))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((.......(((((((....)))))))....)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(.((.))......(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; 23S Ribosomal RNA 8vtv 2x 77 2.55 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution; Aminoacylated fMet-tRNAmet 8vtx 1A 2871 2.4 RF02541 URS00001698E8_300852 39039256 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<..<<<......(..>>...>>>.........<<......>>.).>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<...............>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<......>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.(...((..........)..).)..)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8vtx 1x 77 2.4 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; Aminoacylated fMet-tRNAmet 8vtx 2A 2800 2.4 RF02541 URS00001698E8_300852 39039256 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacganaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>...>..>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....)))).....(())....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....((............).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(.........(((((..((.......((((((((....))))))))....))............)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; 23S Ribosomal RNA 8vtx 2x 77 2.4 RF00005 URS000041AF00_562 39039256 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution; Aminoacylated fMet-tRNAmet 8vxx A 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-061; Chains: A,B,C 8vxx B 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-061; Chains: A,B,C 8vxx C 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> (((.((........................)).))) Mango II bound to 365A-061; Chains: A,B,C 8vxz A 36 3.0 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-084; Chains: A,B,C 8vxz B 36 3.0 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-084; Chains: A,B,C 8vxz C 36 3.0 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-084; Chains: A,B,C 8vy0 A 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-087; Chains: A,B,C 8vy0 B 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-087; Chains: A,B,C 8vy0 C 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-087; Chains: A,B,C 8vy1 A 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-088; Chains: A,B,C 8vy1 B 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-088; Chains: A,B,C 8vy1 C 36 3.1 URS0000D77919_32630 32630 gcguacgaaggagaggagaggaagaggagaguacgc <<<<<<........................>>>>>> ((((((........................)))))) Mango II bound to 365A-088; Chains: A,B,C 8x0s A 11 2.956 38860430 9606 ggggccggggc ........... ........... Crystal structure of r(G4C2)2; RNA (5'-R(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*C)-3') 8x0s B 11 2.956 38860430 9606 ggggccggggc ........... ........... Crystal structure of r(G4C2)2; RNA (5'-R(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*C)-3') 8xtp B 595 2.9 39890981 399795 gggcgaccgugaaacggcgcugggcaggaaauggcccagugaccuggucaauggugaaagucggugaaagaccgaccgguggggcguaucgaaagagcgcaacaccugccgcacaggauggcuucugagguaccggugacgguacagaacgcggaggggaaaccuggaagcgagggcaccucgggaaaccgggggucgaugcauagcucaaaccuguaacggcaccaguggagggugcugugcggagcaacguggagccacaggcaugaagccgugguucguagucgaugagacaagcggugaguaagggaagggcugcgaacaucgccuccccgaaauccaaggaaagccgaaaggcuagccgcuuuguugagacaguggcgccacguugcgcauuagccgugaccuaaacggggaaccucuuggccguaccgacucggguggcaccggucgggcucgauggcucaagagggggagaugugaugauuaggguuugacccgugaugcgauacgaccgaagcauccggggagcugucugacgaagagucggcagcaguggguuuggcgacccgcuccgaaagucgcaagcguuugc ..((..<<<<.....<<<<<<<<<<........>>>>>>>>.>>.<<<<<.<<<<....<<<<<.......>>>>>.<<<<..<<<<.<<....>>>>>>..>>>>..<<<<<<<<<.<....<<....<<<<<<....>>>>>>....<<<...<<<....>>>....>>>..<<<.<<<<<<....>>>>>>>>>>>......))....>>>>>....<<<<<<.......>>>>>>.>>>>>.<<<<<<<<<.<<<<<.<<<.....>>>..[[.((((.<<<.....<<<<<<<<<<......<<<.<<<.<.<.......>>>>>>>>.....<<<..>>>..<<<....>>>..>>>>>.>>>>>..>>>.>>>>>.>>>>>>>>>......>>>>>>>>>...>>>>....<<<<<<<<<<<<..<<<<.<<<......>>>>>>>......>>>>>.>>>>>>>......<<<<<<.....<<......<<<<.<<<<<...))))]]...>>>>>>>>>..<<<<.<<<<<.....>>>>>>>>>.<<<<<<......>>>>>>.>>....>>>>>>......... ..[[..((((.....((((((((((........)))))))).)).(((((..(((....(((((.......)))))(((((..((((.((....))))))..)))).)(((((((((.(..(.((....((((((....))))))....(((...(((....)))....)))..(((.((((((....))))))))))).)....]]....)))))....((((((.......)))))).))))).(((((((((.(((((.(((.....)))..[[.[[[[.(((.....((((((((((......(((.(((...(.......).)))))).....((....))..(((....)))..))))).)))))..))).))))).)))))))))......))).)))))...))))....((((((((((.(.(((((.(((......)))))))).....).))).)))))))......((((((.....((......((((.(((((...]]]]]]...)))))))))..((((.(((((.....))))))))).((((((......)))))).))....))))))......... Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state; RNA (595-MER) 8xtp A 133 2.9 39890981 399795 ccggggcgccaccccggaagugaugcgagucgccaacucgcaucacaagcaaacgcuguagccgcgugccucuaauagggcuggcgcgguugcgaagggcgcuggugagugcaacucucaccuucgacccaau <<<<<<.....>>>>>>..<<<<<<<<<<<.....>>>>>>>>>>>...........<<.<<<<<<<<<<<......>>>>..>>>>>>>.>>...<<<<<..<<<<<<.......>>>>>>..>>.>>>... ((((((.....))))))..(((.(((((((.....))))))).)))...........((((((((((((((......))))..))))))))))...(((((..((((((.......))))))..)).)))... Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state; RNA (133-MER) 8xtq A 746 2.96 39890981 399795 ccggggcgccaccccggaagugaugcgagucgccaacucgcaucacaagcaaacgcuguagccgcgugccucuaauagggcuggcgcgguugcgaagggcgcuggugagugcaacucucaccuucgacccaauccaaggcaaaaccaaauugaaguugggcgaccgugaaacggcgcugggcaggaaauggcccagugaccuggucaauggugaaagucggugaaagaccgaccgguggggcguaucgaaagagcgcaacaccugccgcacaggauggcuucugagguaccggugacgguacagaacgcggaggggaaaccuggaagcgagggcaccucgggaaaccgggggucgaugcauagcucaaaccuguaacggcaccaguggagggugcugugcggagcaacguggagccacaggcaugaagccgugguucguagucgaugagacaagcggugaguaagggaagggcugcgaacaucgccuccccgaaauccaaggaaagccgaaaggcuagccgcuuuguugagacaguggcgccacguugcgcauuagccgugaccuaaacggggaaccucuuggccguaccgacucggguggcaccggucgggcucgauggcucaagagggggagaugugaugauuaggguuugacccgugaugcgauacgaccgaagcauccggggagcugucugacgaagagucggcagcaguggguuuggcgacccgcuccgaaagucgcaagc .<<<<<.{{..>>>>>...<.......<<<.....>>>.......>........<<<<<.<<<<<<<<<<<......>>>>..>>>>>>>.>>...<<.<<..<<<<<.........>>>>>..>>..>>...<....>...........[[[.[[...((..<<<<.....<<<<<<<<<<........>>>>>>>>.>>.<<<<<.<<<<....<<<<<.......>>>>>.<<<<..<<<<.<<....>>>>>>..>>>>..<<<<<<<<<.<....<<....<<<<<<....>>>>>>....<<<...<<<....>>>....>>>..<<<.<<<<<<....>>>>>>>>>>>......))....>>>>>....<<<<<<.......>>>>>>.>>>>>.<<<<<<<<<.<<<<<.<<<.....>>>.....((((.<<<.....<<<<<<<<<<......<<<.<<<.......]].]]]>>>>>>.....<<<..>>>..<<<....>>>..>>>>>.>>>>>..>>>.>>>>>.>>>>>>>>>......>>>>>>>>>...>>>>....<<<<<<<<<<<..<<<<<.<<<...}}.>>>>>>>>......>>>>.>>>>>>>......<<<<<<.....<<......<<<<.<<<<<...)))).....>>>>>>>>>..<<<<.<<<<<.....>>>>>>>>><<<<<<<......>>>>>>>>>....>>>>>>>>> .(((((.[[[.)))))............(........)................(((((((((((((((((......))))..))))))))))...(((((..((((((.......))))))..)).)))...(....)...........<[[.[[[..[[..((((.....((((((((((........)))))))).)).(((((..(((....(((((.......)))))(((((..((((.((....))))))..)))).)(((((((((.(..(.((....((((((....))))))....(((...(((....)))....)))..(((.((((((....))))))))))).)....]]....)))))....((((((.......)))))).))))).(((((((((.(((((.(((.....)))..{{.{{{{.(((.....((((((((((......(((.(((>.....]]].]].)))))).....((....))..(((....)))..))))).)))))..))).))))).)))))))))......))).)))))...))))....((((((((((...(((((.(((..]]].)))))))).......))).)))))))......((((((.....((......((((.(((((...}}}}}}...)))))))))..((((.(((((.....)))))))))(((((((......)))))))))....))))))))) Comamonas testosteroni KF-1 circularly permuted group II intron 1S state; RNA (808-MER) 8xtr A 145 2.67 39890981 399795 ccggggcgccaccccggaagugaugcgagucgccaacucgcaucacaagcaaacgcuguagccgcgugccucuaauagggcuggcgcgguugcgaagggcgcuggugagugcaacucucaccuucgacccaauccaauugaaguu <<<<<<.....>>>>>>..<<<.<<<<<<.......>>>>>>.>>>...........<<<<<<<<<<<<<<......>>>>..>>>>>>>>>>...<<<<<..<<<<<<.......>>>>>>..>>.>>>............... ((((((.....))))))...((.(((((((.....))))))).))............((((((((((((((......))))..))))))))))...(((((..((((((.......))))))..)).)))............... Comamonas testosteroni KF-1 circularly permuted group II intron 2S state; RNA (219-MER) 8xtr B 595 2.67 39890981 399795 gggcgaccgugaaacggcgcugggcaggaaauggcccagugaccuggucaauggugaaagucggugaaagaccgaccgguggggcguaucgaaagagcgcaacaccugccgcacaggauggcuucugagguaccggugacgguacagaacgcggaggggaaaccuggaagcgagggcaccucgggaaaccgggggucgaugcauagcucaaaccuguaacggcaccaguggagggugcugugcggagcaacguggagccacaggcaugaagccgugguucguagucgaugagacaagcggugaguaagggaagggcugcgaacaucgccuccccgaaauccaaggaaagccgaaaggcuagccgcuuuguugagacaguggcgccacguugcgcauuagccgugaccuaaacggggaaccucuuggccguaccgacucggguggcaccggucgggcucgauggcucaagagggggagaugugaugauuaggguuugacccgugaugcgauacgaccgaagcauccggggagcugucugacgaagagucggcagcaguggguuuggcgacccgcuccgaaagucgcaagcguuugc ..((..<<<<.....<<<<<<<<<<........>>>>>>>>.>>.<<<<<.<<<<....<<<<<.......>>>>>.<<<<..<<<<.<<....>>>>>>..>>>>..<<<<<<<<<.<..<.<<....<<<<<<....>>>>>>....<<<...<<<....>>>....>>>..<<<.<<<<<<....>>>>>>>>>>>.>....))....>>>>>....<<<<<<.......>>>>>>.>>>>>.<<<<<<<<<.<<<<<.<<<.....>>>..[[.((((.<<<.....<<<<<<<<<<......<<<.<<<.............>>>>>>.....<<<..>>>..<<<....>>>..>>>>>.>>>>>..>>>.>>>>>.>>>>>>>>>......>>>>>>>>>...>>>>....<<<<<<<<<<<<..<<<<.<<<......>>>>>>>......>>>>>.>>>>>>>......<<<<<<.....<<......<<<<.<<<<<...))))]]...>>>>>>>>>..<<<<.<<<<<.....>>>>>>>>>.<<<<<<......>>>>>>.>>....>>>>>>......... ..[[..((((.....((((((((((........)))))))).)).(((((..(((....(((((.......)))))(((((..((((.((....))))))..)))).)(((((((((.(..(.((....((((((....))))))....(((...(((....)))....)))..(((.((((((....))))))))))).)....]]....)))))....((((((.......)))))).))))).(((((((((.(((((.(((.....)))..[[.[[[[.(((.....((((((((((......(((.(((.............)))))).....((....))..(((....)))..))))).)))))..))).))))).)))))))))......))).)))))...))))....((((((((((.(.(((((.(((......)))))))).....).))).)))))))......((((((.....((......((((.(((((...]]]]]]...)))))))))..(((..(((((.....))))).))).(.((((......)))).).))....))))))......... Comamonas testosteroni KF-1 circularly permuted group II intron 2S state; RNA (595-MER) 8xts A 732 2.54 39890981 399795 ccggggcgccaccccggaagugaugcgagucgccaacucgcaucacaagcaaacgcuguagccgcgugccucuaauagggcuggcgcgguugcgaagggcgcuggugagugcaacucucaccuucgacccagaaguugggcgaccgugaaacggcgcugggcaggaaauggcccagugaccuggucaauggugaaagucggugaaagaccgaccgguggggcguaucgaaagagcgcaacaccugccgcacaggauggcuucugagguaccggugacgguacagaacgcggaggggaaaccuggaagcgagggcaccucgggaaaccgggggucgaugcauagcucaaaccuguaacggcaccaguggagggugcugugcggagcaacguggagccacaggcaugaagccgugguucguagucgaugagacaagcggugaguaagggaagggcugcgaacaucgccuccccgaaauccaaggaaagccgaaaggcuagccgcuuuguugagacaguggcgccacguugcgcauuagccgugaccuaaacggggaaccucuuggccguaccgacucggguggcaccggucgggcucgauggcucaagagggggagaugugaugauuaggguuugacccgugaugcgauacgaccgaagcauccggggagcugucugacgaagagucggcagcaguggguuuggcgacccgcuccgaaagucgcaagcguuugc <<<<<<.[[[.>>>>>>....<<<<<<<<<.{{{.>>>>>>>>>....<<<<<<<<<<<<<<<<<<<<<<<......>>>>..>>>>>>>>>>...<<<....<<<<<<.......>>>>>>.....>>>.{{.[[[..((..<<<<.....<<<<<<<<<<........>>>>>>>>.>>.<<<<<.<<<<....<<<<<.......>>>>>.<<<<..<<<<.<<....>>>>>>..>>>>..<<<<<<<<<.<..<.<<....<<<<<<....>>>>>>....<<<...<<<....>>>....>>>..<<<.<<<<<<....>>>>>>>>>>>.>....))....>>>>>....<<<<<<.......>>>>>>.>>>>>.<<<<<<<<<.<<<<<.<<<.....>>>.....((((.<<<.....<<<<<<<<<<......<<<.<<<......]]].}}.>>>>>>.....<<....>>..<<<....>>>..>>>>>.>>>>>..>>>.>>>>>.>>>>>>>>>......>>>>>>>>>...>>>>....<<<<<<<<<<<..<<<<<.<<<..]]].>>>>>>>>......>>>>.>>>>>>>......<<<<<<.....<<......<<<<.<<<<<...)))).....>>>>>>>>>..<<<<.<<<<<.....>>>>>>>>>.<<<<<<..}}}.>>>>>>.>>....>>>>>>>>>>>>>>> ((((((.[[[.)))))).......((((((.{{{.)))))).......(((((((((((((((((((((((......))))..))))))))))...(((....((((((.......)))))).....))).[[.[[[..[[..((((.....((((((((((........)))))))).)).(((((..(((....(((((.......)))))(((((..((((.((....))))))..)))).)(((((((((.(..(.((....((((((....))))))....(((...(((....)))....)))..(((.((((((....))))))))))).)....]]....)))))....((((((.......)))))).))))).(((((((((.(((((.(((.....)))..{{.{{{{.(((.....((((((((((......(((.(((......]]].]].)))))).....((....))..(((....)))..))))).)))))..))).))))).)))))))))......))).)))))...))))....((((((((((.(.(((((.(((..]]].)))))))).....).))).)))))))......((((((.....((......((((.(((((...}}}}}}...)))))))))..(((..(((((.....))))).))).((((((..}}}.)))))).))....))))))))))))))) Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state; RNA (814-MER) 9b00 2A 2800 2.8 RF02541 39019034 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<<....<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<..........>>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<.....<..>......>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<..<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>......>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<...>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((...))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((..))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((.....((..........)..)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((..((........(((((((....))))))).....))..........].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.((((...........))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..((((((((........)))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolution; 23S Ribosomal RNA 9b00 2x 76 2.8 RF00005 39019034 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaacca <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolution; P-site Deacylated tRNAmet 9bkd A 1672 2.6 RF01960,RF02542,RF01959,RF00177 39117603 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucugaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucguacuuggauaacugugguanuucuagngcuaauanaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucugcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgauuccggagagggagccugagaaacggcuaccacauccaaggaaggcagcaggcgcgcnaauuacccacucccgacccgggganguagugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaaauccuuuaacgaggauccauuggagngcaagucuggugccagcagccgcgguaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuuuuuacuuugaaaaaanuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaauggaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccacnaggaguggagccugcggcuuaauuugacucaacacgggaaaccucacccggcccggacacggacaggauugacagauugauagcucuuucucgauuccguggguggugnugcauggcnguucuuaguugguggagcgauuugucugguuaauucngauaacgaacgagacucuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuucuuagagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgaggaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccgggcggagcgcugagaagacggucgaacuugacuaucuagaggaaguaaaagucgnancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<<.........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<<....>>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<<..<<....>>...>>>>>.>>>>......<<..<...........>..>>.........<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.....<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<.......................>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>......<.....<<<<<..........>>>>>.....>.....>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<.......>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))(((.((((((...(.((..((.....(((.(((..((....((....((..(.).....))...))[))......(((.......(((.(.(..((....(((.....(([...((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(]((((.((((......)))))))))...)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)).).....(((((((((.............))))).))))....(.((..(...........)..))......)..((((([[....(.((((.....((..]])).......))))))))))..)))))).)))..[......(.([[...(.(.((...(((..(.....((((((.(.......((..((.......)).(((.......)))....))......).)))..)))........(.((.(.(.......................).).)).)....)....(((..(...(...((((..(((.((((((((...((........))......)))))))).))).......((....))...))))..)...)...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..(.((((((.((((......)))))))))).)..)))...((..]]))...))...].))))).).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))..........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((...(...((((..((((((((((((.......)))).)))).....))))..))))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))).))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....(((((..........))))).....)..)..))))).....((((((((.......))))))))......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((..(..........).)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ The structure of human Pdcd4 bound to the 40S small ribosomal subunit; 18S rRNA 9bln A 1672 3.9 RF01960,RF02542,RF01959,RF00177 39117603 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucugaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucguacuuggauaacugugguanuucuagngcuaauanaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucugcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgauuccggagagggagccugagaaacggcuaccacauccaaggaaggcagcaggcgcgcnaauuacccacucccgacccgggganguagugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaaauccuuuaacgaggauccauuggagngcaagucuggugccagcagccgcgguaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuuuuuacuuugaaaaaanuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaauggaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccacnaggaguggagccugcggcuuaauuugacucaacacgggaaaccucacccggcccggacacggacaggauugacagauugauagcucuuucucgauuccguggguggugnugcauggcnguucuuaguugguggagcgauuugucugguuaauucngauaacgaacgagacucuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuucuuagagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgaggaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgccgggcggagcgcugagaagacggucgaacuugacuaucuagaggaaguaaaagucgnancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<..<.....<<<.<....<<....<<<<<.........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<<....>>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>>>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<<<<<...............>>>>.>>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<.....<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<.......................>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<......>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<<.......<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>......<.....<<<<<..........>>>>>.....>.....>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<.......>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<....>>>>>>>>>......... ...((((..[.[[[..))))(((.((((((...(.((..((.....(((.(((..((....((....((..(.).....))...))[))......(((.......(((.(.(..((....(((.....(([...((.....((.(((.....))).))......))......)).((((...(((((......)))))...))))((..(((((...(......)..)))))......)).(]((((.((((......)))))))))...)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)).).....(((((((.(..(.....)....).))).))))....(.((..(...........)..))......)..((((([[....(.((((.....((..]])).......))))))))))..)))))).)))..[......(.([[...(.(.((...(((..(.....((((((.(.......((..((.......)).(((.......)))....))......).)))..)))........(.((.(.(.......................).).)).)....)....(((..((..(...((((..((..((((((((...((........))......))))))))..)).......((....))...))))..)..))...))..))))...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..(.((((((.(((((....))))))))))).)..)))...((..]]))...))...].))))).).(((......((((....))))....)))...]]].](((((.(((((((..((..(((((..(((.((((((......((........))..........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....(((.(((((....)))..(.((......)))...)).)))....(((...(...((((..((((((((((((.......)))).)))).....))))..))))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))).))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....(((((..........))))).....)..)..))))).....((((((((.......))))))))......))...)))))))))).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...(((((..(..........).)))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex; rRNA 9bz1 A 84 2.8 RF01750 0006730,1900371 1520 uagucauaugacugacggaaguggaguuaccacaugaaguaugacuaggcauauuaucuuauaugccaagccgaccgucugggc <<<<<<<<<....(((((..<<<<.....>>>>.....>>>>>>>>><<<<<<<......>>>>>>>..<<<..)))))..>>> (((((((((..(.[[[[[..((((.....))))..)..)))))))))(((((((......)))))))..(((..]]]]]..))) Cocrystal structure of Clostridium beijerinckii ZTP riboswitch with AICA; RNA (84-MER) 9bz1 B 84 2.8 RF01750 0006730,1900371 1520 uagucauaugacugacggaaguggaguuaccacaugaaguaugacuaggcauauuaucuuauaugccaagccgaccgucugggc <<<<<<<<<....(((((..<<<<.....>>>>.....>>>>>>>>><<<<<<<......>>>>>>>..<<<..)))))..>>> (((((((((..(.[[[[[..((((.....))))..)..)))))))))(((((((......)))))))..(((..]]]]]..))) Cocrystal structure of Clostridium beijerinckii ZTP riboswitch with AICA; RNA (84-MER) 9bzc A 87 2.52 RF01750 0006730,1900371 1520 uagucauaugacugacggaaguggaguuaccacaugaaguaugacuaggcauauuaucuuauaugccaaaaagccgaccgucugggc <<<<<<<<<....(((((..<<<<.....>>>>.....>>>>>>>>><<<<<<<......>>>>>>>.....<<<..)))))..>>> (((((((((..(.[[[[[..((((.....))))..)..)))))))))(((((((......))))))).....(((..]]]]]..))) Cocrystal structure of Clostridium beijerinckii ZTP riboswitch with ZMP and Cs; RNA (87-MER) 9c0i R 192 2.91 RF03016 39208082 573 ggcccuaaacaaagguuuagggguauuguacagguugugcaacacuuggauccacgcuacugauuacauuacauaucuaugcggcgagguucacaauuuguauguacugauuguggaugagaagguuggagaaagaccacuuagccggaggauguguagaauugucgcuauucugucauccuccgguuuugc ..<<<<<<<<....>>>>>>>>..<.<<<<<<<<<<<..>>>>.<.<<<..>>>.>...>>>..>>>>.>..........(((((...<<<<<<<<<<.<<<..>>>.>>>>>>>>>>.....<<<.<<.......>>>>>..<<<<<<<<<<<...<<<<<.))))).>>>>>..>>>>>>>>>>>..... ..((((((((....))))))))..(.(((((((((.(()).)).(.(((()))).)...)))..)))).)..........[[[[[...((((((((((.(((()))).)))))))))).....(((.((.......)))))..((((((((((((..(((((.]]]]].)))))).)))))))))))..... Structure of the DRT2 reverse transcriptase in complex with its non-coding RNA; DRT2 ncRNA 9c0j R 155 3.17 RF03016 39208082 573 ggcccuaaacaaagguuuagggguauuauacagcaugcggcgagguucacaauuuguauguacugauuguggaugagaagguuggagaaagaccacuugguuaagccggaggauguguagaauugucgcuauucugucauccuccgguuuugcua ..<<<<<<<<....>>>>>>>>..............(((((...<<<<<<<<<<.<<<..>>>.>>>>>>>>>>.....<<<.<<.......>>>>>.<<<.<<<<<<<<<<<<<...<<<<<.))))).>>>>>..>>>>>>>>>>>>>.>>>. ..((((((((....))))))))..............[[[[[...((((((((((.(((()))).)))))))))).....(((.((.......)))))..((.((((((((((((((..(((((.]]]]].)))))).))))))))))))).)).. Structure of the elongating DRT2 reverse transcriptase in complex with its non-coding RNA and dNTPs; DRT2 ncRNA 9c3h L1 148 2.0 RF00002 URS0000005270_9606 39571015 0003735 0005840 9606 cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacaugaucaucgacacuucgaacgcacuugcggccccgggcccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>..........>>>..>...>>>....<<....>><<<<<<<<<>>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]]..........)))..)...)))....((....))((((((((())))))))).................... Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.; 5.8S rRNA 9c3h L5 3531 2.0 RF02543,RF02540,RF02541 39571015 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgccgggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugucggcgggcggaucuggggaccgucccccgaccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcunggaaggcccggcggggaagguggcucgggggcccccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagacccgucgccgcgcucuccccccucccggcgcgccggggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccgggggaggccacgcgcgcgucccccgaagagggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnaacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgcgcucgccggccgaggugggaucccgaggccucuccaguccgccgagggngcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuagnacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcacccgacgccacgcaguuuuauccgguaaagcgaaugauuagaggucuuggngucncaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauauagacagcaccgaaucaacuagcccugaaaauggaugncgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggagccccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcuugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugggucggucgcggccggcgccuagcagccgacuuagaacuggugcggaccaggggaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugaagaaauucaaugaagcgcggnuaaacggcgggaguancuaugacucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanauuuuucacugacccggugaggcgggggggcgagccggcucucgcuucuggcgccaagcgcccggccgcgcgccggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccggucccccgccgggguccgguncngagugcccuucguccugggaaacggggcgcggccggaaaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuucugggucgggguuucguacguagcagagcagcucccucgcugcgaucuauugaaagucagcccucgacacaaggguuugu ..........................<<<<<.....<......>......>>>>>...........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<<<<...<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>...>>>>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.<<<<<.<<<<<<.<<<..>>>>>>>>>.>>>>>>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<....<<<<......<<<<.<<.....>>>>>>.......>>>>...>>>........>>>>>>..>>>>>>>>>>>....................<<<<<<.<<<<<<<.....<..>...>>>>>>>.<<<<<<.<<<<.<<<<<<<<<<..<<<<<.<<<<..<...........>...>>>>.>>>>>...>>>>>>>.>>>...>>>>..>>>>.>>..<<<<<<<<<<.....>>>>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<<......>>>>>>>..<<<<<...<<<..<<<..{[[[.((((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<.<<<<<<<................<<<.<<<<<<<<<...<<<....<<<..<.<<<<.<..<<..>>.>>>>>.>..>>>..>.>>...>>>>>>>...<<<<<<<<<.........>>>>>>>>>....>>>>>>>>>>>>..>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<..............>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........))))]]].}...............>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<..>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<.......>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<...<..........>........>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<...>>>>>>...<<<<<.....<<<<..<<.<<<<<>>>>>>>..............<<<<<<<<<<.......>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<..<<<<.......>>>>..>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>........<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.....>>>>>..>...>>>.>.....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<....<<<<<...........>>>>>....>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<.<<<<....>>>>.>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<....................<<.<<<<<<<.<<.....<<<<.<..<<<<<......>>>>>..>>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((.(.....).)))).))))....))))....((((((((((...((((((((...((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))...))))))))..))))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((((..(((((((.(((((.((((((.(((..))))))))).)))))))))...))))))))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((.......((..((....).).))........))))..))))........))))))..)))))))))))......{.............((((((.((((((..............)))))).((((((.((((.((((((((((...(((..(((....................)))..)))....))))))).)))...))))..)))).))..((((((((((.....)))))))).))..[.)))))).....))).)))))...)))))...)))))))).<((((........))))((((((..(.(((((((((((((..(((..((((..........)))..)..)))...((....))...(((((.(......).)))))..(((((...(((..(((....[..[[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......B)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((.(((((((................(((.((((((((.....((.....((....((((.(..((())).)))))....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.....A.(..)...)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}.]]]].]...].(...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))..........((..(((..))).)).......)....))...(((((........)))))]]((((.(((((...((.((((....)))).))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((....).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......((((((..((..(....(.......(((((....(.[..).....)))))((.(((((((((((...(.(.......))........)))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.(...(......((.(....).))......).)))))..)))))(.(.(.........).).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..))))))...)))))....)).[..((.((.....>].)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.(((((.(.).)))))...(((((.....((((..((.((((()))))))..............((((((((((.......))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).).(((.(.....).))).....)))))..)...))).)......((((((....))).)))...b.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.....a.......))))...))))..)))...).).)).).....(((((((.((..((((.(..(((........(((((.((((....)))).))))).......)))...(((..((((....((((.(((((((......)))))))))))...))))..)))...........)..))))..)))))))))(((((....(.......).......((.(((((((.((.....(.((.(..(((((......)))))..))).)....))....)))).))).))..))))).. Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.; 28S rRNA 9c3h L9 120 2.0 RF00001 39571015 0003735 0005840 9606 gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcuu <<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>>.. (((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....))))))))))))))).. Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.; 5S rRNA 9c3h S2 1660 2.0 RF01960,RF02542,RF01959,RF00177 39571015 0003735 0005840 9606 uaccugguugauccugccaguagcaunugcuugucucaaagauuaagccaugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucnuuaaaucaguuauggunccuunggucgcucguacuuggauaacugugguanuucuagngcuaananaugccgacgggcgcugacccccuucgcgggggggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgccccccguggcggcgacgacccauucgaacgucugcccuaucaacuuucgaugguagucgccgugccuaccauggugaccacgggugacggggaaucaggguucgaunccggaganggagccugagaaacggcuaccacauncaaggnaggcagcaggcgcgcnaauuacccacucccgacccggggangungugangaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaanuccuuuaacgaggnuccauuggagngcaagucuggugccagcagccgcggnaauuccagcuccaauancguauauuaaaguugcugcaguunaaaagcucguaguungaucuugggnuuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcagcuaggaauaaungaauaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaagagggacggccgggggcauucguauugcgccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuucauuaaucaagancgaaagucggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauuugacncaacacgggaaaccucacccggcccggacacggacagganugacagauugauagcucuuucucgauuccguggguggngnugcauggcnguucuuaguugguggagcgauuugucugguuaauuccgauaacgancgagacunuggcaugcuaacuaguuacgcgacccccgagcggucggcgucccccaacuncuuagagggacaaguggcguucagccacccgagauugagcaauaacangucugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgugauggggaucggggauugcaauuauuccccaugaacgagnaauucccaguaagugcgggucauaagcuugcguugauunagucccugcccuuuguacacaccgnccgucgnuacuaccgauuggaugguuuagugaggcccucggaucggcgcugagaagacggucgaacungacuaucuagaggaaguaaaagucguancaagguuucnguaggugnnccugcggaaggaucauua ...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.<<<..<<....<<....<<..........>>...>>.>>......<<........<<<.<....<<....<<<<..........<<.....<<.<<<.....>>>.>>......>>.........<<<<...<<<<<......>>>>>...>>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<<<......>>>>>>>>..>.>>>...>>..>.>>>.<<<....<<<....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<<...<<..<<....>>..>>.....>>>>......<<..<...........>..>>.........<<<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...<<<.<<........<<<<<<.<.......<<...<.......>.<<<<.......>>>>...>>......>.>>>..>>>........<.<<.<<<<<<<...............>>>>>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<<......<<........>>..........<<<<<.<....<<<<<........<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<.<<<........<.......<<<.<<<<....>>>>.>>>....>.........>>>.>>............<<<<<..........>>>>>...........>>>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>......... ...((((..[.[[[..))))((...(((((......(..((.....(((.(((..((....((.....(..........)....))[))......(((.......(((.(.(..((....(((.....(([...((.....((.(((.....))).))......))......)).((((...((..(.......).))...))))((..(((((...(......)..)))))......)).(]((((.((((......)))))))))...)))...))).).))).(((....(((....(((((((.........))))))))))......)))...(((.((((....))))....)))))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((((.]...))).))))).)...)........((((...((............)).....))))....(.((..(...........)..))......)..((((([[....(.(.((.....((..]])).......)).)))))))..)))))...))..[......(.([[...(.(.((...(.(..(........(..(((.(........(..((.......)).((((...)..)))....).......).)))....)........(.((.(.(..((...............))..).).)).)....)....(((..(...(...(((...(((.((((((((...(..........)......)))))))).))).......((....))....)))..)...)...))..)).)...)).)....((((((....(...((((.........))))...).))))))......{...(((.((.(((..(.((((((.(((((....))))))))))).)..)))...((..]]))...))...].))))).).(((......((.(....).))....)))...]]].]((((..(((((((..((..((.((..(((..(((((.......(........)...........(((((.(....(((((.....(..((.(((........))).))....).)))))...((.(((...(.((((((....((..(((((....)))..(.((......)))...))..))....(((...(...((.(..((((((((((((.......)))).)))).....))))..).))..).....(((((.....)))))........)))....))).))).....).))))).....).)))))...)).)))..))).(...((.(((........(.......(((.((((....)))).)))....).........))).))......(.....((((............)))).....)..)..)).)).....((((((((.......))))))))......))...))))))).)).))..(.(..((.(..((((.((..(.((((((((.(((..((((.((...((((()))))...)).))))..))).)))))))))..)).))))...).))...)..)..(((((((((....)))))))))}........ Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.; 18S rRNA 9d0j 2A 2800 2.5 RF02540,RF02541,RF02543,RF00002 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<.......<<<<<<<<....>>>>>>>>....>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....((............).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((.(()).)))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((((((((((((.(......[..(((((.....(.....((((((((....))))))))...)............].)))))).))))))))))))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....)))))))(((...)).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))...)))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; 23S Ribosomal RNA 9d0j 2x 76 2.5 RF00005 0030533 562 gcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn <<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... ((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; P-site Aminoacylated fMet-tRNAmet 9d89 D 2728 1.95 RF02540,RF02541,RF02543,RF00002 39414793 0003735 0005840 562 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacagcugugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaaaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugugaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcggcgcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguuggcccgugauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacuccuugagaguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<.[..(((.>>>.....<<<<<<<..<<<)))..].>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<..>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<......>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<.......<<<<<..<<<.>>>...>>>>>.......>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..(((((())))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((......)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{........)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((....(((((((((((.((.....))))))))))..)))...[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..(((.)))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.(.((((.....)))).))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.((((((..).)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement); 23S rRNA 9dfc 1A 2871 2.5 RF02540,RF02541,RF02543,RF00002 39372947 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcgcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccgagggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcagcggccgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagccaggagguggcuuagaagcagccauccuuuaaagagugcguaauagcucacuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccacggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<<<........>>>..>...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<.......<<<<.<<<..>>>.>>>>....>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<....(((.>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((...((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)..))...)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.(((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).))))))))).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; 23S Ribosomal RNA 9dfc 1x 77 2.5 RF00005 URS000041AF00_562 39372947 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; P-site Aminoacylated fMet-tRNAmet 9dfc 2A 2800 2.5 RF02540,RF02541,RF02543,RF00002 39372947 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu <<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<<.>>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<....<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<.>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>....<<..>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<...<<<...<<<<<<<<....<<............>.>....>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<..>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<<..>>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>.<<<.>>>.....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((...((((((((.....))))))))....{.(((((((((....(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).))))....(((((((((.[.....)))))))))....}.(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((....(((..........)).)....))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((.().)))))))).))..........]]].)....))))))))))...)))))))(((((((..)))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).((...)).....(((((((((.......)))))....((((((((.(((....(((((....)))))...)))..))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; 23S Ribosomal RNA 9dfc 2x 77 2.5 RF00005 URS000041AF00_562 39372947 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution; P-site Aminoacylated fMet-tRNAmet 9dfd 1A 2871 2.6 RF02540,RF02541,RF02543,RF00002 39372947 0003735 0005840 300852 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<<<......<<<<<<<<<<<.....<<..<<<<<<<<<<<<......<<<<<<.((..((.>>>.....<<<<<<<..<<<))..)).>>>.....>>>>>>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<..>>>>>.>>...<<<<<<.....<......>......>>>>>.>.........<<....>>...<<<<<.....<<.....>>....>>>>>...<<<....<<<<<<<<.....>>>>>>>>......<<<<<<<<<..<<<...<<<<<.<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>..>>>>>..>>>>>>>>>.>>>.....<<<<<<<<<.......>>>>>>>>>......<<<<<..((((>>>>>..>>>......>>.>>>>>>.>>...............<<....>>....>>.........<<<<....>>>>..................>>>>>>>>>>>.......<<<<<<<<<<<..>>>>>>>>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<<.....>>>...>>>...<<....>>..<<<<.....>>>>...<<<..>>>...>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<..<<<<........>>>>.>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<<<<<.....<<<<<<<<<....<<...<<<<<<<<.....<<<........>>>......>>>>>>>>..>>.....>>>>>>>>>.....>>>>>>>.>>..<<<<<<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<<<<<........<<<<<.<<<..<<.........>>...>>>.........<<......>>...>>>>>....>>>>>>>>>.>>..........)))......>>>>>>.>>>...>>>>>>><<<<<<<<.....>>>>>>>>....>>>>>><.<<<<<...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.<<...<<<...<<<....>>>...>>>...>>...<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<.<<..[[[[...>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>>>>>>>>.....>>>>>>>>>..>>><...<<<..>>>.....>>>>>>...>>>..>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<<<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>...>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.<<<.........<<<<.<<<<<<..<<<<<.<<<.<<<<<.<<<<<<<<<<<<<<<<...........<<<<<..<<<......<<<<<<<<....>>>>>>>>...>>>............>>>>>..>>>>>>>>>>>>>>>>...<<<<<....>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.<<..))))..>>>>>>>>>.............>>>>..>>>>>>.......<<<<.<.<<<<<<...<<.......>>...>>>>>>...>>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>........>>>>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<]]]]>>>>>>...>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<...>>>....<<<<<<<<<.......>>>>>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>.>>>...>>>>....>>> (((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).(((((()))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((..(((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..))))))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((..))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))...(((())))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...((((((((.(..(((..........)..)))..))))))))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..((((((((((.....{.(((((.(((..((.........))...))).....(...((......)).).)))))...)))))))))).))..........]]].)....))))))))))...)))))))((((((((.....))))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...(((()))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.((((((.((.((((((.(......[..(((((..(((......((((((((....))))))))...)))..........].)))))).)))))).)).))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))..(((...)))....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolution; 23S Ribosomal RNA 9dfd 1x 77 2.6 RF00005 URS000041AF00_562 39372947 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolution; P-site Aminoacylated fMet-tRNAmet 9dfd 2A 2800 2.6 RF02540,RF02541,RF02543,RF00002 39372947 0003735 0005840 300852 agaugguaagggcccacgguggaugccucggcacccgagccgaugaaggacguggcuaccugcgauaagccagggggagccgguagcgggcguggaucccuggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgcugcgcggggggaaccuggggaacugaaacaucucaguacccagaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagccuaaaccguccggcuuguccgggcggggucguggggcccucggacaccgaauccccagccuagccgaagcuguugggaagcagcgccagagagggugaaagccccguaggcgaaagguggggggauaggugaggguacccgaguaccccgugguucguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcuuacaagcagucacggccccggggguuguggcgugccuauugaagcaugagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgaguccgaacagggcgcaagcgcgcaaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccagggugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggagauagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacuggggccuguagagcacugauagggcuagggggcccaccagccuaccaaacccugucaaacuccgaagggucccagguggagccugggagugagggcgcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaaggcccccaagucugggcuaagugguaaaggauguggcgccgcguggcgccgcgccgaaaaugaucggggcuuaagcccagcgccgaagcugcgggucuggggccccaggcgguaggggagcguucccgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccguaagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagccauggacgagcccggccagaagcgcagggugggagguaggcaaauccgccucccaacaagcucugcgugguggggaagcccgcgggugacaaccccccgaagccagggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcgggagaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugcucccuggggugaugagccccggggagccgcagugaacaggcucuggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggagguauagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccgaaccgaagccccggugaacggcggccguaacnauaangguccuaagguagcgaaanucnuugucggguaaguuccgacnugcacgaaaagcguaacgaccggagcgcugucucggcgagggacccggugaaauugaacuggccgugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcagccugguguuggcucuuggucgcgccugcguaggauaggugggagccugugaacccccgccuccgggugggggggaggcgccggugaaauaccacccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcgggcaguuugacugnggcggucgccuccuaaaagguaacggaggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgcaaggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccuagugaaccgguggucccguguggaagggccaucgaucaacggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccacagcggcggggagguuuggcaccucgnugucggcucgucgcauccuggggcugaagaaggucccaaggguugggcnguucgcccauuaaagcggcacgcgagcuggguucagaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacgcaccucugguuucccagcugucccuccaggggcauaagcuggguagccaugugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccucccggcagccgguaaggacccgggaagaccacccgguggaugggccggggguguaagcgccgcgaggcguugagccgaccggucccaaucguccgaggucu 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(((......((((((((((.....(((..((((((((((((......((((((.[[..[[.))).....((((((...(((]]..]].)))......))))))...)))....(((....)))((((((((....)))))))).((((((.)))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((([...((((((((.....))))))))....(.(((((((((.....((...(((((.((((.(((...(((((......)))))[[(...).(((.....]])))...)))...))))..)))))..)).)))))).)))]....(((((((((.[.....)))))))))....).(((((].[[[[)))))..)))......)).)))))).))...............((....))....))......(..((((....))))............)).....)))))))))).....(.(((((((((((.))))))))))).[.(.(........).).((((((....(((((((((((((..(((...(((.....)))...)))...((....))..((((.....))))....((()))...)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((..((((.......<)))).)))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....)))))(((((((((.([..(((((((((...(((...(((.((((....(((..........)).)....)))).)))..)).)...)))))))))..).]))))))).))..(((((((.((......)).))))))).....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((((((()))))))))).))..........]]].)....))))))))))...)))))))(((((((())))))))....))))))(.(((((...(((......(((((.(((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[((((.((...(((...(((....)))...)))...))...(((((........)))))]](((((((((((((...((((....(((((.(((..(((((.((((.(((..{{..).))))))(((...((((((((((((((((.((.....))))))))).....)))))))))..)))(...((((..)))).....))))))...)))..)))))(..).....))))...))...))))))))))))))).))).....((......)).)))).(((((....)))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((((((((.....))))))))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((...((...(((((....)))))...))...))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((..(......((((.((((((..(((((.(((.(((((.(((((((.((((((((.(.........(((((..(((......((((((((....))))))))...)))............)))))).)))))))).)))))))...(((((....)))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..(((...{..)))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......(((((.(.((((((...((.......))...))))))...)))).).)......((((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))).).....(.(((((....))).)).)..>.)...)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((.}}.))))))...)))))...)))).)))))...(((....((((.............))))....))).))))..]....))))))).(((.))).....(((((((((.......)))))....((((((((..((....(((((....)))))...))...))))).)))...))))....))) Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolution; 23S Ribosomal RNA 9dfd 2x 77 2.6 RF00005 URS000041AF00_562 39372947 0030533 0006412 562 cgcggggnggagcagccugguagcucgucgggnucauaacccgaaggucgucggnucaaauccggcccccgcaaccn .<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<<<<<.......>>>>>>>>>>>..... .((((((..((((......[..)))).(((((.......))))).....(((((..]....)))))))))))..... Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin B, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.60A resolution; P-site Aminoacylated fMet-tRNAmet 9dtr 6 102 2.31 RF00026 38746449 0030621 0000244,0000353 0005688,0046540 4932 guucgcgaaguaacccuucguggacauuuggucaauuugaaacaauacagagaugaucagcaguuccccugcauaaggaugaaccguuuuacaaagagauuu <<<<<<<<<<.....>>>>>>>>>>.....................................<<<..<<<.....>>>...>>>.................. ((((((((((.....)))))))))).....................................(((.((((.....)))..)))).................. Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution; U6 snRNA 9dtr E 33 2.31 38746449 4932 agugaucuagaaagagauccaccuaucauguug ................................. ................................. Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution; UBC4 mRNA spliced exons 9dtr I 48 2.31 38746449 4932 guaugucuaaaguuaugcucuuauuuacuaacaaaaucauugaacuag ................................................ ................................................ Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution; UBC4 lariat-intron 9esh 6 92 3.2 RF00026 39833470 0030621 0000244,0000353 0005688,0046540 4896 gaucuucggaucacuuuggucaaauugaaacgauacagagaagauuagcauggccccugcacaaggaugacacugcgacauugagagaaaac <<<<....>>>>......................................<<...<<<.....>>>....>>.................... ((((....))))......................................((..((((.....)))..).)).................... Structure of a B-state intermediate committed to discard (Bd-I state); U6snRNA 9esi 6 92 3.1 RF00026 39833470 0030621 0000244,0000353 0005688,0046540 4896 gaucuucggaucacuuuggucaaauugaaacgauacagagaagauuagcauggccccugcacaaggaugacacugcgacauugagagaaaac <<<<<..>>>>>......................................<<...<<<.....>>>....>>.................... ((((....))))......................................((..((((.....)))..).)).................... Structure of a B-state intermediate committed to discard (Bd-II state); U6snRNA 9f9s M1 3190 2.9 RF02540,RF02541,RF02543 URS000061F377_4932 39566505,31588918 0003735 0005840 4932 uugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagaggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugnaacnnggaccaaggagunuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaugucuucggauggauuugaguaagagcauagcuguugggacccnanagauggugancuaugccugaauagggugaagccagaggaaacucugguggaggcucguancgguucugncgugcaaaucgaucgucgaaunuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugagguaaagcgaaugauuagagguuccggggucgaaaugaccuugaccuauucucaaacuuuaaauauguaagaaguccuuguuacuuaauugaacguggacauuugaaugaagagcuuuuagugggccauuuuugguaagcngaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaunuuggugguagunncaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugauaaccgcagcaggucuccaaggugaacagccucuaguugauagaauaanguagauaagggaagucggcaaaauagauccguaacuucgggauaaggauuggcucuaagggucgcgaucaacuuagaacugguacggacaaggggaaucugacugucuaauunaaacauagcauugcgauggucagaaagugauguugacgcaaugugauuucugccnagugcucugaaugucaaagugangaaauucaaccaagcgcggguaaacggcgggaguancuaugacucucuuaagguagcnannugccucnucaucuaauuagugacgcgcaugaauggauuaacgagauucccacugunccuaucuacnaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaaagaagacccuguugagcungacncuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuuauucaaugaagcggagcuggaauuccacguucuagcauucaaggucccauucggggcugauccggguugaagacauugucagguggggaguuuggcugnggcggcacaucugunaaacgnuaacgcagauguccuaaggggggcucauggagaacagaaaucuccaguagaacaaaaggguaaaagcccccuugauuuugauunucagngugaauacaaaccaugaaaguguggccuaucgauccuuuagucccucggaauuugaggcuanangugccagaaaaguuaccacagngauaacuggcuuguggcagucaagcguucauagcgacauugcuuuuugauucuungaugucggcucuuccuaucauaccgaagcagaauucgguaagcguuggaunnuucacccacuaauagggaacgugngnuggguuuagancgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccuugguuacgaucugcugagauuaagccuuuguugucugauuugu ........................<<<<<<.....<......>......>>>>>.>.........<<....>>..<<<<<......<<.....>>.....>>>>>..[[[..<<.......<<.<<<<<<...>>>>>>.>>.......>>....<<<<<<.<<<<<<..<<<<<<<<<<<<<<....<<<<......>>>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>..>....>>>>>>>>>>>........<<<<<<<........>>>>>>>.....(((((..<<<<<<)))))..]]]..................................<<....>>...............<<<<....>>>>..................................<<<<<.<<<<<....<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<<....>>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>..<<<<........>>>><<<<<<...<<<<<<<.<<<<<<..<<<...<<<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<....>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....>>>>>>.>>>>>>>.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<<<<<<.....<<<....<<<..<.<<<<...<<<<<<<...>>>>>>>.>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<<...<<.........>>...>>>.........<<......>>...>>>>>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>.....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>........<..<<...........>>.>....>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<<<<<<<....>>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<.........<.....<<<<<....<....>.....>>>>><<.<<<<<<<<<<<>>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<<.<<<<<<<<..<<<<<<<<<<<<...<<<..........................................>>>..>>.>>>>>>>>>>...<<<<<.....<<<<..<<<<..>>>>...............<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..((((.>>>>>>))))))))))..........]]]]..}}]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>..>>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.<.<<<<<<...............>>>>>>.><<<<<...<<<<<...<<<<<<<<<<}}}.>>>>>..>>>>>..>>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>>>>>.............>>.>>>.>>>>>>..<<<<<.<.............>.....<<<<<<<<<.<<<....<<<<.<..<<<<<....>>>>>..>>>>>...>>>....>>>>.>>>>>..>>>>>.. ........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((.........(((.((((((...)))))).))....)........((((((.(((((..((((((((((((((...({((((......)))))[[(...).(((....}]])))....))))))))..))))).).....)))))))))))...)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................(((((.((((((...(((((((((((((((((((((((.......(((((((......((((.(....).)))).......))))))).....))))).))))))))))........(((....)))....))))))))....)))))).))))).<((((........))))((((((..(.((((((.((((((..(((...(((.......)))...)))...((....)).......(((((..(((((....)))))...))))).((((((((....(....)....))).))).))....)))))).))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))).((((((....(.(((....))).)((((((((((....((.(((((((.....(((....(((..(.((((...((((((.....)))))).)))).)..)))..)).).....)))))...((((..(((.(......))))..)))).....))))..)))))))).))..((((.(((((.....))))).))))....(((......)))...(((((((...((([[[...(.((((((......(..........(((.((((((((((.....{.(((((.(((...((.........))...))).....(...((......)).).)))))...)))))))))))))..........]]].)....))))))))))...)))))))(((((((((.........)))))))))....))))))(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......))))))((((.....((((..((...(((((....((.....))..)))))....[[(((.((...((....(((....))).........(.(.............).)....))....))...(((((........)))))]]((((..(((((((...((((....)))...(.[[((((((...((((.((((((((((((((((((...{{..))))))(...(((((....(((((.....(((.....))).....))))).....)))))....)((((((((....)))))))))))).).))))))).))))(...)....))))))...))....))))..))).)))).)))..)).....((......)).)))).((((.....))))..))))..((((.....(((((((.((..(....(.......(((((....(.[..).....)))))((.((((((((((()))))..)))))).))(...).......(((((((((.>.((.........))...(((((((....((((.....))))......))))))).].(((.(((..((((((.....((.....((((....)))).....))..))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).))))))).)..))).)))))))..))))))....)).[..(((((.....>].)))))....(((((..(((.((......((((.((((((..(((((.((((((((..(((((((((((.....((............(..........................)..))....).))))))))))....((((.....((((..((((()))))..........]]...((((((....))))))..))))..))))......))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((][.[[[))....))))))).(.(((..((((....{..))))..))))(((....))).))]]].].....((((((..((((.]]]]]]))))))))))....)}....))))..)))))).......((.(.(.((((((...((.......))...))))))...)).).)........((((.((((((..(.(((((((......))))))..).).(((.(.....).))).....)))))..)...))).).....(((((((....))).))))..a.))..))).)))))....((((((((..((((.(.(((((......(....).....))))).)(((((...((((....((((((((((}}..)))))..)))))...))))..))))).((((...((((.....}.......))))...)))).))))....)))))))).......((((((.(((.((....((.(........(((((((..).)))))).....))).......((((((...(((((.(..(((......)))..).))))).)))))).............)).))).))))))..(((((.(..(.......)..)...(.(((((((((.(((....((((.(..((((((..))))))..)))))...)))....)))).)))))).))))).. Yeast SDD1 Disome with Mbf1; Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1) with modifications 9fbv a 2753 2.4 RF02541 38826346 0003735 0005840 679895 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggcgugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcgcaagcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguugacccguaauccggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuuaaggguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<<....>>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<....<...<<<<<..<<....>>...>>>>>..>.....>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>>..>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..((((((....))))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..((....))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).)......(.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..).....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). 70S Escherichia coli ribosome with P-site initiatior tRNA.; 23S ribosomal RNA 9fbv A 1519 2.4 RF00177,RF01959,RF02542,RF01960 URS000081169C_679895 38826346 0003735 0005840 679895 aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugccuucgggaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngaaccugcgguuggauca .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<<..<<<<<<<<<......>>>>>>.>>>>>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<.>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.........<<<...<<<<<....>>>>.>>>>..>>.>>>>>>..<<<<......<<<<....>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>...<......>..>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>...... .......((((..[.[[[..)))).((((.(((((..(((((((((....(((.(((..(((..((.((..((((((((........))))).)))))..)))))......(((......(((((((..((...(((((((.(.((.....((((((....))))))......)).).....(((....)))....((((((.)))))).)))))))..)).)))))))(((....(((..((((((((.......)))))))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..((((......((((....)))).....))))..((.(((((...(....((((((((.......)))))))).....)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...(......)..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..... 70S Escherichia coli ribosome with P-site initiatior tRNA.; 16S ribosomal RNA 9fmd 6 97 3.3 RF00026 38925148,30705154 0030621 0000244,0000353 0005688,0046540 9606 gugcucgcuucggcagcacauauacuaaaauuggaacgauacagagaagauuagcauggccccugcgcaaggaugacacgcaaauucgugaagcguu <<<<<.<<....>>>>>>>.....................................<<...<<<.....>>>....>>................... (((((.((....))))))).....................................((..((((.....)))..).))................... Integrative model of the human post-catalytic spliceosome (P-complex); U6 snRNA 9gmo A 3394 2.59 RF02543,RF02540,RF02541 38746087 0003735 0005840 9606 cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuagucagcggaggagaagaaacuaaccaggauucccucaguaacggcgagugaacagggaagagcccagcgccgaauccccgccccgcggcggggcgcgggacauguggcguacggaagacccgcuccccggcgcggggggcccaaguccuucugaucgaggcccagcccguggacggugugaggccgguagcggcccccggcgcgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaaagcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauagucaacaaguaccguaagggaaaguugaaaagaacuuugaagngngaguucaagagggcgugaaaccguuaagagguaaacgggugggguccgcgcaguccgcccggaggauucaacccggcggcggguccggccgugcccggcggaucuggaccgucccccggcgaccggccgccgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacggcugggaaggcccggcggggaagguggcucggccgaguguuacagcccccccggcagcagcacucgccgaaucccggggccgagggagcgagaccgucgccgcgcucuccccccugggggggccgggccaccccucccacggcgcgaccgcucggggcggacuguccccagugcgccccgggcgggucgcgccgucgggcccggggggccacgcgcgcguccccggggacggcggagcgagcgcacggggucggcggcgacgucggcuacccacccgacccnucuugnnacncggaccaaggagunuaacacgugcgcgagucgggggcucgcacgaaagccgccguggcgcaaugaaggugaaggccggcgccggccgaggugggaucccgaggccucuccaguccgccgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagcacgagcgcacguguuaggacccnanagauggugancuaugccugggcagggcgaagccagaggaaacucugguggagguccguagcgguccugacgugcaaaucggucguccgaccuggguauagnggcgaaagacuaaucgaaccaucuaguagcugguucccuccgaaguuucccucaggauagcuggcgcucucgcagacccgacacgcaguuuuauccgguaaagcgaaugauuagagguaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggcguggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcngaacuggcgnugcgggaugaaccgaacgccggguuaaggcgcccgaugccgacgcucaucagaccccagaaaagguguugguugauaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauacccggccgucgccggcagucgagaguggacgggaccgcggacgcuacgccgcgacgaguaggagggccgcugcggugagccuugaagccuagggcgcgggcccggguggagccgccgcaggugcagaunuuggugguagunnnaaauauucaaacgagaacuuugaaggccgaaguggngaaggguuccaugngaacagnanuugaacaugggucagucgguccugagagaugggcgagcgccguuccgaagggacgggcgauggccguugcccucggccgaucgaaagggagucggguucagauccccgaauccggagcggagaugggcgccgcgaggcguccagugcgguaacgcgaccgaucccggagaagccggcgggagccccggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguucgccccgagagaggggcccgugccuuggaaagcgucgcggcggcggcguccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaaucucgcgccgggccguacccnuauccgcagcaggucuncaaggugaacngccucuggnauguuggaacaanguagguaagggaagucggcaagcnggauccguaacuucnggauaaggauuggcucuaagggcugcagccgacuuagaacuggugcggaccaggngaauccgacuguuuaauuaaaacaaagcaucgcgaaggcccgcggcggguguugacgcgaugugauuucugccnagugcucugaaugucanagugangaaauucaaugaagcgcggnuaaacggcgggagcucucuuaagguagcnaanugccucnucaucuaauuagugangcgcaugaanggaugancgagnuucccacugunccuaccuacuauccagcgaaaccacngncaagggaacgggcuuggnggaaucagcggngaaagaagacccuguugagcuugacncuagucuggcacggugaanagacguuuuuucacugacccggugaggcgggggcuucuggcgccaagcgcccggccgcggccgggcgcgacccgcuccggggacagugccagguggggaguuugacugnggcgguacaccugucaaacgguancgcaggnnuccuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaaaagcucgcuugaucuugauuuucagnacgaauacagaccgugaaagcggggccucacgauccuucugaccuuuuggguuuuaagcaggangugucagaaaaguuaccacagngauaacuggcuuguggcggccaagcguucauagcgacgucgcuuuuugauccuungaugucggnucuuccuaucauugugaagcagaauucaccaagcguungaunnuucacccacuaauagggaacgugngcugggnuuagancgucgugagacagguuaguuuuacccuacugaugnuguguuguugccaugguanuccugcucaguacgagaggaaccgcagnuncanacauuugguguaunugcuuggcugaggagccaauggggcgaagcuaccaucugugggauuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauacggcagcgccgcggagccucgguuggccucggauagccgguuccggugcggagugcccuucguccugggaaacggggcgcggccggaaaggcggccgcccccucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaaccauucguagacgaccugcuugggucgggguuucguacguagcagagcagcgcugcgaucuauugaaagucagcccucgacacaaggguuugu .........................<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..<<<..<<<<<...<<<<<<<<<<.....>>>>>>.>>>>.....>>>>>..<<<<<<<<<<...<<<<<<<<.<<<<<<<<....<<<<......>>>>.....((......<<<.....))>>>...>.>>>>>>>...>>>>>>>>..>>>>>>>>>>.......<<<<<<<........>>>>>>>.....<<<<<..((((((>>>>>..>>>..................................<<....>>...............<<<......>>>..................................<<<<<<<<..<<<.<<...<<<<<<<<.<<<.....<<<<<<<<<<<..<<<<<<<.....<<<<<.<<..>>>>>>>...>>>>...>>>>>>>>>>>>>>......>>>.>>>.>>>>>...<<<<<<<<<<<<<<<<<<<<<<<...<<..<<<..<.<<<<......<<<<<..>>>>>.......>>>>.>.>>>........>>>>>>..>>>>>>>>>>>...................<<<<<<.<<<<<<..>>>>>>.<<<<<<.<<<<.<<<<<<<<<<<<<<<<<<<<<<<<.<<<<....>>>>.>>>>>>>>>>>.>>>>>>>>>>.>>>...>>>>>>>>.>>..<<<<<<<<..>>>>>>.>>....>>>>>>.....>>>.>>>>>...>>>>>...>>>>>>>>..<<<<........>>>><<<<<<....<<<<<<<<<<<<<..<<<...<<<<........>>>>.....>>>...<<....>>...<<<<<<..>>>>>>..<<<<<...<<<..<<<...[[[.((((>>>..>>>....>>>>>.<<<<<<<<<.<<<<......>>>>>>>>>>>.>>....>>>>>>>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...............<<<.<<<<<<<<<...<<<....<<<..<.<<<..>>>.>..>>>..>>.>...>>>>>>>...<<<<<<<<<.<......>>>>>>>>>>....>>>>>>>>>>>>.>>>..<<<<.<<<<<.....>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.......<<<<<.....<<..........<<<.<<<<<<<<<<.>>>>>>>>>>>>>..........))).>>...>>>>>..>>>...>>>>>>><<<<<<.<<<..........)))).]]].............>>>>>>>>>....>>>>>>...<<<<<<<<.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>........>>>>>><<.....<<.....<<<<<<.......>>>>>>.<<<.....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>..........<<.<<<<<<<<..>>>>>>>>>>......>>....>>>..<<<<<........>>>>>))<<<<.<<<<<..<<<<<<<<....>>>>>>>>..<<<....>>>...<..<<<<<<<...<<<<<<<<<<<<.<<<<<<<<<<..[[[..>>>>>>....<<<<<.<<<<.<<<<.....<<<.....>>>.....>>>>>>>>..>>>>>.....<<<<<<<....>>>>>>>>>>>...>>>>>>>>>>>>.........>>>>>>>..>..........>>.>>>.>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>....<<<<.....<<<<<<<.<<...............<<<<<....<<..>>.....>>>>><<.<<<<<<<<<<..>>>>..>>>>>>.>>............<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>>>.>>>>..>>>>><<<<..>>>>........<...........<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<<<..>>>>>>>>>...<<<<<.....<<<<...............<<<<<<<<<<..>>>>>>>>>>..>>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.[.(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>><<<<....>>>>>>)))].....<<<<<<<..<<<..)))))).>>>>>>>>>>.........>>>>..>>>>>>.......<<.<.<.<<<<<<...<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<..<.<.<<<<<......>>>>>...>.>.<<<.<.....>.>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>>>.....<<<<<<.<..<<<..<.<<<<<.................>>>>>.><<<<....<<<<....<<.<<<<<<<]]].>>>>>..>>.>>...>>>>...>>>><<<<<...<<<<<...........>>>>>...>>>>>.>>>...>.>>>>>>.....<<<<<<<.<<..<<<<....<<<........<<<<<..>>>>>.......>>>...<<<..<<<<....<<<<.<<<<<<<......>>>>>>>>>>>...>>>>..>>>..............>>>>..>>>>>>>>><<<<<.<.............>..<<.<<<<<<<.<<.....<<<<....<<<<..>>>>...>>>>....>>....>>>>.>>>.>>..>>>>>.. .........................(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((...(((..(((((((((((.....)))))).))))....))))....(((((((((....((((((((.((((((((..({((((......)))))....[[(...).(((....}]])))...).)))))))...))))))))...)))))))))..)....(((((((........))))))).....(((((..[[[[[[)))))..)))..................................((....))............(..((((....))))............).....................((((((((..(((.((...((((((((.(((.....(((((((((.(..((.((((.(...(((((.((())))))))..)))))....))).)))))))))......))).))).)))))...(((((((((((((((((((((((...((..(((..(.((((.......((((()))))........)))).).)))........))))))..)))))))))))......{............((((((.((((((())))))).((((((.((((.((((((((((((((((((((((((.((((....)))).))))))))))).)))))))))).)))...)))))))).))..((((((((())))))).))....)))))).....))).)))))...)))))...)))))))).[((((........))))((((((....(((((((((((((..(((..((((..........)))..)..)))...((....))...((((((()))))))..(((((...(((..(((...[[[.[[[[)))..)))....))))).(((((((((.(((((...).))))))))))).))....)))))))))))))..((.(...((((((.....((((((((((.((((...(((((((....)))))))...)<)))...(((..((.((.......A)))).)))..).))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.(((((((...............(((.((((((((.....((.....((....(((..)))....))...))......))))))...(((((((((.(......))))))))))....))))))))))))..))..((((..(.((.....)).)..))))....(((......)))...(((((((...((([[[...(.(.(((((......(..........(((.((((((((((.)))))))))))))..........]]].)....))))))))))...)))))))((((((.(((........}.]]]].]]](...)........)))))))))....)))))).(.((((((((.((......((((.((((....))))))))...))))))))))..).....))))))((.....((.....((((((.......)))))).(((.....((((..((..(((((((...((.....)).))))))....[[(((.((...(.....(((....)))...(.)....((.((((((((())))))))))).......)....))...(((((........)))))]]((((.(((((...(((((((....)))))))..((((....)))...(...((((((...((((((((((((((((((((((...{{{...)))))....(((((.((((.((((.....(((.....))).....))))))))..))))).....((((((((.).))))))))))).).))))))))))))(...)....))))))...)).........)).))).)))).))).))).....((......)).)))).((((.....))))..)))....(((......(.((((..((..(....(.......(((((....(.[..).....)))))((.((((((((((()))))..)))))).))(...).......(((((((((.>.(...........)...(((((((....((((.....))))......))))))).].(.(.(((..((((((.....(......((.(....).))......)..))))..)))))(.(.().).)........((..........(((((.......)))))..)..)....).)....)).))))))).)..)))..)))).)...)))))....)).{..((.((.....]}.)).))....(((((..(((.((......((((.(((((...(((((.(((((((((.(((((.(((()))).)))))...(((((.....((((...............((((((((((()))))))))))..))))..)))))....)))))))))..)))))..(((......[)).)((((((..........]))))))([((...(((((((.(.((((((.......))))))...).((]..[[[))....))))))).(..((....((....{..))....)).)(((....))).))]]].......((((((..(((..]]]]]].)))))))))....)}.....)))..)))))).......(....(.((((.(...((.......))...).))))...)....)........((((.((((((..(.(.(.(((......))).)...).)..((.(.....).))......)))))..)...))).)......((((((....))).)))...a.))..))).))))).....(.((.(.(..(((..(.(((((......(....).....))))).)(((.....((((....((.(((((((}}}.)))))..)).))...))))....))).((((...((((.............))))...))))..)))...).).)).).....((((((..((..((((.(..(((........(((((..))))).......)))...(((...(((....((((.(((((((......)))))))))))...)))...)))...........)..))))..)).))))))(((((....(.......).....((.(((((((.((.....(.((.(..((((()))))..))).)....))....)))).))).))..))))).. eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16; 28S rRNA 9gmo B 118 2.59 RF00001 38746087 0003735 0005840 9606 ucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaagcuaagcagggucgggccugguuaguacuuggaugggagaccgccugggaauaccgggugcuguaggcu <<<<<<<<....<<<<<<<<.....<<<<<..............>>>..>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>....>>>>>>>>>>>>>>>.. ((((((((....((((((((.....((((((...(....)...))))..))....)))))).))((((((......((.((..((....)).)).)).....)))))))))))))).. eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16; 5S rRNA 9gmo C 148 2.59 RF00002 URS0000005270_9606 38746087 0003735 0005840 9606 cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcuagcugcgagaauuaaugugaauuncaggacaugaucaucgacacuucgaacgcacuugcggccccgggcccggggcuacgccugucugagcgucgcu .........................................<<<<<<<<<....>>>>.....<.<<<......>>..........>>>..>...>>>....<<....>><<<<<<<<..>>>>>>>>.................... .........................................((((((.[[.....))).....(.(((......]]..........)))..)...)))....((....))((((((((())))))))).................... eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16; 5.8S rRNA 9gr1 A 1513 3.17 RF00177,RF01959,RF02542,RF01960 39607923 0003735 0005840 469008 aaauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaacacaugcaagucgaacgguaacaggcugacgaguggcggacgggugaguaaugucugggaaacugccugauggagggggauaacuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagggggaccuucgggccucuugccaucggaugugcccagaugggauuagcuaguaggugggguaacggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagccacacuggaacugagacacgguccagacuccuacgggaggcagcaguggggaauauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaagaaggccuucggguuguaaaguacuuucagcggggaggaagggaguaaaguuaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuccgugccagcagccncgguaauacggagggugcaagcguuaaucggaauuacugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccccgggcucaaccugggaacugcaucugauacuggcaagcuugagucucguagagggggguagaauuccagguguagcggugaaaugcguagagaucuggaggaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggugcgaaagcguggggagcaaacaggauuagauacccugguaguccacgccguaaacgaugucgacuuggagguugugccggcguggcuuccggagcuaacgcguuaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaauugacgggggcccgcacaagcgguggagcaugugguuuaauucgaunnaacgcgaagaaccuuaccuggucuugacauccacggaaguuuucagagaugagaaugugcgaaccgugagacaggugcugcauggcugucgucagcucguguugugaaauguuggguuaagucccgcaacgagcgcaacccuuauccuuuguugccagcgguccggccgggaacucaaaggagacugccagugauaaacuggaggaagguggggaugacgucaagucaucaugncccuuacgaccagggcuacacacgugcuacaauggcgcauacaaagagaagcgaccucgcgagagcaagcggaccucauaaagugcgucguaguccggauuggagucugcaacucgacuccaugaagucggaaucgcuaguaaucguggaucagaaugccacggugaauacguucccgggccuuguacacaccgnccgunacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgggagggcgcuuaccacuuugugauucaugacuggggugaagucgnaacaagguaaccguaggngnnccugcgguuggaucaccuccuuu ........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.<<<..<<<..<<.<...<<<.>>>.>..>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<.....<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<<<..<<<..>>>>>>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.........>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<<..>>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<......<<<<<..>>>>>.....>>>>...<.<<<<<......<.<<<<<<<<.......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.<<<<<<<<<<<<..>>>>>>>>>>>>..<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>>>>>.......>>>>>.>>.<<<.<<<..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<...<<..<<<.....>>>>>....>>>>>>>.....<<<<<.....>>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<<<..<<...<<<....>>>...>>....>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<<..>>>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>.............. ........((((..[.[[...)))).((((.(((((..(((((((((....(((.(((..(((..((.((..(((.)))))..)))))......(((......(((((((..((...(.(((((.(.((.....((((((....))))))......)).).....(((....)))....((((((..((....)))))))).))))).)..)).)))))))(((....((...((((((((.......)))))))).))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...)))))).).....(.(((...(((((....)))).))))).)).))))))..(((.......((((....))))......)))..((.(((((...(...(((((((((.......)))))))).)...)....)))))....)).((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((((.....))))))....))))))))..)))))))))..(((((((((...((((((((....(((((((...((........))......)))))))....).......((....)).)))))))..))).)))))..))))...))))....((((((...((...((((.........))))...))))))))......{...((((((..(((((((((((())))))))))))...((..]])).....)))))))))).(((......((((....))))....)))....]].](((((.(((((((.((..(((((..((((((((((......((........))..........(((((((..(...(((((((..(((((((....)))))))...()..))))).))).((.(((...((((((.(....(((((((((....)))...(((......)))...)))))).....((((.(((((((...((..(((.....)))))....)))))))..(..(((((.....))))).....)..)))).....).).)))...)).)))))....)))))))...)).)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..))))).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..((((((((((((....((((((.((((..((....)).))))))))))...))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}............. E. coli 70S-TEC complex in delivery state; 16S ribosomal RNA 9gr1 a 2748 3.17 RF02540,RF02541,RF02543,RF00002 URS00026177A6_37762 39607923 0003735 0005840 469008 gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgaugaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguuauaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuaucauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacaucuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcgagcgaacggggagcagcccagagccugaaucaguguguguguuaguggaagcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaugcacaugcugugagcucgaugaguagggcgggacacgugguauccugucugaauauggggggaccauccuccaaggcuaaauacuccugacugaccgauagugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagugaaaaagaaccugaaaccguguacguacaagcagugggagcacagcugugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguagcaagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggcguuaaguugcaggguauagacccgaaacccggugaucuagccaugggcagguugaagguuggguaacacuaacuggaggaccgaaccgacuaaunungaaaaauuagcggaugacuuguggcugggggugaaaggccaaucaaaccgggagauagcugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccggggguagagcacuguuucggcaagggggucaucccgacuuaccaacccgaugcaaacugcgaauaccggagaauguuaucacgggagacacacggcgggugcuaacguccgucgugaagagggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagugggaaacgaugugggaaggcccagacagcgucgagucggccugcgcggaagauguaacggggcuaaaccaugcaccgaagcugcggcagcgacgcgcguuguuggguaggggagcguucuguaagccugugaaggugugcugugaggcaugcuggagguaucagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccgcucgccggaagaccaaggguuccuguccaacguuaaucggggcagggugagucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguuaauauuccuguacuugguguuacugcgaaggggggacggagaaggcuauguuggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccaggcaaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcugaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaacaucaaaucguaccccaaaccgacacngguggucagguagagaauaccaaggcgcuugagagaacucgggugaaggaacuaggcaaaauggugccguaacuucgggagaaggcacgcugauauguaggugaggucccucgcggauggagcugaaaucagucgaagauaccagcuggcugcaacuguuuauuaaaaacacagcacugugcaaacacgaaaguggacguauacggugugacgccuncccggugccggaagguuaauugaugggguuagcggcgcgaagcucuugaucgaagccccgguaaacggcggccguaacnauaacgguccuaagguagcgaaanuccuugucggguaaguuccgacnugcacgaauggcguaaugauggccaggcugucuccacccgagacucagugaaauugaacucgcugugnagaugcaguguacccgcggcaagacggaaagaccccgunaaccuuuacuauagcuugacacugaacauauguucuaacguuggccccugaucgggguugcggacagugucugguggguaguuugacugnggcggucuccuccuaaagaguaacggaggagcacgaagguuggcuaauccuggucggacaucaggagguuagugcaauggcauaagccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucauagugauccggugguucugaauggaagggccaucgcucaacggauaaaagguacuccgngganaacaggcugauaccgcccaagaguucauaucgacggcgguguuuggcancucgnugucggcucaucacauccuggggcugaaguaggucccaaggguauggcnguucgccauuuaaagugguacgcgagcuggguuuagaacgucgugagacaguucggucccuaucugccgugggcgcuggagaacugaggggggcugcuccuaguacgagaggaccggaguggacgcaucacugguguucggguugucaugccaauggcacugcccgguagcuaaaugcggaagagauaagugcugaaagcaucuaagcacgaaacuugccccgagaugaguucucccugacuccuugagaguccugaaggaacguugaagacgacgacguugauaggccggguguguaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuuaaccu <<<<<<<<......<<<<<<<<<<<.....[[..[[<<<<<<<[[<<......<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>......>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.<<<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<<....>>......>>>>>.>.........<<....>>..<<<<<<.....<<.....>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<...<<<<<......>>>>>((......<<<.....))>>>...>>>...>>>>>>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>......<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]...............<<....>>....]].........<<<<.....>>>>..................>>>>>>>>>>>.......<<<<..<<<<<..>>>>>..>>>>...<............>.<<<<<<....<<<<<<<<<<<<<..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>>.....>>>>>>>>>>>>>..<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<.<<<<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<<<<....<<<<<....>>>>>.<<<<<<<<...<<<<<<<<<.....<<<...<<<.<<<<...<<.<<<<.....>>>>..>>...>>>>.>>>..>>.>.....>>>>>>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>....<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...........<<..<<<<<..<<........<..>....>>..>>>>>.>>...........))).....>>>>>>.>>>...>>>>>>><<<<<<<<..>>>>>>>>....>>>>>>..<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>..>>>>>........>>>>>><......<<.....<<<<<<.......>>>>>><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<.<<<...<<<...<<<....>>>...>>>...>>>..<<<<<........>>>>>))<<<<<<<<<<<<<...<<<<....<<<<..<<<..<<<<<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<<.....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>>...>>>>>>...>>>...>>>>.........>>>>...>>....>>>>>>>>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<....<<<<<<<<.<<...............<<<<<...............>>>>><<<<<<.....<<<...<<<<.....>>>>...>>>...>>>>>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>>>>.<<<<<.<<<..<<<<<<<..<<<<...<...<<<<<..<<<.>>>...>>>>>..>....>>>>>>>>>..>>>>><<<<<<.......>>>>>>........<...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<.(((.[[......<<<<.[[<<<<..<<<<<.<<<.<<<<<.<<<<<..>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))).......<<<<<<<.((..>>>>..))>>>>>>>.............>>>>..]]>>>>.......<<<<...<<<<<<...<<.......>>...>>>>>>....>>>.>.......<<<<<.<<<<<<..<<<<<<<<<......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....]]..)))>>>>>>>>....<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<<<<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.......>>>>>>>..<<<<<.....>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<....<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>>>>>>. ((((((((......((((((((((.....(((..(((((((((((((......((((((.[..[[[.))).....((((((...(((]]]..].))).......))))))...)))....(((....)))(((((((....))))))).(((((((((.........))))))))).))...((((((.....(...[..)......))))).).........((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((...(((((......)))))[[(...).(((.....]])))...)))...)))))))))))))...))))...)....((((((((..[......))))))))......(((((].[[[[)))))..)))......)).))))))).))...............((....))....))......(..((((.....))))............)).....)))))))))).....(.((((..(((((())))))..)))).[.(.(........).).((((((....(((((((((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))))))))..((.(...((((((.....((((((((((.((((...((((((......))))))...)[)))...(((.(((((.......<))))))))..).))))))))).(.(((.....)))...)..))))))......).))..((((((....(((((....))))).((((((((..((((((((((.....(((...(((.((((...(((((((.....))))).))...)))).)))..)).).....)))))).)))..)))))))).)...(((((((((........)))))))))....(((......)))...((((.(((...((([[[...(.((((((.....(.....((..(((((..(((.....{.(())...)))..))))).))...........]]].)...))))))))))...)))))))((((((((()))))))))....))))))(.(((((...(((......((((((((....))))))))...)))..)))))..).....))))))(......((.....((((((.......))))))((((....((((..((..(((((((...((.....)).))))))....[[(((.(((.(.(((...(((....)))...)))..))))..(((((........)))))]](((((((((((((...((((....((((..(((..((((((((((((...{{{.).))))))((..((((...((((((((((((.((.....))))))))))..))))..[))))...))(..(((((....)))))...))))))...)))...))))(..).....))))...))....))))))))))).))).))).....((......)).)))).((((.....))))..))))..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((...((((....]))))...)))...))))))(...).......(((((((((.].((.........))...(((((((.....(((....))).......))))))).}((((.(((..(((((((..(((........(((((..(((.)))...)))))........))))))))..)))))(((((.........)))))........((..........(((((.......)))))..)..)....))))...)).))))))).)..))).)))))))).)))))).....)).{..(((((.....]}.)))))..((((((((.(((.((......((((.((((((..(((((.(((.(((((.(((((())))))...(((.((((((.....)))))))))....))))).)))..)))))..(((......[)))((((((..........]))))))([((...(((((((.(.(((((.........)))))...).((][.[[[))....)))))))...((((..((((..{.))))..)))).(((....))).))]]].].....(((((((.((..]]]]..))))))))).....)}......))))..))))))......((((..(.((((((...((.......))...))))))...).)).).).....((.((.((((((..(((((((((......))))))..))).(((((.....))))).....)))))..)...))..))....(..((((....))).)..)..>.))..)))))))))))[...(((((((...((((..(((((((.....(....)....))))))).(((((...((((...(((((((((((}}}.))))))..)))))...)))).)))))...(((....((((.....}.......))))....))).))))..]....)))))))(.(((((.....)))))(....((..(((((.......)))))....((((((((..((....(((((....)))))...))...))))).))).....))..).))))))))). E. coli 70S-TEC complex in delivery state; 23S ribosomal RNA 9gr1 b 119 3.17 RF00001 39607923 0003735 0005840 469008 ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacucagaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgagaguagggaacugccaggca <<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>.......>>...>>>>>>>>>> ((((((((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......((((((((...)))))))).......))...)))))))))) E. coli 70S-TEC complex in delivery state; 5S ribosomal RNA 9is7 A 123 2.87 39890981 2895524 agcaggcgccaccugcugcggaaccgcugaagccgcgugccucuaacagggcuggcgcggcuacgaagggcgcugggggugggaaccaccuccuucgacccaauccauggccacgacaaggag <<<<<<.....>>>>>>...........<.<<<<<<<<<<<<......>>>>..>>>>>>>>.>...<<<<<..<<<<<<<<...>>>>>>>>..>>.>>>......<<<>>>.......... ((((((.....))))))...........(.((((((((((((......))))..)))))))).)...(((((..((((((((...))))))))..)).)))......((())).......... Paracandidimonas lactea CP group II intron 2S state; RNA (153-MER) 9is7 B 582 2.87 39890981 2895524 gggcgacuacgaaacgggccuggguaggaaaugacccagugacccugacaguuugggaaagucggugaaagcccgacccucggggccuagcgaaagugggcgacgagugcaacaccuggaggcugagggcgucagugauggcgucaggcaugcgggagaaaucuaggcaugcuggcaccuaucgaaagauggggccgcuggauagcucaaucagguaaaggcaccguucaggugcuguguugaggcauaggaaggcagggccgcagucgcgguaagcaagcagcguugaagcgcaucggcaguaccgcauccguuauggaaccuugggagcgagaaacccuggaaacggggguagggucagagaccuagauaaauccgauguggccgagcuggcugucguucgaugccguaguacugacugucuaaguagggaaggucucggcagaucguggggguggcacccugcgaaauuaucugccaagacugggagauggcuugaguagugccgccgcgcgagcggugggcagaccaugggggcagacuugcuggauguuccuaucggcgaaagagccaagcgguaac ..((..<<<<.....<<<<<<<<<<........>>>>>>.>.>>>.<<<<<<<.<<....<<<<<.......>>>>>.<<<<..<<<<.<<....>>>>>>..>>>>..<<<<<<<<<<...<.<..<<<<<<<....>>>>>>>.<<<<<<<.<<<....>>>..>>>>>>><<<.<<<<<<....>>>>>>>>>.>.>....))....>>>>>....<<<<<<.....>>>>>>.>>>>>.<<<<<.<<<.<<<<<.<<<<......>>>>.((((((<<<<......<<<<<<<<<......<<<.<<<..............>>>>>>.....<<<<......>>>>...<<<<<...>>>>>........>>>>>>>.>>...>>>>.>>>>>.>>>.>>>>>......>>>>>>>>>...>>>>....<<<<<.<<<<<<<.<<<<<<......>>>>>>......>>>>>>>.>>>>>......<<<<<<.....<<<<<<<<<<....>>>>>.>>>>..<<.<<<<<<<<..))))))...>>>>>>>>..>>>....>>>>>>......... ..[[..((((.....((((((((((........)))))).).))).(((((((.((....(((((.......)))))(((((..((((.((....))))))..)))).)((((((((((...(.(..(((((((....)))))))...((((..(((....)))...))))..(((.((((((....))))))))).).)....]]....)))))....((((((.....)))))).))))).(((((.(((.(((((.(((........))).[[[[[[((((......(((((.(((......(((.(((..............)))))).....(((((....)))))...(((((...)))))........))).))).))...)))).))))).))).)))))......)))))))))...))))....(((((.(((((((((.((((......)))).)).....))))))).)))))......((((((.....((((((((((....))))).))))..((.((((((((..]]]]]]...))))))))..)))....))))))......... Paracandidimonas lactea CP group II intron 2S state; RNA (582-MER)