SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    22401 1ihs:H (2.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 8272424
    22402 1iht:H (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 8272424
    22403 1iht:H (2.1) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 8272424
    22404 1ihu:A (2.15) BS01 MG 7.3.2.7 GO:0005524 ... P08690 11395509
    22405 1ihu:A (2.15) BS02 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22406 1ihu:A (2.15) BS03 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22407 1ihu:A (2.15) BS04 AF3 7.3.2.7 GO:0005524 ... P08690 11395509
    22408 1ihu:A (2.15) BS05 TAS 7.3.2.7 GO:0005524 ... P08690 11395509
    22409 1ihx:A (2.8) BS01 SND 1.2.1.12 GO:0004365 ... P56649 12136140
    22410 1ihx:B (2.8) BS01 SND 1.2.1.12 GO:0004365 ... P56649 12136140
    22411 1ihx:C (2.8) BS01 SND 1.2.1.12 GO:0004365 ... P56649 12136140
    22412 1ihx:D (2.8) BS01 SND 1.2.1.12 GO:0004365 ... P56649 12136140
    22413 1ihy:A (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140
    22414 1ihy:B (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140
    22415 1ihy:C (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140
    22416 1ihy:D (3.0) BS01 APR 1.2.1.12 GO:0004365 ... P56649 12136140
    22417 1ii0:A (2.4) BS01 MG 7.3.2.7 GO:0005524 ... P08690 11395509
    22418 1ii0:A (2.4) BS02 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22419 1ii0:A (2.4) BS03 ATP 7.3.2.7 GO:0005524 ... P08690 11395509
    22420 1ii0:A (2.4) BS04 TAS 7.3.2.7 GO:0005524 ... P08690 11395509
    22421 1ii0:B (2.4) BS01 MG 7.3.2.7 GO:0005524 ... P08690 11395509
    22422 1ii0:B (2.4) BS02 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22423 1ii0:B (2.4) BS03 ATP 7.3.2.7 GO:0005524 ... P08690 11395509
    22424 1ii0:B (2.4) BS04 TAS 7.3.2.7 GO:0005524 ... P08690 11395509
    22425 1ii5:A (1.6) BS01 GLU ? GO:0015276 ... P73797 11518533 MOAD: Kd=240nM
    22426 1ii6:A (2.1) BS01 ADP ? GO:0003777 ... P52732 11328809
    22427 1ii6:B (2.1) BS01 ADP ? GO:0003777 ... P52732 11328809
    22428 1ii7:A (2.2) BS01 MN 3.1.-.- GO:0000729 ... Q8U1N9 11371344
    22429 1ii7:A (2.2) BS02 MN 3.1.-.- GO:0000729 ... Q8U1N9 11371344
    22430 1ii7:A (2.2) BS03 DA 3.1.-.- GO:0000729 ... Q8U1N9 11371344
    22431 1ii7:B (2.2) BS01 MN 3.1.-.- GO:0000729 ... Q8U1N9 11371344
    22432 1ii7:B (2.2) BS02 MN 3.1.-.- GO:0000729 ... Q8U1N9 11371344
    22433 1ii9:A (2.6) BS01 MG 7.3.2.7 GO:0005524 ... P08690 11395509
    22434 1ii9:A (2.6) BS02 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22435 1ii9:A (2.6) BS03 ANP 7.3.2.7 GO:0005524 ... P08690 11395509
    22436 1ii9:A (2.6) BS04 TAS 7.3.2.7 GO:0005524 ... P08690 11395509
    22437 1ii9:B (2.6) BS01 MG 7.3.2.7 GO:0005524 ... P08690 11395509
    22438 1ii9:B (2.6) BS02 ADP 7.3.2.7 GO:0005524 ... P08690 11395509
    22439 1ii9:B (2.6) BS03 ANP 7.3.2.7 GO:0005524 ... P08690 11395509
    22440 1ii9:B (2.6) BS04 TAS 7.3.2.7 GO:0005524 ... P08690 11395509
    22441 1iic:A (2.2) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 11371195
    22442 1iic:B (2.2) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 11371195
    22443 1iid:A (2.5) BS01 peptide 2.3.1.97 GO:0004379 ... P14743 11371195
    22444 1iid:A (2.5) BS02 NHM 2.3.1.97 GO:0004379 ... P14743 11371195
    22445 1iig:B (2.6) BS01 3PP 5.3.1.1 GO:0004807 ... P04789 2062828
    22446 1iii:A (2.0) BS01 BME ? GO:0001523 ... P02766 12403615
    22447 1iii:B (2.0) BS01 BME ? GO:0001523 ... P02766 12403615
    22448 1iik:A (2.0) BS01 BME ? GO:0001523 ... P02766 12403615
    22449 1iik:A (2.0) BS02 BME ? GO:0001523 ... P02766 12403615
    22450 1iik:B (2.0) BS01 BME ? GO:0001523 ... P02766 12403615
    22451 1iim:A (2.1) BS01 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22452 1iim:A (2.1) BS02 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22453 1iim:A (2.1) BS03 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22454 1iim:B (2.1) BS01 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22455 1iim:B (2.1) BS02 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22456 1iim:B (2.1) BS03 TTP 2.7.7.24 GO:0000271 ... P26393 11373625
    22457 1iin:A (2.1) BS01 UPG 2.7.7.24 GO:0000271 ... P26393 11373625
    22458 1iin:B (2.1) BS01 UPG 2.7.7.24 GO:0000271 ... P26393 11373625
    22459 1iin:C (2.1) BS01 UPG 2.7.7.24 GO:0000271 ... P26393 11373625
    22460 1iin:D (2.1) BS01 UPG 2.7.7.24 GO:0000271 ... P26393 11373625
    22461 1iiq:A (1.83) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 11906284 MOAD: Ki=33nM
    22462 1iiq:B (1.83) BS01 0ZR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 11906284
    22463 1iit:A (1.9) BS01 SER ? GO:0015276 ... P73797 11518533
    22464 1iiu:A (2.5) BS01 RTL ? GO:0001555 ... P41263 11738088
    22465 1iiy:A (-1.00) BS01 MAN ? GO:0030246 ... P81180 11591348
    22466 1iiy:A (-1.00) BS02 MAN ? GO:0030246 ... P81180 11591348
    22467 1ij0:A (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22468 1ij0:B (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22469 1ij0:C (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22470 1ij1:A (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22471 1ij1:B (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22472 1ij1:C (1.86) BS01 ZN ? GO:0003700 ... P03069 11371197
    22473 1ij6:A (3.1) BS01 CA ? GO:0005509 ... P14725 12517342
    22474 1ij6:A (3.1) BS02 CA ? GO:0005509 ... P14725 12517342
    22475 1ij6:A (3.1) BS03 CA ? GO:0005509 ... P14725 12517342
    22476 1ij6:A (3.1) BS04 CA ? GO:0005509 ... P14725 12517342
    22477 1ij8:A (2.0) BS01 BNI ? GO:0005576 ... P02701 11395489
    22478 1ij8:B (2.0) BS01 BNI ? GO:0005576 ... P02701 11395489
    22479 1ijd:A (3.0) BS01 BCL ? GO:0005886 ... P35089 11467938
    22480 1ijd:A (3.0) BS02 BCL ? GO:0005886 ... P35089 11467938
    22481 1ijd:A (3.0) BS03 RPA ? GO:0005886 ... P35089 11467938
    22482 1ijd:A (3.0) BS04 BCL ? GO:0005886 ... P35089 11467938
    22483 1ijd:A (3.0) BS05 RPA ? GO:0005886 ... P35089 11467938
    22484 1ijd:B (3.0) BS01 BCL ? GO:0005886 ... P35094 11467938
    22485 1ijd:B (3.0) BS02 BCL ? GO:0005886 ... P35094 11467938
    22486 1ijd:B (3.0) BS03 RPA ? GO:0005886 ... P35094 11467938
    22487 1ijd:B (3.0) BS04 BCL ? GO:0005886 ... P35094 11467938
    22488 1ijd:C (3.0) BS01 RPA ? GO:0005886 ... P35089 11467938
    22489 1ijd:C (3.0) BS02 BCL ? GO:0005886 ... P35089 11467938
    22490 1ijd:C (3.0) BS03 BCL ? GO:0005886 ... P35089 11467938
    22491 1ijd:C (3.0) BS04 RPA ? GO:0005886 ... P35089 11467938
    22492 1ijd:C (3.0) BS05 BCL ? GO:0005886 ... P35089 11467938
    22493 1ijd:C (3.0) BS06 RPA ? GO:0005886 ... P35089 11467938
    22494 1ijd:D (3.0) BS01 BCL ? GO:0005886 ... P35094 11467938
    22495 1ijd:D (3.0) BS02 BCL ? GO:0005886 ... P35094 11467938
    22496 1ijd:D (3.0) BS03 RPA ? GO:0005886 ... P35094 11467938
    22497 1ijd:D (3.0) BS04 BCL ? GO:0005886 ... P35094 11467938
    22498 1ijd:E (3.0) BS01 RPA ? GO:0005886 ... P35089 11467938
    22499 1ijd:E (3.0) BS02 BCL ? GO:0005886 ... P35089 11467938
    22500 1ijd:E (3.0) BS03 BCL ? GO:0005886 ... P35089 11467938
    22501 1ijd:E (3.0) BS04 RPA ? GO:0005886 ... P35089 11467938
    22502 1ijd:E (3.0) BS05 BCL ? GO:0005886 ... P35089 11467938
    22503 1ijd:F (3.0) BS01 BCL ? GO:0005886 ... P35094 11467938
    22504 1ijd:F (3.0) BS02 BCL ? GO:0005886 ... P35094 11467938
    22505 1ijd:F (3.0) BS03 RPA ? GO:0005886 ... P35094 11467938
    22506 1ijd:F (3.0) BS04 BCL ? GO:0005886 ... P35094 11467938
    22507 1ije:A (2.4) BS01 GDP ? GO:0000329 ... P02994 11373622
    22508 1ijf:A (3.0) BS01 GDP ? GO:0000329 ... P02994 11373622
    22509 1ijh:A (1.53) BS01 FAD 1.1.3.6
    5.3.3.1
    GO:0004769 ... P12676 11705367
    22510 1iji:A (2.2) BS01 PLP 2.6.1.9 GO:0000105 ... P06986 11518529
    22511 1ijj:A (2.85) BS01 ATP 3.6.4.- GO:0000287 ... P68135 11932258
    22512 1ijj:A (2.85) BS02 LAR 3.6.4.- GO:0000287 ... P68135 11932258
    22513 1ijj:B (2.85) BS01 ATP 3.6.4.- GO:0000287 ... P68135 11932258
    22514 1ijj:B (2.85) BS02 LAR 3.6.4.- GO:0000287 ... P68135 11932258
    22515 1ijl:A (2.6) BS01 CA 3.1.1.4 GO:0004623 ... Q7SID6 11752784
    22516 1ijl:B (2.6) BS01 CA 3.1.1.4 GO:0004623 ... Q7SID6 11752784
    22517 1ijr:A (2.2) BS01 CC0 2.7.10.2 N/A P06239 11527723
    22518 1ijs:P (3.25) BS01 dna ? GO:0005198 ... P17455 8918534
    22519 1ijt:A (1.8) BS01 SO4 ? GO:0008083 ... P08620 11486033
    22520 1ijw:C (2.4) BS01 dna ? GO:0000150 ... P03013 11847127
    22521 1ijw:C (2.4) BS02 dna ? GO:0000150 ... P03013 11847127
    22522 1ik3:A (2.0) BS01 FE 1.13.11.58 GO:0005506 ... P09186 11686682
    22523 1ik3:A (2.0) BS02 13S 1.13.11.58 GO:0005506 ... P09186 11686682
    22524 1ik3:A (2.0) BS03 13R 1.13.11.58 GO:0005506 ... P09186 11686682
    22525 1ik3:A (2.0) BS04 9OH 1.13.11.58 GO:0005506 ... P09186 11686682
    22526 1ik3:A (2.0) BS05 11O 1.13.11.58 GO:0005506 ... P09186 11686682
    22527 1ik4:A (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22528 1ik4:B (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22529 1ik4:C (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22530 1ik4:D (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22531 1ik4:E (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22532 1ik4:F (2.0) BS01 PGH 4.2.3.3 GO:0005737 ... P0A731 11389594 MOAD: Ki=39nM
    22533 1ik9:A (2.3) BS01 peptide ? GO:0003677 ... Q13426 11702069
    22534 1ik9:B (2.3) BS01 peptide ? GO:0003677 ... Q13426 11702069
    22535 1ika:A (2.7) BS01 CA 1.1.1.42 GO:0000287 ... P08200 8369301
    22536 1ika:A (2.7) BS02 AKG 1.1.1.42 GO:0000287 ... P08200 8369301
    22537 1ike:A (1.5) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 11560480
    22538 1ike:A (1.5) BS02 HSM 1.7.6.1 GO:0005576 ... Q94734 11560480
    22539 1ikf:H (2.5) BS01 peptide N/A N/A N/A 1566062
    22540 1ikf:L (2.5) BS01 peptide N/A N/A N/A 1566062
    22541 1ikg:A (1.9) BS01 REX 3.4.16.4 GO:0005576 ... P15555 12215418
    22542 1iki:A (1.25) BS01 REY 3.4.16.4 GO:0005576 ... P15555 12215418
    22543 1iki:A (1.25) BS02 DAL 3.4.16.4 GO:0005576 ... P15555 12215418
    22544 1ikj:A (1.27) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 11560480
    22545 1ikj:A (1.27) BS02 IMD 1.7.6.1 GO:0005576 ... Q94734 11560480
    22546 1ikt:A (1.75) BS01 OXN 1.1.1.n12
    4.2.1.107
    4.2.1.119
    N/A P51659 11700068
    22547 1ikv:A (3.0) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 11895437
    22548 1ikw:A (3.0) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 11895437
    22549 1ikx:A (2.8) BS01 PNU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 11895437
    22550 1iky:A (3.0) BS01 MSD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 11895437
    22551 1il0:A (2.2) BS01 CAA 1.1.1.35 GO:0003857 ... Q16836 11451959
    22552 1il0:A (2.2) BS02 NAD 1.1.1.35 GO:0003857 ... Q16836 11451959
    22553 1il0:A (2.2) BS03 CAA 1.1.1.35 GO:0003857 ... Q16836 11451959
    22554 1il0:B (2.2) BS01 CAA 1.1.1.35 GO:0003857 ... Q16836 11451959
    22555 1il0:B (2.2) BS02 NAD 1.1.1.35 GO:0003857 ... Q16836 11451959
    22556 1il2:A (2.6) BS01 rna 6.1.1.12 GO:0000166 ... P21889 11566892
    22557 1il2:A (2.6) BS02 AMO 6.1.1.12 GO:0000166 ... P21889 11566892
    22558 1il2:B (2.6) BS01 rna 6.1.1.12 GO:0000166 ... P21889 11566892
    22559 1il2:B (2.6) BS02 AMO 6.1.1.12 GO:0000166 ... P21889 11566892
    22560 1il3:A (2.8) BS01 7DG 3.2.2.22 GO:0017148 ... P02879 11754581
    22561 1il4:A (2.6) BS01 9DG 3.2.2.22 GO:0017148 ... P02879 11754581 BindingDB: IC50=1400000nM
    22562 1il5:A (2.8) BS01 DDP 3.2.2.22 GO:0017148 ... P02879 11754581
    22563 1il9:A (3.1) BS01 MOG 3.2.2.22 GO:0017148 ... P02879 11754581 BindingDB: IC50=400000nM
    22564 1ile:A (2.5) BS01 ZN 6.1.1.5 GO:0000049 ... P56690 9554847
    22565 1ile:A (2.5) BS02 ZN 6.1.1.5 GO:0000049 ... P56690 9554847
    22566 1ilh:A (2.76) BS01 SRL ? GO:0003677 ... O75469 11408620 BindingDB: EC50=440nM
    22567 1ilp:A (-1.00) BS01 peptide ? GO:0001525 ... P10145 10368283
    22568 1ilq:A (-1.00) BS01 peptide ? GO:0001525 ... P10145 10368283
    22569 1ils:A (2.2) BS01 CU ? GO:0005507 ... P00282 8568881
    22570 1ils:B (2.2) BS01 CU ? GO:0005507 ... P00282 8568881
    22571 1ils:C (2.2) BS01 CU ? GO:0005507 ... P00282 8568881
    22572 1ils:D (2.2) BS01 CU ? GO:0005507 ... P00282 8568881
    22573 1ilu:A (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22574 1ilu:B (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22575 1ilu:C (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22576 1ilu:D (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22577 1ilu:E (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22578 1ilu:F (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22579 1ilu:G (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22580 1ilu:H (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22581 1ilu:I (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22582 1ilu:K (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22583 1ilu:L (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22584 1ilu:M (2.3) BS01 CU ? GO:0005507 ... P00282 8568881
    22585 1ilx:C (3.8) BS01 CLA N/A N/A N/A 11459991
    22586 1ilx:L (3.8) BS01 CLA N/A N/A N/A 11459991
    22587 1im2:A (2.8) BS01 ADP ? GO:0005515 ... P43773 11468391
    22588 1im3:A (2.2) BS01 peptide ? N/A P04439 11391001
    22589 1im3:E (2.2) BS01 peptide ? N/A P04439 11391001
    22590 1im3:I (2.2) BS01 peptide ? N/A P04439 11391001
    22591 1im3:M (2.2) BS01 peptide ? N/A P04439 11391001
    22592 1im5:A (1.65) BS01 ZN 3.5.1.19 GO:0008936 ... O58727 11714269
    22593 1im8:A (2.2) BS01 CL 2.1.3.- GO:0002098 ... P43985 11746687
    22594 1im8:A (2.2) BS02 SAI 2.1.3.- GO:0002098 ... P43985 11746687
    22595 1im8:B (2.2) BS01 CL 2.1.3.- GO:0002098 ... P43985 11746687
    22596 1im8:B (2.2) BS02 SAI 2.1.3.- GO:0002098 ... P43985 11746687
    22597 1im9:A (2.8) BS01 peptide ? N/A P10321 11323700
    22598 1im9:E (2.8) BS01 peptide ? N/A P10321 11323700
    22599 1ima:A (2.3) BS01 IPD 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068620
    22600 1ima:B (2.3) BS01 IPD 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068620

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).