SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    223201 4feg:A (1.09) BS05 FAD N/A GO:0000287 ... N/A 22730460
    223202 4feg:B (1.09) BS01 PYR N/A GO:0000287 ... N/A 22730460
    223203 4feg:B (1.09) BS02 PYR N/A GO:0000287 ... N/A 22730460
    223204 4feg:B (1.09) BS03 MG N/A GO:0000287 ... N/A 22730460
    223205 4feg:B (1.09) BS04 TDM N/A GO:0000287 ... N/A 22730460
    223206 4feg:B (1.09) BS05 FAD N/A GO:0000287 ... N/A 22730460
    223207 4feh:A (2.035) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 22733761
    223208 4fem:A (2.5) BS01 GLC ? GO:0005983 ... G8JZT0 22910908
    223209 4fem:A (2.5) BS02 GLC ? GO:0005983 ... G8JZT0 22910908
    223210 4feq:A (2.2) BS01 0T8 2.7.10.1 GO:0004672 ... P55144 23312472 MOAD: ic50=1.1uM
    223211 4fer:A (2.099) BS01 BGC ? N/A O34918 22927418
    223212 4fer:A (2.099) BS02 BGC ? N/A O34918 22927418
    223213 4fes:A (2.0) BS01 0T9 ? GO:0000139 ... P35844 23756172
    223214 4fes:B (2.0) BS01 0T9 ? GO:0000139 ... P35844 23756172
    223215 4feu:A (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223216 4feu:A (2.37) BS02 537 N/A GO:0005524 ... N/A 23758273
    223217 4feu:B (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223218 4feu:B (2.37) BS02 KAN N/A GO:0005524 ... N/A 23758273
    223219 4feu:C (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223220 4feu:C (2.37) BS02 537 N/A GO:0005524 ... N/A 23758273
    223221 4feu:D (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223222 4feu:E (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223223 4feu:E (2.37) BS02 537 N/A GO:0005524 ... N/A 23758273
    223224 4feu:F (2.37) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223225 4fev:A (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223226 4fev:A (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273
    223227 4fev:B (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223228 4fev:B (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273
    223229 4fev:C (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223230 4fev:C (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273
    223231 4fev:D (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223232 4fev:D (1.89) BS02 KAN N/A GO:0005524 ... N/A 23758273
    223233 4fev:D (1.89) BS03 PP1 N/A GO:0005524 ... N/A 23758273
    223234 4fev:E (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223235 4fev:E (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273
    223236 4fev:F (1.89) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223237 4fev:F (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273
    223238 4few:A (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223239 4few:A (1.98) BS02 PP2 N/A GO:0005524 ... N/A 23758273
    223240 4few:B (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223241 4few:B (1.98) BS02 PP2 N/A GO:0005524 ... N/A 23758273
    223242 4few:C (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223243 4few:C (1.98) BS02 PP2 N/A GO:0005524 ... N/A 23758273
    223244 4few:D (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223245 4few:D (1.98) BS02 KAN N/A GO:0005524 ... N/A 23758273
    223246 4few:D (1.98) BS03 PP2 N/A GO:0005524 ... N/A 23758273
    223247 4few:E (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223248 4few:E (1.98) BS02 PP2 N/A GO:0005524 ... N/A 23758273
    223249 4few:F (1.98) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223250 4few:F (1.98) BS02 KAN N/A GO:0005524 ... N/A 23758273
    223251 4few:F (1.98) BS03 PP2 N/A GO:0005524 ... N/A 23758273
    223252 4fex:A (2.71) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223253 4fex:A (2.71) BS02 0TO N/A GO:0005524 ... N/A 23758273
    223254 4fex:B (2.71) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223255 4fex:C (2.71) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223256 4fex:C (2.71) BS02 0TO N/A GO:0005524 ... N/A 23758273
    223257 4fex:D (2.71) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223258 4fex:D (2.71) BS02 0TO N/A GO:0005524 ... N/A 23758273
    223259 4fex:E (2.71) BS01 KAN N/A GO:0005524 ... N/A 23758273
    223260 4fex:E (2.71) BS02 0TO N/A GO:0005524 ... N/A 23758273
    223261 4fey:A (2.3) BS01 ADP 2.7.2.3 GO:0004618 ... Q5NF76 N/A
    223262 4ff1:A (2.47) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223263 4ff1:B (2.47) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223264 4ff2:A (2.0) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223265 4ff2:A (2.0) BS02 ATP 2.7.7.6 N/A Q859P9 23235152
    223266 4ff2:A (2.0) BS03 MN 2.7.7.6 N/A Q859P9 23235152
    223267 4ff2:A (2.0) BS04 5GP 2.7.7.6 N/A Q859P9 23235152
    223268 4ff2:B (2.0) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223269 4ff3:A (1.997) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223270 4ff3:A (1.997) BS02 ATP 2.7.7.6 N/A Q859P9 23235152
    223271 4ff3:A (1.997) BS03 MN 2.7.7.6 N/A Q859P9 23235152
    223272 4ff3:A (1.997) BS04 MN 2.7.7.6 N/A Q859P9 23235152
    223273 4ff3:A (1.997) BS05 5GP 2.7.7.6 N/A Q859P9 23235152
    223274 4ff3:B (1.997) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223275 4ff4:A (2.026) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223276 4ff4:A (2.026) BS02 AMP 2.7.7.6 N/A Q859P9 23235152
    223277 4ff4:A (2.026) BS03 POP 2.7.7.6 N/A Q859P9 23235152
    223278 4ff4:A (2.026) BS04 MN 2.7.7.6 N/A Q859P9 23235152
    223279 4ff4:A (2.026) BS05 5GP 2.7.7.6 N/A Q859P9 23235152
    223280 4ff4:B (2.026) BS01 dna 2.7.7.6 N/A Q859P9 23235152
    223281 4ff6:A (2.6) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 22733761
    223282 4ff6:A (2.6) BS02 0T4 1.1.98.3 GO:0003885 ... P9WJF1 22733761
    223283 4ff6:B (2.6) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 22733761
    223284 4ff6:B (2.6) BS02 0T4 1.1.98.3 GO:0003885 ... P9WJF1 22733761
    223285 4ff7:A (1.86) BS01 PGA 5.3.1.1 GO:0004807 ... P00942 22949845
    223286 4ff7:B (1.86) BS01 PO4 5.3.1.1 GO:0004807 ... P00942 22949845
    223287 4ff8:A (2.4) BS01 14S 2.7.10.1 GO:0004672 ... P55144 23312472 MOAD: ic50=0.4uM
    223288 4ff9:A (2.5003) BS01 CYS 1.15.1.1 GO:0000303 ... P00441 23919400
    223289 4ff9:A (2.5003) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23919400
    223290 4ff9:A (2.5003) BS03 CU 1.15.1.1 GO:0000303 ... P00441 23919400
    223291 4ff9:B (2.5003) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 23919400
    223292 4ff9:B (2.5003) BS02 CU 1.15.1.1 GO:0000303 ... P00441 23919400
    223293 4ffb:A (2.882) BS01 MG 3.6.5.- GO:0000070 ... P09733 22904013
    223294 4ffb:A (2.882) BS02 GTP 3.6.5.- GO:0000070 ... P09733 22904013
    223295 4ffb:B (2.882) BS01 GTP 3.6.5.6 GO:0000022 ... P02557 22904013
    223296 4ffd:A (2.31) BS01 MG ? GO:0016787 ... O58216 N/A
    223297 4ffg:A (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223298 4ffg:A (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223299 4ffg:A (2.3) BS03 0U8 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223300 4ffg:B (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223301 4ffg:B (2.3) BS02 0U8 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223302 4ffg:C (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223303 4ffg:C (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223304 4ffg:C (2.3) BS03 0U8 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223305 4ffg:D (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223306 4ffg:D (2.3) BS02 0U8 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223307 4ffh:A (2.2) BS01 GLC 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223308 4ffh:A (2.2) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223309 4ffh:A (2.2) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223310 4ffh:B (2.2) BS01 GLC 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223311 4ffh:B (2.2) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223312 4ffh:B (2.2) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223313 4ffh:C (2.2) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223314 4ffh:D (2.2) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223315 4ffi:A (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223316 4ffi:A (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223317 4ffi:A (2.3) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223318 4ffi:B (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223319 4ffi:B (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223320 4ffi:B (2.3) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223321 4ffi:B (2.3) BS04 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223322 4ffi:C (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223323 4ffi:C (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223324 4ffi:C (2.3) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223325 4ffi:C (2.3) BS04 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223326 4ffi:C (2.3) BS05 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223327 4ffi:D (2.3) BS01 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223328 4ffi:D (2.3) BS02 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223329 4ffi:D (2.3) BS03 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223330 4ffi:D (2.3) BS04 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223331 4ffi:D (2.3) BS05 FRU 4.2.2.16 GO:0004553 ... Q9KJD0 22810228
    223332 4ffk:A (1.76) BS01 FE 1.15.1.1 GO:0004784 ... D9Q0R7 N/A
    223333 4ffl:A (1.5) BS01 LYS 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223334 4ffl:A (1.5) BS02 ADP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223335 4ffl:A (1.5) BS03 PO4 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223336 4ffl:A (1.5) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223337 4ffl:A (1.5) BS05 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223338 4ffl:A (1.5) BS06 CO3 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223339 4ffl:A (1.5) BS07 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223340 4ffm:A (1.91) BS01 0TF 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223341 4ffm:A (1.91) BS02 ADP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223342 4ffm:A (1.91) BS03 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223343 4ffm:A (1.91) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223344 4ffm:A (1.91) BS05 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223345 4ffn:A (2.4) BS01 ORD 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223346 4ffn:A (2.4) BS02 ANP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223347 4ffn:A (2.4) BS03 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223348 4ffn:A (2.4) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223349 4ffn:A (2.4) BS05 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223350 4ffo:A (2.0) BS01 0TK 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223351 4ffo:A (2.0) BS02 ADP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223352 4ffo:A (2.0) BS03 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223353 4ffo:A (2.0) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223354 4ffo:A (2.0) BS05 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223355 4ffp:A (2.0) BS01 0TF 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223356 4ffp:A (2.0) BS02 ADP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223357 4ffp:A (2.0) BS03 PO4 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223358 4ffp:A (2.0) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223359 4ffp:A (2.0) BS05 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223360 4ffp:A (2.0) BS06 ADP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223361 4ffr:A (1.8) BS01 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223362 4ffr:A (1.8) BS02 ATP 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223363 4ffr:A (1.8) BS03 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223364 4ffr:A (1.8) BS04 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223365 4ffr:A (1.8) BS05 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223366 4ffr:A (1.8) BS06 MG 6.3.2.59 GO:0005524 ... Q46E79 22985965
    223367 4ffs:A (1.9) BS01 BIG 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 22891633 MOAD: Kd=36pM
    223368 4fft:A (2.1) BS01 BGC ? N/A O34918 22927418
    223369 4ffw:A (2.9) BS01 715 3.4.14.5 GO:0002020 ... P14740 N/A BindingDB: IC50=26.01nM
    223370 4ffw:B (2.9) BS01 715 3.4.14.5 GO:0002020 ... P14740 N/A BindingDB: IC50=26.01nM
    223371 4fg2:A (2.099) BS01 BGC ? N/A O34918 22927418
    223372 4fg2:B (2.099) BS01 BGC ? N/A O34918 22927418
    223373 4fg3:B (2.001) BS01 peptide ? GO:0005179 ... P01308 23692694
    223374 4fg3:D (2.001) BS01 peptide ? GO:0005179 ... P01308 23692694
    223375 4fg4:B (2.701) BS01 SGC ? N/A O34918 22927418
    223376 4fg7:A (2.7) BS01 ATP 2.7.11.17 GO:0004672 ... Q14012 23028635
    223377 4fg8:A (2.2) BS01 ATP 2.7.11.17 GO:0004672 ... Q14012 23028635
    223378 4fg8:B (2.2) BS01 ATP 2.7.11.17 GO:0004672 ... Q14012 23028635
    223379 4fg9:A (2.4) BS01 ATP 2.7.11.17 GO:0004672 ... Q14012 23028635
    223380 4fg9:B (2.4) BS01 ATP 2.7.11.17 GO:0004672 ... Q14012 23028635
    223381 4fga:A (2.3) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 N/A
    223382 4fgc:A (2.498) BS01 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223383 4fgc:B (2.498) BS01 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223384 4fgc:B (2.498) BS02 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223385 4fgc:B (2.498) BS03 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223386 4fgc:B (2.498) BS04 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223387 4fgc:C (2.498) BS01 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223388 4fgc:C (2.498) BS02 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223389 4fgc:C (2.498) BS03 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223390 4fgc:D (2.498) BS01 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223391 4fgc:D (2.498) BS02 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223392 4fgc:D (2.498) BS03 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223393 4fgc:D (2.498) BS04 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223394 4fgc:E (2.498) BS01 PQ0 1.7.1.13 GO:0005737 ... O31678 22787148
    223395 4fgc:E (2.498) BS02 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223396 4fgc:E (2.498) BS03 CA 1.7.1.13 GO:0005737 ... O31678 22787148
    223397 4fgf:A (1.6) BS01 SO4 ? GO:0008083 ... P09038 7691311
    223398 4fgf:A (1.6) BS02 BME ? GO:0008083 ... P09038 7691311
    223399 4fgg:A (2.3) BS01 0U5 1.5.1.3 GO:0004146 ... P0A017 22930550 MOAD: Ki=4.1nM
    223400 4fgg:A (2.3) BS02 NAP 1.5.1.3 GO:0004146 ... P0A017 22930550

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).