SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    21601 1i5b:B (1.94) BS02 ANP 2.7.13.3 GO:0016310 ... Q56310 11276258
    21602 1i5c:A (1.9) BS01 ADP 2.7.13.3 GO:0016310 ... Q56310 11276258
    21603 1i5c:B (1.9) BS01 ADP 2.7.13.3 GO:0016310 ... Q56310 11276258
    21604 1i5d:A (2.9) BS01 128 2.7.13.3 GO:0016310 ... Q56310 11276258
    21605 1i5e:A (3.0) BS01 U5P 2.4.2.9 GO:0000287 ... P70881 12037295
    21606 1i5e:B (3.0) BS01 U5P 2.4.2.9 GO:0000287 ... P70881 12037295
    21607 1i5g:A (1.4) BS01 TS5 1.8.1.8 GO:0004791 ... O77093 11347894
    21608 1i5h:W (-1.00) BS01 peptide 2.3.2.26 N/A Q62940 11323714
    21609 1i5k:A (2.7) BS01 peptide 3.4.21.7 N/A P00747 11350170
    21610 1i5k:A (2.7) BS02 peptide 3.4.21.7 N/A P00747 11350170
    21611 1i5k:B (2.7) BS01 peptide 3.4.21.7 N/A P00747 11350170
    21612 1i5k:B (2.7) BS02 peptide 3.4.21.7 N/A P00747 11350170
    21613 1i5l:A (2.75) BS01 URI ? GO:0003723 ... O29386 11331594
    21614 1i5l:B (2.75) BS01 URI ? GO:0003723 ... O29386 11331594
    21615 1i5l:B (2.75) BS02 URI ? GO:0003723 ... O29386 11331594
    21616 1i5l:C (2.75) BS01 URI ? GO:0003723 ... O29386 11331594
    21617 1i5l:E (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21618 1i5l:F (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21619 1i5l:G (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21620 1i5l:G (2.75) BS02 URI ? GO:0003723 ... O29386 11331594
    21621 1i5l:H (2.75) BS01 URI ? GO:0003723 ... O29386 11331594
    21622 1i5l:J (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21623 1i5l:K (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21624 1i5l:L (2.75) BS01 rna ? GO:0003723 ... O29386 11331594
    21625 1i5o:B (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 11323717
    21626 1i5o:B (2.8) BS02 PAL ? GO:0005515 ... P0A7F3 11323717
    21627 1i5o:D (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 11323717
    21628 1i5q:A (1.83) BS01 MOX 3.5.2.6 GO:0008800 ... P00811 11434768
    21629 1i5q:B (1.83) BS01 MOX 3.5.2.6 GO:0008800 ... P00811 11434768
    21630 1i5r:A (1.6) BS01 HYC 1.1.1.51
    1.1.1.62
    GO:0004303 ... P14061 12223444 MOAD: Ki=3nM
    BindingDB: IC50=52nM, Ki=3nM
    21631 1i5s:A (2.2) BS01 ADP ? GO:0003777 ... P33173 11373668
    21632 1i5t:A (-1.00) BS01 HEC ? GO:0005515 ... P00004 11941512
    21633 1i5u:A (-1.00) BS01 HEM ? GO:0020037 ... P00171 11714912
    21634 1i5z:A (1.9) BS01 CMP ? GO:0003677 ... P0ACJ8 N/A
    21635 1i5z:A (1.9) BS02 CMP ? GO:0003677 ... P0ACJ8 N/A
    21636 1i5z:B (1.9) BS01 CMP ? GO:0003677 ... P0ACJ8 N/A
    21637 1i6d:A (-1.00) BS01 HEC ? GO:0009055 ... P54820 11591150
    21638 1i6e:A (-1.00) BS01 HEC ? GO:0009055 ... P54820 11591150
    21639 1i6h:A (3.3) BS01 dna 2.7.7.6 GO:0001172 ... P04050 11313499
    21640 1i6h:A (3.3) BS02 rna 2.7.7.6 GO:0001172 ... P04050 11313499
    21641 1i6h:A (3.3) BS03 MG 2.7.7.6 GO:0001172 ... P04050 11313499
    21642 1i6h:A (3.3) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 11313499
    21643 1i6h:B (3.3) BS01 dna 2.7.7.6 GO:0001172 ... P08518 11313499
    21644 1i6h:B (3.3) BS02 rna 2.7.7.6 GO:0001172 ... P08518 11313499
    21645 1i6h:B (3.3) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 11313499
    21646 1i6h:C (3.3) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 11313499
    21647 1i6h:I (3.3) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 11313499
    21648 1i6h:I (3.3) BS02 ZN 2.7.7.6 GO:0001172 ... P27999 11313499
    21649 1i6h:J (3.3) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 11313499
    21650 1i6h:L (3.3) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 11313499
    21651 1i6i:A (2.0) BS01 ACP ? GO:0003777 ... P33173 11373668
    21652 1i6j:A (2.0) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 11526315
    21653 1i6j:A (2.0) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    N/A P03355 11526315
    21654 1i6k:A (1.72) BS01 TYM 6.1.1.2 GO:0000166 ... P00953 11679724
    21655 1i6l:A (1.72) BS01 TYM 6.1.1.2 GO:0000166 ... P00953 11679724
    21656 1i6m:A (1.72) BS01 TYM 6.1.1.2 GO:0000166 ... P00953 11679724
    21657 1i6n:A (1.8) BS01 ZN 5.3.99.11 N/A P42419 12112707
    21658 1i6o:A (2.2) BS01 ZN 4.2.1.1 GO:0004089 ... P61517 11316870
    21659 1i6o:B (2.2) BS01 ZN 4.2.1.1 GO:0004089 ... P61517 11316870
    21660 1i6p:A (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P61517 11316870
    21661 1i6q:A (2.7) BS01 FE 3.4.21.- GO:0001817 ... Q9TUM0 11473113
    21662 1i6q:A (2.7) BS02 FE 3.4.21.- GO:0001817 ... Q9TUM0 11473113
    21663 1i6t:A (1.2) BS01 CA 3.6.1.1 GO:0000287 ... P0A7A9 11846572
    21664 1i6t:A (1.2) BS02 CA 3.6.1.1 GO:0000287 ... P0A7A9 11846572
    21665 1i6t:A (1.2) BS03 POP 3.6.1.1 GO:0000287 ... P0A7A9 11846572
    21666 1i6u:A (2.6) BS01 rna ? GO:0003735 ... P54041 11478863
    21667 1i6u:B (2.6) BS01 rna ? GO:0003735 ... P54041 11478863
    21668 1i6u:B (2.6) BS02 rna ? GO:0003735 ... P54041 11478863
    21669 1i6v:C (3.3) BS01 RFP 2.7.7.6 GO:0003677 ... Q9KWU7 11290327
    21670 1i6v:D (3.3) BS01 MG 2.7.7.6 GO:0003677 ... Q9KWU6 11290327
    21671 1i6v:D (3.3) BS02 ZN 2.7.7.6 GO:0003677 ... Q9KWU6 11290327
    21672 1i6x:A (2.2) BS01 CMP ? GO:0003677 ... P0ACJ8 N/A
    21673 1i6x:A (2.2) BS02 CMP ? GO:0003677 ... P0ACJ8 N/A
    21674 1i6x:B (2.2) BS01 CMP ? GO:0003677 ... P0ACJ8 N/A
    21675 1i72:A (2.0) BS01 MAO 4.1.1.50 GO:0004014 ... P17707 11583147 BindingDB: IC50=55nM
    21676 1i72:A (2.0) BS02 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21677 1i72:B (2.0) BS01 MAO 4.1.1.50 GO:0004014 ... P17707 11583147 BindingDB: IC50=55nM
    21678 1i73:A (1.4) BS01 peptide 3.4.24.34 GO:0004222 ... P22894 10978185
    21679 1i73:A (1.4) BS02 CA 3.4.24.34 GO:0004222 ... P22894 10978185
    21680 1i73:A (1.4) BS03 CA 3.4.24.34 GO:0004222 ... P22894 10978185
    21681 1i73:A (1.4) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 10978185
    21682 1i73:A (1.4) BS05 ZN 3.4.24.34 GO:0004222 ... P22894 10978185
    21683 1i74:A (2.2) BS01 MN 3.6.1.1 GO:0004427 ... O68579 11525166
    21684 1i74:A (2.2) BS02 MN 3.6.1.1 GO:0004427 ... O68579 11525166
    21685 1i74:A (2.2) BS03 SO4 3.6.1.1 GO:0004427 ... O68579 11525166
    21686 1i74:A (2.2) BS04 SO4 3.6.1.1 GO:0004427 ... O68579 11525166
    21687 1i74:B (2.2) BS01 MN 3.6.1.1 GO:0004427 ... O68579 11525166
    21688 1i74:B (2.2) BS02 MN 3.6.1.1 GO:0004427 ... O68579 11525166
    21689 1i74:B (2.2) BS03 SO4 3.6.1.1 GO:0004427 ... O68579 11525166
    21690 1i75:A (2.0) BS01 CA 2.4.1.19 GO:0003824 ... P05618 11275559
    21691 1i75:A (2.0) BS02 CA 2.4.1.19 GO:0003824 ... P05618 11275559
    21692 1i75:A (2.0) BS03 NOJ 2.4.1.19 GO:0003824 ... P05618 11275559
    21693 1i75:A (2.0) BS04 NOJ 2.4.1.19 GO:0003824 ... P05618 11275559
    21694 1i75:B (2.0) BS01 CA 2.4.1.19 GO:0003824 ... P05618 11275559
    21695 1i75:B (2.0) BS02 CA 2.4.1.19 GO:0003824 ... P05618 11275559
    21696 1i75:B (2.0) BS03 NOJ 2.4.1.19 GO:0003824 ... P05618 11275559
    21697 1i75:B (2.0) BS04 NOJ 2.4.1.19 GO:0003824 ... P05618 11275559
    21698 1i76:A (1.2) BS01 CA 3.4.24.34 GO:0004222 ... P22894 10978185
    21699 1i76:A (1.2) BS02 CA 3.4.24.34 GO:0004222 ... P22894 10978185
    21700 1i76:A (1.2) BS03 ZN 3.4.24.34 GO:0004222 ... P22894 10978185
    21701 1i76:A (1.2) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 10978185
    21702 1i76:A (1.2) BS05 BSI 3.4.24.34 GO:0004222 ... P22894 10978185
    21703 1i77:A (1.95) BS01 HEM ? GO:0009055 ... Q9L915 11358521
    21704 1i77:A (1.95) BS02 HEM ? GO:0009055 ... Q9L915 11358521
    21705 1i77:A (1.95) BS03 HEM ? GO:0009055 ... Q9L915 11358521
    21706 1i77:A (1.95) BS04 HEM ? GO:0009055 ... Q9L915 11358521
    21707 1i79:A (2.01) BS01 MHZ 4.1.1.50 GO:0004014 ... P17707 11583147
    21708 1i79:A (2.01) BS02 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21709 1i79:B (2.01) BS01 MHZ 4.1.1.50 GO:0004014 ... P17707 11583147
    21710 1i7a:A (2.24) BS01 peptide ? GO:0007216 ... Q9QWW1 11491285
    21711 1i7a:B (2.24) BS01 peptide ? GO:0007216 ... Q9QWW1 11491285
    21712 1i7a:D (2.24) BS01 PHE ? GO:0007216 ... Q9QWW1 11491285
    21713 1i7b:A (1.9) BS01 SMM 4.1.1.50 GO:0004014 ... P17707 11583147
    21714 1i7b:A (1.9) BS02 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21715 1i7b:B (1.9) BS01 SMM 4.1.1.50 GO:0004014 ... P17707 11583147
    21716 1i7c:A (2.4) BS01 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21717 1i7c:A (2.4) BS02 MGB 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.4uM
    21718 1i7c:B (2.4) BS01 MGB 4.1.1.50 GO:0004014 ... P17707 11583147
    21719 1i7d:A (2.05) BS01 dna 5.6.2.1 GO:0000287 ... P14294 11429611
    21720 1i7e:A (1.95) BS01 IBS ? N/A P50586 11375483
    21721 1i7g:A (2.2) BS01 AZ2 ? GO:0003677 ... Q07869 11587644 MOAD: ic50=1uM
    BindingDB: EC50=820nM, Ki=1000nM
    21722 1i7g:A (2.2) BS02 CPQ ? GO:0003677 ... Q07869 11587644
    21723 1i7h:A (1.7) BS01 FES ? GO:0005515 ... P0A9R4 11551196
    21724 1i7h:B (1.7) BS01 FES ? GO:0005515 ... P0A9R4 11551196
    21725 1i7h:C (1.7) BS01 FES ? GO:0005515 ... P0A9R4 11551196
    21726 1i7i:A (2.35) BS01 AZ2 ? GO:0003677 ... P37231 11587644 BindingDB: EC50=704nM, Ki=18nM
    21727 1i7i:B (2.35) BS01 AZ2 ? GO:0003677 ... P37231 11587644 BindingDB: EC50=704nM, Ki=18nM
    21728 1i7l:A (2.35) BS01 ATP ? GO:0005524 ... Q63537 N/A
    21729 1i7l:B (2.35) BS01 ATP ? GO:0005524 ... Q63537 N/A
    21730 1i7m:A (2.24) BS01 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21731 1i7m:A (2.24) BS02 CG 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.23nM
    21732 1i7m:B (2.24) BS01 CG 4.1.1.50 GO:0004014 ... P17707 11583147
    21733 1i7m:C (2.24) BS01 PUT 4.1.1.50 GO:0004014 ... P17707 11583147
    21734 1i7m:C (2.24) BS02 CG 4.1.1.50 GO:0004014 ... P17707 11583147
    21735 1i7m:D (2.24) BS01 CG 4.1.1.50 GO:0004014 ... P17707 11583147 MOAD: ic50=0.23nM
    21736 1i7o:A (1.7) BS01 CA 4.1.1.68
    5.3.3.10
    GO:0003824 ... P37352 N/A
    21737 1i7o:B (1.7) BS01 CA 4.1.1.68
    5.3.3.10
    GO:0003824 ... P37352 N/A
    21738 1i7o:C (1.7) BS01 CA 4.1.1.68
    5.3.3.10
    GO:0003824 ... P37352 N/A
    21739 1i7o:D (1.7) BS01 CA 4.1.1.68
    5.3.3.10
    GO:0003824 ... P37352 N/A
    21740 1i7p:A (2.0) BS01 FAD 1.6.2.2 GO:0016491 ... P20070 11695905
    21741 1i7q:A (1.95) BS01 MG 4.1.3.27 GO:0000162 ... P00897 11371633
    21742 1i7q:A (1.95) BS02 PYR 4.1.3.27 GO:0000162 ... P00897 11371633
    21743 1i7q:B (1.95) BS01 GLU 4.1.3.27 GO:0000162 ... P00900 11371633
    21744 1i7q:C (1.95) BS01 MG 4.1.3.27 GO:0000162 ... P00897 11371633
    21745 1i7q:C (1.95) BS02 PYR 4.1.3.27 GO:0000162 ... P00897 11371633
    21746 1i7q:D (1.95) BS01 GLU 4.1.3.27 GO:0000162 ... P00900 11371633
    21747 1i7r:A (2.2) BS01 peptide ? N/A P04439 11584024
    21748 1i7r:D (2.2) BS01 peptide ? N/A P04439 11584024
    21749 1i7s:A (2.4) BS01 TRP 4.1.3.27 GO:0000162 ... P00897 11371633
    21750 1i7s:C (2.4) BS01 TRP 4.1.3.27 GO:0000162 ... P00897 11371633
    21751 1i7t:A (2.8) BS01 peptide ? N/A P04439 11584024
    21752 1i7t:D (2.8) BS01 peptide ? N/A P04439 11584024
    21753 1i7u:A (1.8) BS01 peptide ? N/A P04439 11584024
    21754 1i7u:D (1.8) BS01 peptide ? N/A P04439 11584024
    21755 1i7w:A (2.0) BS01 ZN ? GO:0007155 ... Q02248 11348595
    21756 1i7w:C (2.0) BS01 ZN ? GO:0007155 ... Q02248 11348595
    21757 1i7y:A (2.5) BS01 CYC ? GO:0015979 ... Q9AM02 11601847
    21758 1i7y:B (2.5) BS01 CYC ? GO:0015979 ... P50033 11601847
    21759 1i7y:B (2.5) BS02 CYC ? GO:0015979 ... P50033 11601847
    21760 1i7z:A (2.3) BS01 COC ? GO:0002250 ... P01834 11469854 MOAD: Kd=0.4uM
    21761 1i7z:B (2.3) BS01 COC ? N/A P01857 11469854
    21762 1i7z:C (2.3) BS01 COC ? GO:0002250 ... P01834 11469854 MOAD: Kd=0.4uM
    21763 1i7z:D (2.3) BS01 COC ? N/A P01857 11469854
    21764 1i80:A (2.0) BS01 PO4 2.4.2.1 GO:0003824 ... P9WP01 11444966
    21765 1i80:A (2.0) BS02 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    21766 1i80:A (2.0) BS03 IMR 2.4.2.1 GO:0003824 ... P9WP01 11444966
    21767 1i80:B (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    21768 1i80:C (2.0) BS01 9HX 2.4.2.1 GO:0003824 ... P9WP01 11444966 MOAD: Kd=0.39uM
    21769 1i82:A (1.9) BS01 BGC 3.2.1.8 GO:0004553 ... Q60037 11371186
    21770 1i82:A (1.9) BS02 BGC 3.2.1.8 GO:0004553 ... Q60037 11371186
    21771 1i82:A (1.9) BS03 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21772 1i82:A (1.9) BS04 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21773 1i82:A (1.9) BS05 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21774 1i83:A (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331290
    21775 1i83:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331290
    21776 1i83:A (2.0) BS03 NTU 1.14.13.39 GO:0004517 ... P29473 11331290
    21777 1i83:B (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331290
    21778 1i83:B (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331290
    21779 1i83:B (2.0) BS03 NTU 1.14.13.39 GO:0004517 ... P29473 11331290
    21780 1i8a:A (1.9) BS01 BGC 3.2.1.8 GO:0004553 ... Q60037 11371186
    21781 1i8a:A (1.9) BS02 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21782 1i8a:A (1.9) BS03 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21783 1i8a:A (1.9) BS04 CA 3.2.1.8 GO:0004553 ... Q60037 11371186
    21784 1i8g:B (-1.00) BS01 peptide 5.2.1.8 N/A Q13526 11313338
    21785 1i8h:B (-1.00) BS01 peptide 5.2.1.8 N/A Q13526 11313338
    21786 1i8i:A (2.4) BS01 peptide ? GO:0005576 ... P01660 11352579
    21787 1i8i:B (2.4) BS01 peptide ? GO:0003823 ... P18529 11352579
    21788 1i8j:A (1.9) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11444968
    21789 1i8j:A (1.9) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11444968
    21790 1i8j:B (1.9) BS01 ZN 4.2.1.24 GO:0000287 ... P0ACB2 11444968
    21791 1i8j:B (1.9) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11444968
    21792 1i8k:A (1.8) BS01 peptide ? GO:0005576 ... P01660 11352579
    21793 1i8k:B (1.8) BS01 peptide ? GO:0003823 ... P18529 11352579
    21794 1i8m:A (2.1) BS01 dna ? GO:0002250 ... P01837 11733999
    21795 1i8m:B (2.1) BS01 dna ? N/A Q924Q6 11733999
    21796 1i8m:B (2.1) BS02 dna ? N/A Q924Q6 11733999
    21797 1i8m:H (2.1) BS01 dna ? N/A Q924Q6 11733999
    21798 1i8m:L (2.1) BS01 dna ? GO:0002250 ... P01837 11733999
    21799 1i8n:A (2.2) BS01 ROP ? GO:0005576 ... Q01747 11468390
    21800 1i8n:B (2.2) BS01 ROP ? GO:0005576 ... Q01747 11468390

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).