SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    22001 1iav:A (1.8) BS02 CA 3.4.21.62 GO:0004252 ... P29600 10493860
    22002 1iaw:A (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22003 1iaw:A (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22004 1iaw:A (2.4) BS03 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22005 1iaw:A (2.4) BS04 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22006 1iaw:B (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22007 1iaw:B (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22008 1iaw:B (2.4) BS03 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22009 1iaw:B (2.4) BS04 dna 3.1.21.4 GO:0003677 ... P50187 11473254
    22010 1iax:A (2.8) BS01 PLP 4.4.1.14 GO:0003824 ... P18485 11431475
    22011 1iax:B (2.8) BS01 PLP 4.4.1.14 GO:0003824 ... P18485 11431475
    22012 1iay:A (2.7) BS01 PLP 4.4.1.14 GO:0003824 ... P18485 11431475
    22013 1iay:A (2.7) BS02 AVG 4.4.1.14 GO:0003824 ... P18485 11431475
    22014 1ib0:A (2.3) BS01 FAD 1.6.2.2 GO:0016491 ... P20070 11695905
    22015 1ib0:A (2.3) BS02 NAD 1.6.2.2 GO:0016491 ... P20070 11695905
    22016 1ib1:E (2.7) BS01 COT 2.3.1.87 GO:0004059 ... Q29495 11336675
    22017 1ib1:F (2.7) BS01 COT 2.3.1.87 GO:0004059 ... Q29495 11336675
    22018 1ib1:G (2.7) BS01 COT 2.3.1.87 GO:0004059 ... Q29495 11336675
    22019 1ib1:H (2.7) BS01 COT 2.3.1.87 GO:0004059 ... Q29495 11336675
    22020 1ib4:A (2.0) BS01 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22021 1ib4:A (2.0) BS02 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22022 1ib4:A (2.0) BS03 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22023 1ib4:A (2.0) BS04 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22024 1ib4:B (2.0) BS01 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22025 1ib4:B (2.0) BS02 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22026 1ib4:B (2.0) BS03 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22027 1ib4:B (2.0) BS04 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22028 1ib4:B (2.0) BS05 MAN 3.2.1.15 GO:0004650 ... O74213 11518536
    22029 1ib5:A (2.45) BS01 ZN 1.15.1.1 GO:0004784 ... P00446 11327787
    22030 1ib5:A (2.45) BS02 CU 1.15.1.1 GO:0004784 ... P00446 11327787
    22031 1ib6:A (2.1) BS01 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22032 1ib6:A (2.1) BS02 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22033 1ib6:A (2.1) BS03 NAD 1.1.1.37 GO:0003824 ... P61889 11389141
    22034 1ib6:C (2.1) BS01 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22035 1ib6:C (2.1) BS02 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22036 1ib6:C (2.1) BS03 NAD 1.1.1.37 GO:0003824 ... P61889 11389141
    22037 1ib6:D (2.1) BS01 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22038 1ib6:D (2.1) BS02 SO4 1.1.1.37 GO:0003824 ... P61889 11389141
    22039 1ib6:D (2.1) BS03 NAD 1.1.1.37 GO:0003824 ... P61889 11389141
    22040 1ib7:A (-1.00) BS01 HEM ? GO:0020037 ... P00173 N/A
    22041 1ibb:A (2.1) BS01 ZN 1.15.1.1 GO:0004784 ... P00446 11327787
    22042 1ibb:A (2.1) BS02 CU 1.15.1.1 GO:0004784 ... P00446 11327787
    22043 1ibc:A (2.73) BS01 peptide 3.4.22.36 GO:0004197 ... P29466 9190289
    22044 1ibc:B (2.73) BS01 peptide 3.4.22.36 GO:0004197 ... P29466 9190289
    22045 1ibd:A (2.0) BS01 ZN 1.15.1.1 GO:0004784 ... P00446 11327787
    22046 1ibd:A (2.0) BS02 CU 1.15.1.1 GO:0004784 ... P00446 11327787
    22047 1ibe:A (1.8) BS01 HEM ? GO:0005344 ... P01958 8980683
    22048 1ibe:B (1.8) BS01 HEM ? GO:0005344 ... P02062 8980683
    22049 1ibf:A (2.2) BS01 ZN 1.15.1.1 GO:0004784 ... P00446 11327787
    22050 1ibf:A (2.2) BS02 CU 1.15.1.1 GO:0004784 ... P00446 11327787
    22051 1ibg:H (2.7) BS01 OBN N/A N/A N/A 7739045
    22052 1ibg:L (2.7) BS01 OBN N/A N/A N/A 7739045
    22053 1ibh:A (2.0) BS01 ZN 1.15.1.1 GO:0004784 ... P00446 11327787
    22054 1ibh:A (2.0) BS02 CU 1.15.1.1 GO:0004784 ... P00446 11327787
    22055 1ibi:A (-1.00) BS01 ZN ? N/A Q05158 11583159
    22056 1ibi:A (-1.00) BS02 ZN ? N/A Q05158 11583159
    22057 1ibj:A (2.3) BS01 CO3 4.4.1.13 GO:0005737 ... P53780 11402193
    22058 1ibj:A (2.3) BS02 PLP 4.4.1.13 GO:0005737 ... P53780 11402193
    22059 1ibj:A (2.3) BS03 PLP 4.4.1.13 GO:0005737 ... P53780 11402193
    22060 1ibj:C (2.3) BS01 PLP 4.4.1.13 GO:0005737 ... P53780 11402193
    22061 1ibj:C (2.3) BS02 CO3 4.4.1.13 GO:0005737 ... P53780 11402193
    22062 1ibj:C (2.3) BS03 PLP 4.4.1.13 GO:0005737 ... P53780 11402193
    22063 1ibk:B (3.31) BS01 rna ? GO:0003735 ... P80371 11340196
    22064 1ibk:C (3.31) BS01 rna ? GO:0003676 ... P80372 11340196
    22065 1ibk:D (3.31) BS01 rna ? GO:0003723 ... P80373 11340196
    22066 1ibk:D (3.31) BS02 MG ? GO:0003723 ... P80373 11340196
    22067 1ibk:D (3.31) BS03 ZN ? GO:0003723 ... P80373 11340196
    22068 1ibk:E (3.31) BS01 rna ? GO:0003723 ... Q5SHQ5 11340196
    22069 1ibk:F (3.31) BS01 rna ? GO:0003735 ... Q5SLP8 11340196
    22070 1ibk:G (3.31) BS01 rna ? GO:0000049 ... P17291 11340196
    22071 1ibk:H (3.31) BS01 rna ? GO:0003735 ... P0DOY9 11340196
    22072 1ibk:I (3.31) BS01 rna ? GO:0003723 ... P80374 11340196
    22073 1ibk:J (3.31) BS01 rna ? GO:0000049 ... Q5SHN7 11340196
    22074 1ibk:K (3.31) BS01 rna ? GO:0003735 ... P80376 11340196
    22075 1ibk:L (3.31) BS01 rna ? GO:0000049 ... Q5SHN3 11340196
    22076 1ibk:M (3.31) BS01 rna ? GO:0000049 ... P80377 11340196
    22077 1ibk:N (3.31) BS01 rna ? GO:0003735 ... P0DOY6 11340196
    22078 1ibk:N (3.31) BS02 ZN ? GO:0003735 ... P0DOY6 11340196
    22079 1ibk:O (3.31) BS01 rna ? GO:0003735 ... Q5SJ76 11340196
    22080 1ibk:P (3.31) BS01 rna ? GO:0003735 ... Q5SJH3 11340196
    22081 1ibk:Q (3.31) BS01 rna ? GO:0003735 ... P0DOY7 11340196
    22082 1ibk:R (3.31) BS01 rna ? GO:0003735 ... Q5SLQ0 11340196
    22083 1ibk:S (3.31) BS01 rna ? GO:0000028 ... Q5SHP2 11340196
    22084 1ibk:T (3.31) BS01 rna ? GO:0003723 ... P80380 11340196
    22085 1ibl:B (3.11) BS01 rna ? GO:0003735 ... P80371 11340196
    22086 1ibl:C (3.11) BS01 rna ? GO:0003676 ... P80372 11340196
    22087 1ibl:D (3.11) BS01 rna ? GO:0003723 ... P80373 11340196
    22088 1ibl:D (3.11) BS02 MG ? GO:0003723 ... P80373 11340196
    22089 1ibl:D (3.11) BS03 ZN ? GO:0003723 ... P80373 11340196
    22090 1ibl:E (3.11) BS01 rna ? GO:0003723 ... Q5SHQ5 11340196
    22091 1ibl:F (3.11) BS01 rna ? GO:0003735 ... Q5SLP8 11340196
    22092 1ibl:G (3.11) BS01 rna ? GO:0000049 ... P17291 11340196
    22093 1ibl:H (3.11) BS01 rna ? GO:0003735 ... P0DOY9 11340196
    22094 1ibl:I (3.11) BS01 rna ? GO:0003723 ... P80374 11340196
    22095 1ibl:J (3.11) BS01 rna ? GO:0000049 ... Q5SHN7 11340196
    22096 1ibl:J (3.11) BS02 MG ? GO:0000049 ... Q5SHN7 11340196
    22097 1ibl:K (3.11) BS01 rna ? GO:0003735 ... P80376 11340196
    22098 1ibl:L (3.11) BS01 rna ? GO:0000049 ... Q5SHN3 11340196
    22099 1ibl:L (3.11) BS02 MG ? GO:0000049 ... Q5SHN3 11340196
    22100 1ibl:M (3.11) BS01 rna ? GO:0000049 ... P80377 11340196
    22101 1ibl:N (3.11) BS01 rna ? GO:0003735 ... P0DOY6 11340196
    22102 1ibl:N (3.11) BS02 ZN ? GO:0003735 ... P0DOY6 11340196
    22103 1ibl:O (3.11) BS01 rna ? GO:0003735 ... Q5SJ76 11340196
    22104 1ibl:P (3.11) BS01 rna ? GO:0003735 ... Q5SJH3 11340196
    22105 1ibl:Q (3.11) BS01 rna ? GO:0003735 ... P0DOY7 11340196
    22106 1ibl:R (3.11) BS01 rna ? GO:0003735 ... Q5SLQ0 11340196
    22107 1ibl:S (3.11) BS01 rna ? GO:0000028 ... Q5SHP2 11340196
    22108 1ibl:T (3.11) BS01 rna ? GO:0003723 ... P80380 11340196
    22109 1ibm:B (3.31) BS01 rna ? GO:0003735 ... P80371 11340196
    22110 1ibm:C (3.31) BS01 rna ? GO:0003676 ... P80372 11340196
    22111 1ibm:D (3.31) BS01 rna ? GO:0003723 ... P80373 11340196
    22112 1ibm:D (3.31) BS02 MG ? GO:0003723 ... P80373 11340196
    22113 1ibm:E (3.31) BS01 rna ? GO:0003723 ... Q5SHQ5 11340196
    22114 1ibm:F (3.31) BS01 rna ? GO:0003735 ... Q5SLP8 11340196
    22115 1ibm:G (3.31) BS01 rna ? GO:0000049 ... P17291 11340196
    22116 1ibm:H (3.31) BS01 rna ? GO:0003735 ... P0DOY9 11340196
    22117 1ibm:I (3.31) BS01 rna ? GO:0003723 ... P80374 11340196
    22118 1ibm:J (3.31) BS01 rna ? GO:0000049 ... Q5SHN7 11340196
    22119 1ibm:K (3.31) BS01 rna ? GO:0003735 ... P80376 11340196
    22120 1ibm:L (3.31) BS01 rna ? GO:0000049 ... Q5SHN3 11340196
    22121 1ibm:L (3.31) BS02 MG ? GO:0000049 ... Q5SHN3 11340196
    22122 1ibm:M (3.31) BS01 rna ? GO:0000049 ... P80377 11340196
    22123 1ibm:N (3.31) BS01 rna ? GO:0003735 ... P0DOY6 11340196
    22124 1ibm:N (3.31) BS02 ZN ? GO:0003735 ... P0DOY6 11340196
    22125 1ibm:O (3.31) BS01 rna ? GO:0003735 ... Q5SJ76 11340196
    22126 1ibm:P (3.31) BS01 rna ? GO:0003735 ... Q5SJH3 11340196
    22127 1ibm:Q (3.31) BS01 rna ? GO:0003735 ... P0DOY7 11340196
    22128 1ibm:R (3.31) BS01 rna ? GO:0003735 ... Q5SLQ0 11340196
    22129 1ibm:S (3.31) BS01 rna ? GO:0000028 ... Q5SHP2 11340196
    22130 1ibm:T (3.31) BS01 rna ? GO:0003723 ... P80380 11340196
    22131 1ibq:A (2.14) BS01 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22132 1ibq:A (2.14) BS02 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22133 1ibq:A (2.14) BS03 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22134 1ibq:B (2.14) BS01 MAN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22135 1ibq:B (2.14) BS02 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22136 1ibq:B (2.14) BS03 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22137 1ibq:B (2.14) BS04 ZN 3.4.23.18 GO:0004190 ... Q12567 11418762
    22138 1ibr:A (2.3) BS01 MG 3.6.5.- GO:0000054 ... P62826 10367892
    22139 1ibr:A (2.3) BS02 GNP 3.6.5.- GO:0000054 ... P62826 10367892
    22140 1ibr:C (2.3) BS01 MG 3.6.5.- GO:0000054 ... P62826 10367892
    22141 1ibr:C (2.3) BS02 GNP 3.6.5.- GO:0000054 ... P62826 10367892
    22142 1ibs:A (2.8) BS01 SO4 2.7.6.1 GO:0000287 ... P14193 11790837
    22143 1ibs:A (2.8) BS02 ABM 2.7.6.1 GO:0000287 ... P14193 11790837
    22144 1ibs:B (2.8) BS01 ABM 2.7.6.1 GO:0000287 ... P14193 11790837
    22145 1ibw:A (3.2) BS01 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22146 1ibw:B (3.2) BS01 PYR 4.1.1.22 GO:0004398 ... P00862 11835507
    22147 1ibw:B (3.2) BS02 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22148 1ibw:C (3.2) BS01 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22149 1ibw:D (3.2) BS01 PYR 4.1.1.22 GO:0004398 ... P00862 11835507
    22150 1ibw:D (3.2) BS02 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22151 1ibw:E (3.2) BS01 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22152 1ibw:F (3.2) BS01 PYR 4.1.1.22 GO:0004398 ... P00862 11835507
    22153 1ibw:F (3.2) BS02 PVH 4.1.1.22 GO:0004398 ... P00862 11835507
    22154 1iby:A (1.65) BS01 CU ? N/A Q820S6 11341832
    22155 1iby:B (1.65) BS01 CU ? N/A Q820S6 11341832
    22156 1iby:C (1.65) BS01 CU ? N/A Q820S6 11341832
    22157 1iby:D (1.65) BS01 CU ? N/A Q820S6 11341832
    22158 1ibz:A (2.3) BS01 CU ? N/A Q820S6 11341832
    22159 1ibz:B (2.3) BS01 CU ? N/A Q820S6 11341832
    22160 1ibz:C (2.3) BS01 CU ? N/A Q820S6 11341832
    22161 1ibz:D (2.3) BS01 CU ? N/A Q820S6 11341832
    22162 1ic0:A (2.1) BS01 CU ? N/A Q820S6 11341832
    22163 1ic0:B (2.1) BS01 CU ? N/A Q820S6 11341832
    22164 1ic0:C (2.1) BS01 CU ? N/A Q820S6 11341832
    22165 1ic0:D (2.1) BS01 CU ? N/A Q820S6 11341832
    22166 1ic0:E (2.1) BS01 CU ? N/A Q820S6 11341832
    22167 1ic0:F (2.1) BS01 CU ? N/A Q820S6 11341832
    22168 1ic6:A (0.98) BS01 CA 3.4.21.64 GO:0004252 ... P06873 11258922
    22169 1ic6:A (0.98) BS02 CA 3.4.21.64 GO:0004252 ... P06873 11258922
    22170 1ic8:A (2.6) BS01 dna ? GO:0001889 ... P20823 12453420
    22171 1ic8:A (2.6) BS02 dna ? GO:0001889 ... P20823 12453420
    22172 1ic8:B (2.6) BS01 dna ? GO:0001889 ... P20823 12453420
    22173 1ic8:B (2.6) BS02 dna ? GO:0001889 ... P20823 12453420
    22174 1icc:A (2.0) BS01 HEM ? GO:0020037 ... P04166 11583146
    22175 1icc:B (2.0) BS01 HEM ? GO:0020037 ... P04166 11583146
    22176 1icc:C (2.0) BS01 HEM ? GO:0020037 ... P04166 11583146
    22177 1icc:D (2.0) BS01 HEM ? GO:0020037 ... P04166 11583146
    22178 1ice:A (2.6) BS01 peptide 3.4.22.36 GO:0004197 ... P29466 8035875
    22179 1ice:B (2.6) BS01 peptide 3.4.22.36 GO:0004197 ... P29466 8035875
    22180 1ici:A (2.1) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 11336676
    22181 1ici:A (2.1) BS02 NAD 2.3.1.286 GO:0005737 ... O28597 11336676
    22182 1ici:B (2.1) BS01 ZN 2.3.1.286 GO:0005737 ... O28597 11336676
    22183 1ici:B (2.1) BS02 NAD 2.3.1.286 GO:0005737 ... O28597 11336676
    22184 1icp:A (1.9) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22185 1icp:B (1.9) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22186 1icq:A (2.0) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22187 1icq:A (2.0) BS02 OPD 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22188 1icq:B (2.0) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22189 1icq:B (2.0) BS02 OPD 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22190 1icr:A (1.7) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22191 1icr:A (1.7) BS02 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22192 1icr:A (1.7) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22193 1icr:B (1.7) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22194 1icr:B (1.7) BS02 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22195 1icr:B (1.7) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 11491290
    22196 1ics:A (2.3) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22197 1ics:B (2.3) BS01 FMN 1.3.1.42 GO:0005737 ... Q9XG54 11377202
    22198 1ict:A (3.0) BS01 T44 ? GO:0001523 ... P02766 11418763 BindingDB: IC50=10500nM
    22199 1ict:B (3.0) BS01 T44 ? GO:0001523 ... P02766 11418763 BindingDB: IC50=10500nM
    22200 1ict:C (3.0) BS01 T44 ? GO:0001523 ... P02766 11418763 BindingDB: IC50=10500nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).