SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    244201 4lfz:XG (3.92) BS01 rna ? GO:0000049 ... P17291 25128388
    244202 4lfz:XH (3.92) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    244203 4lfz:XI (3.92) BS01 rna ? GO:0003723 ... P80374 25128388
    244204 4lfz:XI (3.92) BS02 rna ? GO:0003723 ... P80374 25128388
    244205 4lfz:XJ (3.92) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    244206 4lfz:XK (3.92) BS01 rna ? GO:0003735 ... P80376 25128388
    244207 4lfz:XL (3.92) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    244208 4lfz:XL (3.92) BS02 MG ? GO:0000049 ... Q5SHN3 25128388
    244209 4lfz:XM (3.92) BS01 rna ? GO:0000049 ... P80377 25128388
    244210 4lfz:XM (3.92) BS02 rna ? GO:0000049 ... P80377 25128388
    244211 4lfz:XM (3.92) BS03 MG ? GO:0000049 ... P80377 25128388
    244212 4lfz:XM (3.92) BS04 MG ? GO:0000049 ... P80377 25128388
    244213 4lfz:XN (3.92) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    244214 4lfz:XN (3.92) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    244215 4lfz:XO (3.92) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    244216 4lfz:XO (3.92) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    244217 4lfz:XP (3.92) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    244218 4lfz:XQ (3.92) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    244219 4lfz:XR (3.92) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    244220 4lfz:XS (3.92) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    244221 4lfz:XT (3.92) BS01 rna ? GO:0003723 ... P80380 25128388
    244222 4lfz:Y0 (3.92) BS01 rna ? GO:0003735 ... P60493 25128388
    244223 4lfz:Y0 (3.92) BS02 rna ? GO:0003735 ... P60493 25128388
    244224 4lfz:Y0 (3.92) BS03 rna ? GO:0003735 ... P60493 25128388
    244225 4lfz:Y1 (3.92) BS01 rna ? GO:0003735 ... P60494 25128388
    244226 4lfz:Y2 (3.92) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    244227 4lfz:Y3 (3.92) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    244228 4lfz:Y3 (3.92) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    244229 4lfz:Y4 (3.92) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    244230 4lfz:Y5 (3.92) BS01 rna ? GO:0003735 ... P80339 25128388
    244231 4lfz:Y6 (3.92) BS01 rna ? GO:0003735 ... P35871 25128388
    244232 4lfz:Y7 (3.92) BS01 rna ? GO:0003735 ... P80340 25128388
    244233 4lfz:Y8 (3.92) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    244234 4lfz:Y9 (3.92) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    244235 4lfz:Y9 (3.92) BS02 ZN ? GO:0003735 ... Q5SHR2 25128388
    244236 4lfz:YD (3.92) BS01 rna ? GO:0002181 ... P60405 25128388
    244237 4lfz:YE (3.92) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    244238 4lfz:YF (3.92) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    244239 4lfz:YG (3.92) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    244240 4lfz:YG (3.92) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    244241 4lfz:YH (3.92) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    244242 4lfz:YI (3.92) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    244243 4lfz:YI (3.92) BS02 rna ? GO:0003735 ... Q5SLQ1 25128388
    244244 4lfz:YN (3.92) BS01 rna ? GO:0003729 ... P60488 25128388
    244245 4lfz:YO (3.92) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    244246 4lfz:YO (3.92) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    244247 4lfz:YP (3.92) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    244248 4lfz:YP (3.92) BS02 MG ? GO:0003735 ... Q5SHQ7 25128388
    244249 4lfz:YQ (3.92) BS01 rna ? GO:0003735 ... P60489 25128388
    244250 4lfz:YQ (3.92) BS02 rna ? GO:0003735 ... P60489 25128388
    244251 4lfz:YR (3.92) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    244252 4lfz:YS (3.92) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    244253 4lfz:YS (3.92) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    244254 4lfz:YT (3.92) BS01 rna ? GO:0003735 ... P60490 25128388
    244255 4lfz:YT (3.92) BS02 rna ? GO:0003735 ... P60490 25128388
    244256 4lfz:YU (3.92) BS01 rna ? GO:0000027 ... P60491 25128388
    244257 4lfz:YV (3.92) BS01 rna ? GO:0003723 ... P60492 25128388
    244258 4lfz:YW (3.92) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    244259 4lfz:YX (3.92) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    244260 4lfz:YY (3.92) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    244261 4lfz:YZ (3.92) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    244262 4lfz:YZ (3.92) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    244263 4lg0:A (2.19) BS01 dna ? GO:0003700 ... Q12778 N/A
    244264 4lg0:A (2.19) BS02 dna ? GO:0003700 ... Q12778 N/A
    244265 4lg0:A (2.19) BS03 CA ? GO:0003700 ... Q12778 N/A
    244266 4lg0:B (2.19) BS01 dna ? GO:0003700 ... P14921 N/A
    244267 4lg0:B (2.19) BS02 dna ? GO:0003700 ... P14921 N/A
    244268 4lg1:A (1.8) BS01 SAM 2.1.1.- GO:0005515 ... Q9H867 N/A
    244269 4lg1:B (1.8) BS01 SAM 2.1.1.- GO:0005515 ... Q9H867 N/A
    244270 4lg1:C (1.8) BS01 SAM 2.1.1.- GO:0005515 ... Q9H867 N/A
    244271 4lg2:A (2.7) BS01 rna ? N/A Q8JPY0 23824825
    244272 4lg2:D (2.7) BS01 rna ? N/A Q8JPY0 23824825
    244273 4lg2:D (2.7) BS02 rna ? N/A Q8JPY0 23824825
    244274 4lg5:A (2.88) BS01 A1O ? GO:0004864 ... O80992 23835477
    244275 4lg5:B (2.88) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 23835477
    244276 4lg5:B (2.88) BS02 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 23835477
    244277 4lg5:B (2.88) BS03 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 23835477
    244278 4lg6:A (1.8) BS01 peptide ? N/A Q9H9E1 25752541
    244279 4lg7:A (2.5) BS01 dna 3.2.2.- GO:0003677 ... O95243 N/A
    244280 4lg7:A (2.5) BS02 dna 3.2.2.- GO:0003677 ... O95243 N/A
    244281 4lga:A (2.7) BS01 A2O ? GO:0004864 ... O80992 23835477
    244282 4lga:B (2.7) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 23835477
    244283 4lgb:A (3.15) BS01 1W7 ? GO:0004864 ... O80992 23835477
    244284 4lgb:B (3.15) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 23835477
    244285 4lgd:A (3.05) BS01 peptide 2.7.11.1 GO:0004672 ... Q13188 23972470
    244286 4lgd:A (3.05) BS02 ANP 2.7.11.1 GO:0004672 ... Q13188 23972470
    244287 4lgd:B (3.05) BS01 peptide 2.7.11.1 GO:0004672 ... Q13188 23972470
    244288 4lgd:B (3.05) BS02 ANP 2.7.11.1 GO:0004672 ... Q13188 23972470
    244289 4lgd:C (3.05) BS01 ANP 2.7.11.1 GO:0004672 ... Q13188 23972470
    244290 4lgd:D (3.05) BS01 ANP 2.7.11.1 GO:0004672 ... Q13188 23972470
    244291 4lge:A (1.55) BS01 ZN 2.3.2.27 N/A Q13490 23928071
    244292 4lge:A (1.55) BS02 1Y0 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=3.5nM
    244293 4lge:B (1.55) BS01 ZN 2.3.2.27 N/A Q13490 23928071
    244294 4lge:B (1.55) BS02 1Y0 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=3.5nM
    244295 4lgg:A (2.41) BS01 VGG 2.7.10.2 GO:0004672 ... P00523 23841803 MOAD: ic50=3nM
    244296 4lgg:B (2.41) BS01 VGG 2.7.10.2 GO:0004672 ... P00523 23841803 MOAD: ic50=3nM
    244297 4lgh:A (2.84) BS01 0JN 2.7.10.2 GO:0004672 ... P00523 23841803 BindingDB: IC50=620nM
    244298 4lgh:B (2.84) BS01 0JN 2.7.10.2 GO:0004672 ... P00523 23841803 BindingDB: IC50=620nM
    244299 4lgj:A (1.55) BS01 ZN ? N/A Q8X834 24419377
    244300 4lgk:A (1.96) BS01 AU 3.2.1.17 GO:0003796 ... P00698 24045294
    244301 4lgr:A (1.65) BS01 ZN 3.2.2.22 GO:0017148 ... P02879 24907552
    244302 4lgr:B (1.65) BS01 ZN N/A N/A N/A 24907552
    244303 4lgt:A (1.3) BS01 rna 5.4.99.22 GO:0001522 ... P37765 24214967
    244304 4lgt:A (1.3) BS02 rna 5.4.99.22 GO:0001522 ... P37765 24214967
    244305 4lgt:D (1.3) BS01 rna 5.4.99.22 GO:0001522 ... P37765 24214967
    244306 4lgt:D (1.3) BS02 rna 5.4.99.22 GO:0001522 ... P37765 24214967
    244307 4lgu:A (2.0) BS01 ZN 2.3.2.27 N/A Q13490 23928071
    244308 4lgu:A (2.0) BS02 1YH 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=2.1nM
    244309 4lgu:B (2.0) BS01 ZN 2.3.2.27 N/A Q13490 23928071
    244310 4lgu:B (2.0) BS02 1YH 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=2.1nM
    244311 4lgy:A (1.48) BS01 ADP 6.3.5.3 GO:0004642 ... P74881 24223728
    244312 4lgy:A (1.48) BS02 MG 6.3.5.3 GO:0004642 ... P74881 24223728
    244313 4lgy:A (1.48) BS03 MG 6.3.5.3 GO:0004642 ... P74881 24223728
    244314 4lgy:A (1.48) BS04 MG 6.3.5.3 GO:0004642 ... P74881 24223728
    244315 4lgy:A (1.48) BS05 MG 6.3.5.3 GO:0004642 ... P74881 24223728
    244316 4lh0:A (1.674) BS01 GLV 1.2.1.88 GO:0003842 ... Q8CHT0 23928095
    244317 4lh0:B (1.674) BS01 GLV 1.2.1.88 GO:0003842 ... Q8CHT0 23928095
    244318 4lh3:A (1.813) BS01 GUA 1.2.1.88 GO:0003842 ... Q8CHT0 23928095 MOAD: Ki=30mM
    244319 4lh3:B (1.813) BS01 GUA 1.2.1.88 GO:0003842 ... Q8CHT0 23928095 MOAD: Ki=30mM
    244320 4lh4:A (1.8) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24261564
    244321 4lh5:A (2.19) BS01 LF0 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24261564 MOAD: ic50=0.23uM
    244322 4lh5:A (2.19) BS02 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24261564
    244323 4lh6:A (1.65) BS01 1X7 6.5.1.2 GO:0003911 ... Q837V6 24287382 MOAD: ic50=77uM
    244324 4lh6:A (1.65) BS02 NMN 6.5.1.2 GO:0003911 ... Q837V6 24287382
    244325 4lh7:A (1.9) BS01 1X8 6.5.1.2 GO:0003911 ... Q837V6 24287382 MOAD: ic50=34uM
    244326 4lh7:A (1.9) BS02 NMN 6.5.1.2 GO:0003911 ... Q837V6 24287382
    244327 4lh8:A (1.8) BS01 ZN 3.8.1.8 GO:0004040 ... Q6SJY7 24771025
    244328 4lh8:B (1.8) BS01 ZN 3.8.1.8 GO:0004040 ... Q6SJY7 24771025
    244329 4lhc:A (1.899) BS01 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244330 4lhc:A (1.899) BS02 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244331 4lhc:A (1.899) BS03 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244332 4lhc:A (1.899) BS04 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244333 4lhc:A (1.899) BS05 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244334 4lhc:A (1.899) BS06 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244335 4lhc:A (1.899) BS07 PO4 1.4.4.2 GO:0004375 ... P74416 24121504
    244336 4lhc:B (1.899) BS01 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244337 4lhc:B (1.899) BS02 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244338 4lhc:B (1.899) BS03 PO4 1.4.4.2 GO:0004375 ... P74416 24121504
    244339 4lhc:B (1.899) BS04 PO4 1.4.4.2 GO:0004375 ... P74416 24121504
    244340 4lhd:A (1.7959) BS01 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244341 4lhd:A (1.7959) BS02 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244342 4lhd:A (1.7959) BS03 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244343 4lhd:A (1.7959) BS04 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244344 4lhd:A (1.7959) BS05 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244345 4lhd:A (1.7959) BS06 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244346 4lhd:A (1.7959) BS07 PO4 1.4.4.2 GO:0004375 ... P74416 24121504
    244347 4lhd:B (1.7959) BS01 GLY 1.4.4.2 GO:0004375 ... P74416 24121504
    244348 4lhd:B (1.7959) BS02 BCT 1.4.4.2 GO:0004375 ... P74416 24121504
    244349 4lhd:B (1.7959) BS03 PO4 1.4.4.2 GO:0004375 ... P74416 24121504
    244350 4lhh:A (1.73) BS01 1TZ 3.4.23.22 GO:0004190 ... P11838 24532096 MOAD: Ki=6uM
    244351 4lhi:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    244352 4lhi:A (1.6) BS02 WWL 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    244353 4lhk:A (1.73) BS01 MAN ? N/A B3IUB3 25873380
    244354 4lhk:A (1.73) BS02 MAN ? N/A B3IUB3 25873380
    244355 4lhk:A (1.73) BS03 CA ? N/A B3IUB3 25873380
    244356 4lhk:B (1.73) BS01 MAN ? N/A B3IUB3 25873380
    244357 4lhk:B (1.73) BS02 MAN ? N/A B3IUB3 25873380
    244358 4lhk:B (1.73) BS03 CA ? N/A B3IUB3 25873380
    244359 4lhm:A (1.52) BS01 SO4 2.4.2.4 GO:0004645 ... P07650 24699659
    244360 4lhm:A (1.52) BS02 SO4 2.4.2.4 GO:0004645 ... P07650 24699659
    244361 4lhm:A (1.52) BS03 SO4 2.4.2.4 GO:0004645 ... P07650 24699659
    244362 4lhm:A (1.52) BS04 SO4 2.4.2.4 GO:0004645 ... P07650 24699659
    244363 4lhm:A (1.52) BS05 SO4 2.4.2.4 GO:0004645 ... P07650 24699659
    244364 4lhm:A (1.52) BS06 AZZ 2.4.2.4 GO:0004645 ... P07650 24699659 MOAD: Ki=0.68mM
    244365 4lhn:A (2.12) BS01 MAN ? N/A P32768 25873380
    244366 4lhn:A (2.12) BS02 CA ? N/A P32768 25873380
    244367 4lho:A (2.224) BS01 PR6 4.1.1.- N/A F2Z288 23781927
    244368 4lho:B (2.224) BS01 PR6 4.1.1.- N/A F2Z288 23781927
    244369 4lho:C (2.224) BS01 PR6 4.1.1.- N/A F2Z288 23781927
    244370 4lho:D (2.224) BS01 PR6 4.1.1.- N/A F2Z288 23781927
    244371 4lho:E (2.224) BS01 PR6 4.1.1.- N/A F2Z288 23781927
    244372 4lht:A (2.137) BS01 HEM 1.14.14.133 GO:0004497 ... Q8VQF6 23829586
    244373 4lht:B (2.137) BS01 HEM 1.14.14.133 GO:0004497 ... Q8VQF6 23829586
    244374 4lht:B (2.137) BS02 CNL 1.14.14.133 GO:0004497 ... Q8VQF6 23829586 MOAD: Kd=161uM
    244375 4lhu:A (2.87) BS01 JLS ? N/A P15813 24076636
    244376 4lhu:G (2.87) BS01 JLS ? N/A P0CF51 24076636
    244377 4lhv:A (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244378 4lhv:B (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244379 4lhv:B (1.95) BS02 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244380 4lhv:C (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244381 4lhv:D (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244382 4lhv:D (1.95) BS02 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244383 4lhv:E (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244384 4lhw:A (1.55) BS01 MG 3.6.5.2 GO:0003924 ... P61006 24072714
    244385 4lhw:A (1.55) BS02 GNP 3.6.5.2 GO:0003924 ... P61006 24072714
    244386 4lhw:B (1.55) BS01 MG 3.6.5.2 GO:0003924 ... P61006 24072714
    244387 4lhw:B (1.55) BS02 GNP 3.6.5.2 GO:0003924 ... P61006 24072714
    244388 4lhw:C (1.55) BS01 MG 3.6.5.2 GO:0003924 ... P61006 24072714
    244389 4lhw:C (1.55) BS02 GNP 3.6.5.2 GO:0003924 ... P61006 24072714
    244390 4lhw:D (1.55) BS01 MG 3.6.5.2 GO:0003924 ... P61006 24072714
    244391 4lhw:D (1.55) BS02 GNP 3.6.5.2 GO:0003924 ... P61006 24072714
    244392 4lhw:E (1.55) BS01 MG 3.6.5.2 GO:0003924 ... P61006 24072714
    244393 4lhw:E (1.55) BS02 GNP 3.6.5.2 GO:0003924 ... P61006 24072714
    244394 4lhy:A (3.1) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244395 4lhy:B (3.1) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244396 4lhz:A (3.2) BS01 GTP 3.6.5.2 GO:0003924 ... P61006 24072714
    244397 4lhz:B (3.2) BS01 GTP 3.6.5.2 GO:0003924 ... P61006 24072714
    244398 4li0:A (3.3) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244399 4li0:B (3.3) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714
    244400 4li3:X (2.592) BS01 peptide 2.5.1.47 GO:0003824 ... P45040 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).