SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    22601 1imb:A (2.2) BS01 LIP 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068620
    22602 1imb:B (2.2) BS01 LIP 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068620
    22603 1imc:A (2.6) BS01 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22604 1imc:A (2.6) BS02 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22605 1imc:B (2.6) BS01 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22606 1imc:B (2.6) BS02 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22607 1imc:B (2.6) BS03 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22608 1imd:A (2.6) BS01 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22609 1imd:A (2.6) BS02 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22610 1imd:A (2.6) BS03 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22611 1imd:B (2.6) BS01 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22612 1imd:B (2.6) BS02 MN 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22613 1imd:B (2.6) BS03 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22614 1ime:A (2.25) BS01 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22615 1ime:B (2.25) BS01 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22616 1ime:B (2.25) BS02 CA 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 8068621
    22617 1imh:C (2.86) BS01 dna ? GO:0000978 ... O94916 11780147
    22618 1imh:C (2.86) BS02 dna ? GO:0000978 ... O94916 11780147
    22619 1imh:D (2.86) BS01 dna ? GO:0000978 ... O94916 11780147
    22620 1iml:A (-1.00) BS01 ZN ? GO:0005737 ... P63255 8632452
    22621 1iml:A (-1.00) BS02 ZN ? GO:0005737 ... P63255 8632452
    22622 1imx:A (1.82) BS01 CPQ ? GO:0005179 ... P05019 11551198
    22623 1in0:B (2.14) BS01 HG ? GO:0000166 ... P44096 12943362
    22624 1in4:A (1.6) BS01 ADP 3.6.4.12 GO:0000400 ... Q56313 11478862
    22625 1in5:A (2.0) BS01 ADP 3.6.4.12 GO:0000400 ... Q56313 11478862
    22626 1in6:A (1.8) BS01 ADP 3.6.4.12 GO:0000400 ... Q56313 11478862
    22627 1in7:A (1.9) BS01 ADP 3.6.4.12 GO:0000400 ... Q56313 11478862
    22628 1in8:A (1.9) BS01 ADP 3.6.4.12 GO:0000400 ... Q56313 11478862
    22629 1inc:A (1.94) BS01 CA 3.4.21.36 GO:0004252 ... P00772 3430613
    22630 1inc:A (1.94) BS02 ICL 3.4.21.36 GO:0004252 ... P00772 3430613
    22631 1ind:H (2.2) BS01 EOT N/A N/A N/A 8218161 MOAD: Ka=11000000000M^-1
    22632 1ind:L (2.2) BS01 EOT N/A N/A N/A 8218161
    22633 1ine:H (2.8) BS01 EOT N/A N/A N/A 8218161
    22634 1ine:L (2.8) BS01 EOT N/A N/A N/A 8218161
    22635 1inf:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... P03474 7650674
    22636 1inf:A (2.4) BS02 ST4 3.2.1.18 GO:0004308 ... P03474 7650674 MOAD: ic50=10uM
    22637 1ing:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... P06820 7650674
    22638 1ing:A (2.4) BS02 ST5 3.2.1.18 GO:0004308 ... P06820 7650674
    22639 1ing:B (2.4) BS01 MAN 3.2.1.18 GO:0004308 ... P06820 7650674
    22640 1ing:B (2.4) BS02 CA 3.2.1.18 GO:0004308 ... P06820 7650674
    22641 1ing:B (2.4) BS03 ST5 3.2.1.18 GO:0004308 ... P06820 7650674
    22642 1inh:A (2.4) BS01 FUL 3.2.1.18 GO:0004308 ... P06820 7650674
    22643 1inh:A (2.4) BS02 CA 3.2.1.18 GO:0004308 ... P06820 7650674
    22644 1inh:A (2.4) BS03 ST6 3.2.1.18 GO:0004308 ... P06820 7650674
    22645 1inh:B (2.4) BS01 MAN 3.2.1.18 GO:0004308 ... P06820 7650674
    22646 1inh:B (2.4) BS02 BMA 3.2.1.18 GO:0004308 ... P06820 7650674
    22647 1inh:B (2.4) BS03 FUC 3.2.1.18 GO:0004308 ... P06820 7650674
    22648 1inh:B (2.4) BS04 CA 3.2.1.18 GO:0004308 ... P06820 7650674
    22649 1inh:B (2.4) BS05 ST6 3.2.1.18 GO:0004308 ... P06820 7650674
    22650 1ini:A (1.82) BS01 CDM 2.7.7.60 GO:0000287 ... Q46893 11427897
    22651 1inn:A (1.8) BS01 ZN 4.4.1.21 GO:0005506 ... Q9RRU8 11435117
    22652 1inn:A (1.8) BS02 MET 4.4.1.21 GO:0005506 ... Q9RRU8 11435117
    22653 1inn:B (1.8) BS01 ZN 4.4.1.21 GO:0005506 ... Q9RRU8 11435117
    22654 1inn:B (1.8) BS02 MET 4.4.1.21 GO:0005506 ... Q9RRU8 11435117
    22655 1ino:A (2.2) BS01 MN 3.6.1.1 GO:0000287 ... P0A7A9 8543015
    22656 1inp:A (2.3) BS01 MG 3.1.3.57 GO:0004441 ... P21327 7947723
    22657 1inq:A (2.2) BS01 peptide ? N/A P01899 11751972
    22658 1inv:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... P03474 7844831
    22659 1inv:A (2.4) BS02 EQP 3.2.1.18 GO:0004308 ... P03474 7844831
    22660 1inw:A (2.4) BS01 AXP 3.2.1.18 GO:0004308 ... P06820 7844831
    22661 1inw:A (2.4) BS02 CA 3.2.1.18 GO:0004308 ... P06820 7844831
    22662 1inx:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... P06820 7844831
    22663 1inx:A (2.4) BS02 EQP 3.2.1.18 GO:0004308 ... P06820 7844831
    22664 1iny:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... P03472 7844831
    22665 1iny:A (2.4) BS02 EQP 3.2.1.18 GO:0004308 ... P03472 7844831
    22666 1io0:A (1.45) BS01 ZN ? GO:0005523 ... Q9DEA6 12414704
    22667 1io3:A (1.9) BS01 HEC ? GO:0009055 ... P00083 11240122
    22668 1io4:A (3.0) BS01 dna ? GO:0003700 ... P17676 11257229
    22669 1io4:A (3.0) BS02 dna ? GO:0003700 ... P17676 11257229
    22670 1io4:B (3.0) BS01 dna ? GO:0003700 ... P17676 11257229
    22671 1io4:B (3.0) BS02 dna ? GO:0003700 ... P17676 11257229
    22672 1io4:C (3.0) BS01 dna ? GO:0003677 ... Q03347 11257229
    22673 1io4:C (3.0) BS02 dna ? GO:0003677 ... Q03347 11257229
    22674 1io6:A (-1.00) BS01 peptide ? N/A P62993 N/A
    22675 1io7:A (1.5) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22676 1io7:B (1.5) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22677 1io8:A (2.0) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22678 1io8:B (2.0) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22679 1io9:A (2.05) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22680 1io9:B (2.05) BS01 HEM 1.11.1.7
    1.14.-.-
    GO:0004497 ... Q55080 12237217
    22681 1iod:A (2.3) BS01 CA ? GO:0005576 ... Q9IAM1 11404471
    22682 1iod:A (2.3) BS02 CA ? GO:0005576 ... Q9IAM1 11404471
    22683 1iod:B (2.3) BS01 CA ? GO:0005576 ... Q9DEF8 11404471
    22684 1iod:G (2.3) BS01 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22685 1iod:G (2.3) BS02 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22686 1iod:G (2.3) BS03 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22687 1iod:G (2.3) BS04 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22688 1iod:G (2.3) BS05 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22689 1iod:G (2.3) BS06 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22690 1iod:G (2.3) BS07 CA 3.4.21.6 GO:0005509 ... P00743 11404471
    22691 1ioe:A (2.9) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22692 1ioe:A (2.9) BS02 XMA 3.4.21.6 GO:0004252 ... P00742 N/A
    22693 1iol:A (2.3) BS01 EST 1.1.1.51
    1.1.1.62
    GO:0004303 ... P14061 8756321
    22694 1iom:A (1.5) BS01 CO3 2.3.3.16 GO:0005737 ... Q5SIM6 27493854
    22695 1ion:A (2.3) BS01 ADP ? GO:0005524 ... O58346 11566131
    22696 1iop:A (1.9) BS01 HE6 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 9548931
    22697 1iov:A (2.2) BS01 MG 6.3.2.4 GO:0005524 ... P07862 9054558
    22698 1iov:A (2.2) BS02 MG 6.3.2.4 GO:0005524 ... P07862 9054558
    22699 1iov:A (2.2) BS03 MG 6.3.2.4 GO:0005524 ... P07862 9054558
    22700 1iov:A (2.2) BS04 ADP 6.3.2.4 GO:0005524 ... P07862 9054558
    22701 1iov:A (2.2) BS05 POB 6.3.2.4 GO:0005524 ... P07862 9054558
    22702 1iow:A (1.9) BS01 MG 6.3.2.4 GO:0005524 ... P07862 9054558
    22703 1iow:A (1.9) BS02 MG 6.3.2.4 GO:0005524 ... P07862 9054558
    22704 1iow:A (1.9) BS03 ADP 6.3.2.4 GO:0005524 ... P07862 9054558
    22705 1iow:A (1.9) BS04 PHY 6.3.2.4 GO:0005524 ... P07862 9054558
    22706 1ioz:A (2.0) BS01 GDP 3.6.5.2 GO:0000139 ... P01112 12836672
    22707 1ipb:A (2.0) BS01 GTA ? GO:0000082 ... P06730 11879179
    22708 1ipc:A (2.0) BS01 MGP ? GO:0000082 ... P06730 11879179 BindingDB: Ki=28nM
    22709 1ipe:A (2.5) BS01 NDP 1.1.1.236 GO:0009710 ... P50163 12741812
    22710 1ipe:B (2.5) BS01 NDP 1.1.1.236 GO:0009710 ... P50163 12741812
    22711 1ipf:A (2.5) BS01 NDP 1.1.1.236 GO:0009710 ... P50163 12741812
    22712 1ipf:A (2.5) BS02 TNE 1.1.1.236 GO:0009710 ... P50163 12741812
    22713 1ipf:B (2.5) BS01 NDP 1.1.1.236 GO:0009710 ... P50163 12741812
    22714 1ipf:B (2.5) BS02 TNE 1.1.1.236 GO:0009710 ... P50163 12741812
    22715 1iph:A (2.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 7663946
    22716 1iph:B (2.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 7663946
    22717 1iph:C (2.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 7663946
    22718 1iph:D (2.8) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 7663946
    22719 1ipp:A (2.2) BS01 dna 3.1.-.- GO:0004519 ... Q94702 9665136
    22720 1ipp:A (2.2) BS02 dna 3.1.-.- GO:0004519 ... Q94702 9665136
    22721 1ipp:B (2.2) BS01 dna 3.1.-.- GO:0004519 ... Q94702 9665136
    22722 1ipp:B (2.2) BS02 dna 3.1.-.- GO:0004519 ... Q94702 9665136
    22723 1ips:A (2.5) BS01 MN 1.21.3.1 GO:0005506 ... P05326 7791906
    22724 1ips:A (2.5) BS02 MN 1.21.3.1 GO:0005506 ... P05326 7791906
    22725 1ips:B (2.5) BS01 MN 1.21.3.1 GO:0005506 ... P05326 7791906
    22726 1ipw:A (2.3) BS01 MG 3.6.1.1 GO:0000287 ... P0A7A9 8664256
    22727 1ipw:B (2.3) BS01 MG 3.6.1.1 GO:0000287 ... P0A7A9 8664256
    22728 1iq1:C (2.8) BS01 peptide ? GO:0005737 ... P52293 11448961
    22729 1iq1:C (2.8) BS02 peptide ? GO:0005737 ... P52293 11448961
    22730 1iq3:A (-1.00) BS01 CA ? GO:0005509 ... Q8NFH8 9928989
    22731 1iq5:A (1.8) BS01 peptide ? GO:0005102 ... P0DP33 11545585
    22732 1iq5:A (1.8) BS02 CA ? GO:0005102 ... P0DP33 11545585
    22733 1iq5:A (1.8) BS03 CA ? GO:0005102 ... P0DP33 11545585
    22734 1iq5:A (1.8) BS04 CA ? GO:0005102 ... P0DP33 11545585
    22735 1iq5:A (1.8) BS05 CA ? GO:0005102 ... P0DP33 11545585
    22736 1iq7:A (2.3) BS01 SO4 ? GO:0005576 ... P02789 11466309
    22737 1iq8:A (2.2) BS01 ZN 2.4.2.48 GO:0002099 ... O58843 12054814
    22738 1iq8:A (2.2) BS02 MG 2.4.2.48 GO:0002099 ... O58843 12054814
    22739 1iq8:B (2.2) BS01 ZN 2.4.2.48 GO:0002099 ... O58843 12054814
    22740 1iq8:B (2.2) BS02 MG 2.4.2.48 GO:0002099 ... O58843 12054814
    22741 1iqc:A (1.8) BS01 CA 1.11.1.5 GO:0004130 ... P55929 11695895
    22742 1iqc:A (1.8) BS02 CA 1.11.1.5 GO:0004130 ... P55929 11695895
    22743 1iqc:A (1.8) BS03 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22744 1iqc:A (1.8) BS04 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22745 1iqc:B (1.8) BS01 CA 1.11.1.5 GO:0004130 ... P55929 11695895
    22746 1iqc:B (1.8) BS02 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22747 1iqc:B (1.8) BS03 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22748 1iqc:C (1.8) BS01 CA 1.11.1.5 GO:0004130 ... P55929 11695895
    22749 1iqc:C (1.8) BS02 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22750 1iqc:C (1.8) BS03 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22751 1iqc:D (1.8) BS01 CA 1.11.1.5 GO:0004130 ... P55929 11695895
    22752 1iqc:D (1.8) BS02 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22753 1iqc:D (1.8) BS03 HEC 1.11.1.5 GO:0004130 ... P55929 11695895
    22754 1iqe:A (2.9) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22755 1iqe:A (2.9) BS02 XMB 3.4.21.6 GO:0004252 ... P00742 N/A
    22756 1iqf:A (3.2) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22757 1iqf:A (3.2) BS02 XMD 3.4.21.6 GO:0004252 ... P00742 N/A
    22758 1iqg:A (2.6) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22759 1iqg:A (2.6) BS02 XME 3.4.21.6 GO:0004252 ... P00742 N/A
    22760 1iqh:A (3.0) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22761 1iqh:A (3.0) BS02 XMF 3.4.21.6 GO:0004252 ... P00742 N/A
    22762 1iqi:A (2.9) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22763 1iqi:A (2.9) BS02 XMG 3.4.21.6 GO:0004252 ... P00742 N/A
    22764 1iqj:A (3.0) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22765 1iqj:A (3.0) BS02 XMH 3.4.21.6 GO:0004252 ... P00742 N/A
    22766 1iqk:A (3.2) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22767 1iqk:A (3.2) BS02 XMI 3.4.21.6 GO:0004252 ... P00742 N/A
    22768 1iql:A (2.7) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22769 1iql:A (2.7) BS02 XMJ 3.4.21.6 GO:0004252 ... P00742 N/A
    22770 1iqm:A (2.6) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22771 1iqm:A (2.6) BS02 XMK 3.4.21.6 GO:0004252 ... P00742 N/A
    22772 1iqn:A (2.6) BS01 CA 3.4.21.6 GO:0004252 ... P00742 N/A
    22773 1iqn:A (2.6) BS02 XMC 3.4.21.6 GO:0004252 ... P00742 N/A
    22774 1iqp:A (2.8) BS01 ADP ? GO:0003677 ... Q8U4J3 11545747
    22775 1iqp:B (2.8) BS01 ADP ? GO:0003677 ... Q8U4J3 11545747
    22776 1iqp:C (2.8) BS01 ADP ? GO:0003677 ... Q8U4J3 11545747
    22777 1iqp:E (2.8) BS01 ADP ? GO:0003677 ... Q8U4J3 11545747
    22778 1iqr:A (2.1) BS01 FAD 4.1.99.3 GO:0003677 ... P61497 11707580
    22779 1iqu:A (2.2) BS01 TDR 4.1.99.3 GO:0003677 ... P61497 11707580
    22780 1iqu:A (2.2) BS02 FAD 4.1.99.3 GO:0003677 ... P61497 11707580
    22781 1iqx:A (2.0) BS01 CO 1.4.3.21 GO:0005507 ... P46881 12537504
    22782 1iqx:B (2.0) BS01 CO 1.4.3.21 GO:0005507 ... P46881 12537504
    22783 1iqz:A (0.92) BS01 SF4 ? GO:0005506 ... P10245 11827483
    22784 1ir0:A (1.0) BS01 SF4 ? GO:0005506 ... P10245 11827483
    22785 1ir1:A (1.8) BS01 MG 4.1.1.39 GO:0000287 ... P00875 11866526
    22786 1ir1:A (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... P00875 11866526
    22787 1ir1:B (1.8) BS01 MG 4.1.1.39 GO:0000287 ... P00875 11866526
    22788 1ir1:B (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... P00875 11866526
    22789 1ir1:C (1.8) BS01 MG 4.1.1.39 GO:0000287 ... P00875 11866526
    22790 1ir1:C (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... P00875 11866526
    22791 1ir1:D (1.8) BS01 MG 4.1.1.39 GO:0000287 ... P00875 11866526
    22792 1ir1:D (1.8) BS02 CAP 4.1.1.39 GO:0000287 ... P00875 11866526
    22793 1ir2:A (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22794 1ir2:A (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22795 1ir2:A (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22796 1ir2:B (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22797 1ir2:B (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22798 1ir2:B (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22799 1ir2:C (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22800 1ir2:C (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).