SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    221801 4ezv:A (2.1) BS02 peptide ? GO:0005524 ... P0A6Y8 N/A
    221802 4ezv:B (2.1) BS01 peptide ? GO:0005524 ... P0A6Y8 N/A
    221803 4ezv:B (2.1) BS02 peptide ? GO:0005524 ... P0A6Y8 N/A
    221804 4ezw:A (1.8) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221805 4ezw:B (1.8) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221806 4ezw:C (1.8) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221807 4ezw:D (1.8) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221808 4ezx:A (1.7) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221809 4ezx:B (1.7) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221810 4ezy:A (1.85) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221811 4ezz:A (2.05) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221812 4f00:A (1.95) BS01 peptide ? GO:0005524 ... P0A6Y8 23562829
    221813 4f02:A (2.0) BS01 rna ? GO:0003676 ... P11940 23041282
    221814 4f02:A (2.0) BS02 peptide ? GO:0003676 ... P11940 23041282
    221815 4f02:D (2.0) BS01 rna ? GO:0003676 ... P11940 23041282
    221816 4f02:D (2.0) BS02 peptide ? GO:0003676 ... P11940 23041282
    221817 4f03:A (1.8) BS01 SO4 ? N/A I6ZUH3 23007392
    221818 4f03:B (1.8) BS01 SO4 ? N/A I6ZUH3 23007392
    221819 4f03:C (1.8) BS01 SO4 ? N/A I6ZUH3 23007392
    221820 4f04:A (2.3) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 22667327
    221821 4f04:B (2.3) BS01 ZN 2.1.3.2 GO:0005515 ... P0A7F3 22667327
    221822 4f04:B (2.3) BS02 UTP 2.1.3.2 GO:0005515 ... P0A7F3 22667327
    221823 4f04:C (2.3) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 22667327
    221824 4f04:D (2.3) BS01 ZN 2.1.3.2 GO:0005515 ... P0A7F3 22667327
    221825 4f04:D (2.3) BS02 UTP 2.1.3.2 GO:0005515 ... P0A7F3 22667327
    221826 4f07:A (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221827 4f07:A (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221828 4f07:B (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221829 4f07:B (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221830 4f07:C (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221831 4f07:D (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221832 4f07:E (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221833 4f07:F (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221834 4f07:F (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221835 4f07:G (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221836 4f07:G (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221837 4f07:H (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221838 4f07:I (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221839 4f07:I (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221840 4f07:J (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221841 4f07:K (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221842 4f07:L (2.3) BS01 FAD ? GO:0010181 ... O33495 23909369
    221843 4f07:L (2.3) BS02 FAD ? GO:0010181 ... O33495 23909369
    221844 4f08:A (2.82) BS01 1RS 2.7.10.2 GO:0004672 ... O60674 22698084 BindingDB: Ki=250nM, EC50=>8800nM
    221845 4f08:B (2.82) BS01 1RS 2.7.10.2 GO:0004672 ... O60674 22698084 BindingDB: Ki=250nM, EC50=>8800nM
    221846 4f09:A (2.4) BS01 JAK 2.7.10.2 GO:0004672 ... O60674 22698084 MOAD: Ki=200nM
    BindingDB: Ki=200nM, EC50=>8200nM
    221847 4f0a:A (3.25) BS01 PAM ? N/A Q61091 22653731
    221848 4f0a:B (3.25) BS01 ZN ? GO:0000578 ... P28026 22653731
    221849 4f0a:B (3.25) BS02 ZN ? GO:0000578 ... P28026 22653731
    221850 4f0b:A (1.45) BS01 GDS 2.5.1.18 N/A I7A570 23711374
    221851 4f0b:B (1.45) BS01 GDS 2.5.1.18 N/A I7A570 23711374
    221852 4f0c:A (1.901) BS01 GDS ? N/A I7B368 26348000
    221853 4f0d:A (2.7) BS01 3AB 2.4.2.- GO:0003950 ... Q8N5Y8 22661712
    221854 4f0e:A (2.4) BS01 0RU 2.4.2.- GO:0003950 ... Q460N3 22823910
    221855 4f0e:C (2.4) BS01 0RU 2.4.2.- GO:0003950 ... Q460N3 22823910
    221856 4f0e:D (2.4) BS01 0RU 2.4.2.- GO:0003950 ... Q460N3 22823910
    221857 4f0f:A (1.8) BS01 ACP 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221858 4f0h:A (1.96) BS01 PO4 4.1.1.39 GO:0000287 ... P23755 23112176
    221859 4f0h:A (1.96) BS02 PO4 4.1.1.39 GO:0000287 ... P23755 23112176
    221860 4f0l:A (2.05) BS01 FE ? GO:0005829 ... Q2YIL4 N/A
    221861 4f0l:B (2.05) BS01 FE ? GO:0005829 ... Q2YIL4 N/A
    221862 4f0n:B (1.679) BS01 peptide ? GO:0005179 ... P01308 23692694
    221863 4f0n:D (1.679) BS01 peptide ? GO:0005179 ... P01308 23692694
    221864 4f0o:B (1.672) BS01 peptide ? GO:0005179 ... P01308 23692694
    221865 4f0o:D (1.672) BS01 peptide ? GO:0005179 ... P01308 23692694
    221866 4f0p:A (2.79) BS01 MG ? GO:0003676 ... A0A0J9X157 22848107
    221867 4f0p:B (2.79) BS01 MG ? GO:0003676 ... A0A0J9X157 22848107
    221868 4f0q:A (2.046) BS01 MG ? GO:0003676 ... A0A0J9X157 22848107
    221869 4f0q:B (2.046) BS01 MG ? GO:0003676 ... A0A0J9X157 22848107
    221870 4f0q:C (2.046) BS01 MG ? GO:0003676 ... A0A0J9X157 22848107
    221871 4f0r:A (1.8) BS01 ZN 3.5.4.28
    3.5.4.31
    GO:0004000 ... Q7NZ90 N/A
    221872 4f0r:A (1.8) BS02 MTA 3.5.4.28
    3.5.4.31
    GO:0004000 ... Q7NZ90 N/A
    221873 4f0s:A (1.851) BS01 NOS 3.5.4.28
    3.5.4.31
    GO:0004000 ... Q7NZ90 N/A
    221874 4f0s:A (1.851) BS02 NOS 3.5.4.28
    3.5.4.31
    GO:0004000 ... Q7NZ90 N/A
    221875 4f0x:B (3.29) BS01 0OR 4.1.1.9 GO:0002931 ... O95822 23482565
    221876 4f0x:D (3.29) BS01 0OR 4.1.1.9 GO:0002931 ... O95822 23482565
    221877 4f0x:E (3.29) BS01 0OR 4.1.1.9 GO:0002931 ... O95822 23482565
    221878 4f0x:G (3.29) BS01 0OR 4.1.1.9 GO:0002931 ... O95822 23482565
    221879 4f0z:B (1.7) BS01 CA 3.1.3.16 GO:0004721 ... P63098 23468591
    221880 4f0z:B (1.7) BS02 CA 3.1.3.16 GO:0004721 ... P63098 23468591
    221881 4f0z:B (1.7) BS03 CA 3.1.3.16 GO:0004721 ... P63098 23468591
    221882 4f0z:B (1.7) BS04 CA 3.1.3.16 GO:0004721 ... P63098 23468591
    221883 4f10:A (2.2) BS01 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221884 4f10:A (2.2) BS02 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221885 4f10:A (2.2) BS03 LGU 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221886 4f10:B (2.2) BS01 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221887 4f10:B (2.2) BS02 LGU 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221888 4f13:A (2.208) BS01 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221889 4f13:A (2.208) BS02 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221890 4f13:A (2.208) BS03 MAW 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221891 4f13:B (2.208) BS01 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221892 4f13:B (2.208) BS02 BEM 4.2.2.3 GO:0016829 ... A0ACD6B938 22948922
    221893 4f14:A (1.2) BS01 peptide ? GO:0030018 ... O76041 23985323
    221894 4f14:A (1.2) BS02 ZN ? GO:0030018 ... O76041 23985323
    221895 4f18:A (0.96) BS01 8AR ? GO:0035435 ... C3K8K1 23034649
    221896 4f19:A (0.95) BS01 8AR ? GO:0035435 ... C3K8K1 23034649
    221897 4f1a:B (1.8) BS01 peptide ? GO:0005179 ... P01308 23692694
    221898 4f1a:D (1.8) BS01 peptide ? GO:0005179 ... P01308 23692694
    221899 4f1b:B (1.591) BS01 peptide ? GO:0005179 ... P01308 23692694
    221900 4f1b:D (1.591) BS01 peptide ? GO:0005179 ... P01308 23692694
    221901 4f1c:B (1.7) BS01 peptide ? GO:0005179 ... P01308 23692694
    221902 4f1c:D (1.7) BS01 peptide ? GO:0005179 ... P01308 23692694
    221903 4f1d:B (1.637) BS01 peptide ? GO:0005179 ... P01308 23692694
    221904 4f1d:D (1.637) BS01 peptide ? GO:0005179 ... P01308 23692694
    221905 4f1e:A (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221906 4f1e:B (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221907 4f1e:C (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221908 4f1e:D (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221909 4f1e:E (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221910 4f1e:F (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221911 4f1e:G (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221912 4f1e:H (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221913 4f1e:I (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221914 4f1e:J (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221915 4f1e:K (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221916 4f1e:L (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221917 4f1e:M (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221918 4f1e:N (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221919 4f1e:O (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221920 4f1e:P (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221921 4f1e:Q (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221922 4f1e:R (2.4) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221923 4f1f:B (1.684) BS01 peptide ? GO:0005179 ... P01308 23692694
    221924 4f1f:D (1.684) BS01 peptide ? GO:0005179 ... P01308 23692694
    221925 4f1g:B (1.637) BS01 peptide ? GO:0005179 ... P01308 23692694
    221926 4f1g:D (1.637) BS01 peptide ? GO:0005179 ... P01308 23692694
    221927 4f1h:A (1.662) BS01 dna 3.1.4.- GO:0003824 ... Q5XJA0 23104058
    221928 4f1h:B (1.662) BS01 dna 3.1.4.- GO:0003824 ... Q5XJA0 23104058
    221929 4f1j:A (1.73) BS01 MG ? N/A Q01502 23317521
    221930 4f1j:A (1.73) BS02 SO4 ? N/A Q01502 23317521
    221931 4f1j:A (1.73) BS03 SO4 ? N/A Q01502 23317521
    221932 4f1j:A (1.73) BS04 SO4 ? N/A Q01502 23317521
    221933 4f1j:A (1.73) BS05 MG ? N/A Q01502 23317521
    221934 4f1j:B (1.73) BS01 MG ? N/A Q01502 23317521
    221935 4f1j:B (1.73) BS02 SO4 ? N/A Q01502 23317521
    221936 4f1j:B (1.73) BS03 SO4 ? N/A Q01502 23317521
    221937 4f1j:B (1.73) BS04 MG ? N/A Q01502 23317521
    221938 4f1k:A (1.87) BS01 SO4 ? N/A Q01502 23317521
    221939 4f1k:A (1.87) BS02 SO4 ? N/A Q01502 23317521
    221940 4f1k:B (1.87) BS01 SO4 ? N/A Q01502 23317521
    221941 4f1l:A (1.9) BS01 0RY 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=7600nM
    221942 4f1l:B (1.9) BS01 0RY 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=7600nM
    221943 4f1l:C (1.9) BS01 0RY 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=7600nM
    221944 4f1l:C (1.9) BS02 0RY 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=7600nM
    221945 4f1l:D (1.9) BS01 0RY 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=7600nM
    221946 4f1m:A (2.04) BS01 ACP 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221947 4f1m:A (2.04) BS02 MG 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221948 4f1n:A (3.187) BS01 rna ? GO:0003676 ... A7TMA9 22722195
    221949 4f1n:B (3.187) BS01 rna ? GO:0003676 ... A7TMA9 22722195
    221950 4f1o:A (2.3) BS01 ACP 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221951 4f1p:A (2.3) BS01 ZN ? GO:0005096 ... Q15027 22645133
    221952 4f1p:B (2.3) BS01 ZN ? GO:0005096 ... Q15027 22645133
    221953 4f1q:A (2.8) BS01 0RZ 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=11200nM
    221954 4f1q:B (2.8) BS01 0RZ 2.4.2.- GO:0003950 ... Q460N5 22823910 BindingDB: IC50=>20000nM, Kd=11200nM
    221955 4f1s:A (3.0) BS01 F1S 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 22832322
    221956 4f1t:A (2.3) BS01 H52 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221957 4f1t:A (2.3) BS02 H52 2.7.11.1 GO:0004672 ... Q6XHB2 22689969
    221958 4f1w:A (1.36) BS01 EDO N/A GO:0003824 ... N/A 23685211
    221959 4f1w:A (1.36) BS02 EDO N/A GO:0003824 ... N/A 23685211
    221960 4f1w:B (1.36) BS01 ADE N/A GO:0003824 ... N/A 23685211
    221961 4f1y:A (1.79) BS01 CNI ? GO:0015276 ... P19492 22512472 MOAD: Kd=0.96uM
    221962 4f1y:A (1.79) BS02 ZN ? GO:0015276 ... P19492 22512472
    221963 4f1y:C (1.79) BS01 CNI ? GO:0015276 ... P19492 22512472 MOAD: Kd=0.96uM
    221964 4f1z:A (2.3) BS01 peptide ? GO:0005618 ... Q6GDH2 22719251
    221965 4f1z:A (2.3) BS02 MG ? GO:0005618 ... Q6GDH2 22719251
    221966 4f20:A (2.502) BS01 peptide ? GO:0005618 ... Q6GDH2 22719251
    221967 4f20:A (2.502) BS02 MG ? GO:0005618 ... Q6GDH2 22719251
    221968 4f21:E (2.5) BS01 0S1 3.1.1.- GO:0016787 ... Q5NI32 23430251
    221969 4f22:A (2.06) BS01 KAI ? GO:0015276 ... P19492 22512472 MOAD: Ki=30.26uM
    BindingDB: EC50=40000nM, Ki=5780nM
    221970 4f24:A (2.509) BS01 MG ? GO:0005618 ... Q6GDH2 22719251
    221971 4f24:A (2.509) BS02 MG ? GO:0005618 ... Q6GDH2 22719251
    221972 4f24:A (2.509) BS03 MG ? GO:0005618 ... Q6GDH2 22719251
    221973 4f24:A (2.509) BS04 MG ? GO:0005618 ... Q6GDH2 22719251
    221974 4f27:A (1.917) BS01 peptide ? GO:0005618 ... Q6GDH2 22719251
    221975 4f27:A (1.917) BS02 MG ? GO:0005618 ... Q6GDH2 22719251
    221976 4f27:A (1.917) BS03 MG ? GO:0005618 ... Q6GDH2 22719251
    221977 4f28:A (1.55) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221978 4f28:B (1.55) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221979 4f29:A (1.749) BS01 QUS ? GO:0015276 ... P19492 22512472 MOAD: Ki=0.168uM
    BindingDB: Ki=>10000nM
    221980 4f2a:A (3.11) BS01 FUC ? GO:0005576 ... P11597 22961980
    221981 4f2a:A (3.11) BS02 2OB ? GO:0005576 ... P11597 22961980
    221982 4f2a:A (3.11) BS03 2OB ? GO:0005576 ... P11597 22961980
    221983 4f2a:A (3.11) BS04 0SF ? GO:0005576 ... P11597 22961980
    221984 4f2b:A (2.16) BS01 INS 4.6.1.13 GO:0006629 ... P45723 23038258
    221985 4f2b:B (2.16) BS01 INS 4.6.1.13 GO:0006629 ... P45723 23038258
    221986 4f2c:A (1.35) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221987 4f2c:B (1.35) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 23271805
    221988 4f2d:A (2.3) BS01 MN 5.3.1.4 GO:0005737 ... P08202 N/A
    221989 4f2d:A (2.3) BS02 RB0 5.3.1.4 GO:0005737 ... P08202 N/A
    221990 4f2d:B (2.3) BS01 RB0 5.3.1.4 GO:0005737 ... P08202 N/A
    221991 4f2d:B (2.3) BS02 MN 5.3.1.4 GO:0005737 ... P08202 N/A
    221992 4f2d:B (2.3) BS03 RB0 5.3.1.4 GO:0005737 ... P08202 N/A
    221993 4f2d:C (2.3) BS01 MN 5.3.1.4 GO:0005737 ... P08202 N/A
    221994 4f2d:C (2.3) BS02 RB0 5.3.1.4 GO:0005737 ... P08202 N/A
    221995 4f2e:A (1.449) BS01 CU1 ? N/A A0A0H2ZPL4 23354287
    221996 4f2e:A (1.449) BS02 CU1 ? N/A A0A0H2ZPL4 23354287
    221997 4f2f:A (1.5) BS01 CU1 7.2.2.8 N/A A0A0H2ZQ91 23354287
    221998 4f2f:A (1.5) BS02 CU1 7.2.2.8 N/A A0A0H2ZQ91 23354287
    221999 4f2j:C (2.64) BS01 dna ? N/A O75362 23436653
    222000 4f2j:C (2.64) BS02 ZN ? N/A O75362 23436653

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).